Pregenerated sensors for ZFP24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051469Ensembl transcript IDs: ENSMUST00000066497.12, ENSMUST00000153337.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCCAGTATCTCCAAAACCTTCTTGCCAGTGTTTGCACTTCTGTTaGGCACTCTCCCTAGCCTTTAAACTGTATGCCTCATCTCTAACC | + |
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Preference number: 1 (lower is better) Translates to: SPVSPKPSCQCLHFC*ALSLAFKLYASSLT Trigger: GGTTAGAGATGAGGCATACAGTTTAAAGGCTAGGGAGAGTGCTCAACAGAAGTGCAAACACTGGCAAGAAGGTTTTGGAGATACTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CCA 90 bp | GGAAATGTGTGGAAACTGTACTTGGATGTACAGTACACTGCAAAGTaGAACCAACCAGAAGCCCTGAAGAAAATGGTCTCTGCTCTTATA | + |
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Preference number: 1 (lower is better) Translates to: GNVWKLYLDVQYTAK*NQPEALKKMVSALI Trigger: TATAAGAGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGTTCCACTTTGCAGTGTACTGTACATCCAAGTACAGTTTCCACACATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR TCA 90 bp | AAGTCACATGATCTTTGGGTCCTTTTGCTAGTCCACAGTTCTAGGTaGGATTCGGTATTCATTCCAATCCAATGCTTAGCAAGCAAACTG | + |
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Preference number: 1 (lower is better) Translates to: KSHDLWVLLLVHSSR*DSVFIPIQCLASKL Trigger: CAGTTTGCTTGCTAAGCATTGGATTGGAATGAATACCGAATCTCACCTAGAACTGTGGACTAGCAAAAGGACCCAAAGATCATGTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR TCA 90 bp | CTTACAGAACACTCCAATGACCAACACAGAAATAAAGTAGCTGTCTaGAAAAGGAAAGAGACAAAGAACCAGGTAGCTCATTACTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LTEHSNDQHRNKVAV*KRKETKNQVAHYLG Trigger: CCCCAAGTAATGAGCTACCTGGTTCTTTGTCTCTTTCCTTTTTCAGACAGCTACTTTATTTCTGTGTTGGTCATTGGAGTGTTCTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR GCA 90 bp | ATATCTATTATGTATAAAGAACCTACTAACCCATCACTATGGGGTTaGTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATG | + |
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Preference number: 1 (lower is better) Translates to: ISIMYKEPTNPSLWG*LDGLLSVFMQWNAM Trigger: CATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCATAGTGATGGGTTAGTAGGTTCTTTATACATAATAGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CCA 90 bp | TCATCCATATCTATTATGTATAAAGAACCTACTAACCCATCACTATaGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAAT | + |
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Preference number: 1 (lower is better) Translates to: SSISIMYKEPTNPSL*GCLDGLLSVFMQWN Trigger: ATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCATAGTGATGGGTTAGTAGGTTCTTTATACATAATAGATATGGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTGACTCTGAGCCGACATCTCCCTCCAAACACAGCACACTGGCAAGAGAAGCTTCACTGGGTAAGTaGCCAGTGTGTCCCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: LADSEPTSPSKHSTLAREASLGK*PVCPLY Trigger: GTAGAGGGGACACACTGGGCACTTACCCAGTGAAGC...TTCTCTTGCCAGTGTGCTGTGTTTGGAGGGAGATGTCGGCTCAGAGTCAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | GACTCTGAGCCGACATCTCCCTCCAAACACAGCACACTGGCAAGAGAACTACAAGTGAGCGGGGAATGCTaGGGGGAAATCAATCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: DSEPTSPSKHSTLARELQVSGEC*GEINPL Trigger: CAAGGGATTGATTTCCCCTCAGCATTCCCCGCTCAC...TTGTAGTTCTCTTGCCAGTGTGCTGTGTTTGGAGGGAGATGTCGGCTCAGAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTGACTCTGAGCCGACATCTCCCTCCAAACACAGCACACTGGCAAGAGAACTGAAGAAAAAGACCTaGGTGCTGATTGTTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LADSEPTSPSKHSTLARELKKKT*VLIVSS Trigger: GGAGGAAACAATCAGCACTCAGGTCTTTTTCTTCAG...TTCTCTTGCCAGTGTGCTGTGTTTGGAGGGAGATGTCGGCTCAGAGTCAGCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTGACTCTGAGCCGACATCTCCCTCCAAACACAGCACACTGGCAAGAGAACAGTACCTGGCACAGTaGATTGTCGGTAGAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: LADSEPTSPSKHSTLAREQYLAQ*IVGRNV Trigger: AACATTTCTACCGACAATGCACTGTGCCAGGTACTG...TTCTCTTGCCAGTGTGCTGTGTTTGGAGGGAGATGTCGGCTCAGAGTCAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCAAGAATGCTAAGAGCTaGCTAGCTGACTCTGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: LLLCFHVTCSFGLGDKSIKNAKS*LADSEP Trigger: CGGCTCAGAGTCAGCTAGTCAGCTCTTAGCATTCTT...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | CAGTACACTGCAAAGTGGAACCAACCAGAAGCCCTGAAGAAAATGGTCTCTGCTCTACCATCTCTCATCTaGGATCTTAAGGCTCATCTG | + |
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Preference number: 2 (lower is better) Translates to: QYTAKWNQPEALKKMVSALPSLI*DLKAHL Trigger: CAGATGAGCCTTAAGATCTCAGATGAGAGATGGTAG...AGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGTTCCACTTTGCAGTGTACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR CCA 90 bp | GACTCTGAGCCGACATCTCCCTCCAAACACAGCACACTGGCAAGAGAACTACAACTGAGTCTGAGGCTTTaGCCTTTATCTTCTATTTTC | + |
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Preference number: 2 (lower is better) Translates to: DSEPTSPSKHSTLARELQLSLRL*PLSSIF Trigger: GAAAATAGAAGATAAAGGCCAAAGCCTCAGACTCAG...TTGTAGTTCTCTTGCCAGTGTGCTGTGTTTGGAGGGAGATGTCGGCTCAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR CCA 90 bp | CAGTACACTGCAAAGTGGAACCAACCAGAAGCCCTGAAGAAAATGGTCTCTGCTAAGTCACATGATCTTTaGGTCCTTTTGCTAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: QYTAKWNQPEALKKMVSAKSHDL*VLLLVH Trigger: GTGGACTAGCAAAAGGACCCAAAGATCATGTGACTT...AGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGTTCCACTTTGCAGTGTACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | CAGTACACTGCAAAGTGGAACCAACCAGAAGCCCTGAAGAAAATGGTCTCTGCTAAAAGACCTGAGTGCTaGTTGTTTCCTCCTAATTTC | + |
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Preference number: 2 (lower is better) Translates to: QYTAKWNQPEALKKMVSAKRPEC*LFPPNF Trigger: GAAATTAGGAGGAAACAATCAGCACTCAGGTCTTTT...AGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGTTCCACTTTGCAGTGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCCAAACTAAAAGAGTGTaGTTTGAACTCACCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LLLCFHVTCSFGLGDKSIQTKRV*FELTSE Trigger: TTCAGAGGTGAGTTCAAATCACACTCTTTTAGTTTG...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCACAAGTCCAAGTCACATaGTCTTTGGGTCCTTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: MGLLRWTVECFHAMECYAQVQVT*SLGPFA Trigger: AGCAAAAGGACCCAAAGATCATGTGACTTGGACTTG...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CAA 90 bp | ACTTTATCTAGAGCAGAGGAGTTTGCAGCTTTATTGGACATGAACTaGTTTCCTCTCAGCCACAGAGAAAAACCCAAACAGAAGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: TLSRAEEFAALLDMN*FPLSHREKPKQKSL Trigger: TAGGGACTTCTGTTTGGGTTTTTCTCTGTGGCTGAGAGGAAACAAGTTCATGTCCAATAAAGCTGCAAACTCCTCTGCTCTAGATAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAATTGTAAATAGCCAACTTCACTATTCTTCAGAGAAATGTAAGGACAGTACCAACCAGAAGCCCTaGAGAAAATGGTCTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: QGIVNSQLHYSSEKCKDSTNQKP*RKWSLL Trigger: GAGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGT...ACTGTCCTTACATTTCTCTGAAGAATAGTGAAGTTGGCTATTTACAATTCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR GCA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCAGAGTTCTGTCATCCCTaGGGGCTTTATATAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: MGLLRWTVECFHAMECYAEFCHP*GLYINV Trigger: CACATTTATATAAAGCCCGCAGGGATGACAGAACTC...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CAA 90 bp | CAATTCCAAGCTACTTTATCTAGAGCAGAGGAGTTTGCAGCTTTATaGGACATGAACTTGTTTCCTCTCAGCCACAGAGAAAAACCCAAA | + |
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Preference number: 2 (lower is better) Translates to: QFQATLSRAEEFAAL*DMNLFPLSHREKPK Trigger: TTTGGGTTTTTCTCTGTGGCTGAGAGGAAACAAGTTCATGTCCAATAAAGCTGCAAACTCCTCTGCTCTAGATAAAGTAGCTTGGAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCGTCCCCTCTACTCTCTaGAGTTTTGCTACCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: YRPNYIGSKCMSIDVIHIVPSTL*SFATIS Trigger: AGAGATGGTAGCAAAACTTCAGAGAGTAGAGGGGAC...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCTGAAGAAAAAGACCTaGGTGCTGATTGTTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FYFPVDFPSQQGKISFHILKKKT*VLIVSS Trigger: GGAGGAAACAATCAGCACTCAGGTCTTTTTCTTCAG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCAACTACAGATGTGCAATaGAGATATGTTACTATCTCA | + |
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Preference number: 2 (lower is better) Translates to: MGLLRWTVECFHAMECYATTDVQ*RYVTIS Trigger: TGAGATAGTAACATATCTCCATTGCACATCTGTAGT...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCACAAAGCACCAGATATaGCCCAAATCACTGGAACTA | + |
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Preference number: 2 (lower is better) Translates to: YRPNYIGSKCMSIDVIHITKHQI*PKSLEL Trigger: TAGTTCCAGTGATTTGGGTCATATCTGGTGCTTTGT...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAATTGTAAATAGCCAACTTCACTATTCTTCAGAGAAATGTAAGGACAGTGTTATCAGAAAATCATaGACAAGCTTCATTCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: QGIVNSQLHYSSEKCKDSVIRKS*TSFIRP Trigger: AGGCCGAATGAAGCTTGTTCATGATTTTCTGATAAC...ACTGTCCTTACATTTCTCTGAAGAATAGTGAAGTTGGCTATTTACAATTCCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR GCA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCTGTGGCATTTATTACTaGTTTTCAACAGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: YRPNYIGSKCMSIDVIHICGIYY*FSTGSG Trigger: GCCTGAGCCTGTTGAAAAGCAGTAATAAATGCCACA...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR CCA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCAACTCAAAGTCCTACTaGGAGAGAAGCCAGTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: YRPNYIGSKCMSIDVIHINSKSY*ERSQLL Trigger: TAACAACTGGCTTCTCTCCCAGTAGGACTTTGAGTT...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR TCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCAAAAGACCTGAGTGCTaGTTGTTTCCTCCTAATTTC | + |
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Preference number: 2 (lower is better) Translates to: FYFPVDFPSQQGKISFHIKRPEC*LFPPNF Trigger: GAAATTAGGAGGAAACAATCAGCACTCAGGTCTTTT...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCGAAATCAATCCCTTGTaGCTTACAGTGGAACAGATT | + |
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Preference number: 2 (lower is better) Translates to: YRPNYIGSKCMSIDVIHIEINPL*LTVEQI Trigger: AATCTGTTCCACTGTAAGTCACAAGGGATTGATTTC...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR GCA 90 bp | TATGAAATATCTGTACTTGCATGGATAGTTTTCCATGTAACAGTGCCTGTCTTATACTCTCTGAAGTTTTaGTACCATCTCTCATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: YEISVLAWIVFHVTVPVLYSLKF*YHLSSE Trigger: CTCAGATGAGAGATGGTAGCAAAACTTCAGAGAGTA...TAAGACAGGCACTGTTACATGGAAAACTATCCATGCAAGTACAGATATTTCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR GCA 72 bp | ACTGTGGCTAGGATGCTGTATGGCTTATGCCAAGCCTaGTCGTGTGCTCACCATAGTCATATGGGATGGGTT | + |
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Preference number: 3 (lower is better) Translates to: TVARMLYGLCQA*SCAHHSHMGWV Trigger: AACCCATCCCATATGACTATGGTGAGCACACGAGCAGGCTTGGCATAAGCCATACAGCATCCTAGCCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR GCA 72 bp | GACCTCATACGTTCACCAACTCTAATGCTACTTCTGTaGTTTCACGTCACATGCAGCTTTGGCCTCGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: DLIRSPTLMLLL*FHVTCSFGLGD Trigger: GTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAGCATTAGAGTTGGTGAACGTATGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR CAA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCATAGCAAACCTGATATaGTTACCCACCCCATCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LLLCFHVTCSFGLGDKSIIANLI*LPTPSR Trigger: CCTTGATGGGGTGGGTAACAATATCAGGTTTGCTAT...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR TCA 72 bp | TGTGATTTGAACTCACCTCTGAAGAATGCTAAGAGCTaGCTAGCTGACTCTGAGCCGACATCTCCCTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: CDLNSPLKNAKS*LADSEPTSPSK Trigger: TTTGGAGGGAGATGTCGGCTCAGAGTCAGCTAGTCAGCTCTTAGCATTCTTCAGAGGTGAGTTCAAATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR GCA 72 bp | AAGTGCCCAGTGTGTCCCCTCTACTCTCTGAAGTTTTaGTACCATCTCTCATCTGAGATCTTAAGGCTCATC | + |
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Preference number: 3 (lower is better) Translates to: KCPVCPLYSLKF*YHLSSEILRLI Trigger: GATGAGCCTTAAGATCTCAGATGAGAGATGGTAGCAAAACTTCAGAGAGTAGAGGGGACACACTGGGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR TCA 72 bp | CCTCTACTCTCTGAAGTTTTGCTACCATCTCTCATCTaGGATCTTAAGGCTCATCTGAGTCTGAGGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: PLLSEVLLPSLI*DLKAHLSLRLW Trigger: CCAAAGCCTCAGACTCAGATGAGCCTTAAGATCTCAGATGAGAGATGGTAGCAAAACTTCAGAGAGTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR TCA 72 bp | TCAGTTAGTATGCATGCACTAACAGAATTGCTAACCTaGAAGGTGCTAGCTAGGCCACTGCTTGGCACTTGT | + |
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Preference number: 3 (lower is better) Translates to: SVSMHALTELLT*KVLARPLLGTC Trigger: ACAAGTGCCAAGCAGTGGCCTAGCTAGCACCTTTCAGGTTAGCAATTCTGTTAGTGCATGCATACTAACTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR TCA 72 bp | TCTCCAAAACCTTCTTGCCAGTGTTTGCACTTCTGTTaGGCACTCTCCCTAGCCTTTAAACTGTATGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SPKPSCQCLHFC*ALSLAFKLYAS Trigger: TGAGGCATACAGTTTAAAGGCTAGGGAGAGTGCTCAACAGAAGTGCAAACACTGGCAAGAAGGTTTTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR GCA 72 bp | CCAACTCTAATGCTACTTCTGTGCTTTCACGTCACATaGAGCTTTGGCCTCGGAGACAAATCTATCCTAAAC | + |
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Preference number: 3 (lower is better) Translates to: PTLMLLLCFHVT*SFGLGDKSILN Trigger: GTTTAGGATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAGCATTAGAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CCA 72 bp | GAACAAGCTTCATTCGGCCTCACTTCACTAGCTGTGTaGCATTTATTACTGCTTTTCAACAGGCTCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: EQASFGLTSLAV*HLLLLFNRLRQ Trigger: TTGCCTGAGCCTGTTGAAAAGCAGTAATAAATGCCACACAGCTAGTGAAGTGAGGCCGAATGAAGCTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CCA 72 bp | AATGCTACTTCTGTGCTTTCACGTCACATGCAGCTTTaGCCTCGGAGACAAATCTATCCTAAACTGTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: NATSVLSRHMQL*PRRQIYPKLLS Trigger: GCTTAACAGTTTAGGATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR CAA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCAACCTGGCACAGTGCATaGTCGGTAGAAATGTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: MGLLRWTVECFHAMECYATWHSA*SVEMFN Trigger: ATTAAACATTTCTACCGACAATGCACTGTGCCAGGT...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CCA 72 bp | CTGCATATTCATATGGAAATGTGTGGAAACTGTACTTaGATGTACAGTACACTGCAAAGTGGAACCAACCAG | + |
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Preference number: 3 (lower is better) Translates to: LHIHMEMCGNCT*MYSTLQSGTNQ Trigger: CTGGTTGGTTCCACTTTGCAGTGTACTGTACATCCAAGTACAGTTTCCACACATTTCCATATGAATATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR CAA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCTCTGAGTCTGAGGCTTaGGCCTTTATCTTCTATTTT | + |
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Preference number: 3 (lower is better) Translates to: YRPNYIGSKCMSIDVIHISESEA*AFIFYF Trigger: AAAATAGAAGATAAAGGCCAAAGCCTCAGACTCAGA...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR-3UTR CAA 90 bp | TATGAAATATCTGTACTTGCATGGATAGTTTTCCATGTAACAGTGCCTGTCTTACTAAAAGAGTGTGATTaGAACTCACCTCTGAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: YEISVLAWIVFHVTVPVLLKECD*NSPLKN Trigger: ATTCTTCAGAGGTGAGTTCAAATCACACTCTTTTAG...TAAGACAGGCACTGTTACATGGAAAACTATCCATGCAAGTACAGATATTTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR GCA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCAGCACTTCCCGTTTCTaGCGACGGAGAGAAACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFHVTCSFGLGDKSISTSRF*RRRETG Trigger: GCCGGTTTCTCTCCGTCGGCAGAAACGGGAAGTGCT...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR TCA 90 bp | CAGTACACTGCAAAGTGGAACCAACCAGAAGCCCTGAAGAAAATGGTCTCTGCTCCCAGGATGCCCACTTaGGCTGGTTCTCTACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QYTAKWNQPEALKKMVSAPRMPT*AGSLQH Trigger: ATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGG...AGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGTTCCACTTTGCAGTGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR CCA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCCTTTGTGTGTGTCTCTaGTCTGAGCCACAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFHVTCSFGLGDKSILCVCL*SEPQAA Trigger: TGCCGCCTGTGGCTCAGACCAGAGACACACACAAAG...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR CCA 90 bp | GACTCTGAGCCGACATCTCCCTCCAAACACAGCACACTGGCAAGAGAACTACAACTCCATTTTCTGTCGTaGCATCATCATCACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSEPTSPSKHSTLARELQLHFLS*HHHHSA Trigger: GGCACTGTGATGATGATGCCACGACAGAAAATGGAG...TTGTAGTTCTCTTGCCAGTGTGCTGTGTTTGGAGGGAGATGTCGGCTCAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| 3UTR CAA 72 bp | CATCATCCTCGGGTCTCCAGTATCTCCAAAACCTTCTaGCCAGTGTTTGCACTTCTGTTGAGCACTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHPRVSSISKTF*PVFALLLSTLP Trigger: AGGGAGAGTGCTCAACAGAAGTGCAAACACTGGCAAGAAGGTTTTGGAGATACTGGAGACCCGAGGATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR TCA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCACGGAGAGAAACCGGCTaGCCAGGGTCATCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGLLRWTVECFHAMECYARRETG*PGSSSS Trigger: TGAGCTTGATGACCCTGGTCAGCCGGTTTCTCTCCG...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR GCA 90 bp | CAGTACACTGCAAAGTGGAACCAACCAGAAGCCCTGAAGAAAATGGTCTCTGCTGCATCATCATCACAGTaGCTCAGAGAGTGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QYTAKWNQPEALKKMVSAASSSQ*LREWSS Trigger: GGAACTCCACTCTCTGAGGCACTGTGATGATGATGC...AGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGTTCCACTTTGCAGTGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR GCA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCACCAGCTCCAGTATCTaGTCCTTTGTGTGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFHVTCSFGLGDKSITSSSI*SFVCVS Trigger: AGAGACACACACAAAGGAGCAGATACTGGAGCTGGT...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR GCA 90 bp | GCTGACAGACCTCATACGTTCACCAACTCTAATGCTACTTCTGTGCTTTCACGTGATGGTTCCAGGAAATaGTCGATCCCTCTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPHTFTNSNATSVLSRDGSRK*SIPLHH Trigger: ATGGTGAAGAGGGATCGAGCATTTCCTGGAACCATC...ACGTGAAAGCACAGAAGTAGCATTAGAGTTGGTGAACGTATGAGGTCTGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR TCA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCACCAGTGTGGATACGCTaGTGGTTAATGAGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGLLRWTVECFHAMECYAPVWIR*WLMSPE Trigger: TTCTGGGCTCATTAACCATCAGCGTATCCACACTGG...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR CCA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCAAAGCCATCTCCTGCTTaGGAGCCAGTGCTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: MGLLRWTVECFHAMECYAKPSPA*EPVLHF Trigger: AAAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTT...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR TCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCGGAGAGAAACCGGCTaGCCAGGGTCATCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIRRETG*PGSSSS Trigger: TGAGCTTGATGACCCTGGTCAGCCGGTTTCTCTCCG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAATTGTAAATAGCCAACTTCACTATTCTTCAGAGAAATGTAAGGACAGTATGAGGGCGGAGCCCTaGCTGAAGTGTTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGIVNSQLHYSSEKCKDSMRAEP*LKCFPH Trigger: ATGTGGGAAACACTTCAGTCAGGGCTCCGCCCTCAT...ACTGTCCTTACATTTCTCTGAAGAATAGTGAAGTTGGCTATTTACAATTCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR TCA 90 bp | GCTGACAGACCTCATACGTTCACCAACTCTAATGCTACTTCTGTGCTTTCACGTATGTCTGAAGAGGTTTaGGCTCTGACTGTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPHTFTNSNATSVLSRMSEEV*ALTVGF Trigger: AAATCCTACAGTCAGAGCTCAAACCTCTTCAGACAT...ACGTGAAAGCACAGAAGTAGCATTAGAGTTGGTGAACGTATGAGGTCTGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCAGCACTTCCCGTTTCTaGCGACGGAGAGAAACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHISTSRF*RRRETG Trigger: GCCGGTTTCTCTCCGTCGGCAGAAACGGGAAGTGCT...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR GCA 90 bp | CAGGGAATTGTAAATAGCCAACTTCACTATTCTTCAGAGAAATGTAAGGACAGTGTGGAGTTCCCAGGATaGCCACTTGAGCTGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGIVNSQLHYSSEKCKDSVEFPG*PLELVL Trigger: GAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCAC...ACTGTCCTTACATTTCTCTGAAGAATAGTGAAGTTGGCTATTTACAATTCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR CCA 90 bp | CAGTACACTGCAAAGTGGAACCAACCAGAAGCCCTGAAGAAAATGGTCTCTGCTTTTCAAACCTACCCTTaGGAAAACAGGTTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QYTAKWNQPEALKKMVSAFQTYP*ENRFLH Trigger: ATGGAGAAACCTGTTTTCCCAAGGGTAGGTTTGAAA...AGCAGAGACCATTTTCTTCAGGGCTTCTGGTTGGTTCCACTTTGCAGTGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR TCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCCCAGGATGCCCACTTaGGCTGGTTCTCTACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIPRMPT*AGSLQH Trigger: ATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR TCA 90 bp | TATGAAATATCTGTACTTGCATGGATAGTTTTCCATGTAACAGTGCCTGTCTTAATGAGACTCTCCAGCTaGAGCCATCTCCTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YEISVLAWIVFHVTVPVLMRLSS*SHLLLG Trigger: CCCAAGCAGGAGATGGCTTCAGCTGGAGAGTCTCAT...TAAGACAGGCACTGTTACATGGAAAACTATCCATGCAAGTACAGATATTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR TCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCATGAGGGCGGAGCCCTaGCTGAAGTGTTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIMRAEP*LKCFPH Trigger: ATGTGGGAAACACTTCAGTCAGGGCTCCGCCCTCAT...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCGTGGAGTTCCCAGGATaGCCACTTGAGCTGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIVEFPG*PLELVL Trigger: GAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCAC...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR GCA 90 bp | TATGAAATATCTGTACTTGCATGGATAGTTTTCCATGTAACAGTGCCTGTCTTACTGCTTGGGAGCCAGTaGTCCATTTTCTGTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YEISVLAWIVFHVTVPVLLLGSQ*SIFCRG Trigger: GCCACGACAGAAAATGGAGCACTGGCTCCCAAGCAG...TAAGACAGGCACTGTTACATGGAAAACTATCCATGCAAGTACAGATATTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR GCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCTGCTTGGGAGCCAGTaGTCCATTTTCTGTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHILLGSQ*SIFCRG Trigger: GCCACGACAGAAAATGGAGCACTGGCTCCCAAGCAG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCTTTGTGTGTGTCTCTaGTCTGAGCCACAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHILCVCL*SEPQAA Trigger: TGCCGCCTGTGGCTCAGACCAGAGACACACACAAAG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CCA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCAAAGTCTGTAGCTCCTTaGGTAGGATGGCAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: MGLLRWTVECFHAMECYAKSVAP*VGWQQT Trigger: AGTTTGTTGCCATCCTACCCAAGGAGCTACAGACTT...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CCA 90 bp | CAGGGAATTGTAAATAGCCAACTTCACTATTCTTCAGAGAAATGTAAGGACAGTGATGCCCACTTGAGCTaGTTCTCTACAGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGIVNSQLHYSSEKCKDSDAHLS*FSTASS Trigger: GCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATC...ACTGTCCTTACATTTCTCTGAAGAATAGTGAAGTTGGCTATTTACAATTCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CAA 72 bp | GCTACTTTATCTAGAGCAGAGGAGTTTGCAGCTTTATaGGACATGAACTTGTTTCCTCTCAGCCACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATLSRAEEFAAL*DMNLFPLSHRE Trigger: TTCTCTGTGGCTGAGAGGAAACAAGTTCATGTCCAATAAAGCTGCAAACTCCTCTGCTCTAGATAAAGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| 3UTR CAA 72 bp | ACTAACCCATCACTATGGGGTTGCTTAGATGGACTGTaGAGTGTTTTCATGCAATGGAATGCTATGCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TNPSLWGCLDGL*SVFMQWNAMQL Trigger: TAGCTGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCATAGTGATGGGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR GCA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCATTCAAAAGTTTTTCTaGATTGTGTCGTCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFHVTCSFGLGDKSIIQKFF*IVSSLM Trigger: CATCAGAGACGACACAATGCAGAAAAACTTTTGAAT...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCGATGCCCACTTGAGCTaGTTCTCTACAGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIDAHLS*FSTASS Trigger: GCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATC...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR TCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCCAGTGTGGATACGCTaGTGGTTAATGAGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIPVWIR*WLMSPE Trigger: TTCTGGGCTCATTAACCATCAGCGTATCCACACTGG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCGCATCATCATCACAGTaGCTCAGAGAGTGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIASSSQ*LREWSS Trigger: GGAACTCCACTCTCTGAGGCACTGTGATGATGATGC...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCAAGCCATCTCCTGCTTaGGAGCCAGTGCTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIKPSPA*EPVLHF Trigger: AAAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTT...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCGATGGTTCCAGGAAATaGTCGATCCCTCTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIDGSRK*SIPLHH Trigger: ATGGTGAAGAGGGATCGAGCATTTCCTGGAACCATC...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCACCAGCTCCAGTATCTaGTCCTTTGTGTGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHITSSSI*SFVCVS Trigger: AGAGACACACACAAAGGAGCAGATACTGGAGCTGGT...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR GCA 90 bp | TATGAAATATCTGTACTTGCATGGATAGTTTTCCATGTAACAGTGCCTGTCTTAAGGATGGCAACAAACTaGTCCAAAACTACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YEISVLAWIVFHVTVPVLRMATN*SKTTSS Trigger: GGAGCTGGTAGTTTTGGAGCAGTTTGTTGCCATCCT...TAAGACAGGCACTGTTACATGGAAAACTATCCATGCAAGTACAGATATTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR CCA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCGCTCCTTGGGTAGGATaGCAACAAACTGCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRPNYIGSKCMSIDVIHIAPWVG*QQTAPK Trigger: TTTTGGAGCAGTTTGTTGCCATCCTACCCAAGGAGC...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
||
| CDS-3UTR CCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCGCTCCTTGGGTAGGATaGCAACAAACTGCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIAPWVG*QQTAPK Trigger: TTTTGGAGCAGTTTGTTGCCATCCTACCCAAGGAGC...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR CCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCTCCATTTTCTGTCGTaGCATCATCATCACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHILHFLS*HHHHSA Trigger: GGCACTGTGATGATGATGCCACGACAGAAAATGGAG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR TCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCATGTCTGAAGAGGTTTaGGCTCTGACTGTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIMSEEV*ALTVGF Trigger: AAATCCTACAGTCAGAGCTCAAACCTCTTCAGACAT...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR CCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCTTTCAAACCTACCCTTaGGAAAACAGGTTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIFQTYP*ENRFLH Trigger: ATGGAGAAACCTGTTTTCCCAAGGGTAGGTTTGAAA...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCATTCAAAAGTTTTTCTaGATTGTGTCGTCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FYFPVDFPSQQGKISFHIIQKFF*IVSSLM Trigger: CATCAGAGACGACACAATGCAGAAAAACTTTTGAAT...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS GCA 90 bp | AGCGCTGCCGGAAAACCTCCGGGTCAGGGAGATGGTTCCAGGAAATaGTCGATCCCTCTTCACCATCAGGATCCTCCTCTAGTTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SAAGKPPGQGDGSRK*SIPLHHQDPPLVSL Trigger: GAGTGAAACTAGAGGAGGATCCTGATGGTGAAGAGGGATCGAGCATTTCCTGGAACCATCTCCCTGACCCGGAGGTTTTCCGGCAGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS GCA 90 bp | CGTGGCATCATCATCACAGTGCCTCAGAGAGTGGAGTTCCCAGGATaGCCACTTGAGCTGGTTCTCTACAGCATCCAGCTCAGAACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGIIITVPQRVEFPG*PLELVLYSIQLRTR Trigger: CCGAGTTCTGAGCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCACTCTCTGAGGCACTGTGATGATGATGCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
||
| CDS CCA 90 bp | TGCCGGGGCCTTCATGAGACTCTCCAGCTGAAGCCATCTCCTGCTTaGGAGCCAGTGCTCCATTTTCTGTCGTGGCATCATCATCACAGT | + |
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Preference number: 5 (lower is better) Translates to: CRGLHETLQLKPSPA*EPVLHFLSWHHHHS Trigger: ACTGTGATGATGATGCCACGACAGAAAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTTCAGCTGGAGAGTCTCATGAAGGCCCCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS TCA 90 bp | AACACCTATGTTGAGAGTGCCGGGGCCTTCATGAGACTCTCCAGCTaGAGCCATCTCCTGCTTGGGAGCCAGTGCTCCATTTTCTGTCGT | + |
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Preference number: 5 (lower is better) Translates to: NTYVESAGAFMRLSS*SHLLLGSQCSIFCR Trigger: ACGACAGAAAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTTCAGCTGGAGAGTCTCATGAAGGCCCCGGCACTCTCAACATAGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS CCA 90 bp | CTGAAGCCATCTCCTGCTTGGGAGCCAGTGCTCCATTTTCTGTCGTaGCATCATCATCACAGTGCCTCAGAGAGTGGAGTTCCCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: LKPSPAWEPVLHFLS*HHHHSASESGVPRM Trigger: CATCCTGGGAACTCCACTCTCTGAGGCACTGTGATGATGATGCCACGACAGAAAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS TCA 90 bp | CATCATCACAGTGCCTCAGAGAGTGGAGTTCCCAGGATGCCCACTTaGGCTGGTTCTCTACAGCATCCAGCTCAGAACTCGGTAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: HHHSASESGVPRMPT*AGSLQHPAQNSVIP Trigger: AGGGATTACCGAGTTCTGAGCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCACTCTCTGAGGCACTGTGATGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS CCA 90 bp | GCTCCATTTTCTGTCGTGGCATCATCATCACAGTGCCTCAGAGAGTaGAGTTCCCAGGATGCCCACTTGAGCTGGTTCTCTACAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: APFSVVASSSQCLRE*SSQDAHLSWFSTAS Trigger: GGATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCACTCTCTGAGGCACTGTGATGATGATGCCACGACAGAAAATGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CAA 90 bp | CTACTTCTGTGCTTTCACGTCACATGCAGCTTTGGCCTCGGAGACAAATCTATCGAAGCCATCTCCTGCTaGGGAGCCAGTGCTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: LLLCFHVTCSFGLGDKSIEAISC*GASAPF Trigger: AAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTTC...GATAGATTTGTCTCCGAGGCCAAAGCTGCATGTGACGTGAAAGCACAGAAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CAA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCATGGGGAACACCTATGTaGAGAGTGCCGGGGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: MGLLRWTVECFHAMECYAWGTPM*RVPGPS Trigger: TGAAGGCCCCGGCACTCTCAACATAGGTGTTCCCCA...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CAA 90 bp | CAGGGAATTGTAAATAGCCAACTTCACTATTCTTCAGAGAAATGTAAGGACAGTTCCCAGGATGCCCACTaGAGCTGGTTCTCTACAGCA | + |
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Preference number: 5 (lower is better) Translates to: QGIVNSQLHYSSEKCKDSSQDAH*SWFSTA Trigger: TGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGA...ACTGTCCTTACATTTCTCTGAAGAATAGTGAAGTTGGCTATTTACAATTCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CAA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCTGGGGAACACCTATGTaGAGAGTGCCGGGGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: FYFPVDFPSQQGKISFHIWGTPM*RVPGPS Trigger: TGAAGGCCCCGGCACTCTCAACATAGGTGTTCCCCA...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CAA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCGAAGCCATCTCCTGCTaGGGAGCCAGTGCTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: FYFPVDFPSQQGKISFHIEAISC*GASAPF Trigger: AAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTTC...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CAA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCACTTTCAAACCTACCCTaGGGAAAACAGGTTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: MGLLRWTVECFHAMECYALSNLP*GKQVSP Trigger: TGGAGAAACCTGTTTTCCCAAGGGTAGGTTTGAAAG...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CAA 90 bp | ATGGGGTTGCTTAGATGGACTGTTGAGTGTTTTCATGCAATGGAATGCTATGCATCCCTGAGCATCTTCTaGAGATGTTATCTCTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: MGLLRWTVECFHAMECYASLSIF*RCYLFY Trigger: GTAGAAGAGATAACATCTCAAGAAGATGCTCAGGGA...TGCATAGCATTCCATTGCATGAAAACACTCAACAGTCCATCTAAGCAACCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CAA 90 bp | TACAGACCCAACTACATAGGTAGTAAATGTATGTCTATAGATGTCATCCATATCCAAGTCTGTAGCTCCTaGGGTAGGATGGCAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: YRPNYIGSKCMSIDVIHIQVCSS*GRMATN Trigger: GTTTGTTGCCATCCTACCCAAGGAGCTACAGACTTG...GATATGGATGACATCTATAGACATACATTTACTACCTATGTAGTTGGGTCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066497.12 |
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| CDS-3UTR CAA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCAAGTCTGTAGCTCCTaGGGTAGGATGGCAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: FYFPVDFPSQQGKISFHIQVCSS*GRMATN Trigger: GTTTGTTGCCATCCTACCCAAGGAGCTACAGACTTG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CAA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCCTTTCAAACCTACCCTaGGGAAAACAGGTTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: FYFPVDFPSQQGKISFHILSNLP*GKQVSP Trigger: TGGAGAAACCTGTTTTCCCAAGGGTAGGTTTGAAAG...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS-3UTR CAA 90 bp | TTCTATTTCCCAGTAGATTTTCCCAGTCAACAGGGAAAAATAAGTTTCCATATCTCCCTGAGCATCTTCTaGAGATGTTATCTCTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: FYFPVDFPSQQGKISFHISLSIF*RCYLFY Trigger: GTAGAAGAGATAACATCTCAAGAAGATGCTCAGGGA...GATATGGAAACTTATTTTTCCCTGTTGACTGGGAAAATCTACTGGGAAATAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS CCA 72 bp | CTGAAGCGCTGCCGGAAAACCTCCGGGTCAGGGAGATaGTTCCAGGAAATGCTCGATCCCTCTTCACCATCA | + |
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Preference number: 6 (lower is better) Translates to: LKRCRKTSGSGR*FQEMLDPSSPS Trigger: TGATGGTGAAGAGGGATCGAGCATTTCCTGGAACCATCTCCCTGACCCGGAGGTTTTCCGGCAGCGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS TCA 72 bp | AGTGCCTCAGAGAGTGGAGTTCCCAGGATGCCCACTTaGGCTGGTTCTCTACAGCATCCAGCTCAGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: SASESGVPRMPT*AGSLQHPAQNS Trigger: CGAGTTCTGAGCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCACTCTCTGAGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS GCA 72 bp | GGAAAACCTCCGGGTCAGGGAGATGGTTCCAGGAAATaGTCGATCCCTCTTCACCATCAGGATCCTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: GKPPGQGDGSRK*SIPLHHQDPPL Trigger: TAGAGGAGGATCCTGATGGTGAAGAGGGATCGAGCATTTCCTGGAACCATCTCCCTGACCCGGAGGTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS GCA 72 bp | ATCATCACAGTGCCTCAGAGAGTGGAGTTCCCAGGATaGCCACTTGAGCTGGTTCTCTACAGCATCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: IITVPQRVEFPG*PLELVLYSIQL Trigger: GAGCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCACTCTCTGAGGCACTGTGATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS CAA 90 bp | TCATCATCACAGTGCCTCAGAGAGTGGAGTTCCCAGGATGCCCACTaGAGCTGGTTCTCTACAGCATCCAGCTCAGAACTCGGTAATCCC | + |
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Preference number: 6 (lower is better) Translates to: SSSQCLREWSSQDAH*SWFSTASSSELGNP Trigger: GGGATTACCGAGTTCTGAGCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCACTCTCTGAGGCACTGTGATGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS CCA 72 bp | TCTCCTGCTTGGGAGCCAGTGCTCCATTTTCTGTCGTaGCATCATCATCACAGTGCCTCAGAGAGTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: SPAWEPVLHFLS*HHHHSASESGV Trigger: AACTCCACTCTCTGAGGCACTGTGATGATGATGCCACGACAGAAAATGGAGCACTGGCTCCCAAGCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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| CDS CCA 72 bp | CTTCATGAGACTCTCCAGCTGAAGCCATCTCCTGCTTaGGAGCCAGTGCTCCATTTTCTGTCGTGGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LHETLQLKPSPA*EPVLHFLSWHH Trigger: ATGATGCCACGACAGAAAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTTCAGCTGGAGAGTCTCATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066497.12 ENSMUST00000153337.2 |
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