Pregenerated sensors for ZFP248 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030145Ensembl transcript IDs: ENSMUST00000069292.14, ENSMUST00000161519.8
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATACAGCAGAGTGTTAGGAATGACAAGTGTTGTTTATTTCCTTTGCTCTCAGTATCCTCACATCCTTTCTaGGTTCCAATAAATCATAAA | + |
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Preference number: 2 (lower is better) Translates to: IQQSVRNDKCCLFPLLSVSSHPF*VPINHK Trigger: TTTATGATTTATTGGAACCCAGAAAGGATGTGAGGA...TACTGAGAGCAAAGGAAATAAACAACACTTGTCATTCCTAACACTCTGCTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| 3UTR GCA 72 bp | TCTATAAACACCGGCTGTCTTTACATGTATGGTCAATaGTGTAGACGCTCATTTTTAAGTTTCATACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SINTGCLYMYGQ*CRRSFLSFILS Trigger: GGAAAGTATGAAACTTAAAAATGAGCGTCTACAGCATTGACCATACATGTAAAGACAGCCGGTGTTTATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR TCA 90 bp | CTCTCAGCATGGAGACCGATGGTACACAGCCAAGACAGCAGTGAGATACAGCAGTTCTCTGGTGTTTGGTaGGCGCCGATTTCTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LSAWRPMVHSQDSSEIQQFSGVW*APISHR Trigger: TCTGTGAGAAATCGGCGCTCACCAAACACCAGAGAA...CTGCTGTATCTCACTGCTGTCTTGGCTGTGTACCATCGGTCTCCATGCTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | CTCTCAGCATGGAGACCGATGGTACACAGCCAAGACAGCAGTGAGATACAGCAGATGGTTGGTAAGGTGTaGCTTCTGGCAGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSAWRPMVHSQDSSEIQQMVGKV*LLAEGF Trigger: AAAGCCTTCTGCCAGAAGCCACACCTTACCAACCAT...CTGCTGTATCTCACTGCTGTCTTGGCTGTGTACCATCGGTCTCCATGCTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | CTCTCAGCATGGAGACCGATGGTACACAGCCAAGACAGCAGTGAGATACAGCAGTTTCCATTTCCTTTCTaGGTGGCACTGGAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LSAWRPMVHSQDSSEIQQFPFPF*VALESI Trigger: AATGGATTCCAGTGCCACCCAGAAAGGAAATGGAAA...CTGCTGTATCTCACTGCTGTCTTGGCTGTGTACCATCGGTCTCCATGCTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR GCA 90 bp | ATGGTACACAGCCAAGACAGCAGTGAGATACAGCAGAGTGTTAGGAATGACAAGTACGCTCGTAAGGACTaGTTCCTGAGAGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVHSQDSSEIQQSVRNDKYARKD*FLRELC Trigger: ACACAGCTCTCTCAGGAAGCAGTCCTTACGAGCGTA...CTTGTCATTCCTAACACTCTGCTGTATCTCACTGCTGTCTTGGCTGTGTACCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR TCA 90 bp | GCAGGCTCTAAGCTCATTTTTAAAACTACAATGGACTTGACAGGCATGCGAAAGGTAAGGACTGCTTCCTaGGAGAGCTGTGTGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: AGSKLIFKTTMDLTGMRKVRTAS*ESCVMS Trigger: GGACATCACACAGCTCTCTCAGGAAGCAGTCCTTAC...CTTTCGCATGCCTGTCAAGTCCATTGTAGTTTTAAAAATGAGCTTAGAGCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR TCA 90 bp | CGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTGTAAGGACTGCTTCCTaGGAGAGCTGTGTGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RWYFLVLCGILWQALSSFVRTAS*ESCVMS Trigger: GGACATCACACAGCTCTCTCAGGAAGCAGTCCTTAC...AAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | ATGGTACACAGCCAAGACAGCAGTGAGATACAGCAGAGTGTTAGGAATGACAAGCTGGAATCCATTTTCTaGTATCCAGGGATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MVHSQDSSEIQQSVRNDKLESIF*YPGIFS Trigger: GGAGAAGATCCCTGGATACCAGAAAATGGATTCCAG...CTTGTCATTCCTAACACTCTGCTGTATCTCACTGCTGTCTTGGCTGTGTACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR GCA 90 bp | CGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTACGCTCGTAAGGACTaGTTCCTGAGAGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RWYFLVLCGILWQALSSFYARKD*FLRELC Trigger: ACACAGCTCTCTCAGGAAGCAGTCCTTACGAGCGTA...AAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | ATGGTACACAGCCAAGACAGCAGTGAGATACAGCAGAGTGTTAGGAATGACAAGAGTCAATGTCTGGACTaGGAGTTTCTCTTGTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MVHSQDSSEIQQSVRNDKSQCLD*EFLLCY Trigger: GTAACACAAGAGAAACTCCCAGTCCAGACATTGACT...CTTGTCATTCCTAACACTCTGCTGTATCTCACTGCTGTCTTGGCTGTGTACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | AACACGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCGCTTTCACCCTCGTGTaGATTCTCAGATGCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTMVFSSTLWYSLAGSKLAFTLV*ILRCLV Trigger: TACCAAGCATCTGAGAATCCACACGAGGGTGAAAGC...GAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR GCA 90 bp | AACACGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCCTTGATTTTCCTGGTTaGTCTCTAATAGGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTMVFSSTLWYSLAGSKLLDFPG*SLIGRP Trigger: TGGACGACCTATTAGAGAGCAACCAGGAAAATCAAG...GAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | AACACGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCCATTTCCTTTCTGGGTaGCACTGGAATCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTMVFSSTLWYSLAGSKLHFLSG*HWNPFS Trigger: AGAAAATGGATTCCAGTGCCACCCAGAAAGGAAATG...GAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | GCAGGCTCTAAGCTCATTTTTAAAACTACAATGGACTTGACAGGCATGCGAAAGTACAGAGTCAATGTCTaGACTGGGAGTTTCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSKLIFKTTMDLTGMRKYRVNV*TGSFSC Trigger: ACAAGAGAAACTCCCAGTCCAGACATTGACTCTGTA...CTTTCGCATGCCTGTCAAGTCCATTGTAGTTTTAAAAATGAGCTTAGAGCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCTCTAAGCTCATTTTTAAAACTACAATGGACTTGACAGGCATGCGAAAGATGTTTGAAGAGAGCTaGCTTTCCCCAAGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSKLIFKTTMDLTGMRKMFEES*LSPSSV Trigger: AACAGAACTTGGGGAAAGCCAGCTCTCTTCAAACAT...CTTTCGCATGCCTGTCAAGTCCATTGTAGTTTTAAAAATGAGCTTAGAGCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR TCA 90 bp | AAGGGCTCATCTTCCTCACATCCTTTCTGGGTTCCAATAAATCATAAATCCAGGCAAAAATGTCCATCTTaGTTTTCCTGGTTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGSSSSHPFWVPINHKSRQKCPS*FSWLLS Trigger: AGAGAGCAACCAGGAAAATCAAGATGGACATTTTTG...CCTGGATTTATGATTTATTGGAACCCAGAAAGGATGTGAGGAAGATGAGCCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR TCA 90 bp | AACACGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCCAAATACTGCACTCATaGAGTTCTGTATGCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: NTMVFSSTLWYSLAGSKLQILHS*SSVCKR Trigger: ACGTTTGCATACAGAACTTCATGAGTGCAGTATTTG...GAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR TCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTATTCTCTGGTGTTTGGTaGGCGCCGATTTCTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLFSGVW*APISHR Trigger: TCTGTGAGAAATCGGCGCTCACCAAACACCAGAGAA...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR GCA 90 bp | ATACAGCAGAGTGTTAGGAATGACAAGTGTTGTTTATTTCCTTTGCTCTCAGTAGTGTGGATTCTCAGATaGTTGGTAAGTACCGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQQSVRNDKCCLFPLLSVVWILR*LVSTDL Trigger: GAGGTCGGTACTTACCAAGCATCTGAGAATCCACAC...TACTGAGAGCAAAGGAAATAAACAACACTTGTCATTCCTAACACTCTGCTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | AACACGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCCTTGAAGATTACATCTaGCTTAGTAACACAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTMVFSSTLWYSLAGSKLLEDYI*LSNTMP Trigger: GGGCATTGTGTTACTAAGCCAGATGTAATCTTCAAG...GAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | ATGGTACACAGCCAAGACAGCAGTGAGATACAGCAGAGTGTTAGGAATGACAAGCCTACTGTCAGGGAGTaGTTTCTTATGTATATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MVHSQDSSEIQQSVRNDKPTVRE*FLMYIK Trigger: TTTAATATACATAAGAAACCACTCCCTGACAGTAGG...CTTGTCATTCCTAACACTCTGCTGTATCTCACTGCTGTCTTGGCTGTGTACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | ATACAGCAGAGTGTTAGGAATGACAAGTGTTGTTTATTTCCTTTGCTCTCAGTAGCTTTCACCCTCGTGTaGATTCTCAGATGCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IQQSVRNDKCCLFPLLSVAFTLV*ILRCLV Trigger: TACCAAGCATCTGAGAATCCACACGAGGGTGAAAGC...TACTGAGAGCAAAGGAAATAAACAACACTTGTCATTCCTAACACTCTGCTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR TCA 90 bp | CGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTGAGCAGAAAACTTCTTaGAGATACAGAGTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RWYFLVLCGILWQALSSFEQKTS*RYRVNV Trigger: GACATTGACTCTGTATCTTCAAGAAGTTTTCTGCTC...AAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTAATGGTTGGTAAGGTGTaGCTTCTGGCAGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLMVGKV*LLAEGF Trigger: AAAGCCTTCTGCCAGAAGCCACACCTTACCAACCAT...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR TCA 90 bp | CGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTATGAGTCACATACTTTaGGCAGAAAACTTCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RWYFLVLCGILWQALSSFMSHIL*AENFLK Trigger: CTTCAAGAAGTTTTCTGCTCAAAGTATGTGACTCAT...AAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR TCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTACCCATCTGTATTATCTaGTGTTTGAAGAGAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLPICII*CLKRAG Trigger: GCCAGCTCTCTTCAAACATCAGATAATACAGATGGG...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | ATACAGCAGAGTGTTAGGAATGACAAGTGTTGTTTATTTCCTTTGCTCTCAGTAGTTGGTGAACATGAGTaGCCAAAAATGTCCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: IQQSVRNDKCCLFPLLSVVGEHE*PKMSIL Trigger: CAAGATGGACATTTTTGGCCACTCATGTTCACCAAC...TACTGAGAGCAAAGGAAATAAACAACACTTGTCATTCCTAACACTCTGCTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR GCA 90 bp | ATACAGCAGAGTGTTAGGAATGACAAGTGTTGTTTATTTCCTTTGCTCTCAGTACAGGGATCTTCTCCTTaGTCTATCTTGAAGATTACA | + |
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Preference number: 4 (lower is better) Translates to: IQQSVRNDKCCLFPLLSVQGSSP*SILKIT Trigger: TGTAATCTTCAAGATAGAGCAAGGAGAAGATCCCTG...TACTGAGAGCAAAGGAAATAAACAACACTTGTCATTCCTAACACTCTGCTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTAAGTCAATGTCTGGACTaGGAGTTTCTCTTGTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLSQCLD*EFLLCY Trigger: GTAACACAAGAGAAACTCCCAGTCCAGACATTGACT...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTATACAGAGTCAATGTCTaGACTGGGAGTTTCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLYRVNV*TGSFSC Trigger: ACAAGAGAAACTCCCAGTCCAGACATTGACTCTGTA...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTAATGTTTGAAGAGAGCTaGCTTTCCCCAAGTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLMFEES*LSPSSV Trigger: AACAGAACTTGGGGAAAGCCAGCTCTCTTCAAACAT...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR TCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTAGAGCAGAAAACTTCTTaGAGATACAGAGTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLEQKTS*RYRVNV Trigger: GACATTGACTCTGTATCTTCAAGAAGTTTTCTGCTC...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CCA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTACCTACTGTCAGGGAGTaGTTTCTTATGTATATTAAA | + |
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Preference number: 4 (lower is better) Translates to: FLVLCGILWQALSSFLKLPTVRE*FLMYIK Trigger: TTTAATATACATAAGAAACCACTCCCTGACAGTAGG...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS CCA 90 bp | GAAGCCTTGTCCTGTTTCGTTATACTCAAAAGGCTGATGAGAAACTaGCCGAGCGAGATCCCGGCACAGACGGACGCCATCCCTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: EALSCFVILKRLMRN*PSEIPAQTDAIPFP Trigger: GGGGAAAGGGATGGCGTCCGTCTGTGCCGGGATCTCGCTCGGCCAGTTTCTCATCAGCCTTTTGAGTATAACGAAACAGGACAAGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS GCA 90 bp | TACCGTCACAGAAGAGTTTCTCATATTCGTTACGCTCGTAAGGACTaGTTCCTGAGAGAGCTGTGTGATGTCCAAACTGCAAATCCACAT | + |
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Preference number: 5 (lower is better) Translates to: YRHRRVSHIRYARKD*FLRELCDVQTANPH Trigger: ATGTGGATTTGCAGTTTGGACATCACACAGCTCTCTCAGGAAGCAGTCCTTACGAGCGTAACGAATATGAGAAACTCTTCTGTGACGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS TCA 90 bp | ACAGAAGAGTTTCTCATATTCGTTACGCTCGTAAGGACTGCTTCCTaGGAGAGCTGTGTGATGTCCAAACTGCAAATCCACATAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: TEEFLIFVTLVRTAS*ESCVMSKLQIHIEG Trigger: TCCTTCTATGTGGATTTGCAGTTTGGACATCACACAGCTCTCTCAGGAAGCAGTCCTTACGAGCGTAACGAATATGAGAAACTCTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CAA 90 bp | CGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTGACTGGGAGTTTCTCTaGTGTTACCTCCACCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: RWYFLVLCGILWQALSSFDWEFL*CYLHPL Trigger: TAGAGGGTGGAGGTAACACAAGAGAAACTCCCAGTC...AAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CAA 90 bp | CGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTGCTGAGAGTTCTGACTaGTACAAAGGGCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RWYFLVLCGILWQALSSFAESSD*YKGPLP Trigger: AGGAAGTGGCCCTTTGTACAAGTCAGAACTCTCAGC...AAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CAA 90 bp | CGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTATCCTTGAACGACACTaGCTCCTGGGATTTGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: RWYFLVLCGILWQALSSFILERH*LLGFVH Trigger: ATGAACAAATCCCAGGAGCAAGTGTCGTTCAAGGAT...AAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CAA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTATCCACGCATACATCCTaGAACGACACTTGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLVLCGILWQALSSFLKLSTHTS*NDTCSW Trigger: CCAGGAGCAAGTGTCGTTCAAGGATGTATGCGTGGA...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CAA 90 bp | AACACGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCCCAAAAATGTCCATCTaGATTTTCCTGGTTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NTMVFSSTLWYSLAGSKLPKMSI*IFLVAL Trigger: GAGAGCAACCAGGAAAATCAAGATGGACATTTTTGG...GAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CAA 90 bp | ATACAGCAGAGTGTTAGGAATGACAAGTGTTGTTTATTTCCTTTGCTCTCAGTAGCTGAGAGTTCTGACTaGTACAAAGGGCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IQQSVRNDKCCLFPLLSVAESSD*YKGPLP Trigger: AGGAAGTGGCCCTTTGTACAAGTCAGAACTCTCAGC...TACTGAGAGCAAAGGAAATAAACAACACTTGTCATTCCTAACACTCTGCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS TCA 90 bp | TTTGTGATCTTGTTGGTGAACATGAGTGGCCAAAAATGTCCATCTTaGTTTTCCTGGTTGCTCTCTAATAGGTCGTCCACTTTCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: FVILLVNMSGQKCPS*FSWLLSNRSSTFHF Trigger: GAAATGGAAAGTGGACGACCTATTAGAGAGCAACCAGGAAAATCAAGATGGACATTTTTGGCCACTCATGTTCACCAACAAGATCACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS-3UTR CAA 90 bp | AACACGATGGTATTTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCCATGAGTCACATACTTaGAGCAGAAAACTTCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: NTMVFSSTLWYSLAGSKLHESHT*SRKLLE Trigger: TTCAAGAAGTTTTCTGCTCAAAGTATGTGACTCATG...GAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAAATACCATCGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CAA 90 bp | GCAGGCTCTAAGCTCATTTTTAAAACTACAATGGACTTGACAGGCATGCGAAAGCATGAGTCACATACTTaGAGCAGAAAACTTCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: AGSKLIFKTTMDLTGMRKHESHT*SRKLLE Trigger: TTCAAGAAGTTTTCTGCTCAAAGTATGTGACTCATG...CTTTCGCATGCCTGTCAAGTCCATTGTAGTTTTAAAAATGAGCTTAGAGCCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS GCA 90 bp | GATGTCCAAACTGCAAATCCACATAGAAGGACTTTCTACAAATACTaGACTCATGAAGTTCTGTATGCAAACGTGTTTTCTGAGATACAC | + |
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Preference number: 5 (lower is better) Translates to: DVQTANPHRRTFYKY*THEVLYANVFSEIH Trigger: GTGTATCTCAGAAAACACGTTTGCATACAGAACTTCATGAGTGCAGTATTTGTAGAAAGTCCTTCTATGTGGATTTGCAGTTTGGACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS-3UTR CAA 90 bp | TTTCTAGTACTCTGTGGTATTCTTTGGCAGGCTCTAAGCTCATTTTTAAAACTATCTAGGTTTGTGATCTaGTTGGTGAACATGAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: FLVLCGILWQALSSFLKLSRFVI*LVNMSG Trigger: GCCACTCATGTTCACCAACAAGATCACAAACCTAGA...TAGTTTTAAAAATGAGCTTAGAGCCTGCCAAAGAATACCACAGAGTACTAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS CCA 72 bp | TCCTGTTTCGTTATACTCAAAAGGCTGATGAGAAACTaGCCGAGCGAGATCCCGGCACAGACGGACGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SCFVILKRLMRN*PSEIPAQTDAI Trigger: GATGGCGTCCGTCTGTGCCGGGATCTCGCTCGGCCAGTTTCTCATCAGCCTTTTGAGTATAACGAAACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS CCA 72 bp | AGGTCGTCCACTTTCCATTTCCTTTCTGGGTGGCACTaGAATCCATTTTCTGGTATCCAGGGATCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RSSTFHFLSGWH*NPFSGIQGSSP Trigger: AGGAGAAGATCCCTGGATACCAGAAAATGGATTCCAGTGCCACCCAGAAAGGAAATGGAAAGTGGACGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS CAA 90 bp | GAAGAGAGCTGGCTTTCCCCAAGTTCTGTTACTCACTTTATACTCTaGGGCGATCTTTCTCGTGTAAGCTTCCTGATGGACGATGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: EESWLSPSSVTHFIL*GDLSRVSFLMDDES Trigger: GCTTTCATCGTCCATCAGGAAGCTTACACGAGAAAGATCGCCCAAGAGTATAAAGTGAGTAACAGAACTTGGGGAAAGCCAGCTCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS CAA 72 bp | CTGACTTGTACAAAGGGCCACTTCCTCGCAGAAGCCTaGTCCTGTTTCGTTATACTCAAAAGGCTGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: LTCTKGHFLAEA*SCFVILKRLMR Trigger: TCTCATCAGCCTTTTGAGTATAACGAAACAGGACAAGGCTTCTGCGAGGAAGTGGCCCTTTGTACAAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS TCA 72 bp | TTTCTCATATTCGTTACGCTCGTAAGGACTGCTTCCTaGGAGAGCTGTGTGATGTCCAAACTGCAAATCCAC | + |
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Preference number: 6 (lower is better) Translates to: FLIFVTLVRTAS*ESCVMSKLQIH Trigger: GTGGATTTGCAGTTTGGACATCACACAGCTCTCTCAGGAAGCAGTCCTTACGAGCGTAACGAATATGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS GCA 72 bp | AGAAGAGTTTCTCATATTCGTTACGCTCGTAAGGACTaGTTCCTGAGAGAGCTGTGTGATGTCCAAACTGCA | + |
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Preference number: 6 (lower is better) Translates to: RRVSHIRYARKD*FLRELCDVQTA Trigger: TGCAGTTTGGACATCACACAGCTCTCTCAGGAAGCAGTCCTTACGAGCGTAACGAATATGAGAAACTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS CAA 72 bp | TGGCTTTCCCCAAGTTCTGTTACTCACTTTATACTCTaGGGCGATCTTTCTCGTGTAAGCTTCCTGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: WLSPSSVTHFIL*GDLSRVSFLMD Trigger: GTCCATCAGGAAGCTTACACGAGAAAGATCGCCCAAGAGTATAAAGTGAGTAACAGAACTTGGGGAAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS CCA 72 bp | GAAAACTTCTTGAAGATACAGAGTCAATGTCTGGACTaGGAGTTTCTCTTGTGTTACCTCCACCCTCTAGGT | + |
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Preference number: 6 (lower is better) Translates to: ENFLKIQSQCLD*EFLLCYLHPLG Trigger: ACCTAGAGGGTGGAGGTAACACAAGAGAAACTCCCAGTCCAGACATTGACTCTGTATCTTCAAGAAGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS TCA 72 bp | TTGTTGGTGAACATGAGTGGCCAAAAATGTCCATCTTaGTTTTCCTGGTTGCTCTCTAATAGGTCGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LLVNMSGQKCPS*FSWLLSNRSST Trigger: AGTGGACGACCTATTAGAGAGCAACCAGGAAAATCAAGATGGACATTTTTGGCCACTCATGTTCACCAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069292.14 |
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| CDS CCA 72 bp | TCCTACAGGAATCTTCTCACGCCTACTGTCAGGGAGTaGTTTCTTATGTATATTAAACTCGTTAAGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SYRNLLTPTVRE*FLMYIKLVKLL Trigger: AAGAAGCTTAACGAGTTTAATATACATAAGAAACCACTCCCTGACAGTAGGCGTGAGAAGATTCCTGTAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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| CDS GCA 72 bp | ACTGCAAATCCACATAGAAGGACTTTCTACAAATACTaGACTCATGAAGTTCTGTATGCAAACGTGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TANPHRRTFYKY*THEVLYANVFS Trigger: AGAAAACACGTTTGCATACAGAACTTCATGAGTGCAGTATTTGTAGAAAGTCCTTCTATGTGGATTTGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069292.14 ENSMUST00000161519.8 |
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