Pregenerated sensors for ZFP235 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047603Ensembl transcript IDs: ENSMUST00000056549.9, ENSMUST00000205680.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCTCTGCACAGCAGATACAGAGAGGAGCTTCCTATGAGGAAGTaGTGCTTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: AALHSRYREELPMRK*CFSQRRFCQSPAVV Trigger: AACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGCTCCTCTCTGTATCTGCTGTGCAGAGCTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR TCA 90 bp | AGCCACATGCAGCTCTGCACAGCAGATACAGAGAGGAGCTTCCTATaGGGAAGTGATGCTTCAGTCAACGGCGGTTCTGCCAATCACCAG | + |
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Preference number: 1 (lower is better) Translates to: SHMQLCTADTERSFL*GSDASVNGGSANHQ Trigger: CTGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGCTCCTCTCTGTATCTGCTGTGCAGAGCTGCATGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 90 bp | CAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATaGATGCTGAGATTTCCTGCTCCGTCATATCCTGAGGGTGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: QLWLKHFLQPFWRLG*MLRFPAPSYPEGGN Trigger: GTTGCCACCCTCAGGATATGACGGAGCAGGAAATCTCAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 90 bp | GGAAGTGATGCTTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTaGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATG | + |
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Preference number: 1 (lower is better) Translates to: GSDASVNGGSANHQL*LKHFLQPFWRLGWM Trigger: CATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 90 bp | AATTTGAGCCTTACTTGCAGGGGCTTTTCTAACTTGCTCCAGGAATaGCTGGGTCCTGAGCCACATGCAGCTCTGCACAGCAGATACAGA | + |
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Preference number: 1 (lower is better) Translates to: NLSLTCRGFSNLLQE*LGPEPHAALHSRYR Trigger: TCTGTATCTGCTGTGCAGAGCTGCATGTGGCTCAGGACCCAGCCATTCCTGGAGCAAGTTAGAAAAGCCCCTGCAAGTAAGGCTCAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 90 bp | TCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTaGAGACTTGGATGGATGCTGAGATTTCCTGCTCCGTCATATCCT | + |
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Preference number: 1 (lower is better) Translates to: SANHQLWLKHFLQPF*RLGWMLRFPAPSYP Trigger: AGGATATGACGGAGCAGGAAATCTCAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR GCA 90 bp | TTTAGTCTATTAAGTACAAATACTAAAACTCATCCAGTACAGAGTTaGTATTGCCATGCAAAGCACCATGCTAGAGAGGCAGGTCACACA | + |
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Preference number: 1 (lower is better) Translates to: FSLLSTNTKTHPVQS*YCHAKHHAREAGHT Trigger: TGTGTGACCTGCCTCTCTAGCATGGTGCTTTGCATGGCAATAGCAACTCTGTACTGGATGAGTTTTAGTATTTGTACTTAATAGACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCTATGAGGAAGTGATGCTTCAGTCAACGGCGGTTCTGCCAATCACCAGCTTCCTGCAGCCTTTCTaGAGACTTGGATGGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: ASYEEVMLQSTAVLPITSFLQPF*RLGWML Trigger: CAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAA...GCTGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR-3UTR TCA 90 bp | CGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACAGAGCAAGTTCCATaGCAGCCAAAGAAATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RFCQSPAVVKALPAAFLETEQVP*QPKKSG Trigger: ACCAGATTTCTTTGGCTGTCATGGAACTTGCTCTGT...CTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR-3UTR TCA 90 bp | TATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTATAACATTTATAAAGAACTaGTCTCCCAGCTGGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: YPEGGNLRTLVHGNSTFITFIKN*SPSWAH Trigger: GTGTGCCCAGCTGGGAGATCAGTTCTTTATAAATGT...TATAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 72 bp | CTTACTTGCAGGGGCTTTTCTAACTTGCTCCAGGAATaGCTGGGTCCTGAGCCACATGCAGCTCTGCACAGC | + |
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Preference number: 3 (lower is better) Translates to: LTCRGFSNLLQE*LGPEPHAALHS Trigger: GCTGTGCAGAGCTGCATGTGGCTCAGGACCCAGCCATTCCTGGAGCAAGTTAGAAAAGCCCCTGCAAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR TCA 72 bp | CAGCTCTGCACAGCAGATACAGAGAGGAGCTTCCTATaGGGAAGTGATGCTTCAGTCAACGGCGGTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: QLCTADTERSFL*GSDASVNGGSA Trigger: GGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGCTCCTCTCTGTATCTGCTGTGCAGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR TCA 72 bp | ACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATGCTaGGATTTCCTGCTCCGTCATATCCTGAGGGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: TSCSLSGDLDGC*DFLLRHILRVA Trigger: TGCCACCCTCAGGATATGACGGAGCAGGAAATCTCAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 72 bp | CACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTaGAGACTTGGATGGATGCTGAGATTTCCTGCTCCG | + |
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Preference number: 3 (lower is better) Translates to: HQLWLKHFLQPF*RLGWMLRFPAP Trigger: CGGAGCAGGAAATCTCAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 72 bp | GCTTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTaGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTT | + |
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Preference number: 3 (lower is better) Translates to: ASVNGGSANHQL*LKHFLQPFWRL Trigger: AAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR TCA 72 bp | CACAGCAGATACAGAGAGGAGCTTCCTATGAGGAAGTaGTGCTTCAGTCAACGGCGGTTCTGCCAATCACCA | + |
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Preference number: 3 (lower is better) Translates to: HSRYREELPMRK*CFSQRRFCQSP Trigger: TGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGCTCCTCTCTGTATCTGCTGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 72 bp | GTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTaGATGGATGCTGAGATTTCCTGCTCCGTCATATCC | + |
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Preference number: 3 (lower is better) Translates to: VVKALPAAFLET*MDAEISCSVIS Trigger: GGATATGACGGAGCAGGAAATCTCAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CCA 72 bp | TTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATaGATGCTGAGATTTCCTGCTCCGTCATATCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LKHFLQPFWRLG*MLRFPAPSYPE Trigger: CTCAGGATATGACGGAGCAGGAAATCTCAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR TCA 72 bp | GGGAATACGACTCAATATGAATGCAGGGTTGAGGGTTaGCAAGTGTTTTCGAATTTGAGCCTTACTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GNTTQYECRVEG*QVFSNLSLTCR Trigger: CCTGCAAGTAAGGCTCAAATTCGAAAACACTTGTCAACCCTCAACCCTGCATTCATATTGAGTCGTATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CCGGTGAAGTCTCCTGAAGCCTCTGGGTTTGAGGAAAGCAGCGTGGAGCCCACCCCTGTGTGCACTCTCTaGTGGGCCTGGAGGTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PVKSPEASGFEESSVEPTPVCTL*WAWRCE Trigger: CTCGCACCTCCAGGCCCATCAGAGAGTGCACACAGG...GGTGGGCTCCACGCTGCTTTCCTCAAACCCAGAGGCTTCAGGAGACTTCACCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CCGGTGAAGTCTCCTGAAGCCTCTGGGTTTGAGGAAAGCAGCGTGGAGCCCACCTGGAGGTGCGAGGCCTaGCTGAATCGCTTCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PVKSPEASGFEESSVEPTWRCEA*LNRFWH Trigger: GTGCCAGAAGCGATTCAGTCAGGCCTCGCACCTCCA...GGTGGGCTCCACGCTGCTTTCCTCAAACCCAGAGGCTTCAGGAGACTTCACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CCGGTGAAGTCTCCTGAAGCCTCTGGGTTTGAGGAAAGCAGCGTGGAGCCCACCGTGAGTGTGGAAGTGTaGGGCCTGACTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PVKSPEASGFEESSVEPTVSVEV*GLTEAL Trigger: AAGGGCTTCAGTCAGGCCTCACACTTCCACACTCAC...GGTGGGCTCCACGCTGCTTTCCTCAAACCCAGAGGCTTCAGGAGACTTCACCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CCA 90 bp | CCGGTGAAGTCTCCTGAAGCCTCTGGGTTTGAGGAAAGCAGCGTGGAGCCCACCTCTCGCCTGTGTGGATaGGCAGGTGAGCATACAGGT | + |
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Preference number: 4 (lower is better) Translates to: PVKSPEASGFEESSVEPTSRLCG*AGEHTG Trigger: ACCTGTATGCTCACCTGCCCATCCACACAGGCGAGA...GGTGGGCTCCACGCTGCTTTCCTCAAACCCAGAGGCTTCAGGAGACTTCACCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CCGGTGAAGTCTCCTGAAGCCTCTGGGTTTGAGGAAAGCAGCGTGGAGCCCACCTGCAGATTGGAGGCCTaGCTGAAGCCTTTTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: PVKSPEASGFEESSVEPTCRLEA*LKPFPH Trigger: GTGTGGAAAAGGCTTCAGTCAGGCCTCCAATCTGCA...GGTGGGCTCCACGCTGCTTTCCTCAAACCCAGAGGCTTCAGGAGACTTCACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CCA 90 bp | CCGGTGAAGTCTCCTGAAGCCTCTGGGTTTGAGGAAAGCAGCGTGGAGCCCACCTTATCCTCGGAGACCTaGAGAGGCTCTTCTGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PVKSPEASGFEESSVEPTLSSET*RGSSVP Trigger: CGGAACAGAAGAGCCTCTCCAGGTCTCCGAGGATAA...GGTGGGCTCCACGCTGCTTTCCTCAAACCCAGAGGCTTCAGGAGACTTCACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | GCTTCCTATGAGGAAGTGATGCTTCAGTCAACGGCGGTTCTGCCAATCACCAGCGTGTGGATGGGCAGGTaGGCATACAGGTGTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASYEEVMLQSTAVLPITSVWMGR*AYRCEL Trigger: GAGCTCACACCTGTATGCTCACCTGCCCATCCACAC...GCTGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGATGGGCCTGGAGGTGTaGCCTCTGTGTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RFCQSPAVVKALPAAFLEMGLEV*PLCEAL Trigger: AAGGGCTTCACACAGAGGTCACACCTCCAGGCCCAT...CTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CCGGTGAAGTCTCCTGAAGCCTCTGGGTTTGAGGAAAGCAGCGTGGAGCCCACCGTGGGTGTGAAGGTTTaGGCTACAGCTGAAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: PVKSPEASGFEESSVEPTVGVKV*ATAEAF Trigger: AAATGCTTCAGCTGTAGCTCAAACCTTCACACCCAC...GGTGGGCTCCACGCTGCTTTCCTCAAACCCAGAGGCTTCAGGAGACTTCACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGGTGTGGACCCTCTGGTaGGCAGTAAGTCCTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: RFCQSPAVVKALPAAFLEVWTLW*AVSPAL Trigger: GAGTGCAGGACTTACTGCTCACCAGAGGGTCCACAC...CTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGTCCTGCACTCCAGCTaGATTCCTTCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: FSQRRFCQSPAVVKALPAVLHSS*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCAGCTGGAGTGCAGGAC...TGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATCCATCTCCTCTTCACTaGAGACTACGGCCACATCCC | + |
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Preference number: 4 (lower is better) Translates to: SPAVVKALPAAFLETWMDPSPLH*RLRPHP Trigger: GGGATGTGGCCGTAGTCTTCAGTGAAGAGGAGATGG...ATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | GCTTCCTATGAGGAAGTGATGCTTCAGTCAACGGCGGTTCTGCCAATCACCAGCGTGTGCACTCGGCAGTaGATGTTGAGATCTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ASYEEVMLQSTAVLPITSVCTRQ*MLRSVL Trigger: AAGCACAGATCTCAACATTCACTGCCGAGTGCACAC...GCTGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGTGCTGGCCAGTTTCTTaGCATCATGGCCTGTCATAT | + |
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Preference number: 4 (lower is better) Translates to: RFCQSPAVVKALPAAFLECWPVS*HHGLSY Trigger: ATATGACAGGCCATGATGTCAAGAAACTGGCCAGCA...CTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGATAGGGAAGATGACTTaGTCACAGTCACCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RFCQSPAVVKALPAAFLEIGKMT*SQSPLL Trigger: CAGCAGTGGTGACTGTGATCAAGTCATCTTCCCTAT...CTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGGTTTGAGCTACAGCTaGAGCATTTGCCACAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSQRRFCQSPAVVKALPAGLSYS*SICHSL Trigger: GAGACTGTGGCAAATGCTTCAGCTGTAGCTCAAACC...TGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR GCA 90 bp | CGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGCACCCCAGTGAAAGGTaGCTTAATCCTGTTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RFCQSPAVVKALPAAFLEHPSER*LNPVES Trigger: TGACTCAACAGGATTAAGGCACCTTTCACTGGGGTG...CTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR GCA 90 bp | CGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGGATCACAGTCACCACTaGTGGGGACTTTGTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: RFCQSPAVVKALPAAFLEDHSHH*WGLCLF Trigger: AAAGAGACAAAGTCCCCAGCAGTGGTGACTGTGATC...CTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| 3UTR CAA 72 bp | TCGAATTTGAGCCTTACTTGCAGGGGCTTTTCTAACTaGCTCCAGGAATGGCTGGGTCCTGAGCCACATGCA | + |
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Preference number: 4 (lower is better) Translates to: SNLSLTCRGFSN*LQEWLGPEPHA Trigger: TGCATGTGGCTCAGGACCCAGCCATTCCTGGAGCAAGTTAGAAAAGCCCCTGCAAGTAAGGCTCAAATTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATCCCAGAGCCAACAGCTaGGACTTAGTTTTCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPAVVKALPAAFLETWMDPRANS*DLVFTR Trigger: TCTGGTGAAAACTAAGTCTCAGCTGTTGGCTCTGGG...ATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATGTGGTAGACCAGATGTaGTCTCTGACTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: SPAVVKALPAAFLETWMDVVDQM*SLTEAL Trigger: AAGGGCTTCAGTCAGAGATCACATCTGGTCTACCAC...ATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CCA 90 bp | TTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGACACTGCAGCAAAATaGCTTCTCTCCTGTATGGAC | + |
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Preference number: 4 (lower is better) Translates to: FSQRRFCQSPAVVKALPADTAAK*LLSCMD Trigger: GTCCATACAGGAGAGAAGCCATTTTGCTGCAGTGTC...TGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CATATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTAGTGTGGACCCTCTGGTaGGTGTGGAAGTGTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: HILRVATLELLYMVTVHLVWTLW*VWKCEA Trigger: GGCCTCACACTTCCACACTCACCAGAGGGTCCACAC...TAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATACCAGATGTGATCTCTaGCTGAAGCCCTTAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SPAVVKALPAAFLETWMDTRCDL*LKPLEQ Trigger: TTGCTCTAAGGGCTTCAGTCAGAGATCACATCTGGT...ATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTATAGGTGCGAGGCCTGACTaGATCGCTTCTGGCACGCAT | + |
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Preference number: 4 (lower is better) Translates to: YPEGGNLRTLVHGNSTFIGARPD*IASGTH Trigger: ATGCGTGCCAGAAGCGATTCAGTCAGGCCTCGCACC...TATAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CCA 90 bp | TTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGTACAGCGTTTCTCATaGTTCCATCTCTCACTAAAG | + |
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Preference number: 4 (lower is better) Translates to: FSQRRFCQSPAVVKALPAVQRFS*FHLSLK Trigger: CTTTAGTGAGAGATGGAACCATGAGAAACGCTGTAC...TGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CCA 90 bp | TTCAGTCAACGGCGGTTCTGCCAATCACCAGCTGTGGTTAAAGCACTTCCTGCAGTAGCGCTTTCTTCCTaGATGGACACTTTGTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FSQRRFCQSPAVVKALPAVALSS*MDTLLN Trigger: ATTCAACAAAGTGTCCATCCAGGAAGAAAGCGCTAC...TGCAGGAAGTGCTTTAACCACAGCTGGTGATTGGCAGAACCGCCGTTGACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTATAACCTTGTTTGGACTCTaGCTTCCCACTGCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: YPEGGNLRTLVHGNSTFITLFGL*LPTARR Trigger: CCTCCTGGCAGTGGGAAGTCAGAGTCCAAACAAGGT...TATAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | TATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTATAGATCTGTGCTTCGGCTaGAGCCCTTCCCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YPEGGNLRTLVHGNSTFIDLCFG*SPSHSC Trigger: ACAACTGTGGGAAGGGCTTCAGCCGAAGCACAGATC...TATAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CATATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTAGGTTCAAACTCCAGTTaGAGCGCTTCCCACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: HILRVATLELLYMVTVHLGSNSS*SASHTH Trigger: ATGTGTGTGGGAAGCGCTTCAACTGGAGTTTGAACC...TAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CCA 90 bp | TATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTATAATTCTCTCATGGGCCTaGAGGTGTGACCTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPEGGNLRTLVHGNSTFIILSWA*RCDLCV Trigger: CACACAGAGGTCACACCTCCAGGCCCATGAGAGAAT...TATAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CCA 90 bp | TATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTATACCTGTATGGACCCTCTaGTGGCTTTGGAAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YPEGGNLRTLVHGNSTFIPVWTL*WLWKLE Trigger: CTCAAGCTTCCAAAGCCACCAGAGGGTCCATACAGG...TATAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CATATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTAGTGAGCATACAGGTGTaGGCTCTGGTTAAAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HILRVATLELLYMVTVHLVSIQV*ALVKAL Trigger: AAGAGCTTTAACCAGAGCTCACACCTGTATGCTCAC...TAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR TCA 90 bp | CATATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTACCAGACAGAAATTCCTaGTTTTCGGTAATGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HILRVATLELLYMVTVHLPDRNS*FSVMLE Trigger: TTCCAGCATTACCGAAAATCAGGAATTTCTGTCTGG...TAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS TCA 90 bp | GGAGACCACAAGAGGTCAGAGGTGCCAGAGCTGTGGGATACCTGCTaGGGAAAGCTGCTAACAGGGAGTGGAACCAGCCCACTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GDHKRSEVPELWDTC*GKLLTGSGTSPLPG Trigger: TCCTGGCAGTGGGCTGGTTCCACTCCCTGTTAGCAGCTTTCCTCAGCAGGTATCCCACAGCTCTGGCACCTCTGACCTCTTGTGGTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS TCA 90 bp | AAGCCTCAGAGGCCAGGCGTGTGGGCGGACTATCCCTGTACTGTGTaGAGCTTGGGAGGTGAAGCCTGGATTGCCTTGGAGACCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KPQRPGVWADYPCTV*SLGGEAWIALETTR Trigger: TCTTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGGGATAGTCCGCCCACACGCCTGGCCTCTGAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CCA 90 bp | AGAGGCCAGGCGTGTGGGCGGACTATCCCTGTACTGTGTGAAGCTTaGGAGGTGAAGCCTGGATTGCCTTGGAGACCACAAGAGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGQACGRTIPVLCEA*EVKPGLPWRPQEVR Trigger: TCTGACCTCTTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGGGATAGTCCGCCCACACGCCTGGCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CCA 90 bp | ATCCCTGTACTGTGTGAAGCTTGGGAGGTGAAGCCTGGATTGCCTTaGAGACCACAAGAGGTCAGAGGTGCCAGAGCTGTGGGATACCTG | + |
|
Preference number: 5 (lower is better) Translates to: IPVLCEAWEVKPGLP*RPQEVRGARAVGYL Trigger: CAGGTATCCCACAGCTCTGGCACCTCTGACCTCTTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS GCA 90 bp | CTGGTAGGCCTTCTGTTCTGTGTAAACAGGAGACTGGGTGAGACATaGCATAGGGAAGATGACTTGATCACAGTCACCACTGCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LVGLLFCVNRRLGET*HREDDLITVTTAGD Trigger: GTCCCCAGCAGTGGTGACTGTGATCAAGTCATCTTCCCTATGGCATGTCTCACCCAGTCTCCTGTTTACACAGAACAGAAGGCCTACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CCA 90 bp | ATGTTTACTACAACATCTGGAGTGCTGGCCAGTTTCTTGACATCATaGCCTGTCATATGCCAGCATGGAAGCCACCCCAGTGAAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MFTTTSGVLASFLTS*PVICQHGSHPSERC Trigger: GCACCTTTCACTGGGGTGGCTTCCATGCTGGCATATGACAGGCCATGATGTCAAGAAACTGGCCAGCACTCCAGATGTTGTAGTAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS-3UTR CAA 90 bp | CAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATGCTGCATAGGGAAGATGACTaGATCACAGTCACCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLWLKHFLQPFWRLGWMLHREDD*ITVTTA Trigger: AGCAGTGGTGACTGTGATCAAGTCATCTTCCCTATG...CAGCATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS TCA 90 bp | TTCCTTGAATGTTTACTACAACATCTGGAGTGCTGGCCAGTTTCTTaGCATCATGGCCTGTCATATGCCAGCATGGAAGCCACCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLECLLQHLECWPVS*HHGLSYASMEATPV Trigger: CACTGGGGTGGCTTCCATGCTGGCATATGACAGGCCATGATGTCAAGAAACTGGCCAGCACTCCAGATGTTGTAGTAAACATTCAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS-3UTR CAA 90 bp | GCTTCCTATGAGGAAGTGATGCTTCAGTCAACGGCGGTTCTGCCAATCACCAGCGTGAGAACTCTTTCCTaGAATGTTTACTACAACATC | + |
|
Preference number: 5 (lower is better) Translates to: ASYEEVMLQSTAVLPITSVRTLS*NVYYNI Trigger: GATGTTGTAGTAAACATTCAAGGAAAGAGTTCTCAC...GCTGGTGATTGGCAGAACCGCCGTTGACTGAAGCATCACTTCCTCATAGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CAA 90 bp | TCACCAGCTGTGGTTAAAGCACTTCCTGCAGCCTTTCTGGAGACTTGGATGGATTGGATGGACACTTTGTaGAATGACACTGGAGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: SPAVVKALPAAFLETWMDWMDTL*NDTGGI Trigger: TATACCTCCAGTGTCATTCAACAAAGTGTCCATCCA...ATCCATCCAAGTCTCCAGAAAGGCTGCAGGAAGTGCTTTAACCACAGCTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
||
| CDS CCA 90 bp | CTCCAGGAAGTGAGAACTCTTTCCTTGAATGTTTACTACAACATCTaGAGTGCTGGCCAGTTTCTTGACATCATGGCCTGTCATATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQEVRTLSLNVYYNI*SAGQFLDIMACHMP Trigger: TGGCATATGACAGGCCATGATGTCAAGAAACTGGCCAGCACTCCAGATGTTGTAGTAAACATTCAAGGAAAGAGTTCTCACTTCCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS-3UTR CAA 90 bp | CATATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTAGAGTGTCCACCTTGTTaGGACTCTGACTTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: HILRVATLELLYMVTVHLECPPC*DSDFPL Trigger: CAGTGGGAAGTCAGAGTCCAAACAAGGTGGACACTC...TAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CAA 90 bp | CATATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTAAGCCTTGCCACACTCTaGACACCAGTAGCGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HILRVATLELLYMVTVHLSLATL*TPVALS Trigger: AGAAAGCGCTACTGGTGTCAAGAGTGTGGCAAGGCT...TAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
||
| CDS-3UTR CAA 90 bp | CATATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTAAGGTTCAAACTCCAGTaGAAGCGCTTCCCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: HILRVATLELLYMVTVHLRFKLQ*KRFPHT Trigger: TGTGTGTGGGAAGCGCTTCAACTGGAGTTTGAACCT...TAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS-3UTR CAA 90 bp | TATCCTGAGGGTGGCAACCTTAGAACTCTTGTACATGGTAACAGTACATTTATACCACTGCTGGGGACTTaGTCTCTTTTATGCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: YPEGGNLRTLVHGNSTFIPLLGT*SLLCSI Trigger: TATACTGCATAAAAGAGACAAAGTCCCCAGCAGTGG...TATAAATGTACTGTTACCATGTACAAGAGTTCTAAGGTTGCCACCCTCAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS TCA 72 bp | AGGCCAGGCGTGTGGGCGGACTATCCCTGTACTGTGTaGAGCTTGGGAGGTGAAGCCTGGATTGCCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPGVWADYPCTV*SLGGEAWIALE Trigger: CTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGGGATAGTCCGCCCACACGCCTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS TCA 72 bp | AGAGGACCTGCTGAGTCTCCTGACTGGGGCTGTCAATaGAGGCGTCTTGGCCTGTGTTGCACTGGTAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RGPAESPDWGCQ*RRLGLCCTGRP Trigger: AGGCCTACCAGTGCAACACAGGCCAAGACGCCTTCATTGACAGCCCCAGTCAGGAGACTCAGCAGGTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS GCA 72 bp | GCCTGGATTGCCTTGGAGACCACAAGAGGTCAGAGGTaGCAGAGCTGTGGGATACCTGCTGAGGAAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AWIALETTRGQR*QSCGIPAEESC Trigger: GCAGCTTTCCTCAGCAGGTATCCCACAGCTCTGGCACCTCTGACCTCTTGTGGTCTCCAAGGCAATCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CCA 72 bp | GTGAGACTCTCCAGACAGCCATTATCCTCGGAGACCTaGAGAGGCTCTTCTGTTCCGCCATGGCAGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VRLSRQPLSSET*RGSSVPPWQEE Trigger: CTCCTCCTGCCATGGCGGAACAGAAGAGCCTCTCCAGGTCTCCGAGGATAATGGCTGTCTGGAGAGTCTCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 90 bp | CGGACTATCCCTGTACTGTGTGAAGCTTGGGAGGTGAAGCCTGGATaGCCTTGGAGACCACAAGAGGTCAGAGGTGCCAGAGCTGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RTIPVLCEAWEVKPG*PWRPQEVRGARAVG Trigger: TCCCACAGCTCTGGCACCTCTGACCTCTTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGGGATAGTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS TCA 72 bp | AAGAGGTCAGAGGTGCCAGAGCTGTGGGATACCTGCTaGGGAAAGCTGCTAACAGGGAGTGGAACCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KRSEVPELWDTC*GKLLTGSGTSP Trigger: TGGGCTGGTTCCACTCCCTGTTAGCAGCTTTCCTCAGCAGGTATCCCACAGCTCTGGCACCTCTGACCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CCA 72 bp | GTGGGATACCTGCTGAGGAAAGCTGCTAACAGGGAGTaGAACCAGCCCACTGCCAGGAGGTTCAGGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGYLLRKAANRE*NQPTARRFRKF Trigger: GAACTTCCTGAACCTCCTGGCAGTGGGCTGGTTCCACTCCCTGTTAGCAGCTTTCCTCAGCAGGTATCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CCA 72 bp | CTGTGTGAAGCTTGGGAGGTGAAGCCTGGATTGCCTTaGAGACCACAAGAGGTCAGAGGTGCCAGAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LCEAWEVKPGLP*RPQEVRGARAV Trigger: CACAGCTCTGGCACCTCTGACCTCTTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CCA 72 bp | GCGTGTGGGCGGACTATCCCTGTACTGTGTGAAGCTTaGGAGGTGAAGCCTGGATTGCCTTGGAGACCACAA | + |
|
Preference number: 6 (lower is better) Translates to: ACGRTIPVLCEA*EVKPGLPWRPQ Trigger: TTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGGGATAGTCCGCCCACACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CAA 90 bp | GAGGACCTGCTGAGTCTCCTGACTGGGGCTGTCAATGAAGGCGTCTaGGCCTGTGTTGCACTGGTAGGCCTTCTGTTCTGTGTAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: EDLLSLLTGAVNEGV*ACVALVGLLFCVNR Trigger: CCTGTTTACACAGAACAGAAGGCCTACCAGTGCAACACAGGCCAAGACGCCTTCATTGACAGCCCCAGTCAGGAGACTCAGCAGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS TCA 72 bp | GGCGGACTATCCCTGTACTGTGTGAAGCTTGGGAGGTaGAGCCTGGATTGCCTTGGAGACCACAAGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GGLSLYCVKLGR*SLDCLGDHKRS Trigger: TGACCTCTTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGGGATAGTCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS CAA 72 bp | CTGAGTCTCCTGACTGGGGCTGTCAATGAAGGCGTCTaGGCCTGTGTTGCACTGGTAGGCCTTCTGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSLLTGAVNEGV*ACVALVGLLFC Trigger: ACAGAACAGAAGGCCTACCAGTGCAACACAGGCCAAGACGCCTTCATTGACAGCCCCAGTCAGGAGACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 72 bp | CCTGTACTGTGTGAAGCTTGGGAGGTGAAGCCTGGATaGCCTTGGAGACCACAAGAGGTCAGAGGTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PVLCEAWEVKPG*PWRPQEVRGAR Trigger: TCTGGCACCTCTGACCTCTTGTGGTCTCCAAGGCAATCCAGGCTTCACCTCCCAAGCTTCACACAGTACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS GCA 72 bp | GTGCTGGCCAGTTTCTTGACATCATGGCCTGTCATATaGCAGCATGGAAGCCACCCCAGTGAAAGGTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLASFLTSWPVI*QHGSHPSERCL Trigger: AAGGCACCTTTCACTGGGGTGGCTTCCATGCTGGCATATGACAGGCCATGATGTCAAGAAACTGGCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS TCA 72 bp | CCTGTTGAGTCAAGAGTGTCCACCTTGTTTGGACTCTaGCTTCCCACTGCCAGGAGGTTCAGGAAGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVESRVSTLFGL*LPTARRFRKFS Trigger: GGAGAACTTCCTGAACCTCCTGGCAGTGGGAAGTCAGAGTCCAAACAAGGTGGACACTCTTGACTCAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS CCA 72 bp | ACAACATCTGGAGTGCTGGCCAGTTTCTTGACATCATaGCCTGTCATATGCCAGCATGGAAGCCACCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TTSGVLASFLTS*PVICQHGSHPS Trigger: ACTGGGGTGGCTTCCATGCTGGCATATGACAGGCCATGATGTCAAGAAACTGGCCAGCACTCCAGATGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS TCA 72 bp | GGAGACTGGGTGAGACATGCCATAGGGAAGATGACTTaGTCACAGTCACCACTGCTGGGGACTTTGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GDWVRHAIGKMT*SQSPLLGTLSL Trigger: AAGAGACAAAGTCCCCAGCAGTGGTGACTGTGATCAAGTCATCTTCCCTATGGCATGTCTCACCCAGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS GCA 72 bp | GTCATATGCCAGCATGGAAGCCACCCCAGTGAAAGGTaGCTTAATCCTGTTGAGTCAAGAGTGTCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VICQHGSHPSER*LNPVESRVSTL Trigger: CAAGGTGGACACTCTTGACTCAACAGGATTAAGGCACCTTTCACTGGGGTGGCTTCCATGCTGGCATATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 72 bp | GCCTTAATCCTGTTGAGTCAAGAGTGTCCACCTTGTTaGGACTCTGACTTCCCACTGCCAGGAGGTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALILLSQECPPC*DSDFPLPGGSG Trigger: TCCTGAACCTCCTGGCAGTGGGAAGTCAGAGTCCAAACAAGGTGGACACTCTTGACTCAACAGGATTAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS CAA 90 bp | GACCTGGAGAGGCTCTTCTGTTCCGCCATGGCAGGAGGAGTGACATaGCTCCAGGAAGTGAGAACTCTTTCCTTGAATGTTTACTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: DLERLFCSAMAGGVT*LQEVRTLSLNVYYN Trigger: GTTGTAGTAAACATTCAAGGAAAGAGTTCTCACTTCCTGGAGCAATGTCACTCCTCCTGCCATGGCGGAACAGAAGAGCCTCTCCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 72 bp | AGGCTCTTCTGTTCCGCCATGGCAGGAGGAGTGACATaGCTCCAGGAAGTGAGAACTCTTTCCTTGAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: RLFCSAMAGGVT*LQEVRTLSLNV Trigger: AACATTCAAGGAAAGAGTTCTCACTTCCTGGAGCAATGTCACTCCTCCTGCCATGGCGGAACAGAAGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 90 bp | TATGCCAGCATGGAAGCCACCCCAGTGAAAGGTGCCTTAATCCTGTaGAGTCAAGAGTGTCCACCTTGTTTGGACTCTGACTTCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: YASMEATPVKGALIL*SQECPPCLDSDFLF Trigger: AAACAGGAAGTCAGAGTCCAAACAAGGTGGACACTCTTGACTCAACAGGATTAAGGCACCTTTCACTGGGGTGGCTTCCATGCTGGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205680.2 |
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| CDS TCA 72 bp | TGTTTACTACAACATCTGGAGTGCTGGCCAGTTTCTTaGCATCATGGCCTGTCATATGCCAGCATGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLLQHLECWPVS*HHGLSYASMEA Trigger: GGCTTCCATGCTGGCATATGACAGGCCATGATGTCAAGAAACTGGCCAGCACTCCAGATGTTGTAGTAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 90 bp | TGTGTAAACAGGAGACTGGGTGAGACATGCCATAGGGAAGATGACTaGATCACAGTCACCACTGCTGGGGACTTTGTCTCTTTTATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CVNRRLGETCHREDD*ITVTTAGDFVSFMQ Trigger: CTGCATAAAAGAGACAAAGTCCCCAGCAGTGGTGACTGTGATCAAGTCATCTTCCCTATGGCATGTCTCACCCAGTCTCCTGTTTACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 90 bp | ATGGCAGGAGGAGTGACATTGCTCCAGGAAGTGAGAACTCTTTCCTaGAATGTTTACTACAACATCTGGAGTGCTGGCCAGTTTCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: MAGGVTLLQEVRTLS*NVYYNIWSAGQFLD Trigger: GTCAAGAAACTGGCCAGCACTCCAGATGTTGTAGTAAACATTCAAGGAAAGAGTTCTCACTTCCTGGAGCAATGTCACTCCTCCTGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 90 bp | GCCACACTCTTGACACCAGTAGCGCTTTCTTCCTGGATGGACACTTaGTTGAATGACACTGGAGGTATAACTAGTGTCCTCATATGTACC | + |
|
Preference number: 6 (lower is better) Translates to: ATLLTPVALSSWMDT*LNDTGGITSVLICT Trigger: GGTACATATGAGGACACTAGTTATACCTCCAGTGTCATTCAACAAAGTGTCCATCCAGGAAGAAAGCGCTACTGGTGTCAAGAGTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS CAA 72 bp | GGAGTGACATTGCTCCAGGAAGTGAGAACTCTTTCCTaGAATGTTTACTACAACATCTGGAGTGCTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GVTLLQEVRTLS*NVYYNIWSAGQ Trigger: CTGGCCAGCACTCCAGATGTTGTAGTAAACATTCAAGGAAAGAGTTCTCACTTCCTGGAGCAATGTCACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 72 bp | TTGACACCAGTAGCGCTTTCTTCCTGGATGGACACTTaGTTGAATGACACTGGAGGTATAACTAGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LTPVALSSWMDT*LNDTGGITSVL Trigger: GAGGACACTAGTTATACCTCCAGTGTCATTCAACAAAGTGTCCATCCAGGAAGAAAGCGCTACTGGTGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS CAA 90 bp | ACACTCTTGACACCAGTAGCGCTTTCTTCCTGGATGGACACTTTGTaGAATGACACTGGAGGTATAACTAGTGTCCTCATATGTACCATG | + |
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Preference number: 6 (lower is better) Translates to: TLLTPVALSSWMDTL*NDTGGITSVLICTM Trigger: CATGGTACATATGAGGACACTAGTTATACCTCCAGTGTCATTCAACAAAGTGTCCATCCAGGAAGAAAGCGCTACTGGTGTCAAGAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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| CDS CCA 72 bp | GTGAGAACTCTTTCCTTGAATGTTTACTACAACATCTaGAGTGCTGGCCAGTTTCTTGACATCATGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VRTLSLNVYYNI*SAGQFLDIMAC Trigger: ACAGGCCATGATGTCAAGAAACTGGCCAGCACTCCAGATGTTGTAGTAAACATTCAAGGAAAGAGTTCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056549.9 ENSMUST00000205680.2 |
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| CDS CAA 72 bp | ACACCAGTAGCGCTTTCTTCCTGGATGGACACTTTGTaGAATGACACTGGAGGTATAACTAGTGTCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: TPVALSSWMDTL*NDTGGITSVLI Trigger: TATGAGGACACTAGTTATACCTCCAGTGTCATTCAACAAAGTGTCCATCCAGGAAGAAAGCGCTACTGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056549.9 |
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