Pregenerated sensors for ZFP266 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060510Ensembl transcript IDs: ENSMUST00000068296.8, ENSMUST00000174462.8, ENSMUST00000215908.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGGGATCAAACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTaGGCCATTTTGCCAGCTCTAGTGTTTTGTGGTACTGTGGCAATG | + |
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Preference number: 1 (lower is better) Translates to: PWDQTQFLLTSTFTF*AILPALVFCGTVAM Trigger: CATTGCCACAGTACCACAAAACACTAGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTTTGATCCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 90 bp | GTAGAATCGATCCACTGGGCTCAAGATTATAGCTCAGTGGCAGAGTaGTTGCCTCAGCTGGGCTTGTTTGATCCTCAGCAATCACACAAA | + |
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Preference number: 1 (lower is better) Translates to: VESIHWAQDYSSVAE*LPQLGLFDPQQSHK Trigger: TTTGTGTGATTGCTGAGGATCAAACAAGCCCAGCTGAGGCAAGCACTCTGCCACTGAGCTATAATCTTGAGCCCAGTGGATCGATTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 90 bp | CATCTGGCTGTTTTGGTGGCGCTGAGGACTGAAACCACAGCCTTGTaGATTGCTAAACAGGCACTCTTCTTATCCCTACTCCATTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: HLAVLVALRTETTAL*IAKQALFLSLLHFF Trigger: GAAGAAATGGAGTAGGGATAAGAAGAGTGCCTGTTTAGCAATGCACAAGGCTGTGGTTTCAGTCCTCAGCGCCACCAAAACAGCCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 90 bp | ACTACTTCTTGGTATGCTCATCAGAACCAATGGGGTCCGAGTAGTTaGCTAGGAGTGTCTTTCCACAATCCACCTGTGTCCTATATTATC | + |
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Preference number: 1 (lower is better) Translates to: TTSWYAHQNQWGPSS*LGVSFHNPPVSYII Trigger: GATAATATAGGACACAGGTGGATTGTGGAAAGACACTCCTAGGCAACTACTCGGACCCCATTGGTTCTGATGAGCATACCAAGAAGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 90 bp | CCTGCCTTGGCTTCCCAACCCCTAAGATTACAGTGTGAGGCAACATaGTGTAGTTTGAGACAAATACTCTCCAAAAGAATACTGACTGAG | + |
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Preference number: 1 (lower is better) Translates to: PALASQPLRLQCEAT*CSLRQILSKRILTE Trigger: CTCAGTCAGTATTCTTTTGGAGAGTATTTGTCTCAAACTACAGCATGTTGCCTCACACTGTAATCTTAGGGGTTGGGAAGCCAAGGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CCA 90 bp | TATGTGAGCAAGCATAAACAACATGAAGTAGTAGAATCGATCCACTaGGCTCAAGATTATAGCTCAGTGGCAGAGTGCTTGCCTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: YVSKHKQHEVVESIH*AQDYSSVAECLPQL Trigger: CAGCTGAGGCAAGCACTCTGCCACTGAGCTATAATCTTGAGCCCAGTGGATCGATTCTACTACTTCATGTTGTTTATGCTTGCTCACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 90 bp | ACGAGGCCCCCAGTTCTATCCTCAGATCATCAATCTCAACCAACCTaGGGAATATGGACAAAGTTACTGTCACTGCAATCCAAAATGGAT | + |
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Preference number: 1 (lower is better) Translates to: TRPPVLSSDHQSQPT*GIWTKLLSLQSKMD Trigger: ATCCATTTTGGATTGCAGTGACAGTAACTTTGTCCATATTCCTCAGGTTGGTTGAGATTGATGATCTGAGGATAGAACTGGGGGCCTCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 90 bp | TGTTCAGATAGGGTCTTTAGAATTTCATTTGATAGTCCAGGACAATaGGTGGAAACGTCATTCCACAATGCTGCGATTTGTATGAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: CSDRVFRISFDSPGQ*VETSFHNAAICMSR Trigger: TCTACTCATACAAATCGCAGCATTGTGGAATGACGTTTCCACTCATTGTCCTGGACTATCAAATGAAATTCTAAAGACCCTATCTGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 90 bp | TCATTCCAGTATTTATTATTATGGAACAATGAAATCCTAGATACTTaGGTGCTACCAGCCAATGAGGATAGTCATCTCAGAGGATACAGG | + |
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Preference number: 1 (lower is better) Translates to: SFQYLLLWNNEILDT*VLPANEDSHLRGYR Trigger: CCTGTATCCTCTGAGATGACTATCCTCATTGGCTGGTAGCACTCAAGTATCTAGGATTTCATTGTTCCATAATAATAAATACTGGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTAGCCTTGAAACTGAGTaGCAGGTAGAGGCCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSSLETE*QVEASY Trigger: ATAGCTGGCCTCTACCTGTCACTCAGTTTCAAGGCT...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTTCCTGGCCTCACTTATaGCCCACAGATGCTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: NSVPAHKHLYLLSHFASSSWPHL*PTDALT Trigger: AGTCAGAGCATCTGTGGGTCATAAGTGAGGCCAGGA...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR TCA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAAAGTCAAGCATCAGAATaGAGCCACTTAGTGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKSQASE*SHLVSW Trigger: CCAGGACACTAAGTGGCTTCATTCTGATGCTTGACT...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTGCAGGGAAAGAGCTTTaGCCTCTGAACCATTTCACT | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSAGKEL*PLNHFT Trigger: AGTGAAATGGTTCAGAGGGCAAAGCTCTTTCCCTGC...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CAA 90 bp | GAATCGATCCACTGGGCTCAAGATTATAGCTCAGTGGCAGAGTGCTaGCCTCAGCTGGGCTTGTTTGATCCTCAGCAATCACACAAAACA | + |
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Preference number: 2 (lower is better) Translates to: ESIHWAQDYSSVAEC*PQLGLFDPQQSHKT Trigger: TGTTTTGTGTGATTGCTGAGGATCAAACAAGCCCAGCTGAGGCAAGCACTCTGCCACTGAGCTATAATCTTGAGCCCAGTGGATCGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTCACTTAGATGGGTTCTaGGAAAGCAAACTCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSHLDGF*ESKLWF Trigger: GAACCAGAGTTTGCTTTCTCAGAACCCATCTAAGTG...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTTCATATGAAAGCGACTaGATGCCAGGAAGAGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSSYESD*MPGRVY Trigger: GTAGACTCTTCCTGGCATGCAGTCGCTTTCATATGA...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTTTCCACATTTGCAGGTaGCATGTGGAAACCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSFHICR*HVETRK Trigger: CTTTCTGGTTTCCACATGCCACCTGCAAATGTGGAA...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CAA 90 bp | TTACATCTGGCTGTTTTGGTGGCGCTGAGGACTGAAACCACAGCCTaGTGCATTGCTAAACAGGCACTCTTCTTATCCCTACTCCATTTC | + |
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Preference number: 2 (lower is better) Translates to: LHLAVLVALRTETTA*CIAKQALFLSLLHF Trigger: GAAATGGAGTAGGGATAAGAAGAGTGCCTGTTTAGCAATGCACAAGGCTGTGGTTTCAGTCCTCAGCGCCACCAAAACAGCCAGATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CCA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAAAATGGATTCAAAAGATaGGGCAGAATGGACGATCTG | + |
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Preference number: 2 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKNGFKR*GRMDDL Trigger: CAGATCGTCCATTCTGCCCCATCTTTTGAATCCATT...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CCA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAAAGCTCTAGTGTTTTGTaGTACTGTGGCAATGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKSSSVL*YCGNAV Trigger: TACTGCATTGCCACAGTACCACAAAACACTAGAGCT...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTCAATCTCAACCAACCTaGGGAATATGGACAAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSQSQPT*GIWTKL Trigger: TAACTTTGTCCATATTCCTCAGGTTGGTTGAGATTG...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTCCACACTACAATAACTaGGAAATCTGTGCTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSPHYNN*EICAKR Trigger: TCTCTTAGCACAGATTTCTCAGTTATTGTAGTGTGG...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTCTTATGACCCACAGATaGTCTGACTCAGATATTCAT | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSLMTHR*SDSDIH Trigger: ATGAATATCTGAGTCAGAGCATCTGTGGGTCATAAG...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTTCCAGAAGCCAAGCATaGTGTTATTTTGTGTTCATG | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSSRSQA*CYFVFM Trigger: CATGAACACAAAATAACAGCATGCTTGGCTTCTGGA...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTGAAATTATTGCAGATTaGAATACAAGGCAGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSEIIAD*NTRQTQ Trigger: TTGGGTCTGCCTTGTATTTCAATCTGCAATAATTTC...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR GCA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTCAAAGTTACTGTCACTaGAATCCAAAATGGATTCAA | + |
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Preference number: 2 (lower is better) Translates to: NSVPAHKHLYLLSHFASSQSYCH*NPKWIQ Trigger: TTGAATCCATTTTGGATTGCAGTGACAGTAACTTTG...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTTGTCCTATATTATCTTaGCCTGTGATGAATTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: NSVPAHKHLYLLSHFASSCPILS*PVMNFH Trigger: GTGAAAATTCATCACAGGCCAAGATAATATAGGACA...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTAGAAAAAGCAATCAGTaGTGTGTAGTGATATTGAAC | + |
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Preference number: 2 (lower is better) Translates to: NSVPAHKHLYLLSHFASSRKSNQ*CVVILN Trigger: GTTCAATATCACTACACACCACTGATTGCTTTTTCT...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CAA 90 bp | CTAAAGCTCAGCATGACTGTTCAGATAGGGTCTTTAGAATTTCATTaGATAGTCCAGGACAATGAGTGGAAACGTCATTCCACAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LKLSMTVQIGSLEFH*IVQDNEWKRHSTML Trigger: CAGCATTGTGGAATGACGTTTCCACTCATTGTCCTGGACTATCAAATGAAATTCTAAAGACCCTATCTGAACAGTCATGCTGAGCTTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CCA 72 bp | GATAGCCTGAGGACTCCCCTCTTACTTCCCAAGCCTTaGGGTTACAGGCGGCCTGCCCCCACAGCCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: DSLRTPLLLPKP*GYRRPAPTATC Trigger: GCAGGTGGCTGTGGGGGCAGGCCGCCTGTAACCCCAAGGCTTGGGAAGTAAGAGGGGAGTCCTCAGGCTATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CCA 72 bp | ACAGGCGGCCTGCCCCCACAGCCACCTGCACTTAGATaGGTTCTGAGAAAGCAAACTCTGGTTCTCGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: TGGLPPQPPALR*VLRKQTLVLVF Trigger: AAACACGAGAACCAGAGTTTGCTTTCTCAGAACCCATCTAAGTGCAGGTGGCTGTGGGGGCAGGCCGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTCCACAGCCTTGTGCATaGCTAAACAGGCACTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSPQPCA*LNRHSS Trigger: AGAAGAGTGCCTGTTTAGCAATGCACAAGGCTGTGG...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | TGGTATGCTCATCAGAACCAATGGGGTCCGAGTAGTTaGCTAGGAGTGTCTTTCCACAATCCACCTGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: WYAHQNQWGPSS*LGVSFHNPPVS Trigger: GGACACAGGTGGATTGTGGAAAGACACTCCTAGGCAACTACTCGGACCCCATTGGTTCTGATGAGCATACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | ATCCACTGGGCTCAAGATTATAGCTCAGTGGCAGAGTaGTTGCCTCAGCTGGGCTTGTTTGATCCTCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: IHWAQDYSSVAE*LPQLGLFDPQQ Trigger: TTGCTGAGGATCAAACAAGCCCAGCTGAGGCAAGCACTCTGCCACTGAGCTATAATCTTGAGCCCAGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CCA 72 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTaGGTCCCTGGGATCAAACTCAGTTCCTGCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: LMCSSPCSPLTV*VPGIKLSSCSQ Trigger: TTGTGAGCAGGAACTGAGTTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTACTGAAACCACAGCCTaGTGCATTGCTAAACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSTETTA*CIAKQA Trigger: TGCCTGTTTAGCAATGCACAAGGCTGTGGTTTCAGT...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | TTGACTGTGTGGGTCCCTGGGATCAAACTCAGTTCCTaGTCACAAGCACCTTTACCTTCTGAGCCATTTTGC | + |
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Preference number: 3 (lower is better) Translates to: LTVWVPGIKLSS*SQAPLPSEPFC Trigger: GCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTTTGATCCCAGGGACCCACACAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | GTTTTGGTGGCGCTGAGGACTGAAACCACAGCCTTGTaGATTGCTAAACAGGCACTCTTCTTATCCCTACTC | + |
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Preference number: 3 (lower is better) Translates to: VLVALRTETTAL*IAKQALFLSLL Trigger: GAGTAGGGATAAGAAGAGTGCCTGTTTAGCAATGCACAAGGCTGTGGTTTCAGTCCTCAGCGCCACCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | CTCGTAGATTCAAGTAACCTAACTACTCAGATAGCCTaGGGACTCCCCTCTTACTTCCCAAGCCTTGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: LVDSSNLTTQIA*GLPSYFPSLGV Trigger: AACCCCAAGGCTTGGGAAGTAAGAGGGGAGTCCTCAGGCTATCTGAGTAGTTAGGTTACTTGAATCTACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | CAAACTCTGGTTCTCGTGTTTGCAGGGAAAGAGCTTTaGCCTCTGAACCATTTCACTAGCTCCCATGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: QTLVLVFAGKEL*PLNHFTSSHAV Trigger: AACAGCATGGGAGCTAGTGAAATGGTTCAGAGGGCAAAGCTCTTTCCCTGCAAACACGAGAACCAGAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CAA 90 bp | GACTGTGTGGGTCCCTGGGATCAAACTCAGTTCCTGCTCACAAGCACCTTTACCGTGTCCTATATTATCTaGGCCTGTGATGAATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: DCVGPWDQTQFLLTSTFTVSYII*ACDEFS Trigger: TGAAAATTCATCACAGGCCAAGATAATATAGGACAC...GGTAAAGGTGCTTGTGAGCAGGAACTGAGTTTGATCCCAGGGACCCACACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR-3UTR CAA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTGGTAGGAACTACTTCTaGGTATGCTCATCAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: NSVPAHKHLYLLSHFASSGRNYF*VCSSEP Trigger: TGGTTCTGATGAGCATACCAAGAAGTAGTTCCTACC...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | TGGTTCTCGTGTTTGCAGGGAAAGAGCTTTGCCCTCTaGACCATTTCACTAGCTCCCATGCTGTTATTCTTG | + |
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Preference number: 3 (lower is better) Translates to: WFSCLQGKSFAL*TISLAPMLLFL Trigger: CAAGAATAACAGCATGGGAGCTAGTGAAATGGTTCAGAGGGCAAAGCTCTTTCCCTGCAAACACGAGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | CTCATTTTCAGACTTTGTCATATGAAAGCGACTGCATaGCAGGAAGAGTCTACTCCAGAAGCCAAGCATGCT | + |
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Preference number: 3 (lower is better) Translates to: LIFRLCHMKATA*QEESTPEAKHA Trigger: AGCATGCTTGGCTTCTGGAGTAGACTCTTCCTGGCATGCAGTCGCTTTCATATGACAAAGTCTGAAAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CCA 72 bp | AAGATTATAGCTCAGTGGCAGAGTGCTTGCCTCAGCTaGGCTTGTTTGATCCTCAGCAATCACACAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: KIIAQWQSACLS*ACLILSNHTKQ Trigger: TTGTTTTGTGTGATTGCTGAGGATCAAACAAGCCCAGCTGAGGCAAGCACTCTGCCACTGAGCTATAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | AATCCTCATTTTCAGACTTTGTCATATGAAAGCGACTaGATGCCAGGAAGAGTCTACTCCAGAAGCCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: NPHFQTLSYESD*MPGRVYSRSQA Trigger: TGCTTGGCTTCTGGAGTAGACTCTTCCTGGCATGCAGTCGCTTTCATATGACAAAGTCTGAAAATGAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | CCAGTTCTATCCTCAGATCATCAATCTCAACCAACCTaGGGAATATGGACAAAGTTACTGTCACTGCAATCC | + |
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Preference number: 3 (lower is better) Translates to: PVLSSDHQSQPT*GIWTKLLSLQS Trigger: GGATTGCAGTGACAGTAACTTTGTCCATATTCCTCAGGTTGGTTGAGATTGATGATCTGAGGATAGAACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CCA 72 bp | AAGCATAAACAACATGAAGTAGTAGAATCGATCCACTaGGCTCAAGATTATAGCTCAGTGGCAGAGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: KHKQHEVVESIH*AQDYSSVAECL Trigger: CAAGCACTCTGCCACTGAGCTATAATCTTGAGCCCAGTGGATCGATTCTACTACTTCATGTTGTTTATGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR GCA 72 bp | GCTTCCCAACCCCTAAGATTACAGTGTGAGGCAACATaGTGTAGTTTGAGACAAATACTCTCCAAAAGAATA | + |
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Preference number: 3 (lower is better) Translates to: ASQPLRLQCEAT*CSLRQILSKRI Trigger: TATTCTTTTGGAGAGTATTTGTCTCAAACTACAGCATGTTGCCTCACACTGTAATCTTAGGGGTTGGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | TATTTCATAAAATTCGGATGGTGTCTAAGGCCAGTGTaGGCCTCTATAACCCACACAAAGCAGTTAAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: YFIKFGWCLRPV*ASITHTKQLRL Trigger: TAGTCTTAACTGCTTTGTGTGGGTTATAGAGGCTCACACTGGCCTTAGACACCATCCGAATTTTATGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | GCAACTTGGTTCCTCCTGAGTGCCTTTAGTAAAATATaGAAAGGGGAGAACACTGAAGCTAAGAAGAAATTG | + |
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Preference number: 3 (lower is better) Translates to: ATWFLLSAFSKI*KGENTEAKKKL Trigger: CAATTTCTTCTTAGCTTCAGTGTTCTCCCCTTTTCATATTTTACTAAAGGCACTCAGGAGGAACCAAGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | AGGGTCTTTAGAATTTCATTTGATAGTCCAGGACAATaGGTGGAAACGTCATTCCACAATGCTGCGATTTGT | + |
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Preference number: 3 (lower is better) Translates to: RVFRISFDSPGQ*VETSFHNAAIC Trigger: ACAAATCGCAGCATTGTGGAATGACGTTTCCACTCATTGTCCTGGACTATCAAATGAAATTCTAAAGACCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CCA 72 bp | TGTCTTTCCACAATCCACCTGTGTCCTATATTATCTTaGCCTGTGATGAATTTTCACATTAACAAGCCACAC | + |
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Preference number: 3 (lower is better) Translates to: CLSTIHLCPILS*PVMNFHINKPH Trigger: GTGTGGCTTGTTAATGTGAAAATTCATCACAGGCCAAGATAATATAGGACACAGGTGGATTGTGGAAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | ATTTCACTAGCTCCCATGCTGTTATTCTTGCATGTGTaGGAAAATAAATTGCTATATATGGTCTGTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: ISLAPMLLFLHV*ENKLLYMVCPL Trigger: CAGTGGACAGACCATATATAGCAATTTATTTTCTCACACATGCAAGAATAACAGCATGGGAGCTAGTGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | CCTAAAACAGTGTCAATTATTCTAAATCAGGATACCTaGACAGGTTTAGAATTAGGACAGGAGAGGAATACA | + |
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Preference number: 3 (lower is better) Translates to: PKTVSIILNQDT*TGLELGQERNT Trigger: TGTATTCCTCTCCTGTCCTAATTCTAAACCTGTTCAGGTATCCTGATTTAGAATAATTGACACTGTTTTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR TCA 72 bp | TATTTATTATTATGGAACAATGAAATCCTAGATACTTaGGTGCTACCAGCCAATGAGGATAGTCATCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YLLLWNNEILDT*VLPANEDSHLR Trigger: TCTGAGATGACTATCCTCATTGGCTGGTAGCACTCAAGTATCTAGGATTTCATTGTTCCATAATAATAAATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAATTTCCTGACTGCTCGTaGAGAGATGAGTCACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKFPDCS*RDESPT Trigger: GGTGGGTGACTCATCTCTTCACGAGCAGTCAGGAAA...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTGGCTTCTCCTCAGTGTaGACTCTGCTGTGTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSGFSSV*TLLCFL Trigger: GAGGAAACACAGCAGAGTTCACACTGAGGAGAAGCC...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAACTGCTCGTGAAGAGATaGGTCACCCACCATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKLLVKR*VTHHFC Trigger: ACAGAAATGGTGGGTGACTCATCTCTTCACGAGCAG...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR GCA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAACCTCAGTGTGAACTCTaGTGTGTTTCCTCAGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKPQCEL*CVSSVV Trigger: CACGACTGAGGAAACACAGCAGAGTTCACACTGAGG...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CAA 72 bp | CACTGGGCTCAAGATTATAGCTCAGTGGCAGAGTGCTaGCCTCAGCTGGGCTTGTTTGATCCTCAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: HWAQDYSSVAEC*PQLGLFDPQQS Trigger: TGATTGCTGAGGATCAAACAAGCCCAGCTGAGGCAAGCACTCTGCCACTGAGCTATAATCTTGAGCCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTTGTAGTTCCAATTGTTaGGGAACAGCACTTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSCSSNC*GTALSA Trigger: GGCGGAAAGTGCTGTTCCTCAACAATTGGAACTACA...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CAA 72 bp | GGAAACGGTAGCTCAGTAACTGAGTGCTTGCCTAGCTaGCATGATGTTCTAGGTCAATCCTCAGCACTACCC | + |
|
Preference number: 4 (lower is better) Translates to: GNGSSVTECLPS*HDVLGQSSALP Trigger: GGGTAGTGCTGAGGATTGACCTAGAACATCATGCAAGCTAGGCAAGCACTCAGTTACTGAGCTACCGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CAA 72 bp | GCTAAAACCAGTCAGTTCGTTTTACATCTGGCTGTTTaGGTGGCGCTGAGGACTGAAACCACAGCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKTSQFVLHLAV*VALRTETTALC Trigger: GCACAAGGCTGTGGTTTCAGTCCTCAGCGCCACCAAAACAGCCAGATGTAAAACGAACTGACTGGTTTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR GCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTATCCTGGTAACAATTTaGCTGGTTGTCAGTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSILVTI*LVVSHR Trigger: ACGGTGACTGACAACCAGGCAAATTGTTACCAGGAT...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | GACTGTGTGGGTCCCTGGGATCAAACTCAGTTCCTGCTCACAAGCACCTTTACCCTAGGAATGAATAACTaGCATCCTACTGAAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DCVGPWDQTQFLLTSTFTLGMNN*HPTEVK Trigger: CTTGACTTCAGTAGGATGTCAGTTATTCATTCCTAG...GGTAAAGGTGCTTGTGAGCAGGAACTGAGTTTGATCCCAGGGACCCACACAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTGGCTTTTCGCCACTGTaGATTTTCAGATGTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSGFSPL*IFRCLV Trigger: CACTAAACATCTGAAAATTCACAGTGGCGAAAAGCC...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR GCA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTTTGAGAATTGGAAGATaGATAGCAAGGCCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSLRIGR*IARPVG Trigger: TCCTACAGGCCTTGCTATGCATCTTCCAATTCTCAA...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTTGTTTGGAGTCAGACTaGAGAGTTTTCCACACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSVPAHKHLYLLSHFASSCLESD*RVFHTD Trigger: ATCAGTGTGGAAAACTCTTCAGTCTGACTCCAAACA...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGTTCTATCCTCAGATCATCAATCTCAACCAACCTGAGGAATATGGACAATCAGAACTGTATCCTTaGCTTTGCATGCTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQFYPQIINLNQPEEYGQSELYP*LCMLTS Trigger: AGAGGTGAGCATGCAAAGTCAAGGATACAGTTCTGA...TTGTCCATATTCCTCAGGTTGGTTGAGATTGATGATCTGAGGATAGAACTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGTTCTATCCTCAGATCATCAATCTCAACCAACCTGAGGAATATGGACAAGCAAGGCCTGTAGGATaGATAAAACCATTCCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PQFYPQIINLNQPEEYGQARPVG*IKPFPY Trigger: ATACGGGAATGGTTTTATTCATCCTACAGGCCTTGC...TTGTCCATATTCCTCAGGTTGGTTGAGATTGATGATCTGAGGATAGAACTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGTTCTATCCTCAGATCATCAATCTCAACCAACCTGAGGAATATGGACAAGGCTTTTCCCCAGTGTaGACTCTTATGTGTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQFYPQIINLNQPEEYGQGFSPV*TLMCSV Trigger: TACTGAACACATAAGAGTTCACACTGGGGAAAAGCC...TTGTCCATATTCCTCAGGTTGGTTGAGATTGATGATCTGAGGATAGAACTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR TCA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTATAATTCTCAAGCTCTaGATCGTCAATTGTAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSVPAHKHLYLLSHFASSIILKL*IVNCRL Trigger: CAACCTACAATTGACGATTCAGAGCTTGAGAATTAT...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR GCA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTGGGATTATTAAGGCATaGAAAATACTGAAAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSVPAHKHLYLLSHFASSGIIKA*KILKVL Trigger: AAGGACTTTCAGTATTTTGCATGCCTTAATAATCCC...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGTTCTATCCTCAGATCATCAATCTCAACCAACCTGAGGAATATGGACAAAGAATTTTTCTCCAGTaGACATTCCCATGGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: PQFYPQIINLNQPEEYGQRIFLQ*TFPWDY Trigger: ATAATCCCATGGGAATGTGCACTGGAGAAAAATTCT...TTGTCCATATTCCTCAGGTTGGTTGAGATTGATGATCTGAGGATAGAACTGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| 3UTR CAA 72 bp | AGCATGACTGTTCAGATAGGGTCTTTAGAATTTCATTaGATAGTCCAGGACAATGAGTGGAAACGTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMTVQIGSLEFH*IVQDNEWKRHS Trigger: GGAATGACGTTTCCACTCATTGTCCTGGACTATCAAATGAAATTCTAAAGACCCTATCTGAACAGTCATGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR CAA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAACATAGGTCCTCTTCATaGTGGTTTCCTGACTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKHRSSS*WFPDCS Trigger: CGAGCAGTCAGGAAACCACAATGAAGAGGACCTATG...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR CAA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAAACTGTATCCTTGACTTaGCATGCTCACCTCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKTVSLT*HAHLCV Trigger: AACACAGAGGTGAGCATGCAAAGTCAAGGATACAGT...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR CAA 90 bp | AACTCAGTTCCTGCTCACAAGCACCTTTACCTTCTGAGCCATTTTGCCAGCTCTCTCAGAACTGTATCCTaGACTTTGCATGCTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: NSVPAHKHLYLLSHFASSLRTVS*TLHAHL Trigger: GAGGTGAGCATGCAAAGTCAAGGATACAGTTCTGAG...AGAGCTGGCAAAATGGCTCAGAAGGTAAAGGTGCTTGTGAGCAGGAACTGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR CAA 90 bp | CTAATGTGTAGCAGTCCGTGCTCTCCTTTGACTGTGTGGGTCCCTGGGATCAAACCAGTAGAGGTTTCCTaGAGCAAAGAAAGAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LMCSSPCSPLTVWVPGIKPVEVS*SKERMS Trigger: AGACATTCTTTCTTTGCTCAAGGAAACCTCTACTGG...TTTGATCCCAGGGACCCACACAGTCAAAGGAGAGCACGGACTGCTACACATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS-3UTR CAA 90 bp | CCCCAGTTCTATCCTCAGATCATCAATCTCAACCAACCTGAGGAATATGGACAAGGCCATACCCTCACATaGATAGGGCTTCTCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PQFYPQIINLNQPEEYGQGHTLT*IGLLLS Trigger: ACTGAGGAGAAGCCCTATCAATGTGAGGGTATGGCC...TTGTCCATATTCCTCAGGTTGGTTGAGATTGATGATCTGAGGATAGAACTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS TCA 90 bp | TTAGAGTCACATAGGTCCTCTTCATTGTGGTTTCCTGACTGCTCGTaGAGAGATGAGTCACCCACCATTTCTGTTGCACTGGAACTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LESHRSSSLWFPDCS*RDESPTISVALELC Trigger: GCAAAGTTCCAGTGCAACAGAAATGGTGGGTGACTCATCTCTTCACGAGCAGTCAGGAAACCACAATGAAGAGGACCTATGTGACTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068296.8 ENSMUST00000174462.8 ENSMUST00000215908.2 |
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| CDS-3UTR CAA 90 bp | CTCCCAGATTATTTACCAGGCCCCAACTCCTCCCTGGGCACATTTGTCTTGTCTGCTTTCCAACATTCCTaGCAGTCACAGAATTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPDYLPGPNSSLGTFVLSAFQHS*QSQNFS Trigger: AGAAAAATTCTGTGACTGCAAGGAATGTTGGAAAGC...AGACAAGACAAATGTGCCCAGGGAGGAGTTGGGGCCTGGTAAATAATCTGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174462.8 |
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| CDS TCA 72 bp | TCTGAATCGTCAATTGTAGGTTGTAGTTCCAATTGTTaGGGAACAGCACTTTCCGCCACCTCGGACTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SESSIVGCSSNC*GTALSATSDSS Trigger: AGAAGAGTCCGAGGTGGCGGAAAGTGCTGTTCCTCAACAATTGGAACTACAACCTACAATTGACGATTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068296.8 ENSMUST00000174462.8 ENSMUST00000215908.2 |
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| CDS CCA 72 bp | CTTCTCATTTGTGCTAGTGCTCGGGTACATGATGTTTaGAGTCAGACTGAAGAGTTTTCCACACTGATTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLICASARVHDV*SQTEEFSTLIK Trigger: CTTAATCAGTGTGGAAAACTCTTCAGTCTGACTCCAAACATCATGTACCCGAGCACTAGCACAAATGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068296.8 ENSMUST00000174462.8 |
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| CDS TCA 72 bp | TTGAGAATTGGAAGATGCATAGCAAGGCCTGTAGGATaGATAAAACCATTCCCGTATTTACTCCAGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRIGRCIARPVG*IKPFPYLLQSK Trigger: CTTTGACTGGAGTAAATACGGGAATGGTTTTATTCATCCTACAGGCCTTGCTATGCATCTTCCAATTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068296.8 ENSMUST00000174462.8 |
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