Pregenerated sensors for ZFP263 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022529Ensembl transcript IDs: ENSMUST00000023176.5, ENSMUST00000161630.8, ENSMUST00000162207.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCTGGAACTGGGTTTCTGGGGTTCATGCCTTCCTTGCAGGTCTaGACACTTGAATCCCACAGCTTCTCTCCTTGCTCCACGTGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: TPGTGFLGFMPSLQV*TLESHSFSPCSTWV Trigger: CACCCACGTGGAGCAAGGAGAGAAGCTGTGGGATTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTCCAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 90 bp | ATGTCAATAAGCACTCCTGTCGAACTACTCAGAGGGGTGTTGCAGTaGCAGAACTGGACTGCCCAGGACTTCCCAGCCAGGGCCCTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: MSISTPVELLRGVLQ*QNWTAQDFPARALK Trigger: TTTTAGGGCCCTGGCTGGGAAGTCCTGGGCAGTCCAGTTCTGCCACTGCAACACCCCTCTGAGTAGTTCGACAGGAGTGCTTATTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR CCA 90 bp | TCAAGTCTTCCCTGCTCAGGACTCCAGGGCACCTCCCTTCTAGCCTaGCCAGGCAATAGTACTGGAGGATGGGTACTTTCAGGAGAAACA | + |
|
Preference number: 1 (lower is better) Translates to: SSLPCSGLQGTSLLA*PGNSTGGWVLSGET Trigger: TGTTTCTCCTGAAAGTACCCATCCTCCAGTACTATTGCCTGGCCAGGCTAGAAGGGAGGTGCCCTGGAGTCCTGAGCAGGGAAGACTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 90 bp | TCTCTCCTTGCTCCACGTGGGTGCTTGAGACCTCCTGACTGGGAATaGTGGACTCTAGAGTCCCCGAGTTCTCATAGCTATCTTGTACCA | + |
|
Preference number: 1 (lower is better) Translates to: SLLAPRGCLRPPDWE*WTLESPSSHSYLVP Trigger: TGGTACAAGATAGCTATGAGAACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGCAAGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 90 bp | ACAGCTTCTCTCCTTGCTCCACGTGGGTGCTTGAGACCTCCTGACTaGGAATGCTGGACTCTAGAGTCCCCGAGTTCTCATAGCTATCTT | + |
|
Preference number: 1 (lower is better) Translates to: TASLLAPRGCLRPPD*ECWTLESPSSHSYL Trigger: AAGATAGCTATGAGAACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGCAAGGAGAGAAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 90 bp | TCTCTTACTAGGATCCTGATGGTCCCACTCCTGAGAGATATACATTaGCATGTCCTCCAGGCTCTCGGGCAACTGGGTCCCAGTCATATC | + |
|
Preference number: 1 (lower is better) Translates to: SLTRILMVPLLRDIH*HVLQALGQLGPSHI Trigger: GATATGACTGGGACCCAGTTGCCCGAGAGCCTGGAGGACATGGCAATGTATATCTCTCAGGAGTGGGACCATCAGGATCCTAGTAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 90 bp | ACTTTTCCACTCCTGGAACTGGGTTTCTGGGGTTCATGCCTTCCTTaGAGGTCTGGACACTTGAATCCCACAGCTTCTCTCCTTGCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: TFPLLELGFWGSCLP*RSGHLNPTASLLAP Trigger: TGGAGCAAGGAGAGAAGCTGTGGGATTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTaGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTTAATGTCA | + |
|
Preference number: 1 (lower is better) Translates to: GLVDLKLVSQDLALL*SQGPQEPKLSCLMS Trigger: TGACATTAAGCAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR CCA 90 bp | CTCCTTGCTCCACGTGGGTGCTTGAGACCTCCTGACTGGGAATGCTaGACTCTAGAGTCCCCGAGTTCTCATAGCTATCTTGTACCATAT | + |
|
Preference number: 1 (lower is better) Translates to: LLAPRGCLRPPDWEC*TLESPSSHSYLVPY Trigger: ATATGGTACAAGATAGCTATGAGAACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGCAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 90 bp | AACTCGGAATTTGGGGAGACTGAAGGTGGAGGACCACCACTGTTCTaGAGCCAAGCTCAACTACACACTGAGTCAGTTAGCTTGAGCTAC | + |
|
Preference number: 1 (lower is better) Translates to: NSEFGETEGGGPPLF*SQAQLHTESVSLSY Trigger: GTAGCTCAAGCTAACTGACTCAGTGTGTAGTTGAGCTTGGCTGCAGAACAGTGGTGGTCCTCCACCTTCAGTCTCCCCAAATTCCGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 90 bp | TCCAGTGGCAAAGGCTCCTCCAAAAGCACTTCTGCTCCCCGCCCTTaGTTTGTGACCTGTTCTAGATGCTTCCACGTTTCACTACTAGAT | + |
|
Preference number: 1 (lower is better) Translates to: SSGKGSSKSTSAPRP*FVTCSRCFHVSLLD Trigger: ATCTAGTAGTGAAACGTGGAAGCATCTAGAACAGGTCACAAACCAAGGGCGGGGAGCAGAAGTGCTTTTGGAGGAGCCTTTGCCACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 90 bp | CAGGGCACCTCCCTTCTAGCCTGGCCAGGCAATAGTACTGGAGGATaGGTACTTTCAGGAGAAACAGACTCAACATTTCTTTCTTGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: QGTSLLAWPGNSTGG*VLSGETDSTFLSWF Trigger: GAACCAAGAAAGAAATGTTGAGTCTGTTTCTCCTGAAAGTACCCATCCTCCAGTACTATTGCCTGGCCAGGCTAGAAGGGAGGTGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 90 bp | AAAAGCACTTCTGCTCCCCGCCCTTGGTTTGTGACCTGTTCTAGATaGTTCCACGTTTCACTACTAGATAAGGTGAACTTATCAGGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: KSTSAPRPWFVTCSR*FHVSLLDKVNLSGC Trigger: GCAGCCTGATAAGTTCACCTTATCTAGTAGTGAAACGTGGAAGCATCTAGAACAGGTCACAAACCAAGGGCGGGGAGCAGAAGTGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 90 bp | CCACACAAGGCACACAAATGGAGTTTCTTGGGCTGTTCTTTTGCTTaGACCAGTCCTTTACAACTTGGGGTTCCCACTAAAGACTCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: PHKAHKWSFLGCSFA*TSPLQLGVPTKDSS Trigger: AGAGGAGTCTTTAGTGGGAACCCCAAGTTGTAAAGGACTGGTGCAAGCAAAAGAACAGCCCAAGAAACTCCATTTGTGTGCCTTGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 90 bp | AACAGACTCAACATTTCTTTCTTGGTTCTCAAACTTTTCCACTCCTaGAACTGGGTTTCTGGGGTTCATGCCTTCCTTGCAGGTCTGGAC | + |
|
Preference number: 1 (lower is better) Translates to: NRLNISFLVLKLFHS*NWVSGVHAFLAGLD Trigger: GTCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGTTTGAGAACCAAGAAAGAAATGTTGAGTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 90 bp | AGGTTTGAGTTATTAGAAAAGTTCTTGCCACACAAGGCACACAAATaGAGTTTCTTGGGCTGTTCTTTTGCTTGCACCAGTCCTTTACAA | + |
|
Preference number: 1 (lower is better) Translates to: RFELLEKFLPHKAHK*SFLGCSFACTSPLQ Trigger: TTGTAAAGGACTGGTGCAAGCAAAAGAACAGCCCAAGAAACTCCATTTGTGTGCCTTGTGTGGCAAGAACTTTTCTAATAACTCAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCTCAGTCTCCATTGGCTCCAGCTTGAAGCTCGGTGACTCTCCTGCTGTTTCCAGTGGCACATGCCTGTaGGAATCAGCAGTGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RSVSIGSSLKLGDSPAVSSGTCL*ESAVGR Trigger: CCTCCCCACTGCTGATTCCCACAGGCATGTGCCACT...GGAAACAGCAGGAGAGTCACCGAGCTTCAAGCTGGAGCCAATGGAGACTGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGTCTGCTCCCCGCCCTTaGTTTGTGACCTGTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGPSPSLVSRASGAQTLLSAPRP*FVTCSR Trigger: TCTAGAACAGGTCACAAACCAAGGGCGGGGAGCAGA...CAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAACAGCAGTGGGGAGGCTaGAGCAGGAGGATTGCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GLVDLKLVSQDLALLWSQQQWGG*SRRIAS Trigger: CGAGGCAATCCTCCTGCTTCAGCCTCCCCACTGCTG...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTCTCGGGCAACTGGGTCCCAGTCATATCCTTATCTTCCACATTCCCTTCCCATTGGCTCCAGCTTaGAGCTCGGTGACTCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QALGQLGPSHILIFHIPFPLAPA*SSVTLL Trigger: CAGGAGAGTCACCGAGCTTCAAGCTGGAGCCAATGG...GAAGGGAATGTGGAAGATAAGGATATGACTGGGACCCAGTTGCCCGAGAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCATGTCCTCCAGGCTCTCGGGCAACTGGGTCCCAGTCATATCCTTATCTTCTTGCAGTGGCAGAACTaGACTGCCCAGGACTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: CHVLQALGQLGPSHILIFLQWQN*TAQDFP Trigger: TGGGAAGTCCTGGGCAGTCCAGTTCTGCCACTGCAA...GAAGATAAGGATATGACTGGGACCCAGTTGCCCGAGAGCCTGGAGGACATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CAA 90 bp | GAACTGGGTTTCTGGGGTTCATGCCTTCCTTGCAGGTCTGGACACTaGAATCCCACAGCTTCTCTCCTTGCTCCACGTGGGTGCTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ELGFWGSCLPCRSGH*NPTASLLAPRGCLR Trigger: TCTCAAGCACCCACGTGGAGCAAGGAGAGAAGCTGTGGGATTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCATGACTTGTAAGACGTaGGCTCCGAGAGAAGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SQDLALLWSQGPQEPKLSMTCKT*APREAF Trigger: GAAAGCTTCTCTCGGAGCTCACGTCTTACAAGTCAT...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCTCTCGGGCAACTGGGTCCCAGTCATATCCTTATCTTCCACATTCCCTTCGTGAACTTATCAGGCTaGGACCATAGCCCCTCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QALGQLGPSHILIFHIPFVNLSG*DHSPSV Trigger: CACCGAGGGGCTATGGTCGCAGCCTGATAAGTTCAC...GAAGGGAATGTGGAAGATAAGGATATGACTGGGACCCAGTTGCCCGAGAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCCTTGGGCTGTTCTTTTaGTTGCACCAGTCCTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: SQDLALLWSQGPQEPKLSLGLFF*LHQSFT Trigger: TGTAAAGGACTGGTGCAAGCAAAAGAACAGCCCAAG...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR TCA 90 bp | CGCTCAGTCTCCATTGGCTCCAGCTTGAAGCTCGGTGACTCTCCTGCTGTTTCCTCACAAATAAGGGGTTaGAGCCAGAGGTATCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RSVSIGSSLKLGDSPAVSSQIRG*SQRYPQ Trigger: TTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGA...GGAAACAGCAGGAGAGTCACCGAGCTTCAAGCTGGAGCCAATGGAGACTGAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCGAGCCCAAACTCTCCTaGTTAATGTCACAAATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SQDLALLWSQGPQEPKLSEPKLS*LMSQIR Trigger: CCTTATTTGTGACATTAAGCAGGAGAGTTTGGGCTC...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCTGTCATCAAGTCTTCCCTGCTCAGGACTCCAGGGCACCTCCCTTCTAGCACCATAGCCCCTCGGTaGTTAGCTGTTTTTCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: FSVIKSSLLRTPGHLPSSTIAPR*LAVFQS Trigger: ACTCTGAAAAACAGCTAAGCACCGAGGGGCTATGGT...GCTAGAAGGGAGGTGCCCTGGAGTCCTGAGCAGGGAAGACTTGATGACAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTCTTTCTTGGTTCTCAAACTTTTCCACTCCTGGAACTGGGTTTCTGGGGTTGGGTCTAGCAGCTCCTaGAGCCTGGGGCCAGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: ISFLVLKLFHSWNWVSGVGSSSS*SLGPGL Trigger: AAGCCCTGGCCCCAGGCTGCAGGAGCTGCTAGACCC...AACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGTTTGAGAACCAAGAAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTCCGAGAGAAACTTTTaGCACATTCACTACAGCGAT | + |
|
Preference number: 2 (lower is better) Translates to: SQDLALLWSQGPQEPKLSSERNF*HIHYSD Trigger: ATCGCTGTAGTGAATGTGGCAAAAGTTTCTCTCGGA...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CAA 90 bp | CTCCACTCTGTGGTTTGTAAGAAAGGGGGCACTGTCATTCATGCCTaGACCACACTCAGGGAAAGGGTCGAGTCTCTCTTTCTCATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LHSVVCKKGGTVIHA*TTLRERVESLFLMS Trigger: ACTCATGAGAAAGAGAGACTCGACCCTTTCCCTGAGTGTGGTCAAGGCATGAATGACAGTGCCCCCTTTCTTACAAACCACAGAGTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTGGTTCTCAAACTTTTCCACTCCTGGAACTGGGTTTCTGGGGTTCATGCCCTGACTGGGAATGCTaGACTCTAGAGTCCCCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: FLGSQTFPLLELGFWGSCPDWEC*TLESPS Trigger: ACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGG...GCATGAACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGTTTGAGAACCAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTGTATCTGATGAAATCATGGAACCCTCCACTCATAATCATGTCTACAGAGGCCTGGGAGTCCCTTTaGGGGCTGGGGTCTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FLYLMKSWNPPLIIMSTEAWESL*GLGSSS Trigger: GCTGCTAGACCCCAGCCCCCAAAGGGACTCCCAGGC...CTCTGTAGACATGATTATGAGTGGAGGGTTCCATGATTTCATCAGATACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTAGAGGGGTGTTGCAGTaGCAGAACTGGACTGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TSKIHQSGQRISALDKTVRGVLQ*QNWTAQ Trigger: CTGGGCAGTCCAGTTCTGCCACTGCAACACCCCTCT...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR CAA 90 bp | CCACTGTTCTGCAGCCAAGCTCAACTACACACTGAGTCAGTTAGCTaGAGCTACGTAAGACTTTGTCACAAAACAAACCCCTCAAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PLFCSQAQLHTESVS*SYVRLCHKTNPSKQ Trigger: CTGCTTTGAGGGGTTTGTTTTGTGACAAAGTCTTACGTAGCTCAAGCTAACTGACTCAGTGTGTAGTTGAGCTTGGCTGCAGAACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTACTCAGAGGGGTGTTaGAGTGGCAGAACTGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: TSKIHQSGQRISALDKTVYSEGC*SGRTGL Trigger: CAGTCCAGTTCTGCCACTGCAACACCCCTCTGAGTA...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTGTATCTGATGAAATCATGGAACCCTCCACTCATAATCATGTCTACAGAGAGAGGGGTGTTGCAGTaGCAGAACTGGACTGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: FLYLMKSWNPPLIIMSTERGVLQ*QNWTAQ Trigger: CTGGGCAGTCCAGTTCTGCCACTGCAACACCCCTCT...CTCTGTAGACATGATTATGAGTGGAGGGTTCCATGATTTCATCAGATACAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR CAA 90 bp | TGGAGGATGGGTACTTTCAGGAGAAACAGACTCAACATTTCTTTCTaGGTTCTCAAACTTTTCCACTCCTGGAACTGGGTTTCTGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: WRMGTFRRNRLNISF*VLKLFHSWNWVSGV Trigger: AACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGTTTGAGAACCAAGAAAGAAATGTTGAGTCTGTTTCTCCTGAAAGTACCCATCCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAACTAGTTTTTCACCTCTaGACCTCCCTTAAAATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GLVDLKLVSQDLALLWSQLVFHL*TSLKIS Trigger: ACTTATTTTAAGGGAGGTGCAGAGGTGAAAAACTAG...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAACAAAATACACCAAAGTaGGCAAAGAATATCAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GLVDLKLVSQDLALLWSQQNTPK*AKNISS Trigger: AGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTG...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCGGAATTTGGGGAGACTaGAGGTGGAGGACCACCACT | + |
|
Preference number: 2 (lower is better) Translates to: ILKIDAINTRLIQHPNHTGIWGD*RWRTTT Trigger: AGTGGTGGTCCTCCACCTTCAGTCTCCCCAAATTCC...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTGGACCACCACTGTTCTaGAGCCAAGCTCAACTACAC | + |
|
Preference number: 2 (lower is better) Translates to: SSKLMRLILDLYSIQTIPGPPLF*SQAQLH Trigger: GTGTAGTTGAGCTTGGCTGCAGAACAGTGGTGGTCC...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACTTATACAGCATCCAAACCATACCTGGGTCAAAATAAAGGTTGATGCATCTCTAGTTTTTCACCTCTaGACCTCCCTTAAAATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RLIQHPNHTWVKIKVDASLVFHL*TSLKIS Trigger: ACTTATTTTAAGGGAGGTGCAGAGGTGAAAAACTAG...AGATGCATCAACCTTTATTTTGACCCAGGTATGGTTTGGATGCTGTATAAGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTGTATCTGATGAAATCATGGAACCCTCCACTCATAATCATGTCTACAGAGCTAGTTTTTCACCTCTaGACCTCCCTTAAAATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FLYLMKSWNPPLIIMSTELVFHL*TSLKIS Trigger: ACTTATTTTAAGGGAGGTGCAGAGGTGAAAAACTAG...CTCTGTAGACATGATTATGAGTGGAGGGTTCCATGATTTCATCAGATACAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACATTATTCCCAGACAGTaGTTTAGCCAACAGAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RGILKIDAINTRLIQHPNIIPRQ*FSQQKN Trigger: GTTTTTCTGTTGGCTAAAGCACTGTCTGGGAATAAT...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTCAAAATACACCAAAGTaGGCAAAGAATATCAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SSKLMRLILDLYSIQTIPQNTPK*AKNISS Trigger: AGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTG...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR CCA 72 bp | GTCGAACTACTCAGAGGGGTGTTGCAGTGGCAGAACTaGACTGCCCAGGACTTCCCAGCCAGGGCCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VELLRGVLQWQN*TAQDFPARALK Trigger: TTTTAGGGCCCTGGCTGGGAAGTCCTGGGCAGTCCAGTTCTGCCACTGCAACACCCCTCTGAGTAGTTCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR CCA 72 bp | CCCTGCTCAGGACTCCAGGGCACCTCCCTTCTAGCCTaGCCAGGCAATAGTACTGGAGGATGGGTACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PCSGLQGTSLLA*PGNSTGGWVLS Trigger: TGAAAGTACCCATCCTCCAGTACTATTGCCTGGCCAGGCTAGAAGGGAGGTGCCCTGGAGTCCTGAGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR TCA 72 bp | TCGCTCAGTCTCCATTGGCTCCAGCTTGAAGCTCGGTaGCTCTCCTGCTGTTTCCAGTGGCAAAGGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSLHWLQLEAR*LSCCFQWQRLL Trigger: GAGGAGCCTTTGCCACTGGAAACAGCAGGAGAGTCACCGAGCTTCAAGCTGGAGCCAATGGAGACTGAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR TCA 72 bp | TTCTCTCCTTGCTCCACGTGGGTGCTTGAGACCTCCTaGCTGGGAATGCTGGACTCTAGAGTCCCCGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FSPCSTWVLETS*LGMLDSRVPEF Trigger: GAACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGCAAGGAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | AGGATCCTGATGGTCCCACTCCTGAGAGATATACATTaGCATGTCCTCCAGGCTCTCGGGCAACTGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RILMVPLLRDIH*HVLQALGQLGP Trigger: GGGACCCAGTTGCCCGAGAGCCTGGAGGACATGGCAATGTATATCTCTCAGGAGTGGGACCATCAGGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | CTCCTTGCTCCACGTGGGTGCTTGAGACCTCCTGACTaGGAATGCTGGACTCTAGAGTCCCCGAGTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLAPRGCLRPPD*ECWTLESPSSH Trigger: ATGAGAACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGCAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATGTCCTCCAGGCTCTCGGGCAACTGGGTCCCAGTCATATCCTTATCTTCTCCATTGGCTCCAGCTaGAAGCTCGGTGACTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CHVLQALGQLGPSHILIFSIGSS*KLGDSP Trigger: AGGAGAGTCACCGAGCTTCAAGCTGGAGCCAATGGA...GAAGATAAGGATATGACTGGGACCCAGTTGCCCGAGAGCCTGGAGGACATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR TCA 72 bp | TCTGGGGTTCATGCCTTCCTTGCAGGTCTGGACACTTaGATCCCACAGCTTCTCTCCTTGCTCCACGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SGVHAFLAGLDT*IPQLLSLLHVG Trigger: ACCCACGTGGAGCAAGGAGAGAAGCTGTGGGATTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | ACTACTCAGAGGGGTGTTGCAGTGGCAGAACTGGACTaGCCAGGACTTCCCAGCCAGGGCCCTAAAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TTQRGVAVAELD*PGLPSQGPKTK Trigger: TTTTGTTTTAGGGCCCTGGCTGGGAAGTCCTGGGCAGTCCAGTTCTGCCACTGCAACACCCCTCTGAGTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR GCA 72 bp | GCTCCACGTGGGTGCTTGAGACCTCCTGACTGGGAATaGTGGACTCTAGAGTCCCCGAGTTCTCATAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: APRGCLRPPDWE*WTLESPSSHSY Trigger: ATAGCTATGAGAACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | TTGAATCCCACAGCTTCTCTCCTTGCTCCACGTGGGTaGTTGAGACCTCCTGACTGGGAATGCTGGACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LNPTASLLAPRG*LRPPDWECWTL Trigger: TAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGCAAGGAGAGAAGCTGTGGGATTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | CTCCTGGAACTGGGTTTCTGGGGTTCATGCCTTCCTTaGAGGTCTGGACACTTGAATCCCACAGCTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLELGFWGSCLP*RSGHLNPTASL Trigger: GAGAGAAGCTGTGGGATTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | CCACGTGGGTGCTTGAGACCTCCTGACTGGGAATGCTaGACTCTAGAGTCCCCGAGTTCTCATAGCTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRGCLRPPDWEC*TLESPSSHSYL Trigger: AAGATAGCTATGAGAACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTGTCATCAAGTCTTCCCTGCTCAGGACTCCAGGGCACCTCCCTTCTAGCGTCACAAATAAGGGGTaGAAGCCAGAGGTATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FSVIKSSLLRTPGHLPSSVTNKG*KPEVSS Trigger: TGAGGATACCTCTGGCTTCAACCCCTTATTTGTGAC...GCTAGAAGGGAGGTGCCCTGGAGTCCTGAGCAGGGAAGACTTGATGACAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | ACTTTTCCACTCCTGGAACTGGGTTTCTGGGGTTCATaGCTTCCTTGCAGGTCTGGACACTTGAATCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: TFPLLELGFWGS*LPCRSGHLNPT Trigger: TGTGGGATTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | AAAGGCTCCTCCAAAAGCACTTCTGCTCCCCGCCCTTaGTTTGTGACCTGTTCTAGATGCTTCCACGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGSSKSTSAPRP*FVTCSRCFHVS Trigger: TGAAACGTGGAAGCATCTAGAACAGGTCACAAACCAAGGGCGGGGAGCAGAAGTGCTTTTGGAGGAGCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | GGTTCTCAAACTTTTCCACTCCTGGAACTGGGTTTCTaGGGTTCATGCCTTCCTTGCAGGTCTGGACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSQTFPLLELGF*GSCLPCRSGHL Trigger: CAAGTGTCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGTTTGAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | ATATACATTGCCATGTCCTCCAGGCTCTCGGGCAACTaGGTCCCAGTCATATCCTTATCTTCCACATTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: IYIAMSSRLSGN*VPVISLSSTFP Trigger: AGGGAATGTGGAAGATAAGGATATGACTGGGACCCAGTTGCCCGAGAGCCTGGAGGACATGGCAATGTATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | TCTTTCTTGGTTCTCAAACTTTTCCACTCCTGGAACTaGGTTTCTGGGGTTCATGCCTTCCTTGCAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFLVLKLFHSWN*VSGVHAFLAGL Trigger: CAGACCTGCAAGGAAGGCATGAACCCCAGAAACCCAGTTCCAGGAGTGGAAAAGTTTGAGAACCAAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR TCA 72 bp | CTTATGAGCTTCCTCTCCTATGTGTGTTCTGTGCAGTaGCAGAAAATGTGGGTGTCCACCAAAGACTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LMSFLSYVCSVQ*QKMWVSTKDFT Trigger: GGTGAAGTCTTTGGTGGACACCCACATTTTCTGTCACTGCACAGAACACACATAGGAGAGGAAGCTCATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | TCTGCTCCCCGCCCTTGGTTTGTGACCTGTTCTAGATaGTTCCACGTTTCACTACTAGATAAGGTGAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: SAPRPWFVTCSR*FHVSLLDKVNL Trigger: TAAGTTCACCTTATCTAGTAGTGAAACGTGGAAGCATCTAGAACAGGTCACAAACCAAGGGCGGGGAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | TCCCTTCTAGCCTGGCCAGGCAATAGTACTGGAGGATaGGTACTTTCAGGAGAAACAGACTCAACATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLAWPGNSTGG*VLSGETDSTFL Trigger: AAGAAATGTTGAGTCTGTTTCTCCTGAAAGTACCCATCCTCCAGTACTATTGCCTGGCCAGGCTAGAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | GCACACAAATGGAGTTTCTTGGGCTGTTCTTTTGCTTaGACCAGTCCTTTACAACTTGGGGTTCCCACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: AHKWSFLGCSFA*TSPLQLGVPTK Trigger: TTTAGTGGGAACCCCAAGTTGTAAAGGACTGGTGCAAGCAAAAGAACAGCCCAAGAAACTCCATTTGTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTGTCCTTTGGTGTCTGTaGAGGTTGGAGTTGCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSKIHQSGQRISALDKTVVLWCL*RLELQE Trigger: CTCTTGCAACTCCAACCTCAACAGACACCAAAGGAC...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTAAATTTAAGGGCTTGTaGACCTTAAATTGGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSKIHQSGQRISALDKTVKFKGL*TLNWCP Trigger: GGGACACCAATTTAAGGTCAACAAGCCCTTAAATTT...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATGAGCTACGTAAGACTTaGTCACAAAACAAACCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GILKIDAINTRLIQHPNHELRKT*SQNKPL Trigger: GAGGGGTTTGTTTTGTGACAAAGTCTTACGTAGCTC...ATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR GCA 72 bp | TTTCAGAGTTCAATTAGCAGAGATCCAGTTCTGTATTaGAAACTATTGACTAAGATATGCTGGGTGTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: FQSSISRDPVLY*KLLTKICWVLS Trigger: GGATAACACCCAGCATATCTTAGTCAATAGTTTGCAATACAGAACTGGATCTCTGCTAATTGAACTCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CCA 72 bp | ATTAATACTAGACTTATACAGCATCCAAACCATACCTaGGTCAAAATAAAGGTTGATGCATCTGAAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: INTRLIQHPNHT*VKIKVDASENR Trigger: CCTGTTTTCAGATGCATCAACCTTTATTTTGACCCAGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| 3UTR TCA 72 bp | CAATTAGCAGAGATCCAGTTCTGTATTGCAAACTATTaGCTAAGATATGCTGGGTGTTATCCACTAAATATA | + |
|
Preference number: 3 (lower is better) Translates to: QLAEIQFCIANY*LRYAGCYPLNI Trigger: TATATTTAGTGGATAACACCCAGCATATCTTAGTCAATAGTTTGCAATACAGAACTGGATCTCTGCTAATTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTTCTTCGCCGCTCTCTaGGCGCAGCTCCTGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQDLALLWSQGPQEPKLSFFAAL*AQLLHP Trigger: AGGGTGCAGGAGCTGCGCCCAGAGAGCGGCGAAGAA...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGCTGTTTCCAGTGGCAAAGGCTCCTCCAAAAGCACTTCTGCTCCCCGTTCTTCGCCGCTCTCTaGGCGCAGCTCCTGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCCFQWQRLLQKHFCSPFFAAL*AQLLHP Trigger: AGGGTGCAGGAGCTGCGCCCAGAGAGCGGCGAAGAA...CGGGGAGCAGAAGTGCTTTTGGAGGAGCCTTTGCCACTGGAAACAGCAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCCTCCACAAGAGTGACTaGTTCTTCGCCGCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQDLALLWSQGPQEPKLSLHKSD*FFAALW Trigger: CCAGAGAGCGGCGAAGAAGCAGTCACTCTTGTGGAG...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTCATCAAGTCTTCCCTaGTCAGGACTCCAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQDLALLWSQGPQEPKLSSSSLP*SGLQGT Trigger: GGTGCCCTGGAGTCCTGAGCAGGGAAGACTTGATGA...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTGTCATTCATGCCTTaGCCACACTCAGGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPSPSLVSRASGAQTLLLSFMP*PHSGKG Trigger: CCCTTTCCCTGAGTGTGGTCAAGGCATGAATGACAG...CAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGATCCGGTTGGAACTGTaGGAGAAACTGTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PGPSPSLVSRASGAQTLLIRLEL*EKLSPH Trigger: GTGTGGAGACAGTTTCTCTCACAGTTCCAACCGGAT...CAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCGTAAGGTGCATGCCCTaGCGGAAACTTTTCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SQDLALLWSQGPQEPKLSVRCMP*RKLFPQ Trigger: TTGTGGGAAAAGTTTCCGGCAGGGCATGCACCTTAC...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCGGTGACGAAGCAGGTTaGAGCTGTGAGCAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SQDLALLWSQGPQEPKLSGDEAG*SCEQRS Trigger: AGATCTTTGCTCACAGCTCCAACCTGCTTCGTCACC...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| 3UTR CAA 72 bp | AATCCCACAGCTTCTCTCCTTGCTCCACGTGGGTGCTaGAGACCTCCTGACTGGGAATGCTGGACTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPTASLLAPRGC*RPPDWECWTLE Trigger: CTCTAGAGTCCAGCATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGCAAGGAGAGAAGCTGTGGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTGAGAGATATACATTaGCATGTCCTCCAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGPSPSLVSRASGAQTLLLRDIH*HVLQAL Trigger: GAGAGCCTGGAGGACATGGCAATGTATATCTCTCAG...CAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCGGTGACGAATCCGGTTaGAACTGTGAGAGAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQDLALLWSQGPQEPKLSGDESG*NCERNC Trigger: ACAGTTTCTCTCACAGTTCCAACCGGATTCGTCACC...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTCTCCGGGCTGGGCTCTaGCTCAGGCGGGGGTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKIHQSGQRISALDKTVLRAGL*LRRGYL Trigger: GAGGTACCCCCGCCTGAGCCAGAGCCCAGCCCGGAG...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAAGCAGGTCTGGACACTTaGATCCCACAGCTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVDLKLVSQDLALLWSQAGLDT*IPQLLS Trigger: GGAGAGAAGCTGTGGGATTCAAGTGTCCAGACCTGC...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGGTGAGGTGGGTATTTTaGCTGAAGCATTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGPSPSLVSRASGAQTLLVRWVF*LKHFPH Trigger: ATGTGGAAAATGCTTCAGTCAAAATACCCACCTCAC...CAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAACTCCAAAAGCACTTCTaGTCCCCGCCCTTGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVDLKLVSQDLALLWSQLQKHF*SPPLVC Trigger: ACAAACCAAGGGCGGGGAGCAGAAGTGCTTTTGGAG...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CCA 90 bp | CTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTTAATGTCACAAATATCGCTCAGTCTCCATTaGCTCCAGCTTGAAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWSQGPQEPKLSCLMSQISLSLH*LQLEAR Trigger: CCGAGCTTCAAGCTGGAGCCAATGGAGACTGAGCGA...TATTTGTGACATTAAGCAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTTAATGTCACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATTGATGGCCTGGGAGTCCCTTTaGGGGCTGGGGTCTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNVTNKGLKPEVSSKLMAWESL*GLGSSS Trigger: GCTGCTAGACCCCAGCCCCCAAAGGGACTCCCAGGC...CATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAAGTAAGGTGCATGCCCTaGCGGAAACTTTTCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVDLKLVSQDLALLWSQVRCMP*RKLFPQ Trigger: TTGTGGGAAAAGTTTCCGGCAGGGCATGCACCTTAC...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| 3UTR CAA 72 bp | GTGGTTTGTAAGAAAGGGGGCACTGTCATTCATGCCTaGACCACACTCAGGGAAAGGGTCGAGTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVCKKGGTVIHA*TTLRERVESLF Trigger: AAAGAGAGACTCGACCCTTTCCCTGAGTGTGGTCAAGGCATGAATGACAGTGCCCCCTTTCTTACAAACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTTAATGTCACAAATAGTGTGTTCTGTGCAGTaGCAGAAAATGTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSQGPQEPKLSCLMSQIVCSVQ*QKMWVS Trigger: GGACACCCACATTTTCTGTCACTGCACAGAACACAC...TATTTGTGACATTAAGCAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAATGTCACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATTGATGCCATTGGCTCCAGCTTaGAGCTCGGTGACTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLNVTNKGLKPEVSSKLMPLAPA*SSVTLL Trigger: CAGGAGAGTCACCGAGCTTCAAGCTGGAGCCAATGG...CATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR GCA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTGGGTCTAGCAGCTCCTaGAGCCTGGGGCCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKLMRLILDLYSIQTIPGSSSS*SLGPGL Trigger: AAGCCCTGGCCCCAGGCTGCAGGAGCTGCTAGACCC...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAAACACAGCTTTTCTGCTaGATGTATTCTCTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVDLKLVSQDLALLWSQTQLFC*MYSLVP Trigger: AGGCACCAGAGAATACATGCAGCAGAAAAGCTGTGT...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTTAATGTCACAAATAACAGCTGTCACCTGTTaGCTCAGTTTCCCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWSQGPQEPKLSCLMSQITAVTC*LSFPSS Trigger: AGAACTTGGGAAACTGAGGCAACAGGTGACAGCTGT...TATTTGTGACATTAAGCAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR CCA 90 bp | AGACTTATACAGCATCCAAACCATACCTGGGTCAAAATAAAGGTTGATGCATCTAGTCCCTTTGGGGGCTaGGGTCTAGCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQHPNHTWVKIKVDASSPFGG*GLAAPA Trigger: TGCAGGAGCTGCTAGACCCCAGCCCCCAAAGGGACT...AGATGCATCAACCTTTATTTTGACCCAGGTATGGTTTGGATGCTGTATAAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTCTCTCCTTTACAGCCTaGGAGTCCCTTTGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSKIHQSGQRISALDKTVLSFTA*ESLWGL Trigger: CAGCCCCCAAAGGGACTCCCAGGCTGTAAAGGAGAG...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAACACAAGGCACACAAATaGAGTTTCTTGGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVDLKLVSQDLALLWSQHKAHK*SFLGCS Trigger: AGAACAGCCCAAGAAACTCCATTTGTGTGCCTTGTG...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | AGACTTATACAGCATCCAAACCATACCTGGGTCAAAATAAAGGTTGATGCATCTCCCGCCCTTGGTTTGTaGCCTGTTGCCTCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLIQHPNHTWVKIKVDASPALGL*PVASVS Trigger: GGAAACTGAGGCAACAGGTCACAAACCAAGGGCGGG...AGATGCATCAACCTTTATTTTGACCCAGGTATGGTTTGGATGCTGTATAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAATGTCACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATTGATGCAGCTTGAAGCTCGGTaGCTCTCCTGCTGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNVTNKGLKPEVSSKLMQLEAR*LSCCFQ Trigger: CTGGAAACAGCAGGAGAGTCACCGAGCTTCAAGCTG...CATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR TCA 90 bp | GCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTTCTCTCCACGTGGGTGCTTaGGACCTCCTGACTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AKYTKVGKEYQLWIRQFSLHVGA*DLLTGN Trigger: ATTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAG...AGAAAACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR GCA 90 bp | CTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTTAATGTCACAAATACCTATGTGTGTTCTGTaGAGTGACAGAAAATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWSQGPQEPKLSCLMSQIPMCVL*SDRKCG Trigger: CCCACATTTTCTGTCACTGCACAGAACACACATAGG...TATTTGTGACATTAAGCAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGTTGACCTTAAATTGGTGTCCCAGGACCTAGCCCTTCTTTGGTCTCAATCCGAGAGAAACTTTTaGCACATTCACTACAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVDLKLVSQDLALLWSQSERNF*HIHYSD Trigger: ATCGCTGTAGTGAATGTGGCAAAAGTTTCTCTCGGA...TTGAGACCAAAGAAGGGCTAGGTCCTGGGACACCAATTTAAGGTCAACAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTCCTGACTGGGAATGCTaGACTCTAGAGTCCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSKIHQSGQRISALDKTVPDWEC*TLESPS Trigger: ACTCGGGGACTCTAGAGTCCAGCATTCCCAGTCAGG...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| 3UTR CAA 72 bp | TGCAGCCAAGCTCAACTACACACTGAGTCAGTTAGCTaGAGCTACGTAAGACTTTGTCACAAAACAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSQAQLHTESVS*SYVRLCHKTNP Trigger: GGGGTTTGTTTTGTGACAAAGTCTTACGTAGCTCAAGCTAACTGACTCAGTGTGTAGTTGAGCTTGGCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAATGTCACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATTGATGATCCGGTTGGAACTGTaGGAGAAACTGTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLNVTNKGLKPEVSSKLMIRLEL*EKLSPH Trigger: GTGTGGAGACAGTTTCTCTCACAGTTCCAACCGGAT...CATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CCA 90 bp | GGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATTCTGCTCCCCGCCCTTaGTTTGTGACCTGTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GILKIDAINTRLIQHPNHSAPRP*FVTCCL Trigger: GAGGCAACAGGTCACAAACCAAGGGCGGGGAGCAGA...ATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTTAATGTCACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATTGATGGGTGACGAAGCAGGTTaGAGCTGTGAGCAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNVTNKGLKPEVSSKLMGDEAG*SCEQRS Trigger: AGATCTTTGCTCACAGCTCCAACCTGCTTCGTCACC...CATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACTACGCTCCACAAGAGTaGCTGCTTCTTCGCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGILKIDAINTRLIQHPNYAPQE*LLLRRS Trigger: AGAGCGGCGAAGAAGCAGTCACTCTTGTGGAGCGTA...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTACGCTCCACAAGAGTaGCTGCTTCTTCGCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILKIDAINTRLIQHPNHTYAPQE*LLLRRS Trigger: AGAGCGGCGAAGAAGCAGTCACTCTTGTGGAGCGTA...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTTCTGTGTGTTCTGTGCAGTaGCAGAAAATGTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKYTKVGKEYQLWIRQFSVCSVQ*QKMWVS Trigger: GGACACCCACATTTTCTGTCACTGCACAGAACACAC...AGAAAACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTCATCAAGTCTTCCCTaGTCAGGACTCCAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILKIDAINTRLIQHPNHTSSSLP*SGLQGT Trigger: GGTGCCCTGGAGTCCTGAGCAGGGAAGACTTGATGA...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | AGACTTATACAGCATCCAAACCATACCTGGGTCAAAATAAAGGTTGATGCATCTTTTTCCCACAGGCATTaGACTGGAAGGGCTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLIQHPNHTWVKIKVDASFSHRH*TGRAFP Trigger: GGGAAAAGCCCTTCCAGTGCAATGCCTGTGGGAAAA...AGATGCATCAACCTTTATTTTGACCCAGGTATGGTTTGGATGCTGTATAAGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTTCTTTTTCCCACAGGCATTaGACTGGAAGGGCTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKYTKVGKEYQLWIRQFSFSHRH*TGRAFP Trigger: GGGAAAAGCCCTTCCAGTGCAATGCCTGTGGGAAAA...AGAAAACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| 3UTR CAA 72 bp | GCCCAAACTCTCCTGCTTAATGTCACAAATAAGGGGTaGAAGCCAGAGGTATCCTCAAAATTGATGCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: AQTLLLNVTNKG*KPEVSSKLMRL Trigger: TAATCGCATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAGGAGAGTTTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCCTGTCATTCATGCCTTaGCCACACTCAGGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKIDAINTRLIQHPNHTLSFMP*PHSGKG Trigger: CCCTTTCCCTGAGTGTGGTCAAGGCATGAATGACAG...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTTCTGGTTCATGCCTTCCTTaGAGGTCTGGACACTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AKYTKVGKEYQLWIRQFSGSCLP*RSGHLN Trigger: ATTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACC...AGAAAACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR GCA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACGGTTTCTGGGGTTCATaGCTTCCTTGCAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGILKIDAINTRLIQHPNGFWGS*LPCRSG Trigger: TCCAGACCTGCAAGGAAGGCATGAACCCCAGAAACC...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTTTCCACTCCTGGAACTaGGTTTCTGGGGTTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKLMRLILDLYSIQTIPFHSWN*VSGVHA Trigger: GGCATGAACCCCAGAAACCCAGTTCCAGGAGTGGAA...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| 3UTR CAA 72 bp | GGTACTTTCAGGAGAAACAGACTCAACATTTCTTTCTaGGTTCTCAAACTTTTCCACTCCTGGAACTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTFRRNRLNISF*VLKLFHSWNWV Trigger: AACCCAGTTCCAGGAGTGGAAAAGTTTGAGAACCAAGAAAGAAATGTTGAGTCTGTTTCTCCTGAAAGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTATACAGCATCCAAACCATACCTGGGTCAAAATAAAGGTTGATGCATCTCTTGGGCTGTTCTTTTaGTTGCACCAGTCCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQHPNHTWVKIKVDASLGLFF*LHQSFT Trigger: TGTAAAGGACTGGTGCAAGCAAAAGAACAGCCCAAG...AGATGCATCAACCTTTATTTTGACCCAGGTATGGTTTGGATGCTGTATAAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTTCTCCTATGTGTGTTCTGTaGAGTGACAGAAAATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKYTKVGKEYQLWIRQFSPMCVL*SDRKCG Trigger: CCCACATTTTCTGTCACTGCACAGAACACACATAGG...AGAAAACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACATGACTTGTAAGACGTaGGCTCCGAGAGAAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGILKIDAINTRLIQHPNMTCKT*APREAF Trigger: GAAAGCTTCTCTCGGAGCTCACGTCTTACAAGTCAT...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTATCTGATGAAATCATGGAACCCTCCACTCATAATCATGTCTACAGAGACACAGCTTTTCTGCTaGATGTATTCTCTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLYLMKSWNPPLIIMSTETQLFC*MYSLVP Trigger: AGGCACCAGAGAATACATGCAGCAGAAAAGCTGTGT...CTCTGTAGACATGATTATGAGTGGAGGGTTCCATGATTTCATCAGATACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTATCTGATGAAATCATGGAACCCTCCACTCATAATCATGTCTACAGAGCACAAGGCACACAAATaGAGTTTCTTGGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLYLMKSWNPPLIIMSTEHKAHK*SFLGCS Trigger: AGAACAGCCCAAGAAACTCCATTTGTGTGCCTTGTG...CTCTGTAGACATGATTATGAGTGGAGGGTTCCATGATTTCATCAGATACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCGGTGACGAATCCGGTTaGAACTGTGAGAGAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILKIDAINTRLIQHPNHTGDESG*NCERNC Trigger: ACAGTTTCTCTCACAGTTCCAACCGGATTCGTCACC...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACGTGAGGTGGGTATTTTaGCTGAAGCATTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGILKIDAINTRLIQHPNVRWVF*LKHFPH Trigger: ATGTGGAAAATGCTTCAGTCAAAATACCCACCTCAC...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTTCCGAGAGAAACTTTTaGCACATTCACTACAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSKLMRLILDLYSIQTIPSERNF*HIHYSD Trigger: ATCGCTGTAGTGAATGTGGCAAAAGTTTCTCTCGGA...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| 3UTR CAA 72 bp | ACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATaGATGCGATTAATACTAGACTTATACAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TNKGLKPEVSSK*MRLILDLYSIQ Trigger: TTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 ENSMUST00000162207.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATATGGGAACAATCTaGAAGGAAAGGATAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGILKIDAINTRLIQHPNHMGTI*KERISY Trigger: GTAGCTTATCCTTTCCTTCCAGATTGTTCCCATATG...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| 3UTR CAA 72 bp | TCAATTAGCAGAGATCCAGTTCTGTATTGCAAACTATaGACTAAGATATGCTGGGTGTTATCCACTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SISRDPVLYCKL*TKICWVLSTKY Trigger: ATATTTAGTGGATAACACCCAGCATATCTTAGTCAATAGTTTGCAATACAGAACTGGATCTCTGCTAATTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS CCA 90 bp | TGGGAGGCCTCCGGGCTGGGCTCTGGCTCAGGCGGGGGTACCTCGTaGCTCCAGGCACAGTCCTCCTCCAGTTTCACTATGAGGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WEASGLGSGSGGGTS*LQAQSSSSFTMRSP Trigger: AGGGCTCCTCATAGTGAAACTGGAGGAGGACTGTGCCTGGAGCCACGAGGTACCCCCGCCTGAGCCAGAGCCCAGCCCGGAGGCCTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS CCA 90 bp | CCTGAAAGCGGAACCGTCGAAATCGCAGATGGGAGGCCTCCGGGCTaGGCTCTGGCTCAGGCGGGGGTACCTCGTGGCTCCAGGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PESGTVEIADGRPPG*ALAQAGVPRGSRHS Trigger: ACTGTGCCTGGAGCCACGAGGTACCCCCGCCTGAGCCAGAGCCCAGCCCGGAGGCCTCCCATCTGCGATTTCGACGGTTCCGCTTTCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS GCA 90 bp | CTCTCCTGCTGTTTCCAGTGGCAAAGGCTCCTCCAAAAGCACTTCTaGTCCCCGCCCTTGGTTTGTGACCTGTTGCCTCAGTTTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSCCFQWQRLLQKHF*SPPLVCDLLPQFPK Trigger: CTTGGGAAACTGAGGCAACAGGTCACAAACCAAGGGCGGGGAGCAGAAGTGCTTTTGGAGGAGCCTTTGCCACTGGAAACAGCAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCGTCCTTTGGTGTCTGTaGAGGTTGGAGTTGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQDLALLWSQGPQEPKLSVLWCL*RLELQE Trigger: CTCTTGCAACTCCAACCTCAACAGACACCAAAGGAC...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS GCA 90 bp | CGCCCTTGGTTTGTGACCTGTTGCCTCAGTTTCCCAAGTTCTTTCTaGATACGCTCCACAAGAGTGACTGCTTCTTCGCCGCTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPWFVTCCLSFPSSF*IRSTRVTASSPLSG Trigger: CCCAGAGAGCGGCGAAGAAGCAGTCACTCTTGTGGAGCGTATGCAGAAAGAACTTGGGAAACTGAGGCAACAGGTCACAAACCAAGGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGTCTTGGGCTGTTCTTTaGCTTGCACCAGTCCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPSPSLVSRASGAQTLLSWAVL*LAPVLY Trigger: GTAAAGGACTGGTGCAAGCAAAAGAACAGCCCAAGA...CAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGGGTGAGGTGGGTATTTaGACTGAAGCATTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGPSPSLVSRASGAQTLLGEVGI*TEAFST Trigger: TGTGGAAAATGCTTCAGTCAAAATACCCACCTCACC...CAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS GCA 90 bp | TCCTCCAAAAGCACTTCTGCTCCCCGCCCTTGGTTTGTGACCTGTTaGCTCAGTTTCCCAAGTTCTTTCTGCATACGCTCCACAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSKSTSAPRPWFVTC*LSFPSSFCIRSTRV Trigger: CACTCTTGTGGAGCGTATGCAGAAAGAACTTGGGAAACTGAGGCAACAGGTCACAAACCAAGGGCGGGGAGCAGAAGTGCTTTTGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS GCA 90 bp | GGTAAAACAGCTGTCACCTGTTGCCTCAGTTTCCCAAGTTCTTTCTaGATACGCTCCACAAGAGTGACTGCTTCTTCGCCGCTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKTAVTCCLSFPSSF*IRSTRVTASSPLSG Trigger: CCCAGAGAGCGGCGAAGAAGCAGTCACTCTTGTGGAGCGTATGCAGAAAGAACTTGGGAAACTGAGGCAACAGGTGACAGCTGTTTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGACCTAGCCCTTCTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCCTCAACATTTCTTTCTaGGTTCTCAAACTTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQDLALLWSQGPQEPKLSLNISF*VLKLFH Trigger: GTGGAAAAGTTTGAGAACCAAGAAAGAAATGTTGAG...GGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAGAAGGGCTAGGTCCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGTCTCAAGGGCCTCAGGAGCCCAAACTCTCCTGCTTAATGTCACAAATAAACAGCTGTCACCTGTaGCCTCAGTTTCCCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWSQGPQEPKLSCLMSQINSCHL*PQFPKF Trigger: GAACTTGGGAAACTGAGGCAACAGGTGACAGCTGTT...TATTTGTGACATTAAGCAGGAGAGTTTGGGCTCCTGAGGCCCTTGAGACCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161630.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTCCATTGGCTCCAGCTaGAAGCTCGGTGACTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSKIHQSGQRISALDKTVSIGSS*KLGDSP Trigger: AGGAGAGTCACCGAGCTTCAAGCTGGAGCCAATGGA...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CAA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTGCTCCACGTGGGTGCTaGAGACCTCCTGACTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSKLMRLILDLYSIQTIPAPRGC*RPPDWE Trigger: TTCCCAGTCAGGAGGTCTCAAGCACCCACGTGGAGC...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTGGGTTCATGCCTTCCTaGCAGGTCTGGACACTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSKIHQSGQRISALDKTVGFMPS*QVWTLE Trigger: TTCAAGTGTCCAGACCTGCAAGGAAGGCATGAACCC...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACTTCTGCTCCCCGCCCTaGGTTTGTGACCTGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGILKIDAINTRLIQHPNFCSPP*VCDLLP Trigger: AGGCAACAGGTCACAAACCAAGGGCGGGGAGCAGAA...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTCCTGAGAGATATACATaGCCATGTCCTCCAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSKIHQSGQRISALDKTVPERYT*PCPPGS Trigger: AGAGCCTGGAGGACATGGCAATGTATATCTCTCAGG...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS-3UTR CAA 90 bp | CTGCTTAATGTCACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATTGATGGTCCTTTGGTGTCTGTaGAGGTTGGAGTTGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLNVTNKGLKPEVSSKLMVLWCL*RLELQE Trigger: CTCTTGCAACTCCAACCTCAACAGACACCAAAGGAC...CATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTTAATGTCACAAATAAGGGGTTGAAGCCAGAGGTATCCTCAAAATTGATGACTGTCATTCATGCCTaGACCACACTCAGGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLNVTNKGLKPEVSSKLMTVIHA*TTLRER Trigger: CCTTTCCCTGAGTGTGGTCAAGGCATGAATGACAGT...CATCAATTTTGAGGATACCTCTGGCTTCAACCCCTTATTTGTGACATTAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTCACAAATGGAGTTTCTaGGGCTGTTCTTTTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSKIHQSGQRISALDKTVHKWSF*GCSFAC Trigger: GCAAGCAAAAGAACAGCCCAAGAAACTCCATTTGTG...AACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAATACACCAAAGTGGGCAAAGAATATCAGCTCTGGATAAGACAGTTTTCTCTCCGAGAGAAACTTTaGCCACATTCACTACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: AKYTKVGKEYQLWIRQFSLREKL*PHSLQR Trigger: TCGCTGTAGTGAATGTGGCAAAAGTTTCTCTCGGAG...AGAAAACTGTCTTATCCAGAGCTGATATTCTTTGCCCACTTTGGTGTATTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCACTGTCATTCATGCCTaGACCACACTCAGGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILKIDAINTRLIQHPNHTTVIHA*TTLRER Trigger: CCTTTCCCTGAGTGTGGTCAAGGCATGAATGACAGT...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | GGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATGGGCTGTTCTTTTGCTaGCACCAGTCCTTTACAACT | + |
|
Preference number: 5 (lower is better) Translates to: GILKIDAINTRLIQHPNHGLFFC*HQSFTT Trigger: AGTTGTAAAGGACTGGTGCAAGCAAAAGAACAGCCC...ATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCGGGCTGTTCTTTTGCTaGCACCAGTCCTTTACAACT | + |
|
Preference number: 5 (lower is better) Translates to: ILKIDAINTRLIQHPNHTGLFFC*HQSFTT Trigger: AGTTGTAAAGGACTGGTGCAAGCAAAAGAACAGCCC...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACTCTTGGGCTGTTCTTTaGCTTGCACCAGTCCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RGILKIDAINTRLIQHPNSWAVL*LAPVLY Trigger: GTAAAGGACTGGTGCAAGCAAAAGAACAGCCCAAGA...GTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | GGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATCTGTTGAGGTTGGAGTaGCAAGAGAAGCTTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GILKIDAINTRLIQHPNHLLRLE*QEKLFP Trigger: TGGGAAAAGCTTCTCTTGCAACTCCAACCTCAACAG...ATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTTGGTGTCTGTTGAGGTaGGAGTTGCAAGAGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSKLMRLILDLYSIQTIPWCLLR*ELQEKL Trigger: AAGCTTCTCTTGCAACTCCAACCTCAACAGACACCA...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | GGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATTGGTGTCTGTTGAGGTaGGAGTTGCAAGAGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GILKIDAINTRLIQHPNHWCLLR*ELQEKL Trigger: AAGCTTCTCTTGCAACTCCAACCTCAACAGACACCA...ATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTCTCCGAGAGAAACTTTaGCCACATTCACTACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSKLMRLILDLYSIQTIPLREKL*PHSLQR Trigger: TCGCTGTAGTGAATGTGGCAAAAGTTTCTCTCGGAG...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCTCACAAATGGAGTTTCTaGGGCTGTTCTTTTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKLMRLILDLYSIQTIPHKWSF*GCSFAC Trigger: GCAAGCAAAAGAACAGCCCAAGAAACTCCATTTGTG...AGGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCGGTGAGGTGGGTATTTaGACTGAAGCATTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ILKIDAINTRLIQHPNHTGEVGI*TEAFST Trigger: TGTGGAAAATGCTTCAGTCAAAATACCCACCTCACC...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | AGACTTATACAGCATCCAAACCATACCTGGGTCAAAATAAAGGTTGATGCATCTTTATTAGAAAAGTTCTaGCCACACAAGGCACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLIQHPNHTWVKIKVDASLLEKF*PHKAHK Trigger: TTTGTGTGCCTTGTGTGGCAAGAACTTTTCTAATAA...AGATGCATCAACCTTTATTTTGACCCAGGTATGGTTTGGATGCTGTATAAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATACCCTCAACATTTCTTTCTaGGTTCTCAAACTTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILKIDAINTRLIQHPNHTLNISF*VLKLFH Trigger: GTGGAAAAGTTTGAGAACCAAGAAAGAAATGTTGAG...GGTATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS-3UTR CAA 90 bp | GGTATCCTCAAAATTGATGCGATTAATACTAGACTTATACAGCATCCAAACCATTTATTAGAAAAGTTCTaGCCACACAAGGCACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: GILKIDAINTRLIQHPNHLLEKF*PHKAHK Trigger: TTTGTGTGCCTTGTGTGGCAAGAACTTTTCTAATAA...ATGGTTTGGATGCTGTATAAGTCTAGTATTAATCGCATCAATTTTGAGGATACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000162207.2 |
||
| CDS CCA 72 bp | TCCGGGCTGGGCTCTGGCTCAGGCGGGGGTACCTCGTaGCTCCAGGCACAGTCCTCCTCCAGTTTCACTATG | + |
|
Preference number: 6 (lower is better) Translates to: SGLGSGSGGGTS*LQAQSSSSFTM Trigger: CATAGTGAAACTGGAGGAGGACTGTGCCTGGAGCCACGAGGTACCCCCGCCTGAGCCAGAGCCCAGCCCGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS GCA 72 bp | CCCAAGTTCTTTCTGCATACGCTCCACAAGAGTGACTaGTTCTTCGCCGCTCTCTGGGCGCAGCTCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PKFFLHTLHKSD*FFAALWAQLLH Trigger: GTGCAGGAGCTGCGCCCAGAGAGCGGCGAAGAAGCAGTCACTCTTGTGGAGCGTATGCAGAAAGAACTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS TCA 72 bp | GTTTCCCAAGTTCTTTCTGCATACGCTCCACAAGAGTaGCTGCTTCTTCGCCGCTCTCTGGGCGCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSQVLSAYAPQE*LLLRRSLGAAP Trigger: AGGAGCTGCGCCCAGAGAGCGGCGAAGAAGCAGTCACTCTTGTGGAGCGTATGCAGAAAGAACTTGGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023176.5 ENSMUST00000161630.8 |
||
| CDS GCA 72 bp | AGCACTTCTGCTCCCCGCCCTTGGTTTGTGACCTGTTaGCTCAGTTTCCCAAGTTCTTTCTGCATACGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: STSAPRPWFVTC*LSFPSSFCIRS Trigger: GGAGCGTATGCAGAAAGAACTTGGGAAACTGAGGCAACAGGTCACAAACCAAGGGCGGGGAGCAGAAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||
| CDS CAA 90 bp | CTCCTCCAAAAGCACTTCTGCTCCCCGCCCTTGGTTTGTGACCTGTaGCCTCAGTTTCCCAAGTTCTTTCTGCATACGCTCCACAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLQKHFCSPPLVCDL*PQFPKFFLHTLHKS Trigger: ACTCTTGTGGAGCGTATGCAGAAAGAACTTGGGAAACTGAGGCAACAGGTCACAAACCAAGGGCGGGGAGCAGAAGTGCTTTTGGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023176.5 |
||