Pregenerated sensors for ZFP217 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052056Ensembl transcript IDs: ENSMUST00000063710.13, ENSMUST00000109155.8
Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TGGGAAACAAACAATGGAGAGGCCCAGGCGTCTTCTCTCCCTGCCTaGCAGGAGGGCTCAGCCAGCAGCAACTCACCCAGACTCAAGGTG | + |
Preference number: 1 (lower is better) Translates to: WETNNGEAQASSLPA*QEGSASSNSPRLKV Trigger: CACCTTGAGTCTGGGTGAGTTGCTGCTGGCTGAGCCCTCCTGGCAGGCAGGGAGAGAAGACGCCTGGGCCTCTCCATTGTTTGTTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR TCA 90 bp | GCTAGTTGGTGGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTaGGGAAATCACCCTGGGAAACAAACAATGGAGAGGCCCAGGCGT | + |
Preference number: 1 (lower is better) Translates to: ASWWLSSLHLELPVH*GNHPGKQTMERPRR Trigger: ACGCCTGGGCCTCTCCATTGTTTGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCCACCAACTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR GCA 90 bp | GGTACAAAGGTTAACAGAACGTTAGAGAATGTAGTGTTCCTTCTCTaGTCCTCTCAGGTCTATGTACAGTTCAGTCACAGCTTGTTCAGT | + |
Preference number: 1 (lower is better) Translates to: GTKVNRTLENVVFLL*SSQVYVQFSHSLFS Trigger: ACTGAACAAGCTGTGACTGAACTGTACATAGACCTGAGAGGAGCAGAGAAGGAACACTACATTCTCTAACGTTCTGTTAACCTTTGTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR GCA 90 bp | CCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTaGTTCCAAGCACGCAATTCACACAAGGAGATATGGCAACTCTCC | + |
Preference number: 1 (lower is better) Translates to: PNTNDFPKLSTPFKN*FQARNSHKEIWQLS Trigger: GGAGAGTTGCCATATCTCCTTGTGTGAATTGCGTGCTTGGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGGCTCCCCATGGAGCCTaGCTCTCTGTGACATCGGCC | + |
Preference number: 2 (lower is better) Translates to: SLCTYGSACGREQGLVYMAPHGA*LSVTSA Trigger: GGCCGATGTCACAGAGAGCCAGGCTCCATGGGGAGC...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACACCCCAGGCAGCAAGCTaGGGCTCCAGGACACCTGTA | + |
Preference number: 2 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTPQAAS*GSRTPV Trigger: TACAGGTGTCCTGGAGCCCCAGCTTGCTGCCTGGGG...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACGGCGTCTTCTCTCCCTaGCTGCCAGGAGGGCTCAGC | + |
Preference number: 2 (lower is better) Translates to: KRSSYKSRHISTQVSIQHGVFSP*LPGGLS Trigger: GCTGAGCCCTCCTGGCAGGCAGGGAGAGAAGACGCC...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAGTAGTGTTCCTTCTCTaGTCCTCTCAGGTCTATGTA | + |
Preference number: 2 (lower is better) Translates to: VLPPSRAACALRKSPWETVVFLL*SSQVYV Trigger: TACATAGACCTGAGAGGAGCAGAGAAGGAACACTAC...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR TCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCCAGGTTAGTGCCTGCTaGCCTCAAGATGCACAGCAC | + |
Preference number: 2 (lower is better) Translates to: WQLSETPNLPKEKNLDGSQVSAC*PQDAQH Trigger: GTGCTGTGCATCTTGAGGTCAGCAGGCACTAACCTG...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTGTGGAAGTGTGTACTTaGATCCAGGGACCTTTTCCC | + |
Preference number: 2 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGVEVCT*IQGPFP Trigger: GGGAAAAGGTCCCTGGATGCAAGTACACACTTCCAC...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAACTCCCTTTAAAAATTaGTTCCAAGCACGCAATTCA | + |
Preference number: 2 (lower is better) Translates to: VLPPSRAACALRKSPWETTPFKN*FQARNS Trigger: TGAATTGCGTGCTTGGAAGCAATTTTTAAAGGGAGT...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTCTAGCTCTACCAGCTaGAGTAAAAGGTGCCAGGTT | + |
Preference number: 2 (lower is better) Translates to: SLCTYGSACGREQGLVYMSSSTS*SKRCQV Trigger: AACCTGGCACCTTTTACTCCAGCTGGTAGAGCTAGA...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR TCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAACCACCCTACCCCAAATaGTTTCTTTTCAGCAGCGCT | + |
Preference number: 2 (lower is better) Translates to: SRERASCTLTAFRQRWCQPPYPK*FLFSSA Trigger: AGCGCTGCTGAAAAGAAATCATTTGGGGTAGGGTGG...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAAGTGGAAGTGTGTACTTaGATCCAGGGACCTTTTCCC | + |
Preference number: 2 (lower is better) Translates to: SRERASCTLTAFRQRWCQVEVCT*IQGPFP Trigger: GGGAAAAGGTCCCTGGATGCAAGTACACACTTCCAC...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTACAGTTACCTGAGGTaGAAGCTTTACAACATCCCC | + |
Preference number: 2 (lower is better) Translates to: SLCTYGSACGREQGLVYMYSYLR*KLYNIP Trigger: GGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTA...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCGCTCCCCATGGAGCCTaGCTCTCTGTGACATCGGCC | + |
Preference number: 2 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCAPHGA*LSVTSA Trigger: GGCCGATGTCACAGAGAGCCAGGCTCCATGGGGAGC...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGCTGGGAAACAAACAATaGAGAGGCCCAGGCGTCTTC | + |
Preference number: 2 (lower is better) Translates to: LRKQSSLCTYGSACGREQLGNKQ*RGPGVF Trigger: GAAGACGCCTGGGCCTCTCCATTGTTTGTTTCCCAG...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGCAATGTATGATTCCGTaGAAGTGTGTACTTGCATCC | + |
Preference number: 2 (lower is better) Translates to: SLCTYGSACGREQGLVYMQCMIP*KCVLAS Trigger: GGATGCAAGTACACACTTCCACGGAATCATACATTG...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAATCTAGCTCTACCAGCTaGAGTAAAAGGTGCCAGGTT | + |
Preference number: 2 (lower is better) Translates to: SRERASCTLTAFRQRWCQSSSTS*SKRCQV Trigger: AACCTGGCACCTTTTACTCCAGCTGGTAGAGCTAGA...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR TCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGTGCACAGCACATCACTaGGTGTCAACATTTCGTTCC | + |
Preference number: 2 (lower is better) Translates to: LRKQSSLCTYGSACGREQCTAHH*VSTFRS Trigger: GGAACGAAATGTTGACACTCAGTGATGTGCTGTGCA...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR TCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCCAGGTTAGTGCCTGCTaGCCTCAAGATGCACAGCAC | + |
Preference number: 2 (lower is better) Translates to: LQIQTISLSFPLPLKIASQVSAC*PQDAQH Trigger: GTGCTGTGCATCTTGAGGTCAGCAGGCACTAACCTG...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACGTAGTGTTCCTTCTCTaGTCCTCTCAGGTCTATGTA | + |
Preference number: 2 (lower is better) Translates to: KRSSYKSRHISTQVSIQHVVFLL*SSQVYV Trigger: TACATAGACCTGAGAGGAGCAGAGAAGGAACACTAC...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTCCCACTCGTTTTTATTaGTATTTGGTACAAAGGTTA | + |
Preference number: 2 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGPTRFY*YLVQRL Trigger: TAACCTTTGTACCAAATAGCAATAAAAACGAGTGGG...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR GCA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACAACTCCCTTTAAAAATTaGTTCCAAGCACGCAATTCA | + |
Preference number: 2 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTTPFKN*FQARNS Trigger: TGAATTGCGTGCTTGGAAGCAATTTTTAAAGGGAGT...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACCAATGTATGATTCCGTaGAAGTGTGTACTTGCATCC | + |
Preference number: 2 (lower is better) Translates to: KRSSYKSRHISTQVSIQHQCMIP*KCVLAS Trigger: GGATGCAAGTACACACTTCCACGGAATCATACATTG...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR GCA 72 bp | AACAATGGAGAGGCCCAGGCGTCTTCTCTCCCTGCCTaGCAGGAGGGCTCAGCCAGCAGCAACTCACCCAGA | + |
Preference number: 3 (lower is better) Translates to: NNGEAQASSLPA*QEGSASSNSPR Trigger: TCTGGGTGAGTTGCTGCTGGCTGAGCCCTCCTGGCAGGCAGGGAGAGAAGACGCCTGGGCCTCTCCATTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR GCA 72 bp | AACAAACAATGGAGAGGCCCAGGCGTCTTCTCTCCCTaGCTGCCAGGAGGGCTCAGCCAGCAGCAACTCACC | + |
Preference number: 3 (lower is better) Translates to: NKQWRGPGVFSP*LPGGLSQQQLT Trigger: GGTGAGTTGCTGCTGGCTGAGCCCTCCTGGCAGGCAGGGAGAGAAGACGCCTGGGCCTCTCCATTGTTTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR TCA 72 bp | GAACTTAGATGGCTCCCCATGGAGCCTGGCTCTCTGTaGCATCGGCCACTCTACAGAGGCAGCTTCTCTGTA | + |
Preference number: 3 (lower is better) Translates to: ELRWLPMEPGSL*HRPLYRGSFSV Trigger: TACAGAGAAGCTGCCTCTGTAGAGTGGCCGATGTCACAGAGAGCCAGGCTCCATGGGGAGCCATCTAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR TCA 72 bp | TGGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTaGGGAAATCACCCTGGGAAACAAACAATGGAGAGG | + |
Preference number: 3 (lower is better) Translates to: WLSSLHLELPVH*GNHPGKQTMER Trigger: CCTCTCCATTGTTTGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR GCA 72 bp | GTTGGTGGCTGTCCTCCCTCCATCTCGAGCTGCCTGTaGACTGAGGAAATCACCCTGGGAAACAAACAATGG | + |
Preference number: 3 (lower is better) Translates to: VGGCPPSISSCL*TEEITLGNKQW Trigger: CCATTGTTTGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCCACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR CCA 72 bp | CCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTaGGAAACAAACAATGGAGAGGCCCAGGCGTCTTCT | + |
Preference number: 3 (lower is better) Translates to: PSRAACALRKSP*ETNNGEAQASS Trigger: AGAAGACGCCTGGGCCTCTCCATTGTTTGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR GCA 72 bp | CAAGTTTACCACGTCGGTATTTACAGTTACCTGAGGTaGAAGCTTTACAACATCCCCTGCCCACCCCACCCC | + |
Preference number: 3 (lower is better) Translates to: QVYHVGIYSYLR*KLYNIPCPPHP Trigger: GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAATACCGACGTGGTAAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR CCA 72 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTaGAAGTGTGTACTTGCATCCAGGGACCTTTTCCCC | + |
Preference number: 3 (lower is better) Translates to: VRSQKMNQCMIP*KCVLASRDLFP Trigger: GGGGAAAAGGTCCCTGGATGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CAA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTCAGTTCAGTCACAGCTaGTTCAGTAGCTATTGTGCG | + |
Preference number: 3 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGQFSHS*FSSYCA Trigger: CGCACAATAGCTACTGAACAAGCTGTGACTGAACTG...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CAA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCCAGTTCAGTCACAGCTaGTTCAGTAGCTATTGTGCG | + |
Preference number: 3 (lower is better) Translates to: WQLSETPNLPKEKNLDGSQFSHS*FSSYCA Trigger: CGCACAATAGCTACTGAACAAGCTGTGACTGAACTG...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CAA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACATCCCACTCGTTTTTATaGCTATTTGGTACAAAGGTT | + |
Preference number: 3 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTSHSFL*LFGTKV Trigger: AACCTTTGTACCAAATAGCAATAAAAACGAGTGGGA...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR-3UTR CAA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGTCCCACTCGTTTTTATaGCTATTTGGTACAAAGGTT | + |
Preference number: 3 (lower is better) Translates to: LRKQSSLCTYGSACGREQSHSFL*LFGTKV Trigger: AACCTTTGTACCAAATAGCAATAAAAACGAGTGGGA...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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3UTR TCA 72 bp | ATCACTGAGTGTCAACATTTCGTTCCATCAGCAATGTaGAGACAAACAATAGACTCAGTGAGAATATGCTTT | + |
Preference number: 3 (lower is better) Translates to: ITECQHFVPSAM*RQTIDSVRICF Trigger: AAAGCATATTCTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACACTCAGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAGGAAACGGGCTTTGTaGGGCAGCACAGGCGGTGGG | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGRKRAL*GSTGGG Trigger: CCCACCGCCTGTGCTGCCCCACAAAGCCCGTTTCCT...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAGAGCAGGTCCCAGGCTaGCTTGCATCCACAGCCATG | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGEQVPG*LASTAM Trigger: CATGGCTGTGGATGCAAGGCAGCCTGGGACCTGCTC...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGACAACCCCCTCTAGTCTaGAGACAGGGCTGCTGGCCT | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGQPPLV*RQGCWP Trigger: AGGCCAGCAGCCCTGTCTGCAGACTAGAGGGGGTTG...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGACTTTCCTTCAAGGGCTaGGCTGCCTCCTGCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGLSFKG*AASCVS Trigger: GGACACGCAGGAGGCAGCCCAGCCCTTGAAGGAAAG...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACACTTCCAGAGTGGTGCTaGGGTCTGGGGAGCAGGTCC | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETLPEWC*GLGSRS Trigger: GGACCTGCTCCCCAGACCTCAGCACCACTCTGGAAG...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAGGCATCTCCTTAAGCTaGTTGGCAGGTGGGCTTCCC | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGGISLS*LAGGLP Trigger: GGGAAGCCCACCTGCCAAGCAGCTTAAGGAGATGCC...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAAGGAAACGGGCTTTGTaGGGCAGCACAGGCGGTGGG | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETRKRAL*GSTGGG Trigger: CCCACCGCCTGTGCTGCCCCACAAAGCCCGTTTCCT...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR TCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAACAGGGCTGCTGGCCTaGGGCTCCCCTGCTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETTGLLA*GSPAFF Trigger: AAAGAAAGCAGGGGAGCCTCAGGCCAGCAGCCCTGT...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACATTGGCCTTGGGCTTGTaGAGGCCAGACAAGGGAGGG | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETLALGL*RPDKGG Trigger: CCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAA...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAACTCTGACTGCTaGTGCCTGGTGGCACTGGTG | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGNNSDC*CLVALV Trigger: CACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTT...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAGTTGCTGTGTGCTGGTaGGAGAACACTCTGGAAGAC | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGVAVCW*ENTLED Trigger: GTCTTCCAGAGTGTTCTCTCACCAGCACACAGCAAC...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAGAAGCTTGCTCCTGGTaGCAGACTTGCCATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGEACSW*QTCHCV Trigger: CACACAATGGCAAGTCTGGCACCAGGAGCAAGCTTC...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAGTCTCTCCCTTGCTGTaGCCATGGGCCGTCAACCTT | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETVSPLL*PWAVNL Trigger: AAGGTTGACGGCCCATGGGCACAGCAAGGGAGAGAC...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGCTTCAAGGGCTGGGCTaGCTCCTGCGTGTCCCACGG | + |
Preference number: 4 (lower is better) Translates to: CTYGSACGREQGLVYMFLLQGLG*LLRVPR Trigger: CCGTGGGACACGCAGGAGGCAGCCCAGCCCTTGAAG...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCCAATCCAGGGGCATGTaGCCCTCTGCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPQSRGM*PSATAM Trigger: CATGGCCGTGGCAGAGGGCCACATGCCCCTGGATTG...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTCTGGCTCGCAGAGGGTaGGCCGGTGCTGCAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGLARRG*AGAAAA Trigger: TGCTGCTGCAGCACCGGCCCACCCTCTGCGAGCCAG...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCAGTGGTGCTGAGGTCTaGGGAGCAGGTCCCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPSGAEV*GAGPRL Trigger: CAGCCTGGGACCTGCTCCCCAGACCTCAGCACCACT...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAGGCTGCTTGTCTTTGTaGTGTCTCTCCAAGTGGTAC | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGGCLSL*CLSKWY Trigger: GTACCACTTGGAGAGACATCACAAAGACAAGCAGCC...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAGCCACTGGGAATGTCTaGCCACACACATCACAGCTC | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETATGNV*PHTSQL Trigger: GAGCTGTGATGTGTGTGGGCAGACATTCCCAGTGGC...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCATGCTCCCAGGGGCGTaGGGCTGGACCACTTCATTG | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPMLPGA*GWTTSL Trigger: CAATGAAGTGGTCCAGCCGCACGCCCCTGGGAGCAT...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACACTTGCTCAAAGAGATTaGAGGACAGGCGTGGAGCGG | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETLAQRD*RTGVER Trigger: CCGCTCCACGCCTGTCCTGCAATCTCTTTGAGCAAG...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGCTTCAAGGGCTGGGCTaGCTCCTGCGTGTCCCACGG | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMLQGLG*LLRVPR Trigger: CCGTGGGACACGCAGGAGGCAGCCCAGCCCTTGAAG...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACATTGCATCCACAGCCATaGTGGGTGACAGGGCATCAG | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETLHPQP*WVTGHQ Trigger: CTGATGCCCTGTCACCCACCATGGCTGTGGATGCAA...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGGCCATGCTCTTCTCCTaGGCAGCTCGGAAGGGGACT | + |
Preference number: 4 (lower is better) Translates to: CTYGSACGREQGLVYMFLAMLFS*AARKGT Trigger: AGTCCCCTTCCGAGCTGCTCAGGAGAAGAGCATGGC...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGCTTCCAGAGTGGTGCTaGGGTCTGGGGAGCAGGTCC | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMLPEWC*GLGSRS Trigger: GGACCTGCTCCCCAGACCTCAGCACCACTCTGGAAG...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGACTCAAGTTCAAAAACTaGAGCAACTCTTCCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGLKFKN*SNSSLG Trigger: CCCGAGGGAAGAGTTGCTGCAGTTTTTGAACTTGAG...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCGGTAGCCAACTGCCATaGCTGGTAGGTGGTGAACGG | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPGSQLP*LVGGER Trigger: CCGTTCACCACCTACCAGGCATGGCAGTTGGCTACC...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCGTCTCTCCCTTGCTGTaGCCATGGGCCGTCAACCTT | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPVSPLL*PWAVNL Trigger: AAGGTTGACGGCCCATGGGCACAGCAAGGGAGAGAC...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAGAGGCTCTGCTTATTTaGGAAGAGGAAGCCGCAGAC | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETEALLI*EEEAAD Trigger: GTCTGCGGCTTCCTCTTCCCAAATAAGCAGAGCCTC...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTGCAGACAGGGCTGCTaGCCTGAGGCTCCCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMCRQGC*PEAPLL Trigger: AAGCAGGGGAGCCTCAGGCCAGCAGCCCTGTCTGCA...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCGTCTGCAGACAGGGCTaGTGGCCTGAGGCTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSVCRQG*WPEAPL Trigger: CAGGGGAGCCTCAGGCCAGCAGCCCTGTCTGCAGAC...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCGCTCAAAGCCCCTTCTaGCATTGGTCCCTGCATGCT | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPAQSPF*HWSLHA Trigger: AGCATGCAGGGACCAATGGCAGAAGGGGCTTTGAGC...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGAGGCAGTCTTGGCCTTaGGCTTGTGCAGGCCAGACA | + |
Preference number: 4 (lower is better) Translates to: CTYGSACGREQGLVYMFLRQSWP*ACAGQT Trigger: TGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCT...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGTTTGGGAAACAACTCTaGCTGCTGCTGCCTGGTGGC | + |
Preference number: 4 (lower is better) Translates to: CTYGSACGREQGLVYMFLFGKQL*LLLPGG Trigger: GCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAA...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAAAGCCAACACACTGGGTaGCTCCACCTCCCCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQSQHTG*LHLPRA Trigger: AGCCCTGGGGAGGTGGAGTCACCCAGTGTGTTGGCT...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGACTCAGCACTATCAGCTaGATGTTTATGGAAATCCTG | + |
Preference number: 4 (lower is better) Translates to: GCPPSISSCLCTEEITLGLSTIS*MFMEIL Trigger: CAGGATTTCCATAAACATGCAGCTGATAGTGCTGAG...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACATTGGCCTTGGGCTTGTaGAGGCCAGACAAGGGAGGG | + |
Preference number: 4 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTLALGL*RPDKGG Trigger: CCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAA...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCGCCTGGTGGCACTGGTaGCCCCAGCATTGGGTTGTG | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSAWWHW*PQHWVV Trigger: CACAACCCAATGCTGGGGGCACCAGTGCCACCAGGC...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCACTCAGAACAGTGCGTaGGCTTCTCCTTGCTACTGG | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPTQNSA*ASPCYW Trigger: CCAGTAGCAAGGAGAAGCCCACGCACTGTTCTGAGT...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTGTGAGAAGGCAGTCTTaGCCTTGGGCTTGTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGVRRQS*PWACAG Trigger: GCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCAC...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTGGAAGTGTGTACTTGCACACAGCCATGGTGGGTaGCAGGGCATCAGTCCTCCT | + |
Preference number: 4 (lower is better) Translates to: VRSQKMNQCMIPWKCVLAHSHGG*QGISPP Trigger: AGGAGGACTGATGCCCTGTCACCCACCATGGCTGTG...TGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGGTTGCTGTGTGCTGGTaGGAGAACACTCTGGAAGAC | + |
Preference number: 4 (lower is better) Translates to: CTYGSACGREQGLVYMFLVAVCW*ENTLED Trigger: GTCTTCCAGAGTGTTCTCTCACCAGCACACAGCAAC...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTGCTGTTGTCTGGTCCTaGAGTCTGGGGTGCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGAVVWS*SLGCFA Trigger: AGCAAAGCACCCCAGACTTCAGGACCAGACAACAGC...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACAGCCAACACACTGGGTaGCTCCACCTCCCCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHSQHTG*LHLPRA Trigger: AGCCCTGGGGAGGTGGAGTCACCCAGTGTGTTGGCT...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGGGAAACAACTCTGACTaGTGCTGCCTGGTGGCACTG | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMGNNSD*CCLVAL Trigger: CAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCC...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTCTGCCATTGGTCCCTaGATGCTCTGTGTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMSAIGP*MLCVQG Trigger: TCCCTGGACACAGAGCATGCAGGGACCAATGGCAGA...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACCAATCCAGGGGCATGTaGCCCTCTGCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHQSRGM*PSATAM Trigger: CATGGCCGTGGCAGAGGGCCACATGCCCCTGGATTG...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGAGTGGTGCTGAGGTCTaGGGAGCAGGTCCCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQSGAEV*GAGPRL Trigger: CAGCCTGGGACCTGCTCCCCAGACCTCAGCACCACT...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGTGCAGACAGGGCTGCTaGCCTGAGGCTCCCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQCRQGC*PEAPLL Trigger: AAGCAGGGGAGCCTCAGGCCAGCAGCCCTGTCTGCA...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACAATTGCAGGACAGGCGTaGAGCGGCCCAAGGGATAGA | + |
Preference number: 4 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTIAGQA*SGPRDR Trigger: TCTATCCCTTGGGCCGCTCCACGCCTGTCCTGCAAT...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGAGGGGCAGGCAATGCTaGGGATCAGACACTTGCTCA | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMRGRQC*GSDTCS Trigger: TGAGCAAGTGTCTGATCCCCAGCATTGCCTGCCCCT...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAACTTTCCTTCAAGGGCTaGGCTGCCTCCTGCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQLSFKG*AASCVS Trigger: GGACACGCAGGAGGCAGCCCAGCCCTTGAAGGAAAG...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAACTCTCCATGCCTTGCTaGAGCTTGCTCCTGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQLSMPC*SLLLVP Trigger: TGGCACCAGGAGCAAGCTTCAGCAAGGCATGGAGAG...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACCTGCCGAGCCTTCTCTaGGTGCAGGGACTTCGAGTG | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHLPSLL*VQGLRV Trigger: CACTCGAAGTCCCTGCACTCAGAGAAGGCTCGGCAG...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAACCTGGCTGCAGAACATaGAATCCAGGGGCATGTGGC | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKPGCRT*NPGACG Trigger: GCCACATGCCCCTGGATTGCATGTTCTGCAGCCAGG...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACATGCTCCCAGGGGCGTaGGGCTGGACCACTTCATTG | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHMLPGA*GWTTSL Trigger: CAATGAAGTGGTCCAGCCGCACGCCCCTGGGAGCAT...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAAGGCATCTCCTTAAGCTaGTTGGCAGGTGGGCTTCCC | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQGISLS*LAGGLP Trigger: GGGAAGCCCACCTGCCAAGCAGCTTAAGGAGATGCC...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCTACTTGGGGCTAAAGTaGTGTTGTCTGGTCCTGAAG | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPYLGLK*CCLVLK Trigger: CTTCAGGACCAGACAACAGCACTTTAGCCCCAAGTA...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGAACTCTGACTGCTGCTaGCTGGTGGCACTGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQNSDCC*LVALVP Trigger: GGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTT...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCCTGGCTCGCAGAGGGTaGGCCGGTGCTGCAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASLARRG*AGAAAA Trigger: TGCTGCTGCAGCACCGGCCCACCCTCTGCGAGCCAG...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCGCTTCTCCTTGCTACTaGACAACTTGGGGTCACTAT | + |
Preference number: 4 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPASPCY*TTWGHY Trigger: ATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGC...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTCTCAGAGATGTCTTCTaGGCTGCGGCATACTCACAG | + |
Preference number: 4 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGLRDVF*AAAYSQ Trigger: CTGTGAGTATGCCGCAGCCCAGAAGACATCTCTGAG...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGCTCAGAGATGTCTTCTaGGCTGCGGCATACTCACAG | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMLRDVF*AAAYSQ Trigger: CTGTGAGTATGCCGCAGCCCAGAAGACATCTCTGAG...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGCATCCTGCGGCTCCTaGCTCCGGCCTTCACTTTTG | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQASCGS*LRPSLL Trigger: CAAAAGTGAAGGCCGGAGCCAGGAGCCGCAGGATGC...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAAAGGCAGTCTTGGCCTTaGGCTTGTGCAGGCCAGACA | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKRQSWP*ACAGQT Trigger: TGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCT...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGATGCTCCTGACCACATaGTACTTGGGGAGCTCAAAG | + |
Preference number: 4 (lower is better) Translates to: CTYGSACGREQGLVYMFLMLLTT*YLGSSK Trigger: CTTTGAGCTCCCCAAGTACCATGTGGTCAGGAGCAT...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAATGCCTTGCTGAAGCTTaGTCCTGGTGCCAGACTTGC | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQCLAEA*SWCQTC Trigger: GCAAGTCTGGCACCAGGAGCAAGCTTCAGCAAGGCA...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACGGTAGCCAACTGCCATaGCTGGTAGGTGGTGAACGG | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHGSQLP*LVGGER Trigger: CCGTTCACCACCTACCAGGCATGGCAGTTGGCTACC...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCGCGTGGGCTTCTCCTTaGTACTGGACAACTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSAWASP*YWTTWG Trigger: ACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGC...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGCTGTGCACCCTCGAGTaGAGGACGAGCTGGTGGTAT | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQLCTLE*RTSWWY Trigger: ATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAG...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGGCCTGGTGGCACTGGTaGCCCCAGCATTGGGTTGTG | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSEAWWHW*PQHWVV Trigger: CACAACCCAATGCTGGGGGCACCAGTGCCACCAGGC...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCAACAACTCTGACTGCTaGTGCCTGGTGGCACTGGTG | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSNNSDC*CLVALV Trigger: CACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTT...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAACCATTGGTCCCTGCATaGTCTGTGTCCAGGGACACC | + |
Preference number: 4 (lower is better) Translates to: RPTAPTRFYCYLVQRLTEPLVPA*SVSRDT Trigger: GGTGTCCCTGGACACAGAGCATGCAGGGACCAATGG...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAAGCTCAAAGCCCCTTCTaGCATTGGTCCCTGCATGCT | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKAQSPF*HWSLHA Trigger: AGCATGCAGGGACCAATGGCAGAAGGGGCTTTGAGC...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACATACCTGCAGTTGATCTaGGTCTCAAGTTCAAAAACT | + |
Preference number: 4 (lower is better) Translates to: VLPPSRAACALRKSPWETYLQLI*VSSSKT Trigger: AGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTA...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGGGCTTCTCTTTGTCTTaGGAGAGACCTGGACAACTG | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMGFSLS*ERPGQL Trigger: CAGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCC...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAATTCAAAGGCCTGTCCTaGCAGTCAGCACCGGGCTTA | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQFKGLS*QSAPGL Trigger: TAAGCCCGGTGCTGACTGCCAGGACAGGCCTTTGAA...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACATTGCAGGACAGGCGTaGAGCGGCCCAAGGGATAGA | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHIAGQA*SGPRDR Trigger: TCTATCCCTTGGGCCGCTCCACGCCTGTCCTGCAAT...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAAAGGGGCAGGCAATGCTaGGGATCAGACACTTGCTCA | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKRGRQC*GSDTCS Trigger: TGAGCAAGTGTCTGATCCCCAGCATTGCCTGCCCCT...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACGTGAGAAGGCAGTCTTaGCCTTGGGCTTGTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHVRRQS*PWACAG Trigger: GCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCAC...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGCTGTTGTCTGGTCCTaGAGTCTGGGGTGCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQAVVWS*SLGCFA Trigger: AGCAAAGCACCCCAGACTTCAGGACCAGACAACAGC...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAATTTGGGAAACAACTCTaGCTGCTGCTGCCTGGTGGC | + |
Preference number: 4 (lower is better) Translates to: RPTAPTRFYCYLVQRLTEFGKQL*LLLPGG Trigger: GCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAA...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGCTGTTAGATAGGTGCTaGTGTGACACAGGCCTCTTT | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMLLDRC*CDTGLF Trigger: AAAGAGGCCTGTGTCACATCAGCACCTATCTAACAG...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAAGAGAGAAGACCTGGCTaGAGAACATGCAATCCAGGG | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQERRPG*RTCNPG Trigger: CCCTGGATTGCATGTTCTGCAGCCAGGTCTTCTCTC...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAAGAAGCTTGCTCCTGGTaGCAGACTTGCCATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKEACSW*QTCHCV Trigger: CACACAATGGCAAGTCTGGCACCAGGAGCAAGCTTC...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACTGCCTTGCTGAAGCTTaGTCCTGGTGCCAGACTTGC | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHCLAEA*SWCQTC Trigger: GCAAGTCTGGCACCAGGAGCAAGCTTCAGCAAGGCA...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACGGCCTGAGGCTCCCCTaGTTTCTTTCTCTGCATGTC | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHGLRLP*FLSLHV Trigger: GACATGCAGAGAAAGAAAGCAGGGGAGCCTCAGGCC...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCGTCTGCAGACAGGGCTaGTGGCCTGAGGCTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCVCRQG*WPEAPL Trigger: CAGGGGAGCCTCAGGCCAGCAGCCCTGTCTGCAGAC...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACCTTGCTCAAAGAGATTaGAGGACAGGCGTGGAGCGG | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHLAQRD*RTGVER Trigger: CCGCTCCACGCCTGTCCTGCAATCTCTTTGAGCAAG...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAACTCACTGTACTCTGCTaGGGCACTGCCAGAATTCCG | + |
Preference number: 4 (lower is better) Translates to: RPTAPTRFYCYLVQRLTELTVLC*GTARIP Trigger: CGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAG...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGCTCACTGTACTCTGCTaGGGCACTGCCAGAATTCCG | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQLTVLC*GTARIP Trigger: CGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAG...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAAACTCTTCTCCAATGCTaGCTCTGTTGGCTCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQTLLQC*LCWLQS Trigger: GCTCTGGAGCCAACAGAGCCAGCATTGGAGAAGAGT...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGTTGCATCCACAGCCATaGTGGGTGACAGGGCATCAG | + |
Preference number: 4 (lower is better) Translates to: LRKQSSLCTYGSACGREQLHPQP*WVTGHQ Trigger: CTGATGCCCTGTCACCCACCATGGCTGTGGATGCAA...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCCCTTGCTGTGCTCAATaGGGCTCTGCTTATTTGGGA | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSPCCAQ*GSAYLG Trigger: TCCCAAATAAGCAGAGCCTCATTGAGCACAGCAAGG...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR TCA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTTGTACTACCTGCAGTTaGTCTGGGTCTCAAGTTCAA | + |
Preference number: 4 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGCTTCS*SGSQVQ Trigger: TTGAACTTGAGACCCAGATCAACTGCAGGTAGTACA...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR TCA 90 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTGGAAGTGTGTACTTGCAGGCTGCTTGTCTTTGTaGTGTCTCTCCAAGTGGTAC | + |
Preference number: 4 (lower is better) Translates to: VRSQKMNQCMIPWKCVLAGCLSL*CLSKWY Trigger: GTACCACTTGGAGAGACATCACAAAGACAAGCAGCC...TGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR TCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCACAGGGCTGCTGGCCTaGGGCTCCCCTGCTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASTGLLA*GSPAFF Trigger: AAAGAAAGCAGGGGAGCCTCAGGCCAGCAGCCCTGT...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACGGTCAAGCTGAGGTATaGAGGTCATGGGCTTCACTG | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHGQAEV*RSWASL Trigger: CAGTGAAGCCCATGACCTGCATACCTCAGCTTGACC...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGCTGTGCACCCTCGAGTaGAGGACGAGCTGGTGGTAT | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSELCTLE*RTSWWY Trigger: ATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAG...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCGAGCAGGTCCCAGGCTaGCTTGCATCCACAGCCATG | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASEQVPG*LASTAM Trigger: CATGGCTGTGGATGCAAGGCAGCCTGGGACCTGCTC...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACAAGATGTCTTCTGGGCTaGGGCATACTCACAGAATTC | + |
Preference number: 4 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTRCLLG*GILTEF Trigger: GAATTCTGTGAGTATGCCGCAGCCCAGAAGACATCT...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCCAACCCCCTCTAGTCTaGAGACAGGGCTGCTGGCCT | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASQPPLV*RQGCWP Trigger: AGGCCAGCAGCCCTGTCTGCAGACTAGAGGGGGTTG...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCAACTCTGACTGCTGCTaGCTGGTGGCACTGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASNSDCC*LVALVP Trigger: GGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTT...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGCCATTGGTCCCTGCATaGTCTGTGTCCAGGGACACC | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSEPLVPA*SVSRDT Trigger: GGTGTCCCTGGACACAGAGCATGCAGGGACCAATGG...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCGGCTTCTCTTTGTCTTaGGAGAGACCTGGACAACTG | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSGFSLS*ERPGQL Trigger: CAGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCC...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCGCATCCTGCGGCTCCTaGCTCCGGCCTTCACTTTTG | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASASCGS*LRPSLL Trigger: CAAAAGTGAAGGCCGGAGCCAGGAGCCGCAGGATGC...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAAGGTGAGAGAACACTCTaGAAGACAGAAGGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKGERTL*KTEGIS Trigger: GGAGATGCCTTCTGTCTTCCAGAGTGTTCTCTCACC...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCATGCTCCTGACCACATaGTACTTGGGGAGCTCAAAG | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSMLLTT*YLGSSK Trigger: CTTTGAGCTCCCCAAGTACCATGTGGTCAGGAGCAT...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR TCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCGCCATGCTCTTCTCCTaGGCAGCTCGGAAGGGGACT | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCAMLFS*AARKGT Trigger: AGTCCCCTTCCGAGCTGCTCAGGAGAAGAGCATGGC...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCCTCTCCATGCCTTGCTaGAGCTTGCTCCTGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASLSMPC*SLLLVP Trigger: TGGCACCAGGAGCAAGCTTCAGCAAGGCATGGAGAG...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR TCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCCACAGCCATGGTGGGTaGCAGGGCATCAGTCCTCCT | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCHSHGG*QGISPP Trigger: AGGAGGACTGATGCCCTGTCACCCACCATGGCTGTG...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCCCTGGCTGCAGAACATaGAATCCAGGGGCATGTGGC | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASPGCRT*NPGACG Trigger: GCCACATGCCCCTGGATTGCATGTTCTGCAGCCAGG...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAACTCAAGTTCAAAAACTaGAGCAACTCTTCCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQLKFKN*SNSSLG Trigger: CCCGAGGGAAGAGTTGCTGCAGTTTTTGAACTTGAG...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGGCGTGGGCTTCTCCTTaGTACTGGACAACTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSEAWASP*YWTTWG Trigger: ACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGC...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAAAGATGTCTTCTGGGCTaGGGCATACTCACAGAATTC | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKRCLLG*GILTEF Trigger: GAATTCTGTGAGTATGCCGCAGCCCAGAAGACATCT...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTTAAATTTTTGGTCTaGGCACTGTCAGCAGCCGTT | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMFKFLV*ALSAAV Trigger: AACGGCTGCTGACAGTGCGCAGACCAAAAATTTAAA...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGGGCCTGAGGCTCCCCTaGTTTCTTTCTCTGCATGTC | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSEGLRLP*FLSLHV Trigger: GACATGCAGAGAAAGAAAGCAGGGGAGCCTCAGGCC...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGGGAAACAACTCTGACTaGTGCTGCCTGGTGGCACTG | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSEGNNSD*CCLVAL Trigger: CAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCC...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGTCTGCCATTGGTCCCTaGATGCTCTGTGTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSESAIGP*MLCVQG Trigger: TCCCTGGACACAGAGCATGCAGGGACCAATGGCAGA...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAACAATGCTGGCTCTGTTaGCTCCAGAGCTTTATCAAG | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKQCWLC*LQSFIK Trigger: CTTGATAAAGCTCTGGAGCCAACAGAGCCAGCATTG...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCAACATCAAAAGCCACTaGGAATGTCTGCCCACACAC | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSNIKSH*ECLPTH Trigger: GTGTGTGGGCAGACATTCCCAGTGGCTTTTGATGTT...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGTTATGCTTCTTCATGTaGCTCTCAACATCAAAAGCC | + |
Preference number: 4 (lower is better) Translates to: CTYGSACGREQGLVYMFLLCFFM*LSTSKA Trigger: GGCTTTTGATGTTGAGAGCCACATGAAGAAGCATAA...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAAGGTGAGAGAACACTCTaGAAGACAGAAGGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: RPTAPTRFYCYLVQRLTEGERTL*KTEGIS Trigger: GGAGATGCCTTCTGTCTTCCAGAGTGTTCTCTCACC...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTGGAAGTGTGTACTTGCATGTACTACCTGCAGTTaGTCTGGGTCTCAAGTTCAA | + |
Preference number: 4 (lower is better) Translates to: VRSQKMNQCMIPWKCVLACTTCS*SGSQVQ Trigger: TTGAACTTGAGACCCAGATCAACTGCAGGTAGTACA...TGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGGCTTCCTTCTTGGCCTaGCTCTTTCACCTCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSEASFLA*LFHLFL Trigger: CAGGAAGAGGTGAAAGAGTCAGGCCAAGAAGGAAGC...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGGAGAGAAGACCTGGCTaGAGAACATGCAATCCAGGG | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSEERRPG*RTCNPG Trigger: CCCTGGATTGCATGTTCTGCAGCCAGGTCTTCTCTC...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTGGAAGTGTGTACTTGCAAATCCTGAGTATCGTTaGTGTGTGCTGGTGAGAGAA | + |
Preference number: 4 (lower is better) Translates to: VRSQKMNQCMIPWKCVLANPEYR*CVLVRE Trigger: TTCTCTCACCAGCACACAGCAACGATACTCAGGATT...TGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACAACATCAAAAGCCACTaGGAATGTCTGCCCACACAC | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHNIKSH*ECLPTH Trigger: GTGTGTGGGCAGACATTCCCAGTGGCTTTTGATGTT...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTATGCTTCTTCATGTaGCTCTCAACATCAAAAGCC | + |
Preference number: 4 (lower is better) Translates to: SLCTYGSACGREQGLVYMLCFFM*LSTSKA Trigger: GGCTTTTGATGTTGAGAGCCACATGAAGAAGCATAA...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
3UTR CAA 72 bp | TGCTCCTCTCAGGTCTATGTACAGTTCAGTCACAGCTaGTTCAGTAGCTATTGTGCGCTCTCAGAAGATGAA | + |
Preference number: 4 (lower is better) Translates to: CSSQVYVQFSHS*FSSYCALSEDE Trigger: TTCATCTTCTGAGAGCGCACAATAGCTACTGAACAAGCTGTGACTGAACTGTACATAGACCTGAGAGGAGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAATTTAAATTTTTGGTCTaGGCACTGTCAGCAGCCGTT | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQFKFLV*ALSAAV Trigger: AACGGCTGCTGACAGTGCGCAGACCAAAAATTTAAA...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR GCA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACAATCCTGAGTATCGTTaGTGTGTGCTGGTGAGAGAA | + |
Preference number: 4 (lower is better) Translates to: KRSSYKSRHISTQVSIQHNPEYR*CVLVRE Trigger: TTCTCTCACCAGCACACAGCAACGATACTCAGGATT...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCACTCTTCTCCAATGCTaGCTCTGTTGGCTCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASTLLQC*LCWLQS Trigger: GCTCTGGAGCCAACAGAGCCAGCATTGGAGAAGAGT...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCGAGGCTCTGCTTATTTaGGAAGAGGAAGCCGCAGAC | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASEALLI*EEEAAD Trigger: GTCTGCGGCTTCCTCTTCCCAAATAAGCAGAGCCTC...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAATGCTTTTACTTGTTTTaGACTTTCCAGACCCTTCCG | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKCFYLF*TFQTLP Trigger: CGGAAGGGTCTGGAAAGTCCAAAACAAGTAAAAGCA...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCTGCTTTTACTTGTTTTaGACTTTCCAGACCCTTCCG | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSCFYLF*TFQTLP Trigger: CGGAAGGGTCTGGAAAGTCCAAAACAAGTAAAAGCA...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CCA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCACTCAGAACAGTGCGTaGGCTTCTCCTTGCTACTGG | + |
Preference number: 4 (lower is better) Translates to: LQIQTISLSFPLPLKIASTQNSA*ASPCYW Trigger: CCAGTAGCAAGGAGAAGCCCACGCACTGTTCTGAGT...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR TCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCGCTTCCTTCTTGGCCTaGCTCTTTCACCTCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCASFLA*LFHLFL Trigger: CAGGAAGAGGTGAAAGAGTCAGGCCAAGAAGGAAGC...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGCTGTTAGATAGGTGCTaGTGTGACACAGGCCTCTTT | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSELLDRC*CDTGLF Trigger: AAAGAGGCCTGTGTCACATCAGCACCTATCTAACAG...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCGGTCAAGCTGAGGTATaGAGGTCATGGGCTTCACTG | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCGQAEV*RSWASL Trigger: CAGTGAAGCCCATGACCTGCATACCTCAGCTTGACC...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAATTGAACGGAAAAACTTaGCACAGTAACTACACTCTC | + |
Preference number: 4 (lower is better) Translates to: SRERASCTLTAFRQRWCQLNGKT*HSNYTL Trigger: GAGAGTGTAGTTACTGTGGCAAGTTTTTCCGTTCAA...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCATCTCTTTAAATTTTTaGTCTGCGCACTGTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: WQLSETPNLPKEKNLDGSISLNF*SAHCQQ Trigger: CTGCTGACAGTGCGCAGACCAAAAATTTAAAGAGAT...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | GACTCAAGGTGTCCACACCTCCAATACCAGACACAGCAAGACTCCAAATACAAAATTGAGGTAATAGTTTaGACGGAAAAACTTGCCACA | + |
Preference number: 4 (lower is better) Translates to: DSRCPHLQYQTQQDSKYKIEVIV*TEKLAT Trigger: TGTGGCAAGTTTTTCCGTTCAAACTATTACCTCAAT...TTTGTATTTGGAGTCTTGCTGTGTCTGGTATTGGAGGTGTGGACACCTTGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGTCATTTTTATCCAAATaGAGCCCGTCAGGGAGTCCA | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSESFLSK*SPSGSP Trigger: TGGACTCCCTGACGGGCTCCATTTGGATAAAAATGA...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAAATCTCTTTAAATTTTTaGTCTGCGCACTGTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: RPTAPTRFYCYLVQRLTEISLNF*SAHCQQ Trigger: CTGCTGACAGTGCGCAGACCAAAAATTTAAAGAGAT...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTACTTGGGGCTAAAGTaGTGTTGTCTGGTCCTGAAG | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCYLGLK*CCLVLK Trigger: CTTCAGGACCAGACAACAGCACTTTAGCCCCAAGTA...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCGCTTCTCCTTGCTACTaGACAACTTGGGGTCACTAT | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCASPCY*TTWGHY Trigger: ATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGC...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGTTGAACGGAAAAACTTaGCACAGTAACTACACTCTC | + |
Preference number: 4 (lower is better) Translates to: VSTFRSISNVKTNNRLSELNGKT*HSNYTL Trigger: GAGAGTGTAGTTACTGTGGCAAGTTTTTCCGTTCAA...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR GCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCCTCAGCACTATCAGCTaGATGTTTATGGAAATCCTG | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCLSTIS*MFMEIL Trigger: CAGGATTTCCATAAACATGCAGCTGATAGTGCTGAG...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTACCTGCAGTTGATCTaGGTCTCAAGTTCAAAAACT | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCYLQLI*VSSSKT Trigger: AGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTA...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR TCA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCATTGAGGTAATAGTTTaGACGGAAAAACTTGCCACA | + |
Preference number: 4 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCIEVIV*TEKLAT Trigger: TGTGGCAAGTTTTTCCGTTCAAACTATTACCTCAAT...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | GGTGCTTTGCTTGGCCCCGAGGCCCCCTGCCGAGCCTTCTCTGAGTaGAGGGACTTCGAGTGTGGTGAGAAGGCAGTCTTGGCCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: GALLGPEAPCRAFSE*RDFECGEKAVLALG Trigger: GCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAAGTCCCTGCACTCAGAGAAGGCTCGGCAGGGGGCCTCGGGGCCAAGCAAAGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | ACACTGGGTGACTCCACCTCCCCAGGGCTCAGGAAACGGGCTTTGTaGGGCAGCACAGGCGGTGGGCGCACACACTCTGGTGGTAGCAAG | + |
Preference number: 5 (lower is better) Translates to: TLGDSTSPGLRKRAL*GSTGGGRTHSGGSK Trigger: CTTGCTACCACCAGAGTGTGTGCGCCCACCGCCTGTGCTGCCCCACAAAGCCCGTTTCCTGAGCCCTGGGGAGGTGGAGTCACCCAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | TGCAGAACATGCAATCCAGGGGCATGTGGCCCTCTGCCACGGCCATaGTCTTCTCCTGAGCAGCTCGGAAGGGGACTGCCACCGGCCCTT | + |
Preference number: 5 (lower is better) Translates to: CRTCNPGACGPLPRP*SSPEQLGRGLPPAL Trigger: AAGGGCCGGTGGCAGTCCCCTTCCGAGCTGCTCAGGAGAAGAGCATGGCCGTGGCAGAGGGCCACATGCCCCTGGATTGCATGTTCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | CTGGCTCGCAGAGGGTGGGCCGGTGCTGCAGCAGCACGTGCTGACTaGGATCCTCCGCCTGAGAGAAGACCTGGCTGCAGAACATGCAAT | + |
Preference number: 5 (lower is better) Translates to: LARRGWAGAAAARAD*DPPPERRPGCRTCN Trigger: ATTGCATGTTCTGCAGCCAGGTCTTCTCTCAGGCGGAGGATCTCAGTCAGCACGTGCTGCTGCAGCACCGGCCCACCCTCTGCGAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | GAAGACCTGGCTGCAGAACATGCAATCCAGGGGCATGTGGCCCTCTaGCACGGCCATGCTCTTCTCCTGAGCAGCTCGGAAGGGGACTGC | + |
Preference number: 5 (lower is better) Translates to: EDLAAEHAIQGHVAL*HGHALLLSSSEGDC Trigger: GCAGTCCCCTTCCGAGCTGCTCAGGAGAAGAGCATGGCCGTGGCAGAGGGCCACATGCCCCTGGATTGCATGTTCTGCAGCCAGGTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CTGTCTTCCAGAGTGGTGCTGAGGTCTGGGGAGCAGGTCCCAGGCTaGCTTGCATCCACAGCCATGGTGGGTGACAGGGCATCAGTCCTC | + |
Preference number: 5 (lower is better) Translates to: LSSRVVLRSGEQVPG*LASTAMVGDRASVL Trigger: GAGGACTGATGCCCTGTCACCCACCATGGCTGTGGATGCAAGGCAGCCTGGGACCTGCTCCCCAGACCTCAGCACCACTCTGGAAGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | ACAGGGGTCCAGAGGCACTGTAGGGCTTCTGCACAGCCAACACACTaGGTGACTCCACCTCCCCAGGGCTCAGGAAACGGGCTTTGTGGG | + |
Preference number: 5 (lower is better) Translates to: TGVQRHCRASAQPTH*VTPPPQGSGNGLCG Trigger: CCCACAAAGCCCGTTTCCTGAGCCCTGGGGAGGTGGAGTCACCCAGTGTGTTGGCTGTGCAGAAGCCCTACAGTGCCTCTGGACCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGACTCAGGAAACGGGCTTaGTGGGGCAGCACAGGCGGT | + |
Preference number: 5 (lower is better) Translates to: GCPPSISSCLCTEEITLGLRKRA*WGSTGG Trigger: ACCGCCTGTGCTGCCCCACAAAGCCCGTTTCCTGAG...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CTCTGCCACGGCCATGCTCTTCTCCTGAGCAGCTCGGAAGGGGACTaGCACCGGCCCTTTTATGGGCACAGCATCATCCACCTCCATCTG | + |
Preference number: 5 (lower is better) Translates to: LCHGHALLLSSSEGD*HRPFYGHSIIHLHL Trigger: CAGATGGAGGTGGATGATGCTGTGCCCATAAAAGGGCCGGTGGCAGTCCCCTTCCGAGCTGCTCAGGAGAAGAGCATGGCCGTGGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | ACAGCCATGGTGGGTGACAGGGCATCAGTCCTCCTGTCCTTCCTGTaGACCCTCGAGTGCAGGACGAGCTGGTGGTATGTCCTGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: TAMVGDRASVLLSFL*TLECRTSWWYVLKA Trigger: AGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGACAGGAGGACTGATGCCCTGTCACCCACCATGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | GTCCTCCTGTCCTTCCTGTGCACCCTCGAGTGCAGGACGAGCTGGTaGTATGTCCTGAAGGCTTTGCTGCACTCAGAACAGTGCGTGGGC | + |
Preference number: 5 (lower is better) Translates to: VLLSFLCTLECRTSW*YVLKALLHSEQCVG Trigger: GCCCACGCACTGTTCTGAGTGCAGCAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGACAGGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | CAGCAGGGACGCCACCTTTGGGAAACAACTCTGACTGCTGCTGCCTaGTGGCACTGGTGCCCCCAGCATTGGGTTGTGACCTGTGTGACT | + |
Preference number: 5 (lower is better) Translates to: QQGRHLWETTLTAAA*WHWCPQHWVVTCVT Trigger: AGTCACACAGGTCACAACCCAATGCTGGGGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAAGGTGGCGTCCCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | CCTTCCTGTGCACCCTCGAGTGCAGGACGAGCTGGTGGTATGTCCTaGAGGCTTTGCTGCACTCAGAACAGTGCGTGGGCTTCTCCTTGC | + |
Preference number: 5 (lower is better) Translates to: PSCAPSSAGRAGGMS*RLCCTQNSAWASPC Trigger: GCAAGGAGAAGCCCACGCACTGTTCTGAGTGCAGCAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | GGTGACAGGGCATCAGTCCTCCTGTCCTTCCTGTGCACCCTCGAGTaGAGGACGAGCTGGTGGTATGTCCTGAAGGCTTTGCTGCACTCA | + |
Preference number: 5 (lower is better) Translates to: GDRASVLLSFLCTLE*RTSWWYVLKALLHS Trigger: TGAGTGCAGCAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGACAGGAGGACTGATGCCCTGTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CTTCCCGTGCTAAGGACCCAACCCCCTCTAGTCTGCAGACAGGGCTaGTGGCCTGAGGCTCCCCTGCTTTCTTTCTCTGCATGTCCAGAT | + |
Preference number: 5 (lower is better) Translates to: LPVLRTQPPLVCRQG*WPEAPLLSFSACPD Trigger: ATCTGGACATGCAGAGAAAGAAAGCAGGGGAGCCTCAGGCCAGCAGCCCTGTCTGCAGACTAGAGGGGGTTGGGTCCTTAGCACGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | ATAGCAGCAGGGACGCCACCTTTGGGAAACAACTCTGACTGCTGCTaGCTGGTGGCACTGGTGCCCCCAGCATTGGGTTGTGACCTGTGT | + |
Preference number: 5 (lower is better) Translates to: IAAGTPPLGNNSDCC*LVALVPPALGCDLC Trigger: ACACAGGTCACAACCCAATGCTGGGGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAAGGTGGCGTCCCTGCTGCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | CAGGGACGCCACCTTTGGGAAACAACTCTGACTGCTGCTGCCTGGTaGCACTGGTGCCCCCAGCATTGGGTTGTGACCTGTGTGACTTCA | + |
Preference number: 5 (lower is better) Translates to: QGRHLWETTLTAAAW*HWCPQHWVVTCVTS Trigger: TGAAGTCACACAGGTCACAACCCAATGCTGGGGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAAGGTGGCGTCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAGTCTTGGCCTTGGGCTaGTGCAGGCCAGACAAGGGA | + |
Preference number: 5 (lower is better) Translates to: VLPPSRAACALRKSPWETVLALG*CRPDKG Trigger: TCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGAC...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAGGGGCTAAAGTGCTGTaGTCTGGTCCTGAAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: GCPPSISSCLCTEEITLGGAKVL*SGPEVW Trigger: CCAGACTTCAGGACCAGACAACAGCACTTTAGCCCC...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAGTAGTAGTCTCTCCCTaGCTGTGCCCATGGGCCGTC | + |
Preference number: 5 (lower is better) Translates to: VLPPSRAACALRKSPWETVVVSP*LCPWAV Trigger: GACGGCCCATGGGCACAGCAAGGGAGAGACTACTAC...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | CATTGGTCCCTGCATGCTCTGTGTCCAGGGACACCGCACTGGACTTaGGTCTTTTGGGATGTGGCTCACTGTACTCTGCTGCGGCACTGC | + |
Preference number: 5 (lower is better) Translates to: HWSLHALCPGTPHWT*VFWDVAHCTLLRHC Trigger: GCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTGTCCCTGGACACAGAGCATGCAGGGACCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | AAATTTTTGGTCTGCGCACTGTCAGCAGCCGTTAGTAGCGCATCCTaGGGCTCCTGGCTCCGGCCTTCACTTTTGGACTCAGCGGCAGCA | + |
Preference number: 5 (lower is better) Translates to: KFLVCALSAAVSSAS*GSWLRPSLLDSAAA Trigger: TGCTGCCGCTGAGTCCAAAAGTGAAGGCCGGAGCCAGGAGCCGCAGGATGCGCTACTAACGGCTGCTGACAGTGCGCAGACCAAAAATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | AGGGACTTCGAGTGTGGTGAGAAGGCAGTCTTGGCCTTGGGCTTGTaGAGGCCAGACAAGGGAGGGACATCTTTTCCCAGCAAAGCCGGA | + |
Preference number: 5 (lower is better) Translates to: RDFECGEKAVLALGL*RPDKGGTSFPSKAG Trigger: TCCGGCTTTGCTGGGAAAAGATGTCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAAGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | TCAGTCCTCCTGTCCTTCCTGTGCACCCTCGAGTGCAGGACGAGCTaGTGGTATGTCCTGAAGGCTTTGCTGCACTCAGAACAGTGCGTG | + |
Preference number: 5 (lower is better) Translates to: SVLLSFLCTLECRTS*WYVLKALLHSEQCV Trigger: CACGCACTGTTCTGAGTGCAGCAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGACAGGAGGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | CTGAGTGCAGGGACTTCGAGTGTGGTGAGAAGGCAGTCTTGGCCTTaGGCTTGTGCAGGCCAGACAAGGGAGGGACATCTTTTCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: LSAGTSSVVRRQSWP*ACAGQTREGHLFPA Trigger: TGCTGGGAAAAGATGTCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAAGTCCCTGCACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | CGCCACCTTTGGGAAACAACTCTGACTGCTGCTGCCTGGTGGCACTaGTGCCCCCAGCATTGGGTTGTGACCTGTGTGACTTCAGGTTAC | + |
Preference number: 5 (lower is better) Translates to: RHLWETTLTAAAWWH*CPQHWVVTCVTSGY Trigger: GTAACCTGAAGTCACACAGGTCACAACCCAATGCTGGGGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAAGGTGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACATGCGTGGGCTTCTCCTaGCTACTGGACAACTTGGGG | + |
Preference number: 5 (lower is better) Translates to: VLPPSRAACALRKSPWETCVGFS*LLDNLG Trigger: CCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGCA...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CCGGTACGCCTGTTCCTCAGCACAGACTTGCTGCTGCCGTTCTTGTaGGGGTCAGGGTTGTACCTGTGCTCAAGTCTCTGGTGCATCATA | + |
Preference number: 5 (lower is better) Translates to: PVRLFLSTDLLLPFL*GSGLYLCSSLWCII Trigger: TATGATGCACCAGAGACTTGAGCACAGGTACAACCCTGACCCGCACAAGAACGGCAGCAGCAAGTCTGTGCTGAGGAACAGGCGTACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | CTCTGTGTCCAGGGACACCGCACTGGACTTGAGTCTTTTGGGATGTaGCTCACTGTACTCTGCTGCGGCACTGCCAGAATTCCGATGGCA | + |
Preference number: 5 (lower is better) Translates to: LCVQGHRTGLESFGM*LTVLCCGTARIPMA Trigger: TGCCATCGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTGTCCCTGGACACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | ATTTACAGTTACCTGAGGTGCAAGCTTTACAACATCCCCTGCCCACCCCACCCCGTCTTGGCCTTGGGCTaGTGCAGGCCAGACAAGGGA | + |
Preference number: 5 (lower is better) Translates to: IYSYLRCKLYNIPCPPHPVLALG*CRPDKG Trigger: TCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGAC...GGGGTGGGGTGGGCAGGGGATGTTGTAAAGCTTGCACCTCAGGTAACTGTAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | GGCTGGACCACTTCATTGATGGTGACTGGACTCTCCATGCCTTGCTaGAGCTTGCTCCTGGTGCCAGACTTGCCATTGTGTGTCCGCATG | + |
Preference number: 5 (lower is better) Translates to: GWTTSLMVTGLSMPC*SLLLVPDLPLCVRM Trigger: CATGCGGACACACAATGGCAAGTCTGGCACCAGGAGCAAGCTTCAGCAAGGCATGGAGAGTCCAGTCACCATCAATGAAGTGGTCCAGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CTCTTCCTGGGCAACGGCCACTTTTCCTTTGGTAGCCAACTGCCATaGCTGGTAGGTGGTGAACGGGTCAAGCTGAGGTATGCAGGTCAT | + |
Preference number: 5 (lower is better) Translates to: LFLGNGHFSFGSQLP*LVGGERVKLRYAGH Trigger: ATGACCTGCATACCTCAGCTTGACCCGTTCACCACCTACCAGGCATGGCAGTTGGCTACCAAAGGAAAAGTGGCCGTTGCCCAGGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CACCGCACTGGACTTGAGTCTTTTGGGATGTGGCTCACTGTACTCTaGTGCGGCACTGCCAGAATTCCGATGGCAGTAGTAGTCTCTCCC | + |
Preference number: 5 (lower is better) Translates to: HRTGLESFGMWLTVL*CGTARIPMAVVVSP Trigger: GGGAGAGACTACTACTGCCATCGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CACATGGTACTTGGGGAGCTCAAAGCCCCTTCTGCCATTGGTCCCTaGATGCTCTGTGTCCAGGGACACCGCACTGGACTTGAGTCTTTT | + |
Preference number: 5 (lower is better) Translates to: HMVLGELKAPSAIGP*MLCVQGHRTGLESF Trigger: AAAAGACTCAAGTCCAGTGCGGTGTCCCTGGACACAGAGCATGCAGGGACCAATGGCAGAAGGGGCTTTGAGCTCCCCAAGTACCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | ATGCTGGGGATCAGACACTTGCTCAAAGAGATTGCAGGACAGGCGTaGAGCGGCCCAAGGGATAGATTCAAAGGCCTGTCCTGGCAGTCA | + |
Preference number: 5 (lower is better) Translates to: MLGIRHLLKEIAGQA*SGPRDRFKGLSWQS Trigger: TGACTGCCAGGACAGGCCTTTGAATCTATCCCTTGGGCCGCTCCACGCCTGTCCTGCAATCTCTTTGAGCAAGTGTCTGATCCCCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TGGCAACTCTCCGAGACACCCAATCTTCCAAAAGAAAAGAACTTAGATGGCTCCGAAGTCTGGGGTGCTTaGCTTGGCCCCGAGGCCCCC | + |
Preference number: 5 (lower is better) Translates to: WQLSETPNLPKEKNLDGSEVWGA*LGPEAP Trigger: GGGGGCCTCGGGGCCAAGCAAAGCACCCCAGACTTC...GGAGCCATCTAAGTTCTTTTCTTTTGGAAGATTGGGTGTCTCGGAGAGTTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAGTGACTTCAGGTTACTaGGGGCTAAAGTGCTGTTGT | + |
Preference number: 5 (lower is better) Translates to: GCPPSISSCLCTEEITLGVTSGY*GLKCCC Trigger: ACAACAGCACTTTAGCCCCAAGTAACCTGAAGTCAC...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | TCACTTTTGGACTCAGCGGCAGCATCCACCGGCTGCTTGTCTTTGTaGTGTCTCTCCAAGTGGTACCTCAGAGATGTCTTCTGGGCTGCG | + |
Preference number: 5 (lower is better) Translates to: SLLDSAAASTGCLSL*CLSKWYLRDVFWAA Trigger: CGCAGCCCAGAAGACATCTCTGAGGTACCACTTGGAGAGACATCACAAAGACAAGCAGCCGGTGGATGCTGCCGCTGAGTCCAAAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | CGCACTGGACTTGAGTCTTTTGGGATGTGGCTCACTGTACTCTGCTaGGGCACTGCCAGAATTCCGATGGCAGTAGTAGTCTCTCCCTTG | + |
Preference number: 5 (lower is better) Translates to: RTGLESFGMWLTVLC*GTARIPMAVVVSPL Trigger: CAAGGGAGAGACTACTACTGCCATCGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACAGAGCATGAGTCGTCATaGTCTGTGCTTCCTTCTTGG | + |
Preference number: 5 (lower is better) Translates to: VLPPSRAACALRKSPWETEHESS*SVLPSW Trigger: CCAAGAAGGAAGCACAGACAATGACGACTCATGCTC...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAACACTGGGGATCAGACACTaGCTCAAAGAGATTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: VLPPSRAACALRKSPWETLGIRH*LKEIAG Trigger: TCCTGCAATCTCTTTGAGCAAGTGTCTGATCCCCAG...TGTTTCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | TGGCACTGGGGACAGTTTCTTTGGCGTGAACCTTGCTGTGCTCAATaGGGCTCTGCTTATTTGGGAAGAGGAAGCCGCAGACCATGCAGA | + |
Preference number: 5 (lower is better) Translates to: WHWGQFLWREPCCAQ*GSAYLGRGSRRPCR Trigger: TCTGCATGGTCTGCGGCTTCCTCTTCCCAAATAAGCAGAGCCTCATTGAGCACAGCAAGGTTCACGCCAAAGAAACTGTCCCCAGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | TCATCAGGGGCAACGTTGCTGGCACTGGGGACAGTTTCTTTGGCGTaGACCTTGCTGTGCTCAATGAGGCTCTGCTTATTTGGGAAGAGG | + |
Preference number: 5 (lower is better) Translates to: SSGATLLALGTVSLA*TLLCSMRLCLFGKR Trigger: CCTCTTCCCAAATAAGCAGAGCCTCATTGAGCACAGCAAGGTTCACGCCAAAGAAACTGTCCCCAGTGCCAGCAACGTTGCCCCTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGGGCTGGACCACTTCATaGATGGTGACTGGACTCTCC | + |
Preference number: 5 (lower is better) Translates to: CTYGSACGREQGLVYMFLGWTTS*MVTGLS Trigger: GGAGAGTCCAGTCACCATCAATGAAGTGGTCCAGCC...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | AGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGAAGCCCCTTCTGCCATaGGTCCCTGCATGCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: SLCTYGSACGREQGLVYMKPLLP*VPACSV Trigger: CACAGAGCATGCAGGGACCAATGGCAGAAGGGGCTT...CATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTGGAAGTGTGTACTTGCACTCAGGAAACGGGCTTaGTGGGGCAGCACAGGCGGT | + |
Preference number: 5 (lower is better) Translates to: VRSQKMNQCMIPWKCVLALRKRA*WGSTGG Trigger: ACCGCCTGTGCTGCCCCACAAAGCCCGTTTCCTGAG...TGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | TTCACTGTACTACCTGCAGTTGATCTGGGTCTCAAGTTCAAAAACTaGAGCAACTCTTCCCTCGGGGACGTGGGTTCCTCTCGGTGGTCA | + |
Preference number: 5 (lower is better) Translates to: FTVLPAVDLGLKFKN*SNSSLGDVGSSRWS Trigger: TGACCACCGAGAGGAACCCACGTCCCCGAGGGAAGAGTTGCTGCAGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTAGTACAGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | GGAGTCCTTATGCTTCTTCATGTGGCTCTCAACATCAAAAGCCACTaGGAATGTCTGCCCACACACATCACAGCTCAACTCCTCGGGGTC | + |
Preference number: 5 (lower is better) Translates to: GVLMLLHVALNIKSH*ECLPTHITAQLLGV Trigger: GACCCCGAGGAGTTGAGCTGTGATGTGTGTGGGCAGACATTCCCAGTGGCTTTTGATGTTGAGAGCCACATGAAGAAGCATAAGGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | GAGGTATGCAGGTCATGGGCTTCACTGTACTACCTGCAGTTGATCTaGGTCTCAAGTTCAAAAACTGCAGCAACTCTTCCCTCGGGGACG | + |
Preference number: 5 (lower is better) Translates to: EVCRSWASLYYLQLI*VSSSKTAATLPSGT Trigger: CGTCCCCGAGGGAAGAGTTGCTGCAGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTAGTACAGTGAAGCCCATGACCTGCATACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GGCTGTCCTCCCTCCATCTCGAGCTGCCTGTGCACTGAGGAAATCACCCTGGGAAATCTCTTTAAATTTTaGGTCTGCGCACTGTCAGCA | + |
Preference number: 5 (lower is better) Translates to: GCPPSISSCLCTEEITLGNLFKF*VCALSA Trigger: TGCTGACAGTGCGCAGACCAAAAATTTAAAGAGATT...TCCCAGGGTGATTTCCTCAGTGCACAGGCAGCTCGAGATGGAGGGAGGACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTGGGGCTAAAGTGCTGTaGTCTGGTCCTGAAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGGAKVL*SGPEVW Trigger: CCAGACTTCAGGACCAGACAACAGCACTTTAGCCCC...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGAGGCTTCTCTTTGTCTaGGGAGAGACCTGGACAACT | + |
Preference number: 5 (lower is better) Translates to: CTYGSACGREQGLVYMFLRLLFV*GETWTT Trigger: AGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCCT...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | CCAGGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTATCTCCTTAAGCTGCTaGGCAGGTGGGCTTCCCTTA | + |
Preference number: 5 (lower is better) Translates to: PGLHSTQEVRHFPRTPHGISLSC*AGGLPL Trigger: TAAGGGAAGCCCACCTGCCAAGCAGCTTAAGGAGAT...ACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACATTCCTCAGCACAGACTaGCTGCTGCCGTTCTTGTGC | + |
Preference number: 5 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTFLSTD*LLPFLC Trigger: GCACAAGAACGGCAGCAGCAAGTCTGTGCTGAGGAA...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | AAGCTGAGGTATGCAGGTCATGGGCTTCACTGTACTACCTGCAGTTaGTCTGGGTCTCAAGTTCAAAAACTGCAGCAACTCTTCCCTCGG | + |
Preference number: 5 (lower is better) Translates to: KLRYAGHGLHCTTCS*SGSQVQKLQQLFPR Trigger: CCGAGGGAAGAGTTGCTGCAGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTAGTACAGTGAAGCCCATGACCTGCATACCTCAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | AATCTCCTCCCGCACATGCTGCACCCATACGTGAAGGAGTCCTTATaGTTCTTCATGTGGCTCTCAACATCAAAAGCCACTGGGAATGTC | + |
Preference number: 5 (lower is better) Translates to: NLLPHMLHPYVKESL*FFMWLSTSKATGNV Trigger: GACATTCCCAGTGGCTTTTGATGTTGAGAGCCACATGAAGAAGCATAAGGACTCCTTCACGTATGGGTGCAGCATGTGCGGGAGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | CACATGCTGCACCCATACGTGAAGGAGTCCTTATGCTTCTTCATGTaGCTCTCAACATCAAAAGCCACTGGGAATGTCTGCCCACACACA | + |
Preference number: 5 (lower is better) Translates to: HMLHPYVKESLCFFM*LSTSKATGNVCPHT Trigger: TGTGTGTGGGCAGACATTCCCAGTGGCTTTTGATGTTGAGAGCCACATGAAGAAGCATAAGGACTCCTTCACGTATGGGTGCAGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAAGTGCCAGACTTGCCATaGTGTGTCCGCATGTGGTTC | + |
Preference number: 5 (lower is better) Translates to: SRERASCTLTAFRQRWCQVPDLP*CVRMWF Trigger: GAACCACATGCGGACACACAATGGCAAGTCTGGCAC...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTGGAAGTGTGTACTTGCAGTGCCAGACTTGCCATaGTGTGTCCGCATGTGGTTC | + |
Preference number: 5 (lower is better) Translates to: VRSQKMNQCMIPWKCVLAVPDLP*CVRMWF Trigger: GAACCACATGCGGACACACAATGGCAAGTCTGGCAC...TGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAATTCCTCAGCACAGACTaGCTGCTGCCGTTCTTGTGC | + |
Preference number: 5 (lower is better) Translates to: SRERASCTLTAFRQRWCQFLSTD*LLPFLC Trigger: GCACAAGAACGGCAGCAGCAAGTCTGTGCTGAGGAA...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGCTGCTTTTACTTGTTTaGGACTTTCCAGACCCTTCC | + |
Preference number: 5 (lower is better) Translates to: CTYGSACGREQGLVYMFLLLLLV*DFPDPS Trigger: GGAAGGGTCTGGAAAGTCCAAAACAAGTAAAAGCAG...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TCTCGAGAACGAGCTTCCTGTACACTCACTGCATTTAGGCAAAGATGGTGTCAAATCTCCTTAAGCTGCTaGGCAGGTGGGCTTCCCTTA | + |
Preference number: 5 (lower is better) Translates to: SRERASCTLTAFRQRWCQISLSC*AGGLPL Trigger: TAAGGGAAGCCCACCTGCCAAGCAGCTTAAGGAGAT...TTGACACCATCTTTGCCTAAATGCAGTGAGTGTACAGGAAGCTCGTTCTCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | TTAACATCTTTGGCACCATCAAGAAATCTCTTTAAATTTTTGGTCTaGGCACTGTCAGCAGCCGTTAGTAGCGCATCCTGCGGCTCCTGG | + |
Preference number: 5 (lower is better) Translates to: LTSLAPSRNLFKFLV*ALSAAVSSASCGSW Trigger: CCAGGAGCCGCAGGATGCGCTACTAACGGCTGCTGACAGTGCGCAGACCAAAAATTTAAAGAGATTTCTTGATGGTGCCAAAGATGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACAGTGACTTCAGGTTACTaGGGGCTAAAGTGCTGTTGT | + |
Preference number: 5 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTVTSGY*GLKCCC Trigger: ACAACAGCACTTTAGCCCCAAGTAACCTGAAGTCAC...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | TGTACATATGGCTCAGCTTGTGGACGGGAACAGGGCCTAGTGTACATGTTCCTGTACTCAACAGAACCGTaGCTATTATTACTGCTGAGG | + |
Preference number: 5 (lower is better) Translates to: CTYGSACGREQGLVYMFLYSTEP*LLLLLR Trigger: CCTCAGCAGTAATAATAGCAACGGTTCTGTTGAGTA...CAGGAACATGTACACTAGGCCCTGTTCCCGTCCACAAGCTGAGCCATATGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTGCGCTCTCAGAAGATGAACCAATGTATGATTCCGTGGAAGTGTGTACTTGCACTGGACTTGAGTCTTTaGGGATGTGGCTCACTGTAC | + |
Preference number: 5 (lower is better) Translates to: VRSQKMNQCMIPWKCVLALDLSL*GCGSLY Trigger: GTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAG...TGCAAGTACACACTTCCACGGAATCATACATTGGTTCATCTTCTGAGAGCGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGAAGCCCCTTCTGCCATaGGTCCCTGCATGCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: VSTFRSISNVKTNNRLSEKPLLP*VPACSV Trigger: CACAGAGCATGCAGGGACCAATGGCAGAAGGGGCTT...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | AGCTGCATGTTTATGGAAATCCTGAGTATCGTTGCTGTGTGCTGGTaGGAGAACACTCTGGAAGACAGAAGGCATCTCCTTAAGCTGCTT | + |
Preference number: 5 (lower is better) Translates to: SCMFMEILSIVAVCW*ENTLEDRRHLLKLL Trigger: AAGCAGCTTAAGGAGATGCCTTCTGTCTTCCAGAGTGTTCTCTCACCAGCACACAGCAACGATACTCAGGATTTCCATAAACATGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 90 bp | TTCCTCGCTTTCTCAGCACTATCAGCTGCATGTTTATGGAAATCCTaGGTATCGTTGCTGTGTGCTGGTGAGAGAACACTCTGGAAGACA | + |
Preference number: 5 (lower is better) Translates to: FLAFSALSAACLWKS*VSLLCAGERTLWKT Trigger: TGTCTTCCAGAGTGTTCTCTCACCAGCACACAGCAACGATACTCAGGATTTCCATAAACATGCAGCTGATAGTGCTGAGAAAGCGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 90 bp | TCTCAGCACTATCAGCTGCATGTTTATGGAAATCCTGAGTATCGTTaGTGTGTGCTGGTGAGAGAACACTCTGGAAGACAGAAGGCATCT | + |
Preference number: 5 (lower is better) Translates to: SQHYQLHVYGNPEYR*CVLVREHSGRQKAS Trigger: AGATGCCTTCTGTCTTCCAGAGTGTTCTCTCACCAGCACACAGCAACGATACTCAGGATTTCCATAAACATGCAGCTGATAGTGCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | CTAAGAAAACAGTCTAGCTTATGTACATATGGCTCAGCTTGTGGACGGGAACAGCCAATGCTGGCTCTGTaGGCTCCAGAGCTTTATCAA | + |
Preference number: 5 (lower is better) Translates to: LRKQSSLCTYGSACGREQPMLAL*APELYQ Trigger: TTGATAAAGCTCTGGAGCCAACAGAGCCAGCATTGG...CTGTTCCCGTCCACAAGCTGAGCCATATGTACATAAGCTAGACTGTTTTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAAGAGCATGAGTCGTCATaGTCTGTGCTTCCTTCTTGG | + |
Preference number: 5 (lower is better) Translates to: RPTAPTRFYCYLVQRLTEEHESS*SVLPSW Trigger: CCAAGAAGGAAGCACAGACAATGACGACTCATGCTC...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACCTGGGGATCAGACACTaGCTCAAAGAGATTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: KRSSYKSRHISTQVSIQHLGIRH*LKEIAG Trigger: TCCTGCAATCTCTTTGAGCAAGTGTCTGATCCCCAG...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCGTAGTAGTCTCTCCCTaGCTGTGCCCATGGGCCGTC | + |
Preference number: 5 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCVVVSP*LCPWAV Trigger: GACGGCCCATGGGCACAGCAAGGGAGAGACTACTAC...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | TTCACTATTAGCATGTCTAGGCTTCTCTTTGTCTTGGGAGAGACCTaGACAACTGCTTTTACTTGTTTTGGACTTTCCAGACCCTTCCGC | + |
Preference number: 5 (lower is better) Translates to: FTISMSRLLFVLGET*TTAFTCFGLSRPFR Trigger: GCGGAAGGGTCTGGAAAGTCCAAAACAAGTAAAAGCAGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCCTAGACATGCTAATAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GGTCTCCATTCAACACAAGAGGTAAGACATTTCCCAAGGACCCCTCATGGTACAGACAACTGCTTTTACTaGTTTTGGACTTTCCAGACC | + |
Preference number: 5 (lower is better) Translates to: GLHSTQEVRHFPRTPHGTDNCFY*FWTFQT Trigger: GGTCTGGAAAGTCCAAAACAAGTAAAAGCAGTTGTC...TGTACCATGAGGGGTCCTTGGGAAATGTCTTACCTCTTGTGTTGAATGGAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 90 bp | CCAGAAGGCACTTCACTATTAGCATGTCTAGGCTTCTCTTTGTCTTaGGAGAGACCTGGACAACTGCTTTTACTTGTTTTGGACTTTCCA | + |
Preference number: 5 (lower is better) Translates to: PEGTSLLACLGFSLS*ERPGQLLLLVLDFP Trigger: TGGAAAGTCCAAAACAAGTAAAAGCAGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCCTAGACATGCTAATAGTGAAGTGCCTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | GTGTCAACATTTCGTTCCATCAGCAATGTGAAGACAAACAATAGACTCAGTGAGCTGGACTTGAGTCTTTaGGGATGTGGCTCACTGTAC | + |
Preference number: 5 (lower is better) Translates to: VSTFRSISNVKTNNRLSELDLSL*GCGSLY Trigger: GTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAG...CTCACTGAGTCTATTGTTTGTCTTCACATTGCTGATGGAACGAAATGTTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | AAAAGATCTTCCTACAAGAGCAGACACATCTCAACCCAGGTCTCCATTCAACACGACAACTGCTTTTACTaGTTTTGGACTTTCCAGACC | + |
Preference number: 5 (lower is better) Translates to: KRSSYKSRHISTQVSIQHDNCFY*FWTFQT Trigger: GGTCTGGAAAGTCCAAAACAAGTAAAAGCAGTTGTC...GTGTTGAATGGAGACCTGGGTTGAGATGTGTCTGCTCTTGTAGGAAGATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | CTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCTTCCAGGCTTCTCTTTGTCTaGGGAGAGACCTGGACAACT | + |
Preference number: 5 (lower is better) Translates to: LQIQTISLSFPLPLKIASRLLFV*GETWTT Trigger: AGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCCT...GGAAGCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAATACTCAACAGAACCGTaGCTATTATTACTGCTGAGG | + |
Preference number: 5 (lower is better) Translates to: RPTAPTRFYCYLVQRLTEYSTEP*LLLLLR Trigger: CCTCAGCAGTAATAATAGCAACGGTTCTGTTGAGTA...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS-3UTR CAA 90 bp | AAGACTCCAAATACAAACGATTTCCCTAAGCTTTCCACTCCCTTTAAAAATTGCCCAATGCTGGCTCTGTaGGCTCCAGAGCTTTATCAA | + |
Preference number: 5 (lower is better) Translates to: KTPNTNDFPKLSTPFKNCPMLAL*APELYQ Trigger: TTGATAAAGCTCTGGAGCCAACAGAGCCAGCATTGG...GCAATTTTTAAAGGGAGTGGAAAGCTTAGGGAAATCGTTTGTATTTGGAGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS-3UTR CAA 90 bp | CGCCCAACGGCTCCCACTCGTTTTTATTGCTATTTGGTACAAAGGTTAACAGAAAATCTCTTTAAATTTTaGGTCTGCGCACTGTCAGCA | + |
Preference number: 5 (lower is better) Translates to: RPTAPTRFYCYLVQRLTENLFKF*VCALSA Trigger: TGCTGACAGTGCGCAGACCAAAAATTTAAAGAGATT...TTCTGTTAACCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | GGCATGTGGCCCTCTGCCACGGCCATGCTCTTCTCCTaGGCAGCTCGGAAGGGGACTGCCACCGGCCCTTTT | + |
Preference number: 6 (lower is better) Translates to: GMWPSATAMLFS*AARKGTATGPF Trigger: AAAAGGGCCGGTGGCAGTCCCCTTCCGAGCTGCTCAGGAGAAGAGCATGGCCGTGGCAGAGGGCCACATGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | TGCAATCCAGGGGCATGTGGCCCTCTGCCACGGCCATaGTCTTCTCCTGAGCAGCTCGGAAGGGGACTGCCA | + |
Preference number: 6 (lower is better) Translates to: CNPGACGPLPRP*SSPEQLGRGLP Trigger: TGGCAGTCCCCTTCCGAGCTGCTCAGGAGAAGAGCATGGCCGTGGCAGAGGGCCACATGCCCCTGGATTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
||
CDS GCA 72 bp | AGAGTGGTGCTGAGGTCTGGGGAGCAGGTCCCAGGCTaGCTTGCATCCACAGCCATGGTGGGTGACAGGGCA | + |
Preference number: 6 (lower is better) Translates to: RVVLRSGEQVPG*LASTAMVGDRA Trigger: TGCCCTGTCACCCACCATGGCTGTGGATGCAAGGCAGCCTGGGACCTGCTCCCCAGACCTCAGCACCACTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CTTGGCCCCGAGGCCCCCTGCCGAGCCTTCTCTGAGTaGAGGGACTTCGAGTGTGGTGAGAAGGCAGTCTTG | + |
Preference number: 6 (lower is better) Translates to: LGPEAPCRAFSE*RDFECGEKAVL Trigger: CAAGACTGCCTTCTCACCACACTCGAAGTCCCTGCACTCAGAGAAGGCTCGGCAGGGGGCCTCGGGGCCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CACAGGCCTCTTTCCTTCAAGGGCTGGGCTGCCTCCTaGGTGTCCCACGGGTCCACAGGTATACAGGGGTCC | + |
Preference number: 6 (lower is better) Translates to: HRPLSFKGWAAS*VSHGSTGIQGS Trigger: GGACCCCTGTATACCTGTGGACCCGTGGGACACGCAGGAGGCAGCCCAGCCCTTGAAGGAAAGAGGCCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | GGTCCCAGGCTGCCTTGCATCCACAGCCATGGTGGGTaGCAGGGCATCAGTCCTCCTGTCCTTCCTGTGCAC | + |
Preference number: 6 (lower is better) Translates to: GPRLPCIHSHGG*QGISPPVLPVH Trigger: GTGCACAGGAAGGACAGGAGGACTGATGCCCTGTCACCCACCATGGCTGTGGATGCAAGGCAGCCTGGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | CAGAGGCACTGTAGGGCTTCTGCACAGCCAACACACTaGGTGACTCCACCTCCCCAGGGCTCAGGAAACGGG | + |
Preference number: 6 (lower is better) Translates to: QRHCRASAQPTH*VTPPPQGSGNG Trigger: CCCGTTTCCTGAGCCCTGGGGAGGTGGAGTCACCCAGTGTGTTGGCTGTGCAGAAGCCCTACAGTGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GTGGGTGACAGGGCATCAGTCCTCCTGTCCTTCCTGTaGACCCTCGAGTGCAGGACGAGCTGGTGGTATGTC | + |
Preference number: 6 (lower is better) Translates to: VGDRASVLLSFL*TLECRTSWWYV Trigger: GACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGACAGGAGGACTGATGCCCTGTCACCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | AGCAGGTCCCAGGCTGCCTTGCATCCACAGCCATGGTaGGTGACAGGGCATCAGTCCTCCTGTCCTTCCTGT | + |
Preference number: 6 (lower is better) Translates to: SRSQAALHPQPW*VTGHQSSCPSC Trigger: ACAGGAAGGACAGGAGGACTGATGCCCTGTCACCCACCATGGCTGTGGATGCAAGGCAGCCTGGGACCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | CGCCACCTTTGGGAAACAACTCTGACTGCTGCTGCCTaGTGGCACTGGTGCCCCCAGCATTGGGTTGTGACC | + |
Preference number: 6 (lower is better) Translates to: RHLWETTLTAAA*WHWCPQHWVVT Trigger: GGTCACAACCCAATGCTGGGGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAAGGTGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | GCACCCTCGAGTGCAGGACGAGCTGGTGGTATGTCCTaGAGGCTTTGCTGCACTCAGAACAGTGCGTGGGCT | + |
Preference number: 6 (lower is better) Translates to: APSSAGRAGGMS*RLCCTQNSAWA Trigger: AGCCCACGCACTGTTCTGAGTGCAGCAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | CCAACCCCCTCTAGTCTGCAGACAGGGCTGCTGGCCTaGGGCTCCCCTGCTTTCTTTCTCTGCATGTCCAGA | + |
Preference number: 6 (lower is better) Translates to: PTPSSLQTGLLA*GSPAFFLCMSR Trigger: TCTGGACATGCAGAGAAAGAAAGCAGGGGAGCCTCAGGCCAGCAGCCCTGTCTGCAGACTAGAGGGGGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CTAAGGACCCAACCCCCTCTAGTCTGCAGACAGGGCTaGTGGCCTGAGGCTCCCCTGCTTTCTTTCTCTGCA | + |
Preference number: 6 (lower is better) Translates to: LRTQPPLVCRQG*WPEAPLLSFSA Trigger: TGCAGAGAAAGAAAGCAGGGGAGCCTCAGGCCAGCAGCCCTGTCTGCAGACTAGAGGGGGTTGGGTCCTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GATGTGACACAGGCCTCTTTCCTTCAAGGGCTGGGCTaGCTCCTGCGTGTCCCACGGGTCCACAGGTATACA | + |
Preference number: 6 (lower is better) Translates to: DVTQASFLQGLG*LLRVPRVHRYT Trigger: TGTATACCTGTGGACCCGTGGGACACGCAGGAGGCAGCCCAGCCCTTGAAGGAAAGAGGCCTGTGTCACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | AGTGCAGGGACTTCGAGTGTGGTGAGAAGGCAGTCTTaGCCTTGGGCTTGTGCAGGCCAGACAAGGGAGGGA | + |
Preference number: 6 (lower is better) Translates to: SAGTSSVVRRQS*PWACAGQTREG Trigger: TCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAAGTCCCTGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | CACCCGGTACGCCTGTTCCTCAGCACAGACTTGCTGCTGCCGTTCTaGTGCGGGTCAGGGTTGTACCTGTGCTCAAGTCTCTGGTGCATC | + |
Preference number: 6 (lower is better) Translates to: HPVRLFLSTDLLLPF*CGSGLYLCSSLWCI Trigger: GATGCACCAGAGACTTGAGCACAGGTACAACCCTGACCCGCACAAGAACGGCAGCAGCAAGTCTGTGCTGAGGAACAGGCGTACCGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | GGCTCAGGTCTCTTCACCTTATCCATAGCAGCAGGGACGCCACCTTaGGGAAACAACTCTGACTGCTGCTGCCTGGTGGCACTGGTGCCC | + |
Preference number: 6 (lower is better) Translates to: GSGLFTLSIAAGTPP*GNNSDCCCLVALVP Trigger: GGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAAGGTGGCGTCCCTGCTGCTATGGATAAGGTGAAGAGACCTGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | TGCAGGGACTTCGAGTGTGGTGAGAAGGCAGTCTTGGCCTTGGGCTaGTGCAGGCCAGACAAGGGAGGGACATCTTTTCCCAGCAAAGCC | + |
Preference number: 6 (lower is better) Translates to: CRDFECGEKAVLALG*CRPDKGGTSFPSKA Trigger: GGCTTTGCTGGGAAAAGATGTCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAAGTCCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | TCTGAGTGCAGGGACTTCGAGTGTGGTGAGAAGGCAGTCTTGGCCTaGGGCTTGTGCAGGCCAGACAAGGGAGGGACATCTTTTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: SECRDFECGEKAVLA*GLCRPDKGGTSFPS Trigger: GCTGGGAAAAGATGTCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAAGTCCCTGCACTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | CCATTGGTCCCTGCATGCTCTGTGTCCAGGGACACCGCACTGGACTaGAGTCTTTTGGGATGTGGCTCACTGTACTCTGCTGCGGCACTG | + |
Preference number: 6 (lower is better) Translates to: PLVPACSVSRDTALD*SLLGCGSLYSAAAL Trigger: CAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTGTCCCTGGACACAGAGCATGCAGGGACCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GGCTCTGCTTATTTGGGAAGAGGAAGCCGCAGACCATaGAGATCTTGTAGGGCGTGGAGATGCTCCCAGGGG | + |
Preference number: 6 (lower is better) Translates to: GSAYLGRGSRRP*RSCRAWRCSQG Trigger: CCCCTGGGAGCATCTCCACGCCCTACAAGATCTGCATGGTCTGCGGCTTCCTCTTCCCAAATAAGCAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GCATCAGTCCTCCTGTCCTTCCTGTGCACCCTCGAGTaGAGGACGAGCTGGTGGTATGTCCTGAAGGCTTTG | + |
Preference number: 6 (lower is better) Translates to: ASVLLSFLCTLE*RTSWWYVLKAL Trigger: CAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGACAGGAGGACTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GAGTGTGGTGAGAAGGCAGTCTTGGCCTTGGGCTTGTaGAGGCCAGACAAGGGAGGGACATCTTTTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: ECGEKAVLALGL*RPDKGGTSFPS Trigger: GCTGGGAAAAGATGTCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | GGGACTTCGAGTGTGGTGAGAAGGCAGTCTTGGCCTTaGGCTTGTGCAGGCCAGACAAGGGAGGGACATCTT | + |
Preference number: 6 (lower is better) Translates to: GTSSVVRRQSWP*ACAGQTREGHL Trigger: AAGATGTCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | TGGGAAACAACTCTGACTGCTGCTGCCTGGTGGCACTaGTGCCCCCAGCATTGGGTTGTGACCTGTGTGACT | + |
Preference number: 6 (lower is better) Translates to: WETTLTAAAWWH*CPQHWVVTCVT Trigger: AGTCACACAGGTCACAACCCAATGCTGGGGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | CACCTTTGGGAAACAACTCTGACTGCTGCTGCCTGGTaGCACTGGTGCCCCCAGCATTGGGTTGTGACCTGT | + |
Preference number: 6 (lower is better) Translates to: HLWETTLTAAAW*HWCPQHWVVTC Trigger: ACAGGTCACAACCCAATGCTGGGGGCACCAGTGCCACCAGGCAGCAGCAGTCAGAGTTGTTTCCCAAAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | CCTGCATGCTCTGTGTCCAGGGACACCGCACTGGACTTGAGTCTTTaGGGATGTGGCTCACTGTACTCTGCTGCGGCACTGCCAGAATTC | + |
Preference number: 6 (lower is better) Translates to: PACSVSRDTALDLSL*GCGSLYSAAALPEF Trigger: GAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTGTCCCTGGACACAGAGCATGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | CACTCTGGTGGTAGCAAGGAGGTGATGCTCCTGACCACATGGTACTaGGGGAGCTCAAAGCCCCTTCTGCCATTGGTCCCTGCATGCTCT | + |
Preference number: 6 (lower is better) Translates to: HSGGSKEVMLLTTWY*GSSKPLLPLVPACS Trigger: AGAGCATGCAGGGACCAATGGCAGAAGGGGCTTTGAGCTCCCCAAGTACCATGTGGTCAGGAGCATCACCTCCTTGCTACCACCAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GCTCAACTCCTCGGGGTCTTCGCCACTCTTCTCCAATaGTGGCTCTGTTGGCTCCAGAGCTTTATCAAGGGG | + |
Preference number: 6 (lower is better) Translates to: AQLLGVFATLLQ*WLCWLQSFIKG Trigger: CCCCTTGATAAAGCTCTGGAGCCAACAGAGCCAGCATTGGAGAAGAGTGGCGAAGACCCCGAGGAGTTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | TCCTTCCTGTGCACCCTCGAGTGCAGGACGAGCTGGTaGTATGTCCTGAAGGCTTTGCTGCACTCAGAACAG | + |
Preference number: 6 (lower is better) Translates to: SFLCTLECRTSW*YVLKALLHSEQ Trigger: CTGTTCTGAGTGCAGCAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | CTGTCCTTCCTGTGCACCCTCGAGTGCAGGACGAGCTaGTGGTATGTCCTGAAGGCTTTGCTGCACTCAGAA | + |
Preference number: 6 (lower is better) Translates to: LSFLCTLECRTS*WYVLKALLHSE Trigger: TTCTGAGTGCAGCAAAGCCTTCAGGACATACCACCAGCTCGTCCTGCACTCGAGGGTGCACAGGAAGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | TTCGAGTGTGGTGAGAAGGCAGTCTTGGCCTTGGGCTaGTGCAGGCCAGACAAGGGAGGGACATCTTTTCCC | + |
Preference number: 6 (lower is better) Translates to: FECGEKAVLALG*CRPDKGGTSFP Trigger: GGGAAAAGATGTCCCTCCCTTGTCTGGCCTGCACAAGCCCAAGGCCAAGACTGCCTTCTCACCACACTCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | TCTGTGTCCAGGGACACCGCACTGGACTTGAGTCTTTaGGGATGTGGCTCACTGTACTCTGCTGCGGCACTG | + |
Preference number: 6 (lower is better) Translates to: SVSRDTALDLSL*GCGSLYSAAAL Trigger: CAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTGTCCCTGGACACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CCATGCCTTGCTGAAGCTTGCTCCTGGTGCCAGACTTaGCATTGTGTGTCCGCATGTGGTTCTTCAGGAACC | + |
Preference number: 6 (lower is better) Translates to: PCLAEACSWCQT*HCVSACGSSGT Trigger: GGTTCCTGAAGAACCACATGCGGACACACAATGGCAAGTCTGGCACCAGGAGCAAGCTTCAGCAAGGCATGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GGCAACGGCCACTTTTCCTTTGGTAGCCAACTGCCATaGCTGGTAGGTGGTGAACGGGTCAAGCTGAGGTAT | + |
Preference number: 6 (lower is better) Translates to: GNGHFSFGSQLP*LVGGERVKLRY Trigger: ATACCTCAGCTTGACCCGTTCACCACCTACCAGGCATGGCAGTTGGCTACCAAAGGAAAAGTGGCCGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CTGCTGCCGTTCTTGTGCGGGTCAGGGTTGTACCTGTaGTCAAGTCTCTGGTGCATCATAAGGACTTCCGGA | + |
Preference number: 6 (lower is better) Translates to: LLPFLCGSGLYL*SSLWCIIRTSG Trigger: TCCGGAAGTCCTTATGATGCACCAGAGACTTGAGCACAGGTACAACCCTGACCCGCACAAGAACGGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | CAACTCCTCGGGGTCTTCGCCACTCTTCTCCAATGCTaGCTCTGTTGGCTCCAGAGCTTTATCAAGGGGACT | + |
Preference number: 6 (lower is better) Translates to: QLLGVFATLLQC*LCWLQSFIKGT Trigger: AGTCCCCTTGATAAAGCTCTGGAGCCAACAGAGCCAGCATTGGAGAAGAGTGGCGAAGACCCCGAGGAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | CAGGGACACCGCACTGGACTTGAGTCTTTTGGGATGTaGCTCACTGTACTCTGCTGCGGCACTGCCAGAATT | + |
Preference number: 6 (lower is better) Translates to: QGHRTGLESFGM*LTVLCCGTARI Trigger: AATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTGTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | CCTGCATGCTCTGTGTCCAGGGACACCGCACTGGACTaGAGTCTTTTGGGATGTGGCTCACTGTACTCTGCT | + |
Preference number: 6 (lower is better) Translates to: PACSVSRDTALD*SLLGCGSLYSA Trigger: AGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCCAGTGCGGTGTCCCTGGACACAGAGCATGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | GTCCTGAAGGCTTTGCTGCACTCAGAACAGTGCGTGGGCTTCTCCTaGCTACTGGACAACTTGGGGTCACTATCCCCAGAAGGCACTTCA | + |
Preference number: 6 (lower is better) Translates to: VLKALLHSEQCVGFS*LLDNLGSLSPEGTS Trigger: TGAAGTGCCTTCTGGGGATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGCACTGTTCTGAGTGCAGCAAAGCCTTCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | TTCCTCAGCACAGACTTGCTGCTGCCGTTCTTGTGCGGGTCAGGGTaGTACCTGTGCTCAAGTCTCTGGTGCATCATAAGGACTTCCGGA | + |
Preference number: 6 (lower is better) Translates to: FLSTDLLLPFLCGSG*YLCSSLWCIIRTSG Trigger: TCCGGAAGTCCTTATGATGCACCAGAGACTTGAGCACAGGTACAACCCTGACCCGCACAAGAACGGCAGCAGCAAGTCTGTGCTGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | GACTCAGCGGCAGCATCCACCGGCTGCTTGTCTTTGTaGTGTCTCTCCAAGTGGTACCTCAGAGATGTCTTC | + |
Preference number: 6 (lower is better) Translates to: DSAAASTGCLSL*CLSKWYLRDVF Trigger: GAAGACATCTCTGAGGTACCACTTGGAGAGACATCACAAAGACAAGCAGCCGGTGGATGCTGCCGCTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CTTTGCTGCACTCAGAACAGTGCGTGGGCTTCTCCTTaGTACTGGACAACTTGGGGTCACTATCCCCAGAAG | + |
Preference number: 6 (lower is better) Translates to: LCCTQNSAWASP*YWTTWGHYPQK Trigger: CTTCTGGGGATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGCACTGTTCTGAGTGCAGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | TGCACTCAGAACAGTGCGTGGGCTTCTCCTTGCTACTaGACAACTTGGGGTCACTATCCCCAGAAGGCACTT | + |
Preference number: 6 (lower is better) Translates to: CTQNSAWASPCY*TTWGHYPQKAL Trigger: AAGTGCCTTCTGGGGATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGCACTGTTCTGAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | GCTTTGCTGCACTCAGAACAGTGCGTGGGCTTCTCCTaGCTACTGGACAACTTGGGGTCACTATCCCCAGAA | + |
Preference number: 6 (lower is better) Translates to: ALLHSEQCVGFS*LLDNLGSLSPE Trigger: TTCTGGGGATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGCACTGTTCTGAGTGCAGCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | ACAGACTTGCTGCTGCCGTTCTTGTGCGGGTCAGGGTaGTACCTGTGCTCAAGTCTCTGGTGCATCATAAGG | + |
Preference number: 6 (lower is better) Translates to: TDLLLPFLCGSG*YLCSSLWCIIR Trigger: CCTTATGATGCACCAGAGACTTGAGCACAGGTACAACCCTGACCCGCACAAGAACGGCAGCAGCAAGTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GTGACCTGTGTGACTTCAGGTTACTTGGGGCTAAAGTaGTGTTGTCTGGTCCTGAAGTCTGGGGTGCTTTGC | + |
Preference number: 6 (lower is better) Translates to: VTCVTSGYLGLK*CCLVLKSGVLC Trigger: GCAAAGCACCCCAGACTTCAGGACCAGACAACAGCACTTTAGCCCCAAGTAACCTGAAGTCACACAGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | TTTTGGGATGTGGCTCACTGTACTCTGCTGCGGCACTaGCAGAATTCCGATGGCAGTAGTAGTCTCTCCCTT | + |
Preference number: 6 (lower is better) Translates to: FWDVAHCTLLRH*QNSDGSSSLSL Trigger: AAGGGAGAGACTACTACTGCCATCGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CTTGAGTCTTTTGGGATGTGGCTCACTGTACTCTGCTaGGGCACTGCCAGAATTCCGATGGCAGTAGTAGTC | + |
Preference number: 6 (lower is better) Translates to: LESFGMWLTVLC*GTARIPMAVVV Trigger: GACTACTACTGCCATCGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GGACTTGAGTCTTTTGGGATGTGGCTCACTGTACTCTaGTGCGGCACTGCCAGAATTCCGATGGCAGTAGTA | + |
Preference number: 6 (lower is better) Translates to: GLESFGMWLTVL*CGTARIPMAVV Trigger: TACTACTGCCATCGGAATTCTGGCAGTGCCGCAGCAGAGTACAGTGAGCCACATCCCAAAAGACTCAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | CTGTGTGACTTCAGGTTACTTGGGGCTAAAGTGCTGTaGTCTGGTCCTGAAGTCTGGGGTGCTTTGCTTGGC | + |
Preference number: 6 (lower is better) Translates to: LCDFRLLGAKVL*SGPEVWGALLG Trigger: GCCAAGCAAAGCACCCCAGACTTCAGGACCAGACAACAGCACTTTAGCCCCAAGTAACCTGAAGTCACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | CTGCACTCAGAACAGTGCGTGGGCTTCTCCTTGCTACTGGACAACTaGGGGTCACTATCCCCAGAAGGCACTTCACTATTAGCATGTCTA | + |
Preference number: 6 (lower is better) Translates to: LHSEQCVGFSLLLDN*GSLSPEGTSLLACL Trigger: TAGACATGCTAATAGTGAAGTGCCTTCTGGGGATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGCACTGTTCTGAGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | ACTTCATTGATGGTGACTGGACTCTCCATGCCTTGCTaGAGCTTGCTCCTGGTGCCAGACTTGCCATTGTGT | + |
Preference number: 6 (lower is better) Translates to: TSLMVTGLSMPC*SLLLVPDLPLC Trigger: ACACAATGGCAAGTCTGGCACCAGGAGCAAGCTTCAGCAAGGCATGGAGAGTCCAGTCACCATCAATGAAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | GCAACGTTGCTGGCACTGGGGACAGTTTCTTTGGCGTaGACCTTGCTGTGCTCAATGAGGCTCTGCTTATTT | + |
Preference number: 6 (lower is better) Translates to: ATLLALGTVSLA*TLLCSMRLCLF Trigger: AAATAAGCAGAGCCTCATTGAGCACAGCAAGGTTCACGCCAAAGAAACTGTCCCCAGTGCCAGCAACGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | GAACAGTGCGTGGGCTTCTCCTTGCTACTGGACAACTaGGGGTCACTATCCCCAGAAGGCACTTCACTATTA | + |
Preference number: 6 (lower is better) Translates to: EQCVGFSLLLDN*GSLSPEGTSLL Trigger: TAATAGTGAAGTGCCTTCTGGGGATAGTGACCCCAAGTTGTCCAGTAGCAAGGAGAAGCCCACGCACTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | CAAGCTGAGGTATGCAGGTCATGGGCTTCACTGTACTACCTGCAGTaGATCTGGGTCTCAAGTTCAAAAACTGCAGCAACTCTTCCCTCG | + |
Preference number: 6 (lower is better) Translates to: QAEVCRSWASLYYLQ*IWVSSSKTAATLPS Trigger: CGAGGGAAGAGTTGCTGCAGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTAGTACAGTGAAGCCCATGACCTGCATACCTCAGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | CCGCACATGCTGCACCCATACGTGAAGGAGTCCTTATaGTTCTTCATGTGGCTCTCAACATCAAAAGCCACT | + |
Preference number: 6 (lower is better) Translates to: PHMLHPYVKESL*FFMWLSTSKAT Trigger: AGTGGCTTTTGATGTTGAGAGCCACATGAAGAAGCATAAGGACTCCTTCACGTATGGGTGCAGCATGTGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | AGAACACTCTGGAAGACAGAAGGCATCTCCTTAAGCTaGTTGGCAGGTGGGCTTCCCTTAACATCTTTGGCA | + |
Preference number: 6 (lower is better) Translates to: RTLWKTEGISLS*LAGGLPLTSLA Trigger: TGCCAAAGATGTTAAGGGAAGCCCACCTGCCAAGCAGCTTAAGGAGATGCCTTCTGTCTTCCAGAGTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GGCAGGGCTCTTCCTCGCTTTCTCAGCACTATCAGCTaGATGTTTATGGAAATCCTGAGTATCGTTGCTGTG | + |
Preference number: 6 (lower is better) Translates to: GRALPRFLSTIS*MFMEILSIVAV Trigger: CACAGCAACGATACTCAGGATTTCCATAAACATGCAGCTGATAGTGCTGAGAAAGCGAGGAAGAGCCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | TCCCCTAGTTCCTCTTTCTCTGAGCATGAGTCGTCATaGTCTGTGCTTCCTTCTTGGCCTGACTCTTTCACC | + |
Preference number: 6 (lower is better) Translates to: SPSSSFSEHESS*SVLPSWPDSFT Trigger: GGTGAAAGAGTCAGGCCAAGAAGGAAGCACAGACAATGACGACTCATGCTCAGAGAAAGAGGAACTAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | CAGCATTGGGTTGTGACCTGTGTGACTTCAGGTTACTaGGGGCTAAAGTGCTGTTGTCTGGTCCTGAAGTCT | + |
Preference number: 6 (lower is better) Translates to: QHWVVTCVTSGY*GLKCCCLVLKS Trigger: AGACTTCAGGACCAGACAACAGCACTTTAGCCCCAAGTAACCTGAAGTCACACAGGTCACAACCCAATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | ACCCATATTTCCCCTAGTTCCTCTTTCTCTGAGCATGAGTCGTCATaGTCTGTGCTTCCTTCTTGGCCTGACTCTTTCACCTCTTCCTGG | + |
Preference number: 6 (lower is better) Translates to: THISPSSSFSEHESS*SVLPSWPDSFTSSW Trigger: CCAGGAAGAGGTGAAAGAGTCAGGCCAAGAAGGAAGCACAGACAATGACGACTCATGCTCAGAGAAAGAGGAACTAGGGGAAATATGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | GTTCCTCTTTCTCTGAGCATGAGTCGTCATTGTCTGTaGTTCCTTCTTGGCCTGACTCTTTCACCTCTTCCT | + |
Preference number: 6 (lower is better) Translates to: VPLSLSMSRHCL*FLLGLTLSPLP Trigger: AGGAAGAGGTGAAAGAGTCAGGCCAAGAAGGAAGCACAGACAATGACGACTCATGCTCAGAGAAAGAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | ATGCTTCTTCATGTGGCTCTCAACATCAAAAGCCACTaGGAATGTCTGCCCACACACATCACAGCTCAACTC | + |
Preference number: 6 (lower is better) Translates to: MLLHVALNIKSH*ECLPTHITAQL Trigger: GAGTTGAGCTGTGATGTGTGTGGGCAGACATTCCCAGTGGCTTTTGATGTTGAGAGCCACATGAAGAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | CACCCATACGTGAAGGAGTCCTTATGCTTCTTCATGTaGCTCTCAACATCAAAAGCCACTGGGAATGTCTGC | + |
Preference number: 6 (lower is better) Translates to: HPYVKESLCFFM*LSTSKATGNVC Trigger: GCAGACATTCCCAGTGGCTTTTGATGTTGAGAGCCACATGAAGAAGCATAAGGACTCCTTCACGTATGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | AGGTCATGGGCTTCACTGTACTACCTGCAGTTGATCTaGGTCTCAAGTTCAAAAACTGCAGCAACTCTTCCC | + |
Preference number: 6 (lower is better) Translates to: RSWASLYYLQLI*VSSSKTAATLP Trigger: GGGAAGAGTTGCTGCAGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTAGTACAGTGAAGCCCATGACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | GGCATCTCCTTAAGCTGCTTGGCAGGTGGGCTTCCCTTAACATCTTaGGCACCATCAAGAAATCTCTTTAAATTTTTGGTCTGCGCACTG | + |
Preference number: 6 (lower is better) Translates to: GISLSCLAGGLPLTS*APSRNLFKFLVCAL Trigger: CAGTGCGCAGACCAAAAATTTAAAGAGATTTCTTGATGGTGCCAAAGATGTTAAGGGAAGCCCACCTGCCAAGCAGCTTAAGGAGATGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | TATGCAGGTCATGGGCTTCACTGTACTACCTGCAGTTaGTCTGGGTCTCAAGTTCAAAAACTGCAGCAACTC | + |
Preference number: 6 (lower is better) Translates to: YAGHGLHCTTCS*SGSQVQKLQQL Trigger: GAGTTGCTGCAGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTAGTACAGTGAAGCCCATGACCTGCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS GCA 72 bp | TTGGCACCATCAAGAAATCTCTTTAAATTTTTGGTCTaGGCACTGTCAGCAGCCGTTAGTAGCGCATCCTGC | + |
Preference number: 6 (lower is better) Translates to: LAPSRNLFKFLV*ALSAAVSSASC Trigger: GCAGGATGCGCTACTAACGGCTGCTGACAGTGCGCAGACCAAAAATTTAAAGAGATTTCTTGATGGTGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | GTATGCAGGTCATGGGCTTCACTGTACTACCTGCAGTaGATCTGGGTCTCAAGTTCAAAAACTGCAGCAACT | + |
Preference number: 6 (lower is better) Translates to: VCRSWASLYYLQ*IWVSSSKTAAT Trigger: AGTTGCTGCAGTTTTTGAACTTGAGACCCAGATCAACTGCAGGTAGTACAGTGAAGCCCATGACCTGCATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 90 bp | CCCAGAAGGCACTTCACTATTAGCATGTCTAGGCTTCTCTTTGTCTaGGGAGAGACCTGGACAACTGCTTTTACTTGTTTTGGACTTTCC | + |
Preference number: 6 (lower is better) Translates to: PRRHFTISMSRLLFV*GETWTTAFTCFGLS Trigger: GGAAAGTCCAAAACAAGTAAAAGCAGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCCTAGACATGCTAATAGTGAAGTGCCTTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS TCA 72 bp | TTCTCAGCACTATCAGCTGCATGTTTATGGAAATCCTaGGTATCGTTGCTGTGTGCTGGTGAGAGAACACTC | + |
Preference number: 6 (lower is better) Translates to: FSALSAACLWKS*VSLLCAGERTL Trigger: GAGTGTTCTCTCACCAGCACACAGCAACGATACTCAGGATTTCCATAAACATGCAGCTGATAGTGCTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | AGCATGTCTAGGCTTCTCTTTGTCTTGGGAGAGACCTaGACAACTGCTTTTACTTGTTTTGGACTTTCCAGA | + |
Preference number: 6 (lower is better) Translates to: SMSRLLFVLGET*TTAFTCFGLSR Trigger: TCTGGAAAGTCCAAAACAAGTAAAAGCAGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCCTAGACATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CAA 72 bp | ACATCTTTGGCACCATCAAGAAATCTCTTTAAATTTTaGGTCTGCGCACTGTCAGCAGCCGTTAGTAGCGCA | + |
Preference number: 6 (lower is better) Translates to: TSLAPSRNLFKF*VCALSAAVSSA Trigger: TGCGCTACTAACGGCTGCTGACAGTGCGCAGACCAAAAATTTAAAGAGATTTCTTGATGGTGCCAAAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |
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CDS CCA 72 bp | ACTTCACTATTAGCATGTCTAGGCTTCTCTTTGTCTTaGGAGAGACCTGGACAACTGCTTTTACTTGTTTTG | + |
Preference number: 6 (lower is better) Translates to: TSLLACLGFSLS*ERPGQLLLLVL Trigger: CAAAACAAGTAAAAGCAGTTGTCCAGGTCTCTCCCAAGACAAAGAGAAGCCTAGACATGCTAATAGTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063710.13 ENSMUST00000109155.8 |