Pregenerated sensors for ZFP229 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061544Ensembl transcript IDs: ENSMUST00000065871.14, ENSMUST00000182603.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCATGGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTaGATTAAAGGCCTGTGCAACTGCTACCTGGCTAAGAATTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: FHGDPPTSILPDPSA*IKGLCNCYLAKNCF Trigger: AAAACAATTCTTAGCCAGGTAGCAGTTGCACAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCCATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR TCA 90 bp | AAGAATTGTTCTCTCTCTCTCTCTATCTCTCTCTCTCTCCCTTTGTaGACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: KNCSLSLSISLSLPL*TLSLCECVCVLFVF Trigger: AAAGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAGAGAGAGAACAATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR TCA 90 bp | AAGAATTTCCAGAAGTCTAGTAGGAACAGGCTTTGCCAAATTCAATaGTATTTCTTTGGGGTCTCTAGAGAGGAATTTCTACTGTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: KNFQKSSRNRLCQIQ*YFFGVSREEFLLCS Trigger: ACTGCACAGTAGAAATTCCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTACTAGACTTCTGGAAATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGTGTACCAAGGAGCCCTaGCACATAGAGTGCTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: GDPPTSILPDPSAWIKGLCTKEP*HIECLK Trigger: TTTCAAGCACTCTATGTGTCAGGGCTCCTTGGTACA...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGCTTTGCCAAATTCAATaGTATTTCTTTGGGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GDPPTSILPDPSAWIKGLLCQIQ*YFFGVS Trigger: AGAGACCCCAAAGAAATATCATTGAATTTGGCAAAG...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTACCAAGGAGCCCTaGCACATAGAGTGCTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLCELSPFVNACTKEP*HIECLK Trigger: TTTCAAGCACTCTATGTGTCAGGGCTCCTTGGTACA...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGTTGGCATTAAGATTATaGAGACAATTGAGGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GDPPTSILPDPSAWIKGLLALRL*RQLRSL Trigger: AAGGGACCTCAATTGTCTGCATAATCTTAATGCCAA...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTCCTGACCCAAGTGCTTaGATTAAAGGCCTGTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LSLCELSPFVNACVCCLSPDPSA*IKGLCN Trigger: GTTGCACAGGCCTTTAATCCAAGCACTTGGGTCAGG...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGATGGGCTTTGATCTGTaGAGAATCTGTGTACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLCELSPFVNAMGFDL*RICVPR Trigger: CCTTGGTACACAGATTCTGCACAGATCAAAGCCCAT...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGAAAGGCCTGTGCAACTaGTACCTGGCTAAGAATTGT | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLCELSPFVNAKGLCN*YLAKNC Trigger: ACAATTCTTAGCCAGGTAGCAGTTGCACAGGCCTTT...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGATTAAAGCACTTTCTTaGGTTTTCCTTCAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GDPPTSILPDPSAWIKGLIKALS*VFLQEE Trigger: TTCTTCCTGAAGGAAAACCCAAGAAAGTGCTTTAAT...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGGTTCTCACCATCTTGTaGTTGACAGGTTTTTACTCC | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLCELSPFVNAVLTIL*LTGFYS Trigger: GGAGTAAAAACCTGTCAATCACAAGATGGTGAGAAC...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTATGGGCTTTGATCTGTaGAGAATCTGTGTACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LSLCELSPFVNACVCCLSMGFDL*RICVPR Trigger: CCTTGGTACACAGATTCTGCACAGATCAAAGCCCAT...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGATTTCTACTGTGCAGTaGGGCATGAATATAGCACAA | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLCELSPFVNAISTVQ*GMNIAQ Trigger: TTGTGCTATATTCATGCCTCACTGCACAGTAGAAAT...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTCACCATCTTGTGATTaGCAGGTTTTTACTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLCELSPFVNASPSCD*QVFTPE Trigger: TTCTGGAGTAAAAACCTGTCAATCACAAGATGGTGA...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTGTTCTCACCATCTTGTaGTTGACAGGTTTTTACTCC | + |
|
Preference number: 2 (lower is better) Translates to: LSLCELSPFVNACVCCLSVLTIL*LTGFYS Trigger: GGAGTAAAAACCTGTCAATCACAAGATGGTGAGAAC...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGAACAGGCTTTGCCAAATTCAATGATATTTCTTTGGGGTCTCTAGAGAGGAATGTTTTTCTGGAGTaGAGCCTGCAGTGGTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: VGTGFAKFNDISLGSLERNVFLE*SLQWCL Trigger: TAGGCACCACTGCAGGCTCCACTCCAGAAAAACATT...CCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTCTTTGCCAAATTCAATaGTATTTCTTTGGGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSLCELSPFVNACVCCLSLCQIQ*YFFGVS Trigger: AGAGACCCCAAAGAAATATCATTGAATTTGGCAAAG...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCAAGGGTGCCTTTATTAAAGCACTTTCTTGGGTTTTCCTTCAGGAAGAATAATGTTTTTCTGGAGTaGAGCCTGCAGTGGTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: KPRVPLLKHFLGFSFRKNNVFLE*SLQWCL Trigger: TAGGCACCACTGCAGGCTCCACTCCAGAAAAACATT...ATTCTTCCTGAAGGAAAACCCAAGAAAGTGCTTTAATAAAGGCACCCTTGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGAACAGGCTTTGCCAAATTCAATGATATTTCTTTGGGGTCTCTAGAGAGGATTTCTACTGTGCAGTaGGGCATGAATATAGCACAA | + |
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Preference number: 2 (lower is better) Translates to: VGTGFAKFNDISLGSLERISTVQ*GMNIAQ Trigger: TTGTGCTATATTCATGCCTCACTGCACAGTAGAAAT...CCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR TCA 90 bp | AAAACTCCAAGACAGTTTCTCCAAATATGGTGCTGTTCCCTAAAAGTACTTTCAAACTCTCTCCCTTTGTaGATGCGTGTGTGTGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: KTPRQFLQIWCCSLKVLSNSLPL*MRVCVV Trigger: AACAACACACACACGCATTCACAAAGGGAGAGAGTT...TGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCCAAGACAGTTTCTCCAAATATGGTGCTGTTCCCTAAAAGTACTTTCAAAAGGCCTGTGCAACTaGTACCTGGCTAAGAATTGT | + |
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Preference number: 2 (lower is better) Translates to: KTPRQFLQIWCCSLKVLSKGLCN*YLAKNC Trigger: ACAATTCTTAGCCAGGTAGCAGTTGCACAGGCCTTT...TGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTCTTTCTGTGTAGCTTaGGCTGTCCTGGAACTTACT | + |
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Preference number: 3 (lower is better) Translates to: LSLSLSLSLCELSPFVNASFCVA*AVLELT Trigger: AGTAAGTTCCAGGACAGCCAAAGCTACACAGAAAGA...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR TCA 72 bp | TGGTTATTGTCAGTCCCTACTAACTTTCGTGACTCCTaGCTTGGGTTCATCAGCTCTGAAGGAGCAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: WLLSVPTNFRDS*LGFISSEGAAI Trigger: AATTGCTGCTCCTTCAGAGCTGATGAACCCAAGTCAGGAGTCACGAAAGTTAGTAGGGACTGACAATAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTAGATTATGCAGACAATaGAGGTCCCTTGATGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: LSLCELSPFVNACVCCLSRLCRQ*RSLDGY Trigger: ATAACCATCAAGGGACCTCAATTGTCTGCATAATCT...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR GCA 72 bp | TATGGGAAAACTCCAAGACAGTTTCTCCAAATATGGTaGTGTTCCCTAAAAGTACTTTCATGCCTCTACCAG | + |
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Preference number: 3 (lower is better) Translates to: YGKTPRQFLQIW*CSLKVLSCLYQ Trigger: CTGGTAGAGGCATGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTTCCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR CCA 72 bp | GCTTATGGGAAAACTCCAAGACAGTTTCTCCAAATATaGTGCTGTTCCCTAAAAGTACTTTCATGCCTCTAC | + |
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Preference number: 3 (lower is better) Translates to: AYGKTPRQFLQI*CCSLKVLSCLY Trigger: GTAGAGGCATGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTTCCCATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR TCA 72 bp | ATTGGCATTAAGATTATGCAGACAATTGAGGTCCCTTaGTGGTTATTGTCAGTCCCTACTAACTTTCGTGAC | + |
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Preference number: 3 (lower is better) Translates to: IGIKIMQTIEVP*WLLSVPTNFRD Trigger: GTCACGAAAGTTAGTAGGGACTGACAATAACCATCAAGGGACCTCAATTGTCTGCATAATCTTAATGCCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR TCA 72 bp | CAGAAGTCTAGTAGGAACAGGCTTTGCCAAATTCAATaGTATTTCTTTGGGGTCTCTAGAGAGGAATTTCTA | + |
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Preference number: 3 (lower is better) Translates to: QKSSRNRLCQIQ*YFFGVSREEFL Trigger: TAGAAATTCCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTACTAGACTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | TCCCTACTAACTTTCGTGACTCCTGACTTGGGTTCATCAGCTCTGAAGGAGCAGCCTCCGGAGGATTCATaGAGCATTTTGCCAATTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLLTFVTPDLGSSALKEQPPEDS*SILPIS Trigger: TGAAATTGGCAAAATGCTTCATGAATCCTCCGGAGG...CTGCTCCTTCAGAGCTGATGAACCCAAGTCAGGAGTCACGAAAGTTAGTAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGCCCTTATGGATATTCTaGTGTTCTCTAAGAGAATTG | + |
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Preference number: 4 (lower is better) Translates to: GDPPTSILPDPSAWIKGLPLWIF*CSLREL Trigger: CAATTCTCTTAGAGAACATCAGAATATCCATAAGGG...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGGGTTCTTCTTCAGTGTaGATACTTTTATGTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: GDPPTSILPDPSAWIKGLGSSSV*ILLCLL Trigger: CAGTAGACATAAAAGTATGCACACTGAAGAAGAACC...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGCCAGCATGCATGTTCTaGTGTTCTCTAAGAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLCELSPFVNAPACMF*CSLRDE Trigger: CTCATCTCTTAGAGAACATCAGAACATGCATGCTGG...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CCA 90 bp | TCCCTACTAACTTTCGTGACTCCTGACTTGGGTTCATCAGCTCTGAAGGAGCAGATAGCTCTCTCTACCTaGTTTAGCCACCATCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLLTFVTPDLGSSALKEQIALST*FSHHLF Trigger: AAAGAGATGGTGGCTAAACCAGGTAGAGAGAGCTAT...CTGCTCCTTCAGAGCTGATGAACCCAAGTCAGGAGTCACGAAAGTTAGTAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTCCAGCATGCATGTTCTaGTGTTCTCTAAGAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LSLCELSPFVNACVCCLSPACMF*CSLRDE Trigger: CTCATCTCTTAGAGAACATCAGAACATGCATGCTGG...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGGAGTATTATTTGTTTTaGAAAGTATCCACCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLCELSPFVNAEYYLF*KVSTLR Trigger: CCGGAGGGTGGATACTTTGCAAAACAAATAATACTC...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTATAGCTCTCTCTACCTaGTTTAGCCACCATCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSLCELSPFVNACVCCLSIALST*FSHHLF Trigger: AAAGAGATGGTGGCTAAACCAGGTAGAGAGAGCTAT...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | GTAGGAACAGGCTTTGCCAAATTCAATGATATTTCTTTGGGGTCTCTAGAGAGGCCTCCGGAGGATTCATaGAGCATTTTGCCAATTTCA | + |
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Preference number: 4 (lower is better) Translates to: VGTGFAKFNDISLGSLERPPEDS*SILPIS Trigger: TGAAATTGGCAAAATGCTTCATGAATCCTCCGGAGG...CCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGCCCTTATGGATATTCTaGTGTTCTCTAAGAGAATTG | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLCELSPFVNAPLWIF*CSLREL Trigger: CAATTCTCTTAGAGAACATCAGAATATCCATAAGGG...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTAGTGATAGAAGGCCTTaGCACATTTTTCACAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LSLCELSPFVNACVCCLSSDRRP*HIFHKH Trigger: ATGCTTGTGAAAAATGTGGCAAGGCCTTCTATCACT...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGATGTCTTCTAAGGTTTaGCAGTGTGGTAAAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLCELSPFVNAMSSKV*QCGKGF Trigger: AAATCCTTTACCACACTGGCAAACCTTAGAAGACAT...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | GTAGGAACAGGCTTTGCCAAATTCAATGATATTTCTTTGGGGTCTCTAGAGAGGAAGTTGAGCAGTGTGTaGAGGATTTGTCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: VGTGFAKFNDISLGSLERKLSSV*RICHIH Trigger: GTGAATGTGACAAATCCTTCACACACTGCTCAACTT...CCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTGGTTCTTCTTCAGTGTaGATACTTTTATGTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: LSLCELSPFVNACVCCLSGSSSV*ILLCLL Trigger: CAGTAGACATAAAAGTATGCACACTGAAGAAGAACC...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGGCATGTTTTCTAAGTTaGGACAACATACAAAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLCELSPFVNAACFLS*DNIQKD Trigger: GTCTTTTTGTATGTTGTCGCAACTTAGAAAACATGC...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTATGTCTTCTAAGGTTTaGCAGTGTGGTAAAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: LSLCELSPFVNACVCCLSMSSKV*QCGKGF Trigger: AAATCCTTTACCACACTGGCAAACCTTAGAAGACAT...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR CAA 72 bp | GTAGGAACAGGCTTTGCCAAATTCAATGATATTTCTTaGGGGTCTCTAGAGAGGAATTTCTACTGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: VGTGFAKFNDIS*GSLERNFYCAV Trigger: CACTGCACAGTAGAAATTCCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | AAACCAAGGGTGCCTTTATTAAAGCACTTTCTTGGGTTTTCCTTCAGGAAGAATGTGTCTCCTACAAGTTaGGCAGTGTGTGAAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: KPRVPLLKHFLGFSFRKNVSPTS*AVCEGF Trigger: AAATCCTTCACACACTGCTCAACTTGTAGGAGACAC...ATTCTTCCTGAAGGAAAACCCAAGAAAGTGCTTTAATAAAGGCACCCTTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTGTATGGATTCTTTCATaGCTTTTAAGACAAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: LSLCELSPFVNACVCCLSVWILS*LLRQDN Trigger: GTTGTCTTGTCTTAAAAGCCATGAAAGAATCCATAC...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | AAAACTCCAAGACAGTTTCTCCAAATATGGTGCTGTTCCCTAAAAGTACTTTCAATGTGCTCTAAGAGATaGGCACCGGGTAAAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: KTPRQFLQIWCCSLKVLSMCSKR*APGKEL Trigger: AAGTTCTTTACCCGGTGCTCATCTCTTAGAGCACAT...TGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR TCA 90 bp | AAACCAAGGGTGCCTTTATTAAAGCACTTTCTTGGGTTTTCCTTCAGGAAGAATAAGTTGAGCAGTGTGTaGAGGATTTGTCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: KPRVPLLKHFLGFSFRKNKLSSV*RICHIH Trigger: GTGAATGTGACAAATCCTTCACACACTGCTCAACTT...ATTCTTCCTGAAGGAAAACCCAAGAAAGTGCTTTAATAAAGGCACCCTTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | AAACCAAGGGTGCCTTTATTAAAGCACTTTCTTGGGTTTTCCTTCAGGAAGAATAGTGATAGAAGGCCTTaGCACATTTTTCACAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: KPRVPLLKHFLGFSFRKNSDRRP*HIFHKH Trigger: ATGCTTGTGAAAAATGTGGCAAGGCCTTCTATCACT...ATTCTTCCTGAAGGAAAACCCAAGAAAGTGCTTTAATAAAGGCACCCTTGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| 3UTR CAA 72 bp | ATTTCTTACAAGGATATGACTTATGGAGTAGCTAAATaGCTAGAAGAAAGGCTCCCATACCTGATGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ISYKDMTYGVAK*LEERLPYLMAD Trigger: ATCTGCCATCAGGTATGGGAGCCTTTCTTCTAGCAATTTAGCTACTCCATAAGTCATATCCTTGTAAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR GCA 90 bp | AAAACTCCAAGACAGTTTCTCCAAATATGGTGCTGTTCCCTAAAAGTACTTTCAGAGTATTATTTGTTTTaGAAAGTATCCACCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: KTPRQFLQIWCCSLKVLSEYYLF*KVSTLR Trigger: CCGGAGGGTGGATACTTTGCAAAACAAATAATACTC...TGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CCA 90 bp | AAAACTCCAAGACAGTTTCTCCAAATATGGTGCTGTTCCCTAAAAGTACTTTCAGTATGGATTCTTTCATaGCTTTTAAGACAAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: KTPRQFLQIWCCSLKVLSVWILS*LLRQDN Trigger: GTTGTCTTGTCTTAAAAGCCATGAAAGAATCCATAC...TGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGCACATTTGTAAGGCTTaGCAGCATGAGTGCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: GDPPTSILPDPSAWIKGLHICKA*QHECSG Trigger: ACCAGAGCACTCATGCTGCAAAGCCTTACAAATGTG...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGTTCACTGGACTTCCATaGTATATCCACATGCTCATA | + |
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Preference number: 5 (lower is better) Translates to: GDPPTSILPDPSAWIKGLFTGLP*YIHMLI Trigger: TATGAGCATGTGGATATACAATGGAAGTCCAGTGAA...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | GGAGATCCACCCACCTCTATCCTCCCTGACCCAAGTGCTTGGATTAAAGGCCTGGGCATGTTTTCTAAGTaGCGACAACATACAAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: GDPPTSILPDPSAWIKGLGMFSK*RQHTKR Trigger: TCTTTTTGTATGTTGTCGCAACTTAGAAAACATGCC...CAGGCCTTTAATCCAAGCACTTGGGTCAGGGAGGATAGAGGTGGGTGGATCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | TCCCTACTAACTTTCGTGACTCCTGACTTGGGTTCATCAGCTCTGAAGGAGCAGAACCACCTAAAAGCCTaGTCACATTCTGTGCATATC | + |
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Preference number: 5 (lower is better) Translates to: SLLTFVTPDLGSSALKEQNHLKA*SHSVHI Trigger: GATATGCACAGAATGTGACAAGGCTTTTAGGTGGTT...CTGCTCCTTCAGAGCTGATGAACCCAAGTCAGGAGTCACGAAAGTTAGTAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTCACATTTGTAAGGCTTaGCAGCATGAGTGCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: LSLCELSPFVNACVCCLSHICKA*QHECSG Trigger: ACCAGAGCACTCATGCTGCAAAGCCTTACAAATGTG...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | TCCCTACTAACTTTCGTGACTCCTGACTTGGGTTCATCAGCTCTGAAGGAGCAGTTCACTGGACTTCCATaGTATATCCACATGCTCATA | + |
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Preference number: 5 (lower is better) Translates to: SLLTFVTPDLGSSALKEQFTGLP*YIHMLI Trigger: TATGAGCATGTGGATATACAATGGAAGTCCAGTGAA...CTGCTCCTTCAGAGCTGATGAACCCAAGTCAGGAGTCACGAAAGTTAGTAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGCACCGGGTAAAGAACTaGTCACATTTCCAACATTTG | + |
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Preference number: 5 (lower is better) Translates to: LSLSLSLSLCELSPFVNAHRVKN*SHFQHL Trigger: CAAATGTTGGAAATGTGACAAGTTCTTTACCCGGTG...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTAACCACCTAAAAGCCTaGTCACATTCTGTGCATATC | + |
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Preference number: 5 (lower is better) Translates to: LSLCELSPFVNACVCCLSNHLKA*SHSVHI Trigger: GATATGCACAGAATGTGACAAGGCTTTTAGGTGGTT...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTATCTCTCTCTCTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGGATATTCTTCGAGTCTaGATAGAAGACAATCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSLSLSLCELSPFVNADILRV*IEDNLR Trigger: TCTGAGATTGTCTTCTATCAAGACTCGAAGAATATC...CGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAGAGAGAGAGATAGAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS CCA 90 bp | GAAGACAATCTCAGATTCACTGCACATTCGATAGCTCTCTCTACCTaGTTTAGCCACCATCTCTTTTATCTTCACGTTCCAGGGTATATA | + |
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Preference number: 5 (lower is better) Translates to: EDNLRFTAHSIALST*FSHHLFYLHVPGYI Trigger: TATATACCCTGGAACGTGAAGATAAAAGAGATGGTGGCTAAACCAGGTAGAGAGAGCTATCGAATGTGCAGTGAATCTGAGATTGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | CTCTCCCTTTGTGAACTCTCTCCCTTTGTGAATGCGTGTGTGTGTTGTTTGTCTGATATTCTTCGAGTCTaGATAGAAGACAATCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLCELSPFVNACVCCLSDILRV*IEDNLR Trigger: TCTGAGATTGTCTTCTATCAAGACTCGAAGAATATC...AGACAAACAACACACACACGCATTCACAAAGGGAGAGAGTTCACAAAGGGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | GTAGGAACAGGCTTTGCCAAATTCAATGATATTTCTTTGGGGTCTCTAGAGAGGCACCGGGTAAAGAACTaGTCACATTTCCAACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGTGFAKFNDISLGSLERHRVKN*SHFQHL Trigger: CAAATGTTGGAAATGTGACAAGTTCTTTACCCGGTG...CCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | AAACCAAGGGTGCCTTTATTAAAGCACTTTCTTGGGTTTTCCTTCAGGAAGAATGGAGTATTATTTGTTTaGCAAAGTATCCACCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: KPRVPLLKHFLGFSFRKNGVLFV*QSIHPP Trigger: CGGAGGGTGGATACTTTGCAAAACAAATAATACTCC...ATTCTTCCTGAAGGAAAACCCAAGAAAGTGCTTTAATAAAGGCACCCTTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | GTAGGAACAGGCTTTGCCAAATTCAATGATATTTCTTTGGGGTCTCTAGAGAGGTTAGCTGTACAAGTTTaGGGAAAGAGCCAAAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VGTGFAKFNDISLGSLERLAVQV*GKSQKF Trigger: AAACTTTTGGCTCTTTCCCAAAACTTGTACAGCTAA...CCTCTCTAGAGACCCCAAAGAAATATCATTGAATTTGGCAAAGCCTGTTCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS TCA 90 bp | GGAGTATTATTTGTTTTGCAAAGTATCCACCCTCCGGAGGATTCATaGAGCATTTTGCCAATTTCATTACATTCACTGGACTTCCATTGT | + |
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Preference number: 5 (lower is better) Translates to: GVLFVLQSIHPPEDS*SILPISLHSLDFHC Trigger: ACAATGGAAGTCCAGTGAATGTAATGAAATTGGCAAAATGCTTCATGAATCCTCCGGAGGGTGGATACTTTGCAAAACAAATAATACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS GCA 90 bp | TTGTTTTGCAAAGTATCCACCCTCCGGAGGATTCATGAAGCATTTTaGCAATTTCATTACATTCACTGGACTTCCATTGTATATCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LFCKVSTLRRIHEAF*QFHYIHWTSIVYPH Trigger: ATGTGGATATACAATGGAAGTCCAGTGAATGTAATGAAATTGGCAAAATGCTTCATGAATCCTCCGGAGGGTGGATACTTTGCAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS-3UTR CAA 90 bp | AAAACTCCAAGACAGTTTCTCCAAATATGGTGCTGTTCCCTAAAAGTACTTTCATTAGCTGTACAAGTTTaGGGAAAGAGCCAAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTPRQFLQIWCCSLKVLSLAVQV*GKSQKF Trigger: AAACTTTTGGCTCTTTCCCAAAACTTGTACAGCTAA...TGAAAGTACTTTTAGGGAACAGCACCATATTTGGAGAAACTGTCTTGGAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS CCA 72 bp | CTCAGATTCACTGCACATTCGATAGCTCTCTCTACCTaGTTTAGCCACCATCTCTTTTATCTTCACGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRFTAHSIALST*FSHHLFYLHVP Trigger: TGGAACGTGAAGATAAAAGAGATGGTGGCTAAACCAGGTAGAGAGAGCTATCGAATGTGCAGTGAATCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS GCA 72 bp | AAAGTATCCACCCTCCGGAGGATTCATGAAGCATTTTaGCAATTTCATTACATTCACTGGACTTCCATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KVSTLRRIHEAF*QFHYIHWTSIV Trigger: TACAATGGAAGTCCAGTGAATGTAATGAAATTGGCAAAATGCTTCATGAATCCTCCGGAGGGTGGATACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS CAA 90 bp | CTTCCATTGTATATCCACATGCTCATAGATGATATTCTTCGAGTCTaGATAGAAGACAATCTCAGATTCACTGCACATTCGATAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPLYIHMLIDDILRV*IEDNLRFTAHSIAL Trigger: GAGAGCTATCGAATGTGCAGTGAATCTGAGATTGTCTTCTATCAAGACTCGAAGAATATCATCTATGAGCATGTGGATATACAATGGAAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS CAA 72 bp | TATATCCACATGCTCATAGATGATATTCTTCGAGTCTaGATAGAAGACAATCTCAGATTCACTGCACATTCG | + |
|
Preference number: 6 (lower is better) Translates to: YIHMLIDDILRV*IEDNLRFTAHS Trigger: CGAATGTGCAGTGAATCTGAGATTGTCTTCTATCAAGACTCGAAGAATATCATCTATGAGCATGTGGATATA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS CAA 90 bp | TGTGGTTATCAAATCTGTATTTGTTGCAGATTTCTGGAGTATTATTaGTTTTGCAAAGTATCCACCCTCCGGAGGATTCATGAAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: CGYQICICCRFLEYY*FCKVSTLRRIHEAF Trigger: AAATGCTTCATGAATCCTCCGGAGGGTGGATACTTTGCAAAACAAATAATACTCCAGAAATCTGCAACAAATACAGATTTGATAACCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS CCA 72 bp | CTACTGAGGTTTGTTGATTCAATATATGCATCCTTGTaGTTATCAAATCTGTATTTGTTGCAGATTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLRFVDSIYASL*LSNLYLLQISG Trigger: TCCAGAAATCTGCAACAAATACAGATTTGATAACCACAAGGATGCATATATTGAATCAACAAACCTCAGTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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| CDS CAA 72 bp | CATTTTGCCAATTTCATTACATTCACTGGACTTCCATaGTATATCCACATGCTCATAGATGATATTCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: HFANFITFTGLP*YIHMLIDDILR Trigger: TCGAAGAATATCATCTATGAGCATGTGGATATACAATGGAAGTCCAGTGAATGTAATGAAATTGGCAAAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065871.14 ENSMUST00000182603.2 |
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