Pregenerated sensors for ZFP267 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033883Ensembl transcript IDs: ENSMUST00000165956.3, ENSMUST00000197653.5
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGCAGAAGCCAGAGGCCTCGAACCACACCAATGGCTCTTGGAATaGACGTTTGCAAGTAGAGCTGTTTGGGCAAAAGGACACACTGTG | + |
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Preference number: 1 (lower is better) Translates to: VAEARGLEPHQWLLE*TFASRAVWAKGHTV Trigger: CACAGTGTGTCCTTTTGCCCAAACAGCTCTACTTGCAAACGTTCATTCCAAGAGCCATTGGTGTGGTTCGAGGCCTCTGGCTTCTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR CCA 90 bp | CGGATGAACCGAGTTCAACAACACGAAATGACAGAGAGAATGGGCTaGAAGCCGTCCTCTGACTCTCACATGAATGCTGTGGCACACAAC | + |
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Preference number: 1 (lower is better) Translates to: RMNRVQQHEMTERMG*KPSSDSHMNAVAHN Trigger: GTTGTGTGCCACAGCATTCATGTGAGAGTCAGAGGACGGCTTCCAGCCCATTCTCTCTGTCATTTCGTGTTGTTGAACTCGGTTCATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 90 bp | AATTGCCCAGATCAGAGTGGCCTATGGCCATGTCTGGAATGGTTTTaGCTGTTGACTAATGTGGTCTGCTGTAGACAAGTGCCACCCATA | + |
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Preference number: 1 (lower is better) Translates to: NCPDQSGLWPCLEWF*LLTNVVCCRQVPPI Trigger: TATGGGTGGCACTTGTCTACAGCAGACCACATTAGTCAACAGTCAAAACCATTCCAGACATGGCCATAGGCCACTCTGATCTGGGCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR GCA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTaGCAAAGACTTCTCCAGTGTGGCGCCCGCTGTACACTTTTATGT | + |
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Preference number: 1 (lower is better) Translates to: KLYATQFSCVNPRET*QRLLQCGARCTLLC Trigger: ACATAAAAGTGTACAGCGGGCGCCACACTGGAGAAGTCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR GCA 90 bp | TCACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTaGACTCACCATCAGGATTCTAACACAGCCACATCTCACTTGACA | + |
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Preference number: 1 (lower is better) Translates to: SHQSMMSVLLCPYRF*THHQDSNTATSHLT Trigger: TGTCAAGTGAGATGTGGCTGTGTTAGAATCCTGATGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR GCA 90 bp | TCTTCTGACAATGCATCACATCAGAGTATGATGTCAGTGCTTCTCTaGCCTTACAGATTCTGCACTCACCATCAGGATTCTAACACAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSDNASHQSMMSVLL*PYRFCTHHQDSNTA Trigger: GGCTGTGTTAGAATCCTGATGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGTGATGCATTGTCAGAAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 90 bp | GATTCTGCACTCACCATCAGGATTCTAACACAGCCACATCTCACTTaGCATGATCTGAAGAACTTACCCCAGAAGGCCTTTAGCTTTATG | + |
|
Preference number: 1 (lower is better) Translates to: DSALTIRILTQPHLT*HDLKNLPQKAFSFM Trigger: CATAAAGCTAAAGGCCTTCTGGGGTAAGTTCTTCAGATCATGTCAAGTGAGATGTGGCTGTGTTAGAATCCTGATGGTGAGTGCAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 90 bp | ATCATTATCATCCTCTCTCTTCTGACAATGCATCACATCAGAGTATaGTGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCATC | + |
|
Preference number: 1 (lower is better) Translates to: IIIILSLLTMHHIRV*CQCFSALTDSALTI Trigger: GATGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGTGATGCATTGTCAGAAGAGAGAGGATGATAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 90 bp | TTATCCACTTGCTTTGCATTGAAGTTTTCTAGAAGTTTCCAGCCATaGGTGCCTTGTGATTGTTTTGTTGCCTTGGAAGAGCTATGTGAA | + |
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Preference number: 1 (lower is better) Translates to: LSTCFALKFSRSFQP*VPCDCFVALEELCE Trigger: TTCACATAGCTCTTCCAAGGCAACAAAACAATCACAAGGCACTCATGGCTGGAAACTTCTAGAAAACTTCAATGCAAAGCAAGTGGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR CAA 90 bp | CCCCACAGCCTGAGGGAGTTCATGAGCTGGCTGCAGTTGCTCCTCTaGGTCCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGG | + |
|
Preference number: 2 (lower is better) Translates to: PHSLREFMSWLQLLL*VLLFLSQSTWYTYW Trigger: CCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGGACCAAGAGGAGCAACTGCAGCCAGCTCATGAACTCCCTCAGGCTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR GCA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGGAGGGAGTGAGGAATTaGCCAGATCAGAGTGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLEGVRN*PDQSGL Trigger: TAGGCCACTCTGATCTGGGCAATTCCTCACTCCCTC...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | ACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCACCTCTGACTCTCACATaGATGCTGTGGCACACAACA | + |
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Preference number: 2 (lower is better) Translates to: TSEYDVSASLPLQILHSPPLTLT*MLWHTT Trigger: TGTTGTGTGCCACAGCATTCATGTGAGAGTCAGAGG...TGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR CAA 90 bp | GCTGCAGTTGCTCCTCTTGGTCCTACTCTTTCTGTCCCAGAGTACTaGGTACACCTATTGGCAATCTTTCCACTGATGTCTTATACACTC | + |
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Preference number: 2 (lower is better) Translates to: AAVAPLGPTLSVPEY*VHLLAIFPLMSYTL Trigger: GAGTGTATAAGACATCAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGGACCAAGAGGAGCAACTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAAGCTGTTCCACAACTCTaGACTAGATGCTGCTTATCT | + |
|
Preference number: 2 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQAVPQL*TRCCLS Trigger: AGATAAGCAGCATCTAGTTCAGAGTTGTGGAACAGC...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAAATGTCAGTGCTTCTCTaGCCTTACAGATTCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQMSVLL*PYRFCT Trigger: AGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACAT...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCCCAAATTCAAATGTGTCAATCACTGTGTTCCTCCTTGGTGTTGATCAACTGGAAGCCGTCCTCTaGCTCTCACATGAATGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TFPNSNVSITVFLLGVDQLEAVL*LSHECC Trigger: ACAGCATTCATGTGAGAGTCAGAGGACGGCTTCCAG...TTGATCAACACCAAGGAGGAACACAGTGATTGACACATTTGAATTTGGGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAATACAGTCCCATGAAATaGAAGAAGGTTGGCATATGG | + |
|
Preference number: 2 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQYSPMK*KKVGIW Trigger: CCATATGCCAACCTTCTTCCATTTCATGGGACTGTA...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGTGTCTGGAATGGTTTTaGCTGTTGACTAATGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLCLEWF*LLTNVV Trigger: GACCACATTAGTCAACAGTCAAAACCATTCCAGACA...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCTTGCCCAGATCAGAGTaGCCTATGGCCATGTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HANYQFSKQMFLVLSGSCLPRSE*PMAMSG Trigger: TCCAGACATGGCCATAGGCCACTCTGATCTGGGCAA...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCCCTCTGACTCTCACATaGATGCTGTGGCACACAACA | + |
|
Preference number: 2 (lower is better) Translates to: HANYQFSKQMFLVLSGSCPLTLT*MLWHTT Trigger: TGTTGTGTGCCACAGCATTCATGTGAGAGTCAGAGG...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGTTCAACAACACGAAATaGCAGAGAGAATGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SCLQVTGRLYALWCNCSRFNNTK*QREWAG Trigger: TCCAGCCCATTCTCTCTGTCATTTCGTGTTGTTGAA...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCGCCATGAGTGCCTTGTaGTTGTTTTGTTGCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: HANYQFSKQMFLVLSGSCAMSAL*LFCCLG Trigger: TCCAAGGCAACAAAACAATCACAAGGCACTCATGGC...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCCCAAATTCAAATGTGTCAATCACTGTGTTCCTCCTTGGTGTTGATCAAAAACCCCTAAGTACTTaGCAGGTACTACATGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TFPNSNVSITVFLLGVDQKPLST*QVLHAV Trigger: CACTGCATGTAGTACCTGGCAAGTACTTAGGGGTTT...TTGATCAACACCAAGGAGGAACACAGTGATTGACACATTTGAATTTGGGAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCTCATCCTCTCTCTTCTaGCAATGCATCACATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HANYQFSKQMFLVLSGSCSSSLF*QCITSE Trigger: CTCTGATGTGATGCATTGTCAGAAGAGAGAGGATGA...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCGCTGTTCCACAACTCTaGACTAGATGCTGCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: HANYQFSKQMFLVLSGSCAVPQL*TRCCLS Trigger: AGATAAGCAGCATCTAGTTCAGAGTTGTGGAACAGC...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR CAA 90 bp | CCAGCCCCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTaGGGAAATACATCTGAGAATACAACTATTAACACAGAACCGGTT | + |
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Preference number: 2 (lower is better) Translates to: PAPSVYVLCIQSEQS*GNTSENTTINTEPV Trigger: AACCGGTTCTGTGTTAATAGTTGTATTCTCAGATGTATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGGGGCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCACAAAAATGCTTCCATaGAGGAATTCTGCACCATAC | + |
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Preference number: 2 (lower is better) Translates to: HANYQFSKQMFLVLSGSCTKMLP*RNSAPY Trigger: GTATGGTGCAGAATTCCTTCATGGAAGCATTTTTGT...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR GCA 90 bp | ATATGGTCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTGTGGATTCAGCATaGACCATCTATATATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: IWSCLQVTGRLYALWCNCSVDSA*TIYIFA Trigger: TGCAAATATATAGATGGTGCATGCTGAATCCACACT...ACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGACCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCTGTGAAACTGTGAGCTaGAGTCTTCATAATCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: HANYQFSKQMFLVLSGSCCETVS*SLHNLC Trigger: GCAAAGATTATGAAGACTCCAGCTCACAGTTTCACA...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGAAATCCAGTTAGGTATTaGAACAGAAAGTACCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: KLYATQFSCVNPRETCQRNPVRY*NRKYLL Trigger: CAAAAGGTACTTTCTGTTGCAATACCTAACTGGATT...TCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCCCAAATTCAAATGTGTCAATCACTGTGTTCCTCCTTGGTGTTGATCAAAATCCAGTTAGGTATTaGAACAGAAAGTACCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TFPNSNVSITVFLLGVDQNPVRY*NRKYLL Trigger: CAAAAGGTACTTTCTGTTGCAATACCTAACTGGATT...TTGATCAACACCAAGGAGGAACACAGTGATTGACACATTTGAATTTGGGAAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | GGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCCCAGTGTGTATGTTTTA | + |
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Preference number: 3 (lower is better) Translates to: GPSEEQSGALTH*AISPAPSVYVL Trigger: TAAAACATACACACTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | CGAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TLDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | CGAAATGACAGAGAGAATGGGCTGGAAGCCGTCCTCTaGCTCTCACATGAATGCTGTGGCACACAACACCCC | + |
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Preference number: 3 (lower is better) Translates to: RNDRENGLEAVL*LSHECCGTQHP Trigger: GGGGTGTTGTGTGCCACAGCATTCATGTGAGAGTCAGAGGACGGCTTCCAGCCCATTCTCTCTGTCATTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | AGATACCTGAGAGAAGCCATGGGGAGGATCCAGCATTaGTGGTGTAGCAGAAGCCAGAGGCCTCGAACCACA | + |
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Preference number: 3 (lower is better) Translates to: RYLREAMGRIQH*WCSRSQRPRTT Trigger: TGTGGTTCGAGGCCTCTGGCTTCTGCTACACCATCAATGCTGGATCCTCCCCATGGCTTCTCTCAGGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | GGCGGGTCCTGTAGATCCAAAGCTGCAGGATCTCCATaGCACAGGGCAACAAGAAGATACCTGAGAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: GGSCRSKAAGSP*HRATRRYLREA Trigger: GGCTTCTCTCAGGTATCTTCTTGTTGCCCTGTGTCATGGAGATCCTGCAGCTTTGGATCTACAGGACCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR GCA 72 bp | GGGAAAGTGAGAGTCTCAATTGAGGGAGTGAGGAATTaGCCAGATCAGAGTGGCCTATGGCCATGTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: GKVRVSIEGVRN*PDQSGLWPCLE Trigger: TTCCAGACATGGCCATAGGCCACTCTGATCTGGGCAATTCCTCACTCCCTCAATTGAGACTCTCACTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR CCA 72 bp | CTCATTTCGAATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LISNGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTCGAAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR CCA 72 bp | CAGAAGCCAGAGGCCTCGAACCACACCAATGGCTCTTaGAATGAACGTTTGCAAGTAGAGCTGTTTGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: QKPEASNHTNGS*NERLQVELFGQ Trigger: TTGCCCAAACAGCTCTACTTGCAAACGTTCATTCCAAGAGCCATTGGTGTGGTTCGAGGCCTCTGGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | GTGGCCTATGGCCATGTCTGGAATGGTTTTGACTGTTaGCTAATGTGGTCTGCTGTAGACAAGTGCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: VAYGHVWNGFDC*LMWSAVDKCHP Trigger: TGGGTGGCACTTGTCTACAGCAGACCACATTAGTCAACAGTCAAAACCATTCCAGACATGGCCATAGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR GCA 72 bp | GATCTCATTTCGAATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLISNGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTCGAAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR GCA 72 bp | GCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTaGCAAAGACTTCTCCAGTGTGGCGCCCGCTGTACA | + |
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Preference number: 3 (lower is better) Translates to: ATQFSCVNPRET*QRLLQCGARCT Trigger: TGTACAGCGGGCGCCACACTGGAGAAGTCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | GATCAGAGTGGCCTATGGCCATGTCTGGAATGGTTTTaGCTGTTGACTAATGTGGTCTGCTGTAGACAAGTG | + |
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Preference number: 3 (lower is better) Translates to: DQSGLWPCLEWF*LLTNVVCCRQV Trigger: CACTTGTCTACAGCAGACCACATTAGTCAACAGTCAAAACCATTCCAGACATGGCCATAGGCCACTCTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | TCAAGTGGTATTGTAGAACCCCAGTCTAAGGAATTGTaGCTCTGTGAGTTTGGTGGAACTAGAGGGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: SSGIVEPQSKEL*LCEFGGTRGGT Trigger: AGTGCCCCCTCTAGTTCCACCAAACTCACAGAGTCACAATTCCTTAGACTGGGGTTCTACAATACCACTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR TCA 72 bp | TCAGTTCTTGCCTTTCACCATGTAGGTCTTGGGGATTaGACTCAAATTGCTAGGTCGGCAGCAGGTACCTTT | + |
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Preference number: 3 (lower is better) Translates to: SVLAFHHVGLGD*TQIARSAAGTF Trigger: AAAGGTACCTGCTGCCGACCTAGCAATTTGAGTTCAATCCCCAAGACCTACATGGTGAAAGGCAAGAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAATCACTGTGTTCCTCCTaGGTGTTGATCAAATCATAC | + |
|
Preference number: 3 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQSLCSS*VLIKSY Trigger: GTATGATTTGATCAACACCAAGGAGGAACACAGTGA...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR TCA 72 bp | CCCGTATATAGCTTACAGGCGGCTGTTCCACAACTCTaGACTAGATGCTGCTTATCTCCCATCATTATCATC | + |
|
Preference number: 3 (lower is better) Translates to: PVYSLQAAVPQL*TRCCLSPIIII Trigger: GATGATAATGATGGGAGATAAGCAGCATCTAGTTCAGAGTTGTGGAACAGCCGCCTGTAAGCTATATACGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR GCA 72 bp | AGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTaGACTCACCATCAGGATTCTAACACAGCCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: SMMSVLLCPYRF*THHQDSNTATS Trigger: AGATGTGGCTGTGTTAGAATCCTGATGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR TCA 72 bp | ATCCTCTCTCTTCTGACAATGCATCACATCAGAGTATaGTGTCAGTGCTTCTCTGCCCTTACAGATTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILSLLTMHHIRV*CQCFSALTDSA Trigger: TGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGTGATGCATTGTCAGAAGAGAGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR GCA 72 bp | TTTAGGTCAGAATACAAACCTGTGAGAGTCAGTTCTTaGCTTTCACCATGTAGGTCTTGGGGATTGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: FRSEYKPVRVSS*LSPCRSWGLNS Trigger: TGAGTTCAATCCCCAAGACCTACATGGTGAAAGGCAAGAACTGACTCTCACAGGTTTGTATTCTGACCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CCA 72 bp | ATGGCCATGGGTTTCACCATTTGCGTACCAGGAAACTaGAATGATTCCCCTATAGTAACAAAAATGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MAMGFTICVPGN*NDSPIVTKMLP Trigger: TGGAAGCATTTTTGTTACTATAGGGGAATCATTCCAGTTTCCTGGTACGCAAATGGTGAAACCCATGGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR TCA 72 bp | TGCTTTGCATTGAAGTTTTCTAGAAGTTTCCAGCCATaGGTGCCTTGTGATTGTTTTGTTGCCTTGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CFALKFSRSFQP*VPCDCFVALEE Trigger: CTCTTCCAAGGCAACAAAACAATCACAAGGCACTCATGGCTGGAAACTTCTAGAAAACTTCAATGCAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR GCA 72 bp | CCCTATAGTAACAAAAATGCTTCCATGAAGGAATTCTaGACCATACAGTCCCATGAAATGGAAGAAGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PYSNKNASMKEF*TIQSHEMEEGW Trigger: CCAACCTTCTTCCATTTCATGGGACTGTATGGTGCAGAATTCCTTCATGGAAGCATTTTTGTTACTATAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CCA 72 bp | TGTAGAAGGGACAGTAAACACAATTCTATATGTTTCTaGGGGGAGACAGCCAAGCTCTATGCTACACAATTT | + |
|
Preference number: 3 (lower is better) Translates to: CRRDSKHNSICF*GETAKLYATQF Trigger: AAATTGTGTAGCATAGAGCTTGGCTGTCTCCCCCCAGAAACATATAGAATTGTGTTTACTGTCCCTTCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGCAGTCTGAACAAAGTTaGGGAAATACATCTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SCLQVTGRLYALWCNCSRQSEQS*GNTSEN Trigger: ATTCTCAGATGTATTTCCCAAACTTTGTTCAGACTG...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CCA 72 bp | TCCAGCCATGAGTGCCTTGTGATTGTTTTGTTGCCTTaGAAGAGCTATGTGAAGAAATTCTTGAGTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: SSHECLVIVLLP*KSYVKKFLSVF Trigger: AAATACACTCAAGAATTTCTTCACATAGCTCTTCCAAGGCAACAAAACAATCACAAGGCACTCATGGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR TCA 72 bp | TATCCTCAACAAACCTCTTCTTCCCTAAGTTGTTTTTaGTTGTGGTATTTATCACAGCAACAGAGAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YPQQTSSSLSCF*LWYLSQQQRTA Trigger: TGCTGTTCTCTGTTGCTGTGATAAATACCACAATCAAAAACAACTTAGGGAAGAAGAGGTTTGTTGAGGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CCA 72 bp | CTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTaGATCCTGCAGATCTTAAATCATTCTTTGCGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSVLKTNVLSSQ*ILQILNHSLRF Trigger: AAAACGCAAAGAATGATTTAAGATCTGCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | CCCCACAGCCTGAGGGAGTTCATGAGCTGGCTGCAGTaGCTCCTCTTGGTCCTACTCTTTCTGTCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PHSLREFMSWLQ*LLLVLLFLSQS Trigger: ACTCTGGGACAGAAAGAGTAGGACCAAGAGGAGCAACTGCAGCCAGCTCATGAACTCCCTCAGGCTGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CAACAACACGAAATGACAGAGAGAATGGGCTGGAAGCCGTCCTCTGACTCTCACTGTACCCTCTGGTGCTaGGTAAGGCTGGACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQHEMTERMGWKPSSDSHCTLWC*VRLDLC Trigger: GCAGAGGTCCAGCCTTACTCAGCACCAGAGGGTACA...GTGAGAGTCAGAGGACGGCTTCCAGCCCATTCTCTCTGTCATTTCGTGTTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | TCGAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAAGGAGTGAGTTGCGGTTaGAGGCTTTGCCGCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQGVSCG*RLCRSL Trigger: AAGACTGCGGCAAAGCCTTCAACCGCAACTCACTCC...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | TTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGACTTCTCCAGTGTGGCGCCGTGCTGAGTGAGGAGTaGGTTGCGGTTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSCVNPRETCQRLLQCGAVLSEE*VAVEGF Trigger: AAAGCCTTCAACCGCAACTCACTCCTCACTCAGCAC...GGCGCCACACTGGAGAAGTCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | GCCTCGAACCACACCAATGGCTCTTGGAATGAACGTTaGCAAGTAGAGCTGTTTGGGCAAAAGGACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASNHTNGSWNER*QVELFGQKDTL Trigger: CAGTGTGTCCTTTTGCCCAAACAGCTCTACTTGCAAACGTTCATTCCAAGAGCCATTGGTGTGGTTCGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | TTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGACTTCTCCAGTGTGGCGCCTGGATGCTCTGGTGTTaGGTGAGGAGTGATTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: FSCVNPRETCQRLLQCGAWMLWC*VRSDLW Trigger: CCATAAATCACTCCTCACGCAACACCAGAGCATCCA...GGCGCCACACTGGAGAAGTCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGGGAGTGAGTTGCGGTTaGAGGCTTTGCCGCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLQVTGRLYALWCNCSRGVSCG*RLCRSL Trigger: AAGACTGCGGCAAAGCCTTCAACCGCAACTCACTCC...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAAGGTTTTTCTCCAGCTTaGCTTCTCGTAAGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQGFSPA*LLVRLE Trigger: TTCAAGCCTTACGAGAAGTCAAGCTGGAGAAAAACC...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | CAACAACACGAAATGACAGAGAGAATGGGCTGGAAGCCGTCCTCTGACTCTCACTCTGTACTCGAATTTTaGTTCAGTGATACCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QQHEMTERMGWKPSSDSHSVLEF*FSDTGC Trigger: ACATCCGGTATCACTGAACCAAAATTCGAGTACAGA...GTGAGAGTCAGAGGACGGCTTCCAGCCCATTCTCTCTGTCATTTCGTGTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAATTAAAGCTTGACCTCTaGGTAAAAGCCTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQLKLDL*VKALPQ Trigger: CTGTGGCAAGGCTTTTACCCAGAGGTCAAGCTTTAA...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | GCTCCTCTTGGTCCTACTCTTTCTGTCCCAGAGTACTaGGTACACCTATTGGCAATCTTTCCACTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: APLGPTLSVPEY*VHLLAIFPLMS Trigger: AGACATCAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGGACCAAGAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAAACTTCTCGTAAGGCTTaGACTTTGACTGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQTSRKA*TLTESC Trigger: ACAGCTTTCAGTCAAAGTTCAAGCCTTACGAGAAGT...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | ACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCAGGTTTTTCTCCAGCTTaGCTTCTCGTAAGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSEYDVSASLPLQILHSPGFSPA*LLVRLE Trigger: TTCAAGCCTTACGAGAAGTCAAGCTGGAGAAAAACC...TGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGTATGTTCTGCTCTGGTaGAAAGTCTTGGCTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLYVLLW*KVLAMM Trigger: CATCATAGCCAAGACTTTTCACCAGAGCAGAACATA...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | TTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGACTTCTCCAGTGTGGCGCCACAAAAATGTTTGAATaGAAGCTCAGCCCAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSCVNPRETCQRLLQCGATKMFE*KLSPKL Trigger: TAGCTTTGGGCTGAGCTTTCATTCAAACATTTTTGT...GGCGCCACACTGGAGAAGTCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | ACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCAACTTCTCGTAAGGCTTaGACTTTGACTGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSEYDVSASLPLQILHSPTSRKA*TLTESC Trigger: ACAGCTTTCAGTCAAAGTTCAAGCCTTACGAGAAGT...TGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCGTGCTGAGTGAGGAGTaGGTTGCGGTTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HANYQFSKQMFLVLSGSCVLSEE*VAVEGF Trigger: AAAGCCTTCAACCGCAACTCACTCCTCACTCAGCAC...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTTGGGAAATACATCTTGTACCCTCTGGTGCTaGGTAAGGCTGGACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSVYVLCIQSEQSLGNTSCTLWC*VRLDLC Trigger: GCAGAGGTCCAGCCTTACTCAGCACCAGAGGGTACA...AGATGTATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | CAACAACACGAAATGACAGAGAGAATGGGCTGGAAGCCGTCCTCTGACTCTCACTTTGATGAAATGCTTTaGCGCAATCTTTACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQHEMTERMGWKPSSDSHFDEML*RNLYNG Trigger: ACCATTGTAAAGATTGCGGCAAAGCATTTCATCAAA...GTGAGAGTCAGAGGACGGCTTCCAGCCCATTCTCTCTGTCATTTCGTGTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGGGACCTCTGCTTAAATaGTTTGCCACAGTCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLGPLLK*FATVFT Trigger: TGTAAAGACTGTGGCAAAGCATTTAAGCAGAGGTCC...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCCCAGTATGGCCTCTCTaGTGTAGGCTGAGGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HANYQFSKQMFLVLSGSCPVWPL*CRLRLD Trigger: ATCAAGCCTCAGCCTACACCAGAGAGGCCATACTGG...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGGTCTGCTTCAAAAACTaGCTCTGCTGTTTAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLVCFKN*LCCLMT Trigger: AGTCATTAAACAGCAGAGTCAGTTTTTGAAGCAGAC...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGAGAAGTAAGTTCCGGCTaGAGGCTTTGTCACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLYATQFSCVNPRETCQREVSSG*RLCHSL Trigger: AAGACTGTGACAAAGCCTTCAGCCGGAACTTACTTC...TCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | ATATGGTCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTGAAGTAAGTTCCGGCTaGAGGCTTTGTCACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWSCLQVTGRLYALWCNCEVSSG*RLCHSL Trigger: AAGACTGTGACAAAGCCTTCAGCCGGAACTTACTTC...ACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGACCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | GTCTTCAGACACACCAGAAGAGGGTGTCAGATCTCATTTCGAATGGTTGTGAGCGAATACTTTATGTTCTaGTCTGGTGAAAAGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRHTRRGCQISFRMVVSEYFMF*SGEKSW Trigger: CCAAGACTTTTCACCAGAGCAGAACATAAAGTATTC...GCTCACAACCATTCGAAATGAGATCTGACACCCTCTTCTGGTGTGTCTGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | ATATGGTCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTTGGATGCTCTGGTGTTaGGTGAGGAGTGATTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: IWSCLQVTGRLYALWCNCWMLWC*VRSDLW Trigger: CCATAAATCACTCCTCACGCAACACCAGAGCATCCA...ACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGACCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGATATGATGAGAAAACATaGCTGGGAACACGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLYATQFSCVNPRETCQRYDEKT*LGTRPW Trigger: CCATGGCCGTGTTCCCAGCCATGTTTTCTCATCATA...TCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | ACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCATCTGTACTCGAATTTTaGTTCAGTGATACCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSEYDVSASLPLQILHSPSVLEF*FSDTGC Trigger: ACATCCGGTATCACTGAACCAAAATTCGAGTACAGA...TGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATaGGCAATCTTTCCACTGATGTCTTATACACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: PTLSVPEYLVHL*AIFPLMSYTLT Trigger: AGTGAGTGTATAAGACATCAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | ACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCAACAAAAATGTTTGAATaGAAGCTCAGCCCAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSEYDVSASLPLQILHSPTKMFE*KLSPKL Trigger: TAGCTTTGGGCTGAGCTTTCATTCAAACATTTTTGT...TGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | ATATGGTCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTGTAAGGCTTGACCTTTaGTTAAACGCTCTGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: IWSCLQVTGRLYALWCNCVRLDL*LNALPQ Trigger: TTGTGGCAGAGCGTTTAATCAAAGGTCAAGCCTTAC...ACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGACCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGAGTAAGGCTTGACCTTTaGTTAAACGCTCTGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KLYATQFSCVNPRETCQRVRLDL*LNALPQ Trigger: TTGTGGCAGAGCGTTTAATCAAAGGTCAAGCCTTAC...TCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGCGATCTTTGATGAAATaGTTTGCCGCAATCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLRSLMK*FAAIFT Trigger: TGTAAAGATTGCGGCAAAGCATTTCATCAAAGATCG...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | ACCTTCCCAAATTCAAATGTGTCAATCACTGTGTTCCTCCTTGGTGTTGATCAACTCCTCACAAGTAACTaGTGTCACCTGAGGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSNVSITVFLLGVDQLLTSN*CHLRVF Trigger: AAAAACCCTCAGGTGACACCAGTTACTTGTGAGGAG...TTGATCAACACCAAGGAGGAACACAGTGATTGACACATTTGAATTTGGGAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGCTGTGTTTTGGCACATaGAAGACCTATTTGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLLCFGT*KTYLLI Trigger: AATCAACAAATAGGTCTTCCATGTGCCAAAACACAG...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | TTGGGAAATACATCTGAGAATACAACTATTAACACAGAACCGGTTGACAAAATGCCAGTATGGCCTCTCTaGTGTAGGCTGAGGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGNTSENTTINTEPVDKMPVWPL*CRLRLD Trigger: ATCAAGCCTCAGCCTACACCAGAGAGGCCATACTGG...CATTTTGTCAACCGGTTCTGTGTTAATAGTTGTATTCTCAGATGTATTTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | ACCTTCCCAAATTCAAATGTGTCAATCACTGTGTTCCTCCTTGGTGTTGATCAATTAAAGCTTGACCTCTaGGTAAAAGCCTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSNVSITVFLLGVDQLKLDL*VKALPQ Trigger: CTGTGGCAAGGCTTTTACCCAGAGGTCAAGCTTTAA...TTGATCAACACCAAGGAGGAACACAGTGATTGACACATTTGAATTTGGGAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | GAAGTTTCCAGCCATGAGTGCCTTGTGATTGTTTTGTaGCCTTGGAAGAGCTATGTGAAGAAATTCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVSSHECLVIVL*PWKSYVKKFLS Trigger: ACTCAAGAATTTCTTCACATAGCTCTTCCAAGGCAACAAAACAATCACAAGGCACTCATGGCTGGAAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | CTAGAAGTTTCCAGCCATGAGTGCCTTGTGATTGTTTaGTTGCCTTGGAAGAGCTATGTGAAGAAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVSSHECLVIV*LPWKSYVKKFL Trigger: CAAGAATTTCTTCACATAGCTCTTCCAAGGCAACAAAACAATCACAAGGCACTCATGGCTGGAAACTTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTTGGGAAATGGACCTCTGCTTAAATaGTTTGCCACAGTCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PAPSVYVLCIQSEQSLGNGPLLK*FATVFT Trigger: TGTAAAGACTGTGGCAAAGCATTTAAGCAGAGGTCC...ATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGGGGCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGGGGAATTCTGTGTTTTaGCACATGGAAGACCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLQVTGRLYALWCNCSRGNSVF*HMEDLF Trigger: AAATAGGTCTTCCATGTGCCAAAACACAGAATTCCC...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCTATGTTCTGCTCTGGTaGAAAGTCTTGGCTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HANYQFSKQMFLVLSGSCYVLLW*KVLAMM Trigger: CATCATAGCCAAGACTTTTCACCAGAGCAGAACATA...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | ACCTTCCCAAATTCAAATGTGTCAATCACTGTGTTCCTCCTTGGTGTTGATCAAGTAACAGTCGATCTTTaGTTGAAAGCTTTGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSNVSITVFLLGVDQVTVDL*LKALPQ Trigger: TTGTGGCAAAGCTTTCAATCAAAGATCGACTGTTAC...TTGATCAACACCAAGGAGGAACACAGTGATTGACACATTTGAATTTGGGAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTTGGGAAATGTAACAGTCGATCTTTaGTTGAAAGCTTTGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PAPSVYVLCIQSEQSLGNVTVDL*LKALPQ Trigger: TTGTGGCAAAGCTTTCAATCAAAGATCGACTGTTAC...ATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGGGGCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGATCTGTATACAAATTCTaGTGCTCAGAATCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: KLYATQFSCVNPRETCQRSVYKF*CSESRH Trigger: GTGTCTGGATTCTGAGCAGCAGAATTTGTATACAGA...TCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGGAATACTTTATGTTCTaGTCTGGTGAAAAGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLQVTGRLYALWCNCSREYFMF*SGEKSW Trigger: CCAAGACTTTTCACCAGAGCAGAACATAAAGTATTC...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTTGGGAAATACATCTTATGATGAGAAAACATaGCTGGGAACACGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PSVYVLCIQSEQSLGNTSYDEKT*LGTRPW Trigger: CCATGGCCGTGTTCCCAGCCATGTTTTCTCATCATA...AGATGTATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | ATATGGTCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTGGGAATTCTGTGTTTTaGCACATGGAAGACCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: IWSCLQVTGRLYALWCNCGNSVF*HMEDLF Trigger: AAATAGGTCTTCCATGTGCCAAAACACAGAATTCCC...ACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGACCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | TTGGAAGAGCTATGTGAAGAAATTCTTGAGTGTATTTaGCCTTTAGATGGCCATGGGTTTCACCATTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LEELCEEILECI*PLDGHGFHHLR Trigger: ACGCAAATGGTGAAACCCATGGCCATCTAAAGGCAAAATACACTCAAGAATTTCTTCACATAGCTCTTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCTTTCCAAATTATCTTTaGAAGAAGGGGTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HANYQFSKQMFLVLSGSCFPNYL*KKGSAS Trigger: TGAAGCAGACCCCTTCTTTCAAAGATAATTTGGAAA...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGATTTGATGAAATGCTTTaGCGCAATCTTTACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLYATQFSCVNPRETCQRFDEML*RNLYNG Trigger: ACCATTGTAAAGATTGCGGCAAAGCATTTCATCAAA...TCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR GCA 90 bp | CATGCAAACTATCAGTTCTCAAAACAAATGTTCTTAGTTCTCAGTGGATCCTGCCGATCTTTGATGAAATaGTTTGCCGCAATCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: HANYQFSKQMFLVLSGSCRSLMK*FAAIFT Trigger: TGTAAAGATTGCGGCAAAGCATTTCATCAAAGATCG...GCAGGATCCACTGAGAACTAAGAACATTTGTTTTGAGAACTGATAGTTTGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR TCA 90 bp | TTGGGAAATACATCTGAGAATACAACTATTAACACAGAACCGGTTGACAAAATGGTCTGCTTCAAAAACTaGCTCTGCTGTTTAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LGNTSENTTINTEPVDKMVCFKN*LCCLMT Trigger: AGTCATTAAACAGCAGAGTCAGTTTTTGAAGCAGAC...CATTTTGTCAACCGGTTCTGTGTTAATAGTTGTATTCTCAGATGTATTTCCCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | TTGGGAAATACATCTGAGAATACAACTATTAACACAGAACCGGTTGACAAAATGCCACAGATGAGTTCCTaGAATGAATACTTTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGNTSENTTINTEPVDKMPQMSS*NEYFMF Trigger: GAACATAAAGTATTCATTCCAGGAACTCATCTGTGG...CATTTTGTCAACCGGTTCTGTGTTAATAGTTGTATTCTCAGATGTATTTCCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTTGGGAAATACATCTCCACAGATGAGTTCCTaGAATGAATACTTTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSVYVLCIQSEQSLGNTSPQMSS*NEYFMF Trigger: GAACATAAAGTATTCATTCCAGGAACTCATCTGTGG...AGATGTATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| 3UTR CAA 72 bp | ACTAAACATGTCGACAACAGCTTTATGCTACTGACCTaGCATTTGAAGGAAGAAAAATCAAGTGGTATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKHVDNSFMLLT*HLKEEKSSGIV Trigger: TACAATACCACTTGATTTTTCTTCCTTCAAATGCAAGGTCAGTAGCATAAAGCTGTTGTCGACATGTTTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS CCA 90 bp | GCAGGTTCTCAGGATGTCACCCTCCTCAACACAGTCCCTTTCTCCTaGGAAGTACAAAGCGTCAAAGCCACACTGTCCACGAGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGSQDVTLLNTVPFS*EVQSVKATLSTRST Trigger: TGTGGACCTCGTGGACAGTGTGGCTTTGACGCTTTGTACTTCCCAGGAGAAAGGGACTGTGTTGAGGAGGGTGACATCCTGAGAACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS CCA 90 bp | ATCTCTCCTGGGAGTAAAGCTTTTGCTGTTGCCAGCTGTCAGAAATaGGTTGTGCCCGTTATAGCAGGTTCTCAGGATGTCACCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISPGSKAFAVASCQK*VVPVIAGSQDVTLL Trigger: GAGGAGGGTGACATCCTGAGAACCTGCTATAACGGGCACAACCCATTTCTGACAGCTGGCAACAGCAAAAGCTTTACTCCCAGGAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS TCA 90 bp | GAAAGAAGGGGTCTGCTTCAAAAACTGACTCTGCTGTTTAATGACTaGAGCGCACGGCTCCTCACAAGTAACTGGTGTCACCTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ERRGLLQKLTLLFND*SARLLTSNWCHLRV Trigger: AACCCTCAGGTGACACCAGTTACTTGTGAGGAGCCGTGCGCTTCAGTCATTAAACAGCAGAGTCAGTTTTTGAAGCAGACCCCTTCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | GTCTTCAGACACACCAGAAGAGGGTGTCAGATCTCATTTCGAATGGTTGTGAGCAGCCCAAAGCTACACTaGAAATTGTTGAAGTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VFRHTRRGCQISFRMVVSSPKLH*KLLKSV Trigger: TACCGACTTCAACAATTTCAAGTGTAGCTTTGGGCT...GCTCACAACCATTCGAAATGAGATCTGACACCCTCTTCTGGTGTGTCTGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | CAACAACACGAAATGACAGAGAGAATGGGCTGGAAGCCGTCCTCTGACTCTCACCTTGGAAATCTGATCTaGAATATGGATGTACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QQHEMTERMGWKPSSDSHLGNLI*NMDVLM Trigger: CATCAGTACATCCATATTCAAGATCAGATTTCCAAG...GTGAGAGTCAGAGGACGGCTTCCAGCCCATTCTCTCTGTCATTTCGTGTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | TGGGCAAAAGGACACACTGTGATTCACACTGACACACCACAGCTTCCACATCAACCACAGTCTTTACATTaGTGCTGTTTGACTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAKGHTVIHTDTPQLPHQPQSLH*CCLTPE Trigger: TTCTGGAGTCAAACAGCACAAATGTAAAGACTGTGG...TTGATGTGGAAGCTGTGGTGTGTCAGTGTGAATCACAGTGTGTCCTTTTGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGCTCTGCTTAAATGCTTaGCCACAGTCTTTACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLLCLNA*PQSLQW Trigger: CCACTGTAAAGACTGTGGCAAAGCATTTAAGCAGAG...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | ACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCACTCTGCTTAAATGCTTaGCCACAGTCTTTACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSEYDVSASLPLQILHSPLCLNA*PQSLQW Trigger: CCACTGTAAAGACTGTGGCAAAGCATTTAAGCAGAG...TGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | ACATCAGAGTATGATGTCAGTGCTTCTCTGCCCTTACAGATTCTGCACTCACCAAGCCCAAAGCTACACTaGAAATTGTTGAAGTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TSEYDVSASLPLQILHSPSPKLH*KLLKSV Trigger: TACCGACTTCAACAATTTCAAGTGTAGCTTTGGGCT...TGGTGAGTGCAGAATCTGTAAGGGCAGAGAAGCACTGACATCATACTCTGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | TTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGACTTCTCCAGTGTGGCGCCCTTGGAAATCTGATCTaGAATATGGATGTACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSCVNPRETCQRLLQCGALGNLI*NMDVLM Trigger: CATCAGTACATCCATATTCAAGATCAGATTTCCAAG...GGCGCCACACTGGAGAAGTCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | CCTACTCTTTCTGTCCCAGAGTACTTGGTACACCTATTGGCAATCTTTCCACTGTTTTCCAAATTATCTTaGAAAGAAGGGGTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTLSVPEYLVHLLAIFPLFSKLS*KEGVCF Trigger: GAAGCAGACCCCTTCTTTCAAAGATAATTTGGAAAA...CAGTGGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGTGGGAATTCTGTGTTTaGGCACATGGAAGACCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SCLQVTGRLYALWCNCSRWEFCV*AHGRPI Trigger: AATAGGTCTTCCATGTGCCAAAACACAGAATTCCCA...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGCCACAGTCTTTACATTaGTGCTGTTTGACTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCLQVTGRLYALWCNCSRPQSLH*CCLTPE Trigger: TTCTGGAGTCAAACAGCACAAATGTAAAGACTGTGG...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTTGGGAAATAGTAACAGTCGATCTTaGATTGAAAGCTTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PAPSVYVLCIQSEQSLGNSNSRS*IESFAT Trigger: TGTGGCAAAGCTTTCAATCAAAGATCGACTGTTACT...ATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGGGGCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | TCATGTCTTCAAGTCACAGGGAGATTATATGCACTGTGGTGCAATTGTAGTAGGTATATTGGAGAAATTTaGTGTCTTCAAAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLQVTGRLYALWCNCSRYIGEI*CLQSSC Trigger: GCAGCTGCTTTGAAGACACAAAATTTCTCCAATATA...CCTACTACAATTGCACCACAGTGCATATAATCTCCCTGTGACTTGAAGACATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | AAGCTCTATGCTACACAATTTAGTTGTGTAAATCCTAGGGAGACCTGCCAAAGATTTTCCAAATTATCTTaGAAAGAAGGGGTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLYATQFSCVNPRETCQRFSKLS*KEGVCF Trigger: GAAGCAGACCCCTTCTTTCAAAGATAATTTGGAAAA...TCTTTGGCAGGTCTCCCTAGGATTTACACAACTAAATTGTGTAGCATAGAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | ACCTTCCCAAATTCAAATGTGTCAATCACTGTGTTCCTCCTTGGTGTTGATCAACATCTACAAAAATGTTaGAATGAAAGCTCAGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TFPNSNVSITVFLLGVDQHLQKC*NESSAQ Trigger: TTGGGCTGAGCTTTCATTCAAACATTTTTGTAGATG...TTGATCAACACCAAGGAGGAACACAGTGATTGACACATTTGAATTTGGGAAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCCAGTGTGTATGTTTTATGTATACAGTCTGAACAAAGTTTGGGAAATTATATTGGAGAAATTTaGTGTCTTCAAAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPSVYVLCIQSEQSLGNYIGEI*CLQSSC Trigger: GCAGCTGCTTTGAAGACACAAAATTTCTCCAATATA...ATTTCCCAAACTTTGTTCAGACTGTATACATAAAACATACACACTGGGGGCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
||
| CDS-3UTR CAA 90 bp | TTGGGAAATACATCTGAGAATACAACTATTAACACAGAACCGGTTGACAAAATGTGGGAATTCTGTGTTTaGGCACATGGAAGACCTATT | + |
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Preference number: 5 (lower is better) Translates to: LGNTSENTTINTEPVDKMWEFCV*AHGRPI Trigger: AATAGGTCTTCCATGTGCCAAAACACAGAATTCCCA...CATTTTGTCAACCGGTTCTGTGTTAATAGTTGTATTCTCAGATGTATTTCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS-3UTR CAA 90 bp | TTGGGAAATACATCTGAGAATACAACTATTAACACAGAACCGGTTGACAAAATGAGTAACAGTCGATCTTaGATTGAAAGCTTTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: LGNTSENTTINTEPVDKMSNSRS*IESFAT Trigger: TGTGGCAAAGCTTTCAATCAAAGATCGACTGTTACT...CATTTTGTCAACCGGTTCTGTGTTAATAGTTGTATTCTCAGATGTATTTCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS CCA 72 bp | CAGGATGTCACCCTCCTCAACACAGTCCCTTTCTCCTaGGAAGTACAAAGCGTCAAAGCCACACTGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: QDVTLLNTVPFS*EVQSVKATLST Trigger: CGTGGACAGTGTGGCTTTGACGCTTTGTACTTCCCAGGAGAAAGGGACTGTGTTGAGGAGGGTGACATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS GCA 72 bp | TGGTGTCACCTGAGGGTTTTTGTGAGCCATCTCTTGTaGCCGATCTCTCCTGGGAGTAAAGCTTTTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: WCHLRVFVSHLL*PISPGSKAFAV Trigger: AACAGCAAAAGCTTTACTCCCAGGAGAGATCGGGCACAAGAGATGGCTCACAAAAACCCTCAGGTGACACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS CCA 72 bp | GGCTATGATGAGAAAACATGGCTGGGAACACGGCCATaGTCTTTTGCGTCTTTACATTCCAGGGCTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GYDEKTWLGTRP*SFASLHSRALS Trigger: GGAAAGAGCCCTGGAATGTAAAGACGCAAAAGACCATGGCCGTGTTCCCAGCCATGTTTTCTCATCATAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS CCA 72 bp | GGGAGTAAAGCTTTTGCTGTTGCCAGCTGTCAGAAATaGGTTGTGCCCGTTATAGCAGGTTCTCAGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: GSKAFAVASCQK*VVPVIAGSQDV Trigger: GACATCCTGAGAACCTGCTATAACGGGCACAACCCATTTCTGACAGCTGGCAACAGCAAAAGCTTTACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS CCA 72 bp | TTTGTGTCTTCAAAGCAGCTGCCTAATGAGGTGCACTaGTGTTCGGCAAGGTGGGAACTGGATTTAAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: FVSSKQLPNEVH*CSARWELDLKA Trigger: CGCCTTTAAATCCAGTTCCCACCTTGCCGAACACCAGTGCACCTCATTAGGCAGCTGCTTTGAAGACACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS CAA 72 bp | AACTGGTGTCACCTGAGGGTTTTTGTGAGCCATCTCTaGTGCCCGATCTCTCCTGGGAGTAAAGCTTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: NWCHLRVFVSHL*CPISPGSKAFA Trigger: AGCAAAAGCTTTACTCCCAGGAGAGATCGGGCACAAGAGATGGCTCACAAAAACCCTCAGGTGACACCAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS TCA 72 bp | GGTCTGCTTCAAAAACTGACTCTGCTGTTTAATGACTaGAGCGCACGGCTCCTCACAAGTAACTGGTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: GLLQKLTLLFND*SARLLTSNWCH Trigger: GTGACACCAGTTACTTGTGAGGAGCCGTGCGCTTCAGTCATTAAACAGCAGAGTCAGTTTTTGAAGCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS GCA 72 bp | ATATATATTGGAGAAATTTTGTGTCTTCAAAGCAGCTaGCTAATGAGGTGCACTGGTGTTCGGCAAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: IYIGEILCLQSS*LMRCTGVRQGG Trigger: CCCACCTTGCCGAACACCAGTGCACCTCATTAGGCAGCTGCTTTGAAGACACAAAATTTCTCCAATATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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| CDS TCA 72 bp | AAATTATCTTTGAAAGAAGGGGTCTGCTTCAAAAACTaGCTCTGCTGTTTAATGACTGAAGCGCACGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KLSLKEGVCFKN*LCCLMTEAHGS Trigger: GGAGCCGTGCGCTTCAGTCATTAAACAGCAGAGTCAGTTTTTGAAGCAGACCCCTTCTTTCAAAGATAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165956.3 ENSMUST00000197653.5 |
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