Pregenerated sensors for ZFP260 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049421Ensembl transcript IDs: ENSMUST00000050735.12, ENSMUST00000108200.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACCTTGAGTTGGCCTGGTGATGTCTGGAACTGCAACACTGGGCAGATGGGTAAGGAAGACCATTCTGATTaGAATCACTGGACTCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: TLSWPGDVWNCNTGQMGKEDHSD*NHWTPK Trigger: TTTAGGAGTCCAGTGATTCCAATCAGAATGGTCTTC...CTTACCCATCTGCCCAGTGTTGCAGTTCCAGACATCACCAGGCCAACTCAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTATCAACAAAGACCTTGAGTTGGCCTGGTGATGTCTGGAACTGCAACACTGGGCAGATGGGTAAGTaGATCAGAAGAAACTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ILSTKTLSWPGDVWNCNTGQMGK*IRRNWR Trigger: CCTCCAGTTTCTTCTGATTCACTTACCCATCTGCCC...AGTGTTGCAGTTCCAGACATCACCAGGCCAACTCAAGGTCTTTGTTGATAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGAAACTGGAGGCCAGCTTGGGCTACATAGGGAGTTTAAGGTCACCCTGGAAGACCATTCTGATTaGAATCACTGGACTCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SEETGGQLGLHREFKVTLEDHSD*NHWTPK Trigger: TTTAGGAGTCCAGTGATTCCAATCAGAATGGTCTTC...CAGGGTGACCTTAAACTCCCTATGTAGCCCAAGCTGGCCTCCAGTTTCTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGAAACTACCACGATTTTCCCACTaGCCTGGGATACTGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: AEESRIYNLFPTSGSQKLPRFSH*PGILPQ Trigger: TTGTGGCAGTATCCCAGGTCAGTGGGAAAATCGTGG...TAGTTTCTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGAAACTATTTCTTGTGGGGGTCTaGGAAGTATATAATGCTATG | + |
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Preference number: 2 (lower is better) Translates to: AEESRIYNLFPTSGSQKLFLVGV*EVYNAM Trigger: CATAGCATTATATACTTCCCAGACCCCCACAAGAAA...TAGTTTCTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTAGCTGCTAGCATATTCTACAGCATGACCATTACATTTTCTTCATCTACTCTCCAGAAAAATAGCTaGGGAATCCAGAATCTACAA | + |
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Preference number: 2 (lower is better) Translates to: CLAASIFYSMTITFSSSTLQKNS*GIQNLQ Trigger: TTGTAGATTCTGGATTCCTCAGCTATTTTTCTGGAG...AGTAGATGAAGAAAATGTAATGGTCATGCTGTAGAATATGCTAGCAGCTAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGAAACTACAAAGCTTTGCTTTGTaGAAAGACACTGTAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: AEESRIYNLFPTSGSQKLQSFAL*KDTVIS Trigger: AGAAATTACAGTGTCTTTGCACAAAGCAAAGCTTTG...TAGTTTCTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTAGCTGCTAGCATATTCTACAGCATGACCATTACATTTTCTTCATCTACTTTTCTTGTGGGGGTCTaGGAAGTATATAATGCTATG | + |
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Preference number: 2 (lower is better) Translates to: CLAASIFYSMTITFSSSTFLVGV*EVYNAM Trigger: CATAGCATTATATACTTCCCAGACCCCCACAAGAAA...AGTAGATGAAGAAAATGTAATGGTCATGCTGTAGAATATGCTAGCAGCTAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGTCCAATCAATGGGCAGAAACTACCCAGCAACATTTATTTTACTTAACAAGCATACCAGCTCTTTaGATAAGTATAAATGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SESNQWAETTQQHLFYLTSIPAL*ISINAP Trigger: TGGAGCATTTATACTTATTCAAAGAGCTGGTATGCT...TGTTAAGTAAAATAAATGTTGCTGGGTAGTTTCTGCCCATTGATTGGACTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATAGCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGCAAAGCTTTGCTTTGTaGAAAGACACTGTAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: KIAEESRIYNLFPTSGSQQSFAL*KDTVIS Trigger: AGAAATTACAGTGTCTTTGCACAAAGCAAAGCTTTG...CTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGCTATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATAGCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGTCTTATACAAAGCTTTaGTTTGTGCAAAGACACTGT | + |
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Preference number: 2 (lower is better) Translates to: KIAEESRIYNLFPTSGSQSYTKL*FVQRHC Trigger: ACAGTGTCTTTGCACAAAGCAAAGCTTTGTATAAGA...CTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGCTATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR CCA 72 bp | GGCCTGGTGATGTCTGGAACTGCAACACTGGGCAGATaGGTAAGTGAATCAGAAGAAACTGGAGGCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: GLVMSGTATLGR*VSESEETGGQL Trigger: AAGCTGGCCTCCAGTTTCTTCTGATTCACTTACCCATCTGCCCAGTGTTGCAGTTCCAGACATCACCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR GCA 72 bp | TCAGTCATCCACGATTTTCCCACTGACCTGGGATACTaGCACAATCAATTACCAATGCTCTGTGAATTCATT | + |
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Preference number: 3 (lower is better) Translates to: SVIHDFPTDLGY*HNQLPMLCEFI Trigger: AATGAATTCACAGAGCATTGGTAATTGATTGTGGCAGTATCCCAGGTCAGTGGGAAAATCGTGGATGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGAAACTATTATCAACAAAGACCTaGAGTTGGCCTGGTGATGTC | + |
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Preference number: 3 (lower is better) Translates to: AEESRIYNLFPTSGSQKLLSTKT*SWPGDV Trigger: GACATCACCAGGCCAACTCAAGGTCTTTGTTGATAA...TAGTTTCTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTTAGCTGCTAGCATATTCTACAGCATGACCATTACATTTTCTTCATCTACTTCCAGAATCTACAATTaGTTTCCTACTTCAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: CLAASIFYSMTITFSSSTSRIYN*FPTSGS Trigger: AGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGA...AGTAGATGAAGAAAATGTAATGGTCATGCTGTAGAATATGCTAGCAGCTAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR CCA 72 bp | TGCTACTATAATTTACGCTGTGATGAAGAGATCAACTaGTACATGATTCCCTATATAAGCATACCAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: CYYNLRCDEEIN*YMIPYISIPAL Trigger: AAGAGCTGGTATGCTTATATAGGGAATCATGTACCAGTTGATCTCTTCATCACAGCGTAAATTATAGTAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR CCA 72 bp | AACTCCACTGTTACTATAATAGCAACAACTAGGTTTTaGGAACTGAACACATATATATACTCCCAACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: NSTVTIIATTRF*ELNTYIYSQLW Trigger: CCAGAGTTGGGAGTATATATATGTGTTCAGTTCCCAAAACCTAGTTGTTGCTATTATAGTAACAGTGGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR GCA 72 bp | CTATATAAGCATACCAGCTCTTTGAATAAGTATAAATaGTCCAGAAAAATAGCTGAGGAATCCAGAATCTAC | + |
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Preference number: 3 (lower is better) Translates to: LYKHTSSLNKYK*SRKIAEESRIY Trigger: GTAGATTCTGGATTCCTCAGCTATTTTTCTGGAGCATTTATACTTATTCAAAGAGCTGGTATGCTTATATAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR TCA 90 bp | TCAGAAGAAACTGGAGGCCAGCTTGGGCTACATAGGGAGTTTAAGGTCACCCTGTTCCCTGTGTTTCTCTaGTTTCTAACGGTGGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SEETGGQLGLHREFKVTLFPVFL*FLTVVV Trigger: GACAACCACCGTTAGAAATCAGAGAAACACAGGGAA...CAGGGTGACCTTAAACTCCCTATGTAGCCCAAGCTGGCCTCCAGTTTCTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR TCA 90 bp | ATCTTATCAACAAAGACCTTGAGTTGGCCTGGTGATGTCTGGAACTGCAACACTTTCCCTGTGTTTCTCTaGTTTCTAACGGTGGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: ILSTKTLSWPGDVWNCNTFPVFL*FLTVVV Trigger: GACAACCACCGTTAGAAATCAGAGAAACACAGGGAA...AGTGTTGCAGTTCCAGACATCACCAGGCCAACTCAAGGTCTTTGTTGATAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR CCA 90 bp | TCTGAGTCCAATCAATGGGCAGAAACTACCCAGCAACATTTATTTTACTTAACAAGGAAGTTTCCTCTCTaGCTGAAGGCCTTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SESNQWAETTQQHLFYLTRKFPL*LKAFPH Trigger: ATGTGGGAAGGCCTTCAGCCAGAGAGGAAACTTCCT...TGTTAAGTAAAATAAATGTTGCTGGGTAGTTTCTGCCCATTGATTGGACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTTGAATAAGTATAAATGCTCCAGAAAAATAGCTGAGGAATCCAGAATCAGGAAGTTTCCTCTCTaGCTGAAGGCCTTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SSLNKYKCSRKIAEESRIRKFPL*LKAFPH Trigger: ATGTGGGAAGGCCTTCAGCCAGAGAGGAAACTTCCT...GATTCTGGATTCCTCAGCTATTTTTCTGGAGCATTTATACTTATTCAAAGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGAAACTAGTGTTCTTTGAGATATaGCTTGCCATTAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: AEESRIYNLFPTSGSQKLVFFEI*LAIKGF Trigger: AAAGCCTTTAATGGCAAGTCATATCTCAAAGAACAC...TAGTTTCTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGAAACTAATGAGGTATTGTTTCTaGCTGAAAATCGTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: AEESRIYNLFPTSGSQKLMRYCF*LKIVPH Trigger: ATGTGGAACGATTTTCAGGCAGAAACAATACCTCAT...TAGTTTCTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTTTGAATAAGTATAAATGCTCCAGAAAAATAGCTGAGGAATCCAGAATCGGTATTGTTTCTGCCTaGAAATCGTTCCACATTCGT | + |
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Preference number: 4 (lower is better) Translates to: SSLNKYKCSRKIAEESRIGIVSA*KSFHIR Trigger: ACGAATGTGGAACGATTTTCAGGCAGAAACAATACC...GATTCTGGATTCCTCAGCTATTTTTCTGGAGCATTTATACTTATTCAAAGAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR TCA 90 bp | TGCTTAGCTGCTAGCATATTCTACAGCATGACCATTACATTTTCTTCATCTACTGTGTTCTTTGAGATATaGCTTGCCATTAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CLAASIFYSMTITFSSSTVFFEI*LAIKGF Trigger: AAAGCCTTTAATGGCAAGTCATATCTCAAAGAACAC...AGTAGATGAAGAAAATGTAATGGTCATGCTGTAGAATATGCTAGCAGCTAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGTCCAATCAATGGGCAGAAACTACCCAGCAACATTTATTTTACTTAACAATGAGGTATTGTTTCTaGCTGAAAATCGTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SESNQWAETTQQHLFYLTMRYCF*LKIVPH Trigger: ATGTGGAACGATTTTCAGGCAGAAACAATACCTCAT...TGTTAAGTAAAATAAATGTTGCTGGGTAGTTTCTGCCCATTGATTGGACTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR CAA 72 bp | AGAAGAGTTTCCCATAAACGATGCTTAGTACCAGAGTaGGTAAGTTGGTTTTATTCAAATTTACGCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RRVSHKRCLVPE*VSWFYSNLRRN Trigger: ATTCCTGCGTAAATTTGAATAAAACCAACTTACCAACTCTGGTACTAAGCATCGTTTATGGGAAACTCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR CAA 72 bp | TACTACAATGTAGAGCCAAGTATCCATCTGTCACATTaGTTTGGAACTGCTCTATTGGAAAGTAGATATGTA | + |
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Preference number: 4 (lower is better) Translates to: YYNVEPSIHLSH*FGTALLESRYV Trigger: TACATATCTACTTTCCAATAGAGCAGTTCCAAACAAATGTGACAGATGGATACTTGGCTCTACATTGTAGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| 3UTR CAA 72 bp | AGTATCCATCTGTCACATTTGTTTGGAACTGCTCTATaGGAAAGTAGATATGTAACTATGAAGACTAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SIHLSHLFGTAL*ESRYVTMKTRK Trigger: CTTTCTAGTCTTCATAGTTACATATCTACTTTCCAATAGAGCAGTTCCAAACAAATGTGACAGATGGATACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR CAA 90 bp | ACCTTGAGTTGGCCTGGTGATGTCTGGAACTGCAACACTGGGCAGATGGGTAAGATGTTTGATGAGGTATaGTTTCTGCCTGAAAATCGT | + |
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Preference number: 5 (lower is better) Translates to: TLSWPGDVWNCNTGQMGKMFDEV*FLPENR Trigger: ACGATTTTCAGGCAGAAACAATACCTCATCAAACAT...CTTACCCATCTGCCCAGTGTTGCAGTTCCAGACATCACCAGGCCAACTCAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR CAA 90 bp | ATCTTATCAACAAAGACCTTGAGTTGGCCTGGTGATGTCTGGAACTGCAACACTTGTGTAAAGCAAGAGTaGAGAACTGAGAAAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ILSTKTLSWPGDVWNCNTCVKQE*RTEKRP Trigger: AGGCCTTTTCTCAGTTCTCAACTCTTGCTTTACACA...AGTGTTGCAGTTCCAGACATCACCAGGCCAACTCAAGGTCTTTGTTGATAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR CAA 90 bp | AAAATAGCTGAGGAATCCAGAATCTACAATTTGTTTCCTACTTCAGGGTCTCAGTCTCTCTTCGGTATGTaGTTTCTGATGAGAAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KIAEESRIYNLFPTSGSQSLFGM*FLMRKE Trigger: TTCCTTTCTCATCAGAAACAACATACCGAAGAGAGA...CTGAGACCCTGAAGTAGGAAACAAATTGTAGATTCTGGATTCCTCAGCTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR CAA 90 bp | TGCTTAGCTGCTAGCATATTCTACAGCATGACCATTACATTTTCTTCATCTACTTCTCTCTTCGGTATGTaGTTTCTGATGAGAAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: CLAASIFYSMTITFSSSTSLFGM*FLMRKE Trigger: TTCCTTTCTCATCAGAAACAACATACCGAAGAGAGA...AGTAGATGAAGAAAATGTAATGGTCATGCTGTAGAATATGCTAGCAGCTAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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| CDS-3UTR CAA 90 bp | TGGACTCCTAAAATTAGAATACTAATAATGTTTCTTGTGGGGGTCTGGGAAGTAATGTTTGATGAGGTATaGTTTCTGCCTGAAAATCGT | + |
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Preference number: 5 (lower is better) Translates to: WTPKIRILIMFLVGVWEVMFDEV*FLPENR Trigger: ACGATTTTCAGGCAGAAACAATACCTCATCAAACAT...TACTTCCCAGACCCCCACAAGAAACATTATTAGTATTCTAATTTTAGGAGTCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050735.12 ENSMUST00000108200.2 |
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