Pregenerated sensors for ZFP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049321Ensembl transcript IDs: ENSMUST00000109128.8, ENSMUST00000109129.8, ENSMUST00000116378.8
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCACCAAAGAAAGTCAGGACAGGAACTAAACAAGGCAGGAACCTAGAGGCAGGAATAGCTACTCAAATCTaGATCAAGGGTTCTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: SPKKVRTGTKQGRNLEAGIATQI*IKGSPL Trigger: AAGTGGAGAACCCTTGATTCAGATTTGAGTAGCTAT...TCCTGCCTCTAGGTTCCTGCCTTGTTTAGTTCCTGTCCTGACTTTCTTTGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR-3UTR TCA 90 bp | TCACCAAAGAAAGTCAGGACAGGAACTAAACAAGGCAGGAACCTAGAGGCAGGATCAGATTTCCCAGTGTaGCCAAATACAGCTTCATTA | + |
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Preference number: 2 (lower is better) Translates to: SPKKVRTGTKQGRNLEAGSDFPV*PNTASL Trigger: TAATGAAGCTGTATTTGGTCACACTGGGAAATCTGA...TCCTGCCTCTAGGTTCCTGCCTTGTTTAGTTCCTGTCCTGACTTTCTTTGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCATGCTATGGCATTAAAATATGCACAATTTATCTGCCACCCAGTAGCAACAGTAATTCAGGGATTTaGAGGACAGTAAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TACYGIKICTIYLPPSSNSNSGI*RTVRVR Trigger: TCTGACTCTTACTGTCCTTCAAATCCCTGAATTACT...GTTGCTACTGGGTGGCAGATAAATTGTGCATATTTTAATGCCATAGCATGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAATAGCTACTCAAATCTaGATCAAGGGTTCTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: VQLITITLSIQCEFCDAQIATQI*IKGSPL Trigger: AAGTGGAGAACCCTTGATTCAGATTTGAGTAGCTAT...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAATCAGATTTCCCAGTGTaGCCAAATACAGCTTCATTA | + |
|
Preference number: 2 (lower is better) Translates to: VQLITITLSIQCEFCDAQSDFPV*PNTASL Trigger: TAATGAAGCTGTATTTGGTCACACTGGGAAATCTGA...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR GCA 72 bp | GGAGCTGATGCCATGAGGAGTGCTGCTTGCTCAGCCTaGTTTCTGTATAGAACTCAGGACCATCAGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GADAMRSAACSA*FLYRTQDHQPR Trigger: CCTTGGCTGATGGTCCTGAGTTCTATACAGAAAGCAGGCTGAGCAAGCAGCACTCCTCATGGCATCAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR GCA 72 bp | CTAGAGGCAGGAGCTGATGCCATGAGGAGTGCTGCTTaGTCAGCCTGCTTTCTGTATAGAACTCAGGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LEAGADAMRSAA*SACFLYRTQDH Trigger: ATGGTCCTGAGTTCTATACAGAAAGCAGGCTGAGCAAGCAGCACTCCTCATGGCATCAGCTCCTGCCTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGCATGCTATGGCATTAAAATATGCACAATTTATCTGCCACCCAGTAGCAACTTCGTGTTGGGCATTTaGGATAATATAGATCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TACYGIKICTIYLPPSSNFVLGI*DNIDPT Trigger: TGTAGGATCTATATTATCCAAAATGCCCAACACGAA...GTTGCTACTGGGTGGCAGATAAATTGTGCATATTTTAATGCCATAGCATGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR TCA 72 bp | TACAGCTTCATTATTTATGTCATAGCTACTCAAATCTaGATCAAGGGTTCTCCACTTTCACATGGTTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: YSFIIYVIATQI*IKGSPLSHGYS Trigger: AGAGTAACCATGTGAAAGTGGAGAACCCTTGATTCAGATTTGAGTAGCTATGACATAAATAATGAAGCTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| 3UTR CCA 72 bp | TACTCAAATCTGAATCAAGGGTTCTCCACTTTCACATaGTTACTCTCTATGATTTTATTATCTGCTATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: YSNLNQGFSTFT*LLSMILLSAML Trigger: TAGCATAGCAGATAATAAAATCATAGAGAGTAACCATGTGAAAGTGGAGAACCCTTGATTCAGATTTGAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | TCACCAAAGAAAGTCAGGACAGGAACTAAACAAGGCAGGAACCTAGAGGCAGGAATGCTTAAGCAGGGATaGACTCTGCCTGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPKKVRTGTKQGRNLEAGMLKQG*TLPEGF Trigger: AAAACCTTCAGGCAGAGTTCATCCCTGCTTAAGCAT...TCCTGCCTCTAGGTTCCTGCCTTGTTTAGTTCCTGTCCTGACTTTCTTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | GAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACAGCTTCATTGACAGCCCCCAAAGCTaGATGCCAGAGATCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: EFCDAQIRFPSVTKYSFIDSPQS*MPEIFP Trigger: AGGGAAGATCTCTGGCATTCAGCTTTGGGGGCTGTC...AATGAAGCTGTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATGCTATGGCATTAAAATATGCACAATTTATCTGCCACCCAGTAGCAACGGTGCATGCTTTGGCTaGAGGCTTTGCCACATTGGT | + |
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Preference number: 4 (lower is better) Translates to: TACYGIKICTIYLPPSSNGACFG*RLCHIG Trigger: ACCAATGTGGCAAAGCCTTCAGCCAAAGCATGCACC...GTTGCTACTGGGTGGCAGATAAATTGTGCATATTTTAATGCCATAGCATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR GCA 90 bp | TCACCAAAGAAAGTCAGGACAGGAACTAAACAAGGCAGGAACCTAGAGGCAGGAGTATGGGTTCTCTGGTaGACTGTAAGATTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPKKVRTGTKQGRNLEAGVWVLW*TVRFML Trigger: AAGCATGAATCTTACAGTGCACCAGAGAACCCATAC...TCCTGCCTCTAGGTTCCTGCCTTGTTTAGTTCCTGTCCTGACTTTCTTTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | ATTCAATGTGAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACGACAGCCCCCAAAGCTaGATGCCAGAGATCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQCEFCDAQIRFPSVTKYDSPQS*MPEIFP Trigger: AGGGAAGATCTCTGGCATTCAGCTTTGGGGGCTGTC...GTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTCACATTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | GGTTTATTTGGCTTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGAGACAGCCCCCAAAGCTaGATGCCAGAGATCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFGLHVYITFHHQRKSGDSPQS*MPEIFP Trigger: AGGGAAGATCTCTGGCATTCAGCTTTGGGGGCTGTC...TCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAAGCCAAATAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | ATTTGGCTTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGACAGGAGGTGCATGCTTTGGCTaGAGGCTTTGCCACATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IWLTCLYHFSSPKKVRTGGACFG*RLCHIG Trigger: ACCAATGTGGCAAAGCCTTCAGCCAAAGCATGCACC...TCCTGTCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAAGCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | TCAAATCTGAATCAAGGGTTCTCCACTTTCACATGGTTACTCTCTATGATTTTAGGTGCATGCTTTGGCTaGAGGCTTTGCCACATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNLNQGFSTFTWLLSMILGACFG*RLCHIG Trigger: ACCAATGTGGCAAAGCCTTCAGCCAAAGCATGCACC...TAAAATCATAGAGAGTAACCATGTGAAAGTGGAGAACCCTTGATTCAGATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATGCTATGGCATTAAAATATGCACAATTTATCTGCCACCCAGTAGCAACGGGATGATCTTCCAGTaGAATGCTTTCCACAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TACYGIKICTIYLPPSSNGMIFQ*NAFHRS Trigger: TGATCTGTGGAAAGCATTTCACTGGAAGATCATCCC...GTTGCTACTGGGTGGCAGATAAATTGTGCATATTTTAATGCCATAGCATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR GCA 90 bp | ACAGCATGCTATGGCATTAAAATATGCACAATTTATCTGCCACCCAGTAGCAACGTATGGGTTCTCTGGTaGACTGTAAGATTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TACYGIKICTIYLPPSSNVWVLW*TVRFML Trigger: AAGCATGAATCTTACAGTGCACCAGAGAACCCATAC...GTTGCTACTGGGTGGCAGATAAATTGTGCATATTTTAATGCCATAGCATGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTCATTATTTATGTCATAGCTACTCAAATCTGAATCAAGGGTTCTCCACTATGCTTAAGCAGGGATaGACTCTGCCTGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLHYLCHSYSNLNQGFSTMLKQG*TLPEGF Trigger: AAAACCTTCAGGCAGAGTTCATCCCTGCTTAAGCAT...AGTGGAGAACCCTTGATTCAGATTTGAGTAGCTATGACATAAATAATGAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAATGCTTAAGCAGGGATaGACTCTGCCTGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQLITITLSIQCEFCDAQMLKQG*TLPEGF Trigger: AAAACCTTCAGGCAGAGTTCATCCCTGCTTAAGCAT...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAGGGATGATCTTCCAGTaGAATGCTTTCCACAGATCA | + |
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Preference number: 4 (lower is better) Translates to: VQLITITLSIQCEFCDAQGMIFQ*NAFHRS Trigger: TGATCTGTGGAAAGCATTTCACTGGAAGATCATCCC...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CCA 90 bp | GAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACAGCTTCATTGCATTGATCCCTCAGTaGAAGAGTTCTCAGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: EFCDAQIRFPSVTKYSFIALIPQ*KSSQLY Trigger: ATACAACTGAGAACTCTTCCACTGAGGGATCAATGC...AATGAAGCTGTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CCA 90 bp | ATTCAATGTGAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACCCTGTATGTATCCTCTaGTGCACTATAAGGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: IQCEFCDAQIRFPSVTKYPVCIL*CTIRDE Trigger: CTCATCCCTTATAGTGCACCAGAGGATACATACAGG...GTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTCACATTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | ATTCAATGTGAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACTGGTGTATTAAGCATTaGTCCCTCAGTGGAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: IQCEFCDAQIRFPSVTKYWCIKH*SLSGRV Trigger: AACTCTTCCACTGAGGGATCAATGCTTAATACACCA...GTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTCACATTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTCATTATTTATGTCATAGCTACTCAAATCTGAATCAAGGGTTCTCCACTTGGTGTATTAAGCATTaGTCCCTCAGTGGAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: QLHYLCHSYSNLNQGFSTWCIKH*SLSGRV Trigger: AACTCTTCCACTGAGGGATCAATGCTTAATACACCA...AGTGGAGAACCCTTGATTCAGATTTGAGTAGCTATGACATAAATAATGAAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAGGGATGAGTTCTTTATaGAAGCTTTCCCACACTGAT | + |
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Preference number: 4 (lower is better) Translates to: VQLITITLSIQCEFCDAQGMSSL*KLSHTD Trigger: ATCAGTGTGGGAAAGCTTTCATAAAGAACTCATCCC...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTCATTATTTATGTCATAGCTACTCAAATCTGAATCAAGGGTTCTCCACTGGGATGAGTTCTTTATaGAAGCTTTCCCACACTGAT | + |
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Preference number: 4 (lower is better) Translates to: QLHYLCHSYSNLNQGFSTGMSSL*KLSHTD Trigger: ATCAGTGTGGGAAAGCTTTCATAAAGAACTCATCCC...AGTGGAGAACCCTTGATTCAGATTTGAGTAGCTATGACATAAATAATGAAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | ATTCAATGTGAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACGGTTTGTACTCCTACTaGAGGACTTTCCACATTCAT | + |
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Preference number: 4 (lower is better) Translates to: IQCEFCDAQIRFPSVTKYGLYSY*RTFHIH Trigger: ATGAATGTGGAAAGTCCTTCAGTAGGAGTACAAACC...GTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTCACATTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAGGTTTGTACTCCTACTaGAGGACTTTCCACATTCAT | + |
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Preference number: 4 (lower is better) Translates to: VQLITITLSIQCEFCDAQGLYSY*RTFHIH Trigger: ATGAATGTGGAAAGTCCTTCAGTAGGAGTACAAACC...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR GCA 90 bp | CAGCTTCATTATTTATGTCATAGCTACTCAAATCTGAATCAAGGGTTCTCCACTGTATGGGTTCTCTGGTaGACTGTAAGATTCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: QLHYLCHSYSNLNQGFSTVWVLW*TVRFML Trigger: AAGCATGAATCTTACAGTGCACCAGAGAACCCATAC...AGTGGAGAACCCTTGATTCAGATTTGAGTAGCTATGACATAAATAATGAAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR GCA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAGTATGTATCCTCTGGTaGACTATAAGGGATGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VQLITITLSIQCEFCDAQVCILW*TIRDEF Trigger: GAACTCATCCCTTATAGTGCACCAGAGGATACATAC...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CCA 90 bp | ATTCAATGTGAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACGCATTGATCCCTCAGTaGAAGAGTTCTCAGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: IQCEFCDAQIRFPSVTKYALIPQ*KSSQLY Trigger: ATACAACTGAGAACTCTTCCACTGAGGGATCAATGC...GTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTCACATTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CCA 90 bp | CAGCTTCATTATTTATGTCATAGCTACTCAAATCTGAATCAAGGGTTCTCCACTGCATTGATCCCTCAGTaGAAGAGTTCTCAGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: QLHYLCHSYSNLNQGFSTALIPQ*KSSQLY Trigger: ATACAACTGAGAACTCTTCCACTGAGGGATCAATGC...AGTGGAGAACCCTTGATTCAGATTTGAGTAGCTATGACATAAATAATGAAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CCA 90 bp | TTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGACAGGAACTAAACCCTGTATGTATCCTCTaGTGCACTATAAGGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LHVYITFHHQRKSGQELNPVCIL*CTIRDE Trigger: CTCATCCCTTATAGTGCACCAGAGGATACATACAGG...GTTTAGTTCCTGTCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | TTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGACAGGAACTAAACGGTTTGTACTCCTACTaGAGGACTTTCCACATTCAT | + |
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Preference number: 4 (lower is better) Translates to: LHVYITFHHQRKSGQELNGLYSY*RTFHIH Trigger: ATGAATGTGGAAAGTCCTTCAGTAGGAGTACAAACC...GTTTAGTTCCTGTCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR GCA 90 bp | TTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGACAGGAACTAAACGTATGTATCCTCTGGTaGACTATAAGGGATGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LHVYITFHHQRKSGQELNVCILW*TIRDEF Trigger: GAACTCATCCCTTATAGTGCACCAGAGGATACATAC...GTTTAGTTCCTGTCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | ATTCAATGTGAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACGTGCACTATAAGGGATaGGTTCTTTATGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IQCEFCDAQIRFPSVTKYVHYKG*VLYESF Trigger: AAAGCTTTCATAAAGAACTCATCCCTTATAGTGCAC...GTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTCACATTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | TTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGACAGGAACTAAACGTGCACTATAAGGGATaGGTTCTTTATGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHVYITFHHQRKSGQELNVHYKG*VLYESF Trigger: AAAGCTTTCATAAAGAACTCATCCCTTATAGTGCAC...GTTTAGTTCCTGTCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR TCA 90 bp | TCAAATCTGAATCAAGGGTTCTCCACTTTCACATGGTTACTCTCTATGATTTTAGTGCACTATAAGGGATaGGTTCTTTATGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SNLNQGFSTFTWLLSMILVHYKG*VLYESF Trigger: AAAGCTTTCATAAAGAACTCATCCCTTATAGTGCAC...TAAAATCATAGAGAGTAACCATGTGAAAGTGGAGAACCCTTGATTCAGATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAATTGGGCCACTGTCACTaGGCCCAGGTATCTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VQLITITLSIQCEFCDAQLGHCH*AQVSLL Trigger: CAGGAGAGATACCTGGGCCAAGTGACAGTGGCCCAA...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | ATTTGGCTTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGACAGGATTGGGCCACTGTCACTaGGCCCAGGTATCTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: IWLTCLYHFSSPKKVRTGLGHCH*AQVSLL Trigger: CAGGAGAGATACCTGGGCCAAGTGACAGTGGCCCAA...TCCTGTCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAAGCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | GGTTTATTTGGCTTACATGTCTATATCACTTTTCATCACCAAAGAAAGTCAGGATTGGGCCACTGTCACTaGGCCCAGGTATCTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GLFGLHVYITFHHQRKSGLGHCH*AQVSLL Trigger: CAGGAGAGATACCTGGGCCAAGTGACAGTGGCCCAA...TCCTGACTTTCTTTGGTGATGAAAAGTGATATAGACATGTAAGCCAAATAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | ACAGCATGCTATGGCATTAAAATATGCACAATTTATCTGCCACCCAGTAGCAACATTATAGATTTCCTTTaGGGCCACTGTCACTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TACYGIKICTIYLPPSSNIIDFL*GHCHLA Trigger: GGCCAAGTGACAGTGGCCCAAAAGGAAATCTATAAT...GTTGCTACTGGGTGGCAGATAAATTGTGCATATTTTAATGCCATAGCATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | ACAGCATGCTATGGCATTAAAATATGCACAATTTATCTGCCACCCAGTAGCAACTGGAAGAGTTCTCAGTaGTATTACCTCCACACACAC | + |
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Preference number: 5 (lower is better) Translates to: TACYGIKICTIYLPPSSNWKSSQ*YYLHTH Trigger: GTGTGTGTGGAGGTAATACAACTGAGAACTCTTCCA...GTTGCTACTGGGTGGCAGATAAATTGTGCATATTTTAATGCCATAGCATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | GAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACAGCTTCATTAATGAGATAGGCGCTTaGGCTGAATGCCTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: EFCDAQIRFPSVTKYSFINEIGA*AECLST Trigger: TGTGGAAAGGCATTCAGCCAAAGCGCCTATCTCATT...AATGAAGCTGTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | GAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACAGCTTCATTTGGAAGAGTTCTCAGTaGTATTACCTCCACACACAC | + |
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Preference number: 5 (lower is better) Translates to: EFCDAQIRFPSVTKYSFIWKSSQ*YYLHTH Trigger: GTGTGTGTGGAGGTAATACAACTGAGAACTCTTCCA...AATGAAGCTGTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAAATGAGATAGGCGCTTaGGCTGAATGCCTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: VQLITITLSIQCEFCDAQNEIGA*AECLST Trigger: TGTGGAAAGGCATTCAGCCAAAGCGCCTATCTCATT...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | GTCCAGTTAATCACTATCACATTGTCCATTCAATGTGAATTTTGTGATGCCCAAATTATAGATTTCCTTTaGGGCCACTGTCACTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VQLITITLSIQCEFCDAQIIDFL*GHCHLA Trigger: GGCCAAGTGACAGTGGCCCAAAAGGAAATCTATAAT...TTGGGCATCACAAAATTCACATTGAATGGACAATGTGATAGTGATTAACTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | ATTCAATGTGAATTTTGTGATGCCCAAATCAGATTTCCCAGTGTGACCAAATACTGGAAGAGTTCTCAGTaGTATTACCTCCACACACAC | + |
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Preference number: 5 (lower is better) Translates to: IQCEFCDAQIRFPSVTKYWKSSQ*YYLHTH Trigger: GTGTGTGTGGAGGTAATACAACTGAGAACTCTTCCA...GTATTTGGTCACACTGGGAAATCTGATTTGGGCATCACAAAATTCACATTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS-3UTR CAA 90 bp | TCAAATCTGAATCAAGGGTTCTCCACTTTCACATGGTTACTCTCTATGATTTTAAATGAGATAGGCGCTTaGGCTGAATGCCTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SNLNQGFSTFTWLLSMILNEIGA*AECLST Trigger: TGTGGAAAGGCATTCAGCCAAAGCGCCTATCTCATT...TAAAATCATAGAGAGTAACCATGTGAAAGTGGAGAACCCTTGATTCAGATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS GCA 72 bp | TGGGCCACTGTCACTTGGCCCAGGTATCTCTCCTGTTaGCCCTTTAACCAACAGGTAGGATCCCAGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: WATVTWPRYLSC*PFNQQVGSQTA Trigger: GGCTGTCTGGGATCCTACCTGTTGGTTAAAGGGGCAACAGGAGAGATACCTGGGCCAAGTGACAGTGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS CAA 72 bp | ACCTCCACACACACTCTTCTCATTATAGATTTCCTTTaGGGCCACTGTCACTTGGCCCAGGTATCTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TSTHTLLIIDFL*GHCHLAQVSLL Trigger: CAGGAGAGATACCTGGGCCAAGTGACAGTGGCCCAAAAGGAAATCTATAATGAGAAGAGTGTGTGTGGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS CAA 90 bp | AGTTGTATTACCTCCACACACACTCTTCTCATTATAGATTTCCTTTaGGGCCACTGTCACTTGGCCCAGGTATCTCTCCTGTTGCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SCITSTHTLLIIDFL*GHCHLAQVSLLLPL Trigger: AAGGGGCAACAGGAGAGATACCTGGGCCAAGTGACAGTGGCCCAAAAGGAAATCTATAATGAGAAGAGTGTGTGTGGAGGTAATACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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| CDS TCA 72 bp | AGGTGTCACAGGAATGCTTTGTGGTGTATTAAGCATTaGTCCCTCAGTGGAAGAGTTCTCAGTTGTATTACC | + |
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Preference number: 6 (lower is better) Translates to: RCHRNALWCIKH*SLSGRVLSCIT Trigger: GGTAATACAACTGAGAACTCTTCCACTGAGGGATCAATGCTTAATACACCACAAAGCATTCCTGTGACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109128.8 ENSMUST00000109129.8 ENSMUST00000116378.8 |
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