Pregenerated sensors for ZFP189 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039634Ensembl transcript IDs: ENSMUST00000042964.13, ENSMUST00000107696.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGCACTGCCCACTATTCATAGGATCTTTAGAAACTATTCTTCATaGAGCCAACAAGTATTTGCTTTACCACTATATTTGACCCACGTT | + |
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Preference number: 1 (lower is better) Translates to: QALPTIHRIFRNYSS*SQQVFALPLYLTHV Trigger: AACGTGGGTCAAATATAGTGGTAAAGCAAATACTTGTTGGCTTCATGAAGAATAGTTTCTAAAGATCCTATGAATAGTGGGCAGTGCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTGTTCCCCACAGGCACTaGCCACTATTCATAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: QNFPHMPCPVDSTERLEAVPHRH*PLFIGS Trigger: AGATCCTATGAATAGTGGGCAGTGCCTGTGGGGAAC...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTATATTTGACCCACGTTaGGCCGTATTAAAACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: QNFPHMPCPVDSTERLEAIFDPR*AVLKLH Trigger: GTGCAGTTTTAATACGGCCCAACGTGGGTCAAATAT...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTAAATCTCTGTGGCTATaGAAACAACTAGTAATCGCC | + |
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Preference number: 2 (lower is better) Translates to: QNFPHMPCPVDSTERLEAKSLWL*KQLVIA Trigger: GGCGATTACTAGTTGTTTTCATAGCCACAGAGATTT...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAAGTTCCCCACAGGCACTaGCCACTATTCATAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: NFIELKGNYRRWQHKTFEVPHRH*PLFIGS Trigger: AGATCCTATGAATAGTGGGCAGTGCCTGTGGGGAAC...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR CAA 90 bp | TGGCAACATAAGACTTTTGAATTATTCCTAGCTTCCCAGGATCAGTaGCTCCCTATTCGGTACACTAATTTCACTGTGCCCTTCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: WQHKTFELFLASQDQ*LPIRYTNFTVPFRT Trigger: AGTTCTGAAGGGCACAGTGAAATTAGTGTACCGAATAGGGAGCAACTGATCCTGGGAAGCTAGGAATAATTCAAAAGTCTTATGTTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAACTTCCCAGGATCAGTTaGTCCCTATTCGGTACACTA | + |
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Preference number: 2 (lower is better) Translates to: NFIELKGNYRRWQHKTFELPRIS*SLFGTL Trigger: TAGTGTACCGAATAGGGAGCAACTGATCCTGGGAAG...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAAAAATCTCTGTGGCTATaGAAACAACTAGTAATCGCC | + |
|
Preference number: 2 (lower is better) Translates to: NFIELKGNYRRWQHKTFEKSLWL*KQLVIA Trigger: GGCGATTACTAGTTGTTTTCATAGCCACAGAGATTT...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGCATTTGCTTAGTCACTaGGGTTTGACACGTATAGTC | + |
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Preference number: 2 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLHLLSH*GLTRIV Trigger: GACTATACGTGTCAAACCTCAGTGACTAAGCAAATG...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGATATTTGACCCACGTTaGGCCGTATTAAAACTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLIFDPR*AVLKLH Trigger: GTGCAGTTTTAATACGGCCCAACGTGGGTCAAATAT...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGGGCAACTACAGGAGATaGCAACATAAGACTTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLGNYRR*QHKTFE Trigger: TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCC...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGACTGTTTGGCAACTTTaGAAATATCTGGACTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLTVWQL*KYLDFH Trigger: GTGAAAGTCCAGATATTTTCAAAGTTGCCAAACAGT...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR TCA 72 bp | CATGAAGCCAACAAGTATTTGCTTTACCACTATATTTaGCCCACGTTGGGCCGTATTAAAACTGCACTTTGG | + |
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Preference number: 3 (lower is better) Translates to: HEANKYLLYHYI*PTLGRIKTALW Trigger: CCAAAGTGCAGTTTTAATACGGCCCAACGTGGGTCAAATATAGTGGTAAAGCAAATACTTGTTGGCTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR CCA 72 bp | TCAAACTTCATAGAACTGAAGGGCAACTACAGGAGATaGCAACATAAGACTTTTGAATTATTCCTAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SNFIELKGNYRR*QHKTFELFLAS Trigger: GGAAGCTAGGAATAATTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR TCA 72 bp | TATCTGGACTTTCACAAATTACATTTGCTTAGTCACTaGGGTTTGACACGTATAGTCAAACTTCATAGAACT | + |
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Preference number: 3 (lower is better) Translates to: YLDFHKLHLLSH*GLTRIVKLHRT Trigger: AGTTCTATGAAGTTTGACTATACGTGTCAAACCTCAGTGACTAAGCAAATGTAATTTGTGAAAGTCCAGATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTCCCTTTGATGCTGAATaGAATGGGCCTTGCGGACAA | + |
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Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEAPFDAE*NGPCGQ Trigger: TTGTCCGCAAGGCCCATTTCATTCAGCATCAAAGGG...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTGGCTCCTTCTCTGGCTaGAGCTCTGTTTACACTGAT | + |
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Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEAGSFSG*SSVYTD Trigger: ATCAGTGTAAACAGAGCTTCAGCCAGAGAAGGAGCC...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAAACCCCACTCCTCCTTTaGCTCCAGCGGTGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: NFIELKGNYRRWQHKTFETPLLL*LQRWAW Trigger: CCAAGCCCACCGCTGGAGCCAAAGGAGGAGTGGGGT...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTGTAAGGTTGCAAAGTTaGCTGAAACTTTTCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEAVRLQS*LKLFPH Trigger: GTGCGGGAAAAGTTTCAGTCAACTTTGCAACCTTAC...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR GCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTCTGGGTTTTCACCTCTaGATGGATCTTCTGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEALGFHL*MDLLMV Trigger: AACCATCAGAAGATCCATGCAGAGGTGAAAACCCAG...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTGGTATGTACTTAATCTaGACGCTTTCCCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEAGMYLI*TLSHIH Trigger: GTGAATGTGGGAAAGCGTTCAGATTAAGTACATACC...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTCTTAGTTTCACTGAATaGCGAAGTCTTTTCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEALSFTE*RSLFPD Trigger: ATCAGGGAAAAGACTTCGCCATTCAGTGAAACTAAG...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTCTACCCACAGGATCTTaGTCAATTTCACTTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEALPTGS*SISLLI Trigger: AATCAAAAGTGAAATTGATCAAGATCCTGTGGGTAG...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR GCA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTTTACGGACATTAGTGTaGCCTCTAAATAGTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QNFPHMPCPVDSTERLEALRTLV*PLNSFC Trigger: ACAGAAACTATTTAGAGGGCACACTAATGTCCGTAA...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| 3UTR CAA 72 bp | AAGACTTTTGAATTATTCCTAGCTTCCCAGGATCAGTaGCTCCCTATTCGGTACACTAATTTCACTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KTFELFLASQDQ*LPIRYTNFTVP Trigger: GGGCACAGTGAAATTAGTGTACCGAATAGGGAGCAACTGATCCTGGGAAGCTAGGAATAATTCAAAAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGCCCTTTGATGCTGAATaGAATGGGCCTTGCGGACAA | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLPFDAE*NGPCGQ Trigger: TTGTCCGCAAGGCCCATTTCATTCAGCATCAAAGGG...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGGGCTCCTTCTCTGGCTaGAGCTCTGTTTACACTGAT | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLGSFSG*SSVYTD Trigger: ATCAGTGTAAACAGAGCTTCAGCCAGAGAAGGAGCC...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAACGTAGCTGTCCATCATaGCATCTTTATACAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: NFIELKGNYRRWQHKTFERSCPS*HLYTGF Trigger: GAAGCCTGTATAAAGATGTCATGATGGACAGCTACG...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAAGGTTGCAAAGTTGACTaGAACTTTTCCCGCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: NFIELKGNYRRWQHKTFEGCKVD*NFSRTL Trigger: AAGAGTGCGGGAAAAGTTTCAGTCAACTTTGCAACC...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAAGTAAGGTTGCAAAGTTaGCTGAAACTTTTCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: NFIELKGNYRRWQHKTFEVRLQS*LKLFPH Trigger: GTGCGGGAAAAGTTTCAGTCAACTTTGCAACCTTAC...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGGGAATGAGCTCCGACTaGAACTCTTTCCACATTCAA | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLGMSSD*NSFHIQ Trigger: TTGAATGTGGAAAGAGTTTCAGTCGGAGCTCATTCC...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGGGTTGCAAAGTTGACTaGAACTTTTCCCGCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLGCKVD*NFSRTL Trigger: AAGAGTGCGGGAAAAGTTTCAGTCAACTTTGCAACC...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAAACAAGGCTGCGCTGTTaGCTAAAACTTTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: NFIELKGNYRRWQHKTFETRLRC*LKLLSH Trigger: ATGTGACAAAAGTTTTAGTCAACAGCGCAGCCTTGT...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR GCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGCTGGGTTTTCACCTCTaGATGGATCTTCTGATGGTT | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLLGFHL*MDLLMV Trigger: AACCATCAGAAGATCCATGCAGAGGTGAAAACCCAG...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGACAAGGCTGCGCTGTTaGCTAAAACTTTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLTRLRC*LKLLSH Trigger: ATGTGACAAAAGTTTTAGTCAACAGCGCAGCCTTGT...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CCA 90 bp | AACTTCATAGAACTGAAGGGCAACTACAGGAGATGGCAACATAAGACTTTTGAACTTAGTTTCACTGAATaGCGAAGTCTTTTCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: NFIELKGNYRRWQHKTFELSFTE*RSLFPD Trigger: ATCAGGGAAAAGACTTCGCCATTCAGTGAAACTAAG...TTCAAAAGTCTTATGTTGCCATCTCCTGTAGTTGCCCTTCAGTTCTATGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGAACTATTACACCCTGTaGCTCGATATCTTTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLNYYTL*LDIFLK Trigger: CTTGAGAAAGATATCGAGCCACAGGGTGTAATAGTT...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR TCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGCTACCCACAGGATCTTaGTCAATTTCACTTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLLPTGS*SISLLI Trigger: AATCAAAAGTGAAATTGATCAAGATCCTGTGGGTAG...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR GCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGTTACGGACATTAGTGTaGCCTCTAAATAGTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLLRTLV*PLNSFC Trigger: ACAGAAACTATTTAGAGGGCACACTAATGTCCGTAA...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CCA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGAACCAGACTGCAGTTTaGATCAAAACTTTCCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLNQTAV*IKTFLS Trigger: ACTAAGGAAAGTTTTGATCCAAACTGCAGTCTGGTT...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CAA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTAACCCCACTCCTCCTTaGGCTCCAGCGGTGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: QNFPHMPCPVDSTERLEANPTPP*APAVGL Trigger: CAAGCCCACCGCTGGAGCCAAAGGAGGAGTGGGGTT...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGAACCCCACTCCTCCTTaGGCTCCAGCGGTGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLNPTPP*APAVGL Trigger: CAAGCCCACCGCTGGAGCCAAAGGAGGAGTGGGGTT...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CAA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTGACAAGGCTGCGCTGTaGACTAAAACTTTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: QNFPHMPCPVDSTERLEADKAAL*TKTFVT Trigger: TGTGACAAAAGTTTTAGTCAACAGCGCAGCCTTGTC...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CAA 90 bp | CAGAACTTTCCTCATATGCCTTGCCCAGTCGACTCTACTGAAAGGTTAGAGGCTGTTCTTCTTTCACAGTaGGCTCTTCATCTTTATTTC | + |
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Preference number: 5 (lower is better) Translates to: QNFPHMPCPVDSTERLEAVLLSQ*ALHLYF Trigger: GAAATAAAGATGAAGAGCCAACTGTGAAAGAAGAAC...AGCCTCTAACCTTTCAGTAGAGTCGACTGGGCAAGGCATATGAGGAAAGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGGACAAGGCTGCGCTGTaGACTAAAACTTTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLDKAAL*TKTFVT Trigger: TGTGACAAAAGTTTTAGTCAACAGCGCAGCCTTGTC...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGGCTACCCACAGGATCTaGATCAATTTCACTTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLATHRI*INFTFD Trigger: ATCAAAAGTGAAATTGATCAAGATCCTGTGGGTAGC...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTACTGGAGCTCCAAACTTTCACCAACTAATTTTCCATACAAATTTCTTGGTTCTTCTTTCACAGTaGGCTCTTCATCTTTATTTC | + |
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Preference number: 5 (lower is better) Translates to: GSTGAPNFHQLIFHTNFLVLLSQ*ALHLYF Trigger: GAAATAAAGATGAAGAGCCAACTGTGAAAGAAGAAC...CAAGAAATTTGTATGGAAAATTAGTTGGTGAAAGTTTGGAGCTCCAGTACTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS CCA 72 bp | AGGGGAGACTTCCTGCTGTATAACCAGACTGCAGTTTaGATCAAAACTTTCCTTAGTTTCACTGAATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RGDFLLYNQTAV*IKTFLSFTEWR Trigger: TCGCCATTCAGTGAAACTAAGGAAAGTTTTGATCCAAACTGCAGTCTGGTTATACAGCAGGAAGTCTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS GCA 72 bp | TTCTCTTCTGAAGTTGGTCTCTTACGGACATTAGTGTaGCCTCTAAATAGTTTCTGTTCCTCACTCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: FSSEVGLLRTLV*PLNSFCSSLRE Trigger: CTCTCTGAGTGAGGAACAGAAACTATTTAGAGGGCACACTAATGTCCGTAAGAGACCAACTTCAGAAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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| CDS CCA 72 bp | GCAGTTTGGATCAAAACTTTCCTTAGTTTCACTGAATaGCGAAGTCTTTTCCCTGATATGGATTCTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: AVWIKTFLSFTE*RSLFPDMDSLV Trigger: CACCAGAGAATCCATATCAGGGAAAAGACTTCGCCATTCAGTGAAACTAAGGAAAGTTTTGATCCAAACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042964.13 ENSMUST00000107696.2 |
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