Pregenerated sensors for ZFP185 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031351Ensembl transcript IDs: ENSMUST00000114546.9, ENSMUST00000134588.3, ENSMUST00000164800.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCGTAGTGTTTCAAGGAGGGACCCAAGAAGCCCAGAGATGGGGTaGATTTCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: YRSVSRRDPRSPEMG*ISHFSKPFLTLRFR Trigger: CCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGAAATTCACCCCATCTCTGGGCTTCTTGGGTCCCTCCTTGAAACACTACGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CCA 90 bp | ATTAGAAAACATGTCTCAGGGAGGTCAAAGTGGACTCATTCATCCTaGAAGCAAGGAACTGAGATATTCCTAAGGTATAAAAGGCTACAC | + |
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Preference number: 1 (lower is better) Translates to: IRKHVSGRSKWTHSS*KQGTEIFLRYKRLH Trigger: GTGTAGCCTTTTATACCTTAGGAATATCTCAGTTCCTTGCTTCCAGGATGAATGAGTCCACTTTGACCTCCCTGAGACATGTTTTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CCA 90 bp | GAGATATTCCTAAGGTATAAAAGGCTACACAAAATCATAACATCATaGCTACACAATCTTAGATGTATGCTCCTTCCGCACAAGGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: EIFLRYKRLHKIITS*LHNLRCMLLPHKVG Trigger: GCCTACCTTGTGCGGAAGGAGCATACATCTAAGATTGTGTAGCCATGATGTTATGATTTTGTGTAGCCTTTTATACCTTAGGAATATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CCA 90 bp | ATAGCAAGCTTTTCTTTGAGAAGTTACATAAGCCAAATTCGTCTCTaGGTGAAAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTA | + |
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Preference number: 1 (lower is better) Translates to: IASFSLRSYISQIRL*VKDSGGEGKGAIKL Trigger: TAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTTTCACCCAGAGACGAATTTGGCTTATGTAACTTCTCAAAGAAAAGCTTGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCCTGGGTGAAAGACTCTaGAGGAGAGGGAAAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TKCCTIRAESLLDVSLDSLGERL*RRGKGS Trigger: GCTCCCTTTCCCTCTCCTCCAGAGTCTTTCACCCAG...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCCAAGAAGCCCAGAGATaGGGTGAATTTCACACTTTT | + |
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Preference number: 2 (lower is better) Translates to: TKCCTIRAESLLDVSLDSQEAQR*GEFHTF Trigger: AAAAGTGTGAAATTCACCCCATCTCTGGGCTTCTTG...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CAA 90 bp | TATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTTTaGGCTTGGGCTCTCAGAAGCCTCAGAAAGTCTGCATACGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: YLMPVISLPGIVNSF*AWALRSLRKSAYAD Trigger: ATCAGCGTATGCAGACTTTCTGAGGCTTCTGAGAGCCCAAGCCAAAAAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGAACCTGCCTCTGCTGTaGCAGACATCAACTGGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLSQSNKEASILHSQVLRNLPLL*QTSTGS Trigger: ACTACCAGTTGATGTCTGGCACAGCAGAGGCAGGTT...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGCATGGAGGATGTAAGTaGCGAGGAGCCAACAATTTG | + |
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Preference number: 2 (lower is better) Translates to: LLSQSNKEASILHSQVLRHGGCK*RGANNL Trigger: CAAATTGTTGGCTCCTCGTCACTTACATCCTCCATG...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGTGGACTCATTCATCCTaGAAGCAAGGAACTGAGATA | + |
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Preference number: 2 (lower is better) Translates to: KTLEEREREQLNYRSVSRWTHSS*KQGTEI Trigger: TATCTCAGTTCCTTGCTTCCAGGATGAATGAGTCCA...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR CCA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTTCAGGGAGGTCAAAGTaGACTCATTCATCCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QPLVFNACNFPTRDRQQFSGRSK*THSSWK Trigger: CTTCCAGGATGAATGAGTCCACTTTGACCTCCCTGA...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCATGGAGGATGTAAGTaGCGAGGAGCCAACAATTTG | + |
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Preference number: 2 (lower is better) Translates to: SHFSKPFLTLRFREIFHSHGGCK*RGANNL Trigger: CAAATTGTTGGCTCCTCGTCACTTACATCCTCCATG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR TCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCACATACACACAAAGTaGATAGACAAGCTAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: KTLEEREREQLNYRSVSRHIHTK*IDKLNS Trigger: ACTGTTTAGCTTGTCTATTCACTTTGTGTGTATGTG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGTGGACTCATTCATCCTaGAAGCAAGGAACTGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: LLSQSNKEASILHSQVLRWTHSS*KQGTEI Trigger: TATCTCAGTTCCTTGCTTCCAGGATGAATGAGTCCA...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGTACTTGACGTTTCACTaGATAGCAAGCTTTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLSQSNKEASILHSQVLRYLTFH*IASFSL Trigger: CAAAGAAAAGCTTGCTATCCAGTGAAACGTCAAGTA...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CCA 72 bp | ACCATGGAGGATGTAAGTGACGAGGAGCCAACAATTTaGGTCAACTGGACAGCCAAATACAGCTGGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: TMEDVSDEEPTI*VNWTAKYSWGS Trigger: TGATCCCCAGCTGTATTTGGCTGTCCAGTTGACCCAAATTGTTGGCTCCTCGTCACTTACATCCTCCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR GCA 72 bp | GACAGATTCAGGACTAGAAAACAGGTCACAAAATGCTaGACGATCAGGGCAGAGAGCCTACTTGACGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: DRFRTRKQVTKC*TIRAESLLDVS Trigger: TGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGTGACCTGTTTTCTAGTCCTGAATCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CCA 72 bp | GCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTaGATAGCAAGCTTTTCTTTGAGAAGTTACATAAGC | + |
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Preference number: 3 (lower is better) Translates to: ARSGQRAYLTFH*IASFSLRSYIS Trigger: GCTTATGTAACTTCTCAAAGAAAAGCTTGCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR TCA 72 bp | GTTTCAAGGAGGGACCCAAGAAGCCCAGAGATGGGGTaGATTTCACACTTTTCAAAGCCATTTCTAACACTA | + |
|
Preference number: 3 (lower is better) Translates to: VSRRDPRSPEMG*ISHFSKPFLTL Trigger: TAGTGTTAGAAATGGCTTTGAAAAGTGTGAAATTCACCCCATCTCTGGGCTTCTTGGGTCCCTCCTTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CCA 72 bp | CATGTCTCAGGGAGGTCAAAGTGGACTCATTCATCCTaGAAGCAAGGAACTGAGATATTCCTAAGGTATAAA | + |
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Preference number: 3 (lower is better) Translates to: HVSGRSKWTHSS*KQGTEIFLRYK Trigger: TTTATACCTTAGGAATATCTCAGTTCCTTGCTTCCAGGATGAATGAGTCCACTTTGACCTCCCTGAGACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR CCA 72 bp | CTAAGGTATAAAAGGCTACACAAAATCATAACATCATaGCTACACAATCTTAGATGTATGCTCCTTCCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LRYKRLHKIITS*LHNLRCMLLPH Trigger: GTGCGGAAGGAGCATACATCTAAGATTGTGTAGCCATGATGTTATGATTTTGTGTAGCCTTTTATACCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR TCA 72 bp | TCAAATTTAAACCTGGGTAAACTTTCCAACATGTGCTaGCATACCTTACTGGAAAAACCAAAGGAGAATGGA | + |
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Preference number: 3 (lower is better) Translates to: SNLNLGKLSNMC*HTLLEKPKENG Trigger: TCCATTCTCCTTTGGTTTTTCCAGTAAGGTATGTCAGCACATGTTGGAAAGTTTACCCAGGTTTAAATTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| 3UTR TCA 72 bp | AGAAGTCTCAAGAAACCGTATCTGTTTTCTTTACCCTaGTTTACACACATTAAAAGCTGTTCAGAGGATAAA | + |
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Preference number: 3 (lower is better) Translates to: RSLKKPYLFSLP*FTHIKSCSEDK Trigger: TTTATCCTCTGAACAGCTTTTAATGTGTGTAAATCAGGGTAAAGAAAACAGATACGGTTTCTTGAGACTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCGCTGCTCGGCTCCACTaGGGCTACCCTGTGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSAARLH*GYPVAL Trigger: TAGAGCCACAGGGTAGCCCCAGTGGAGCCGAGCAGC...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR GCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCTGGGACCTCCGTTTCTaGTCATCTGGGGTGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSWDLRF*SSGVNG Trigger: GCCATTCACCCCAGATGAGCAGAAACGGAGGTCCCA...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR GCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCCCTCAGAACACCAAGTaGAGCCTGGGACCTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSPQNTK*SLGPPF Trigger: AAACGGAGGTCCCAGGCTGCACTTGGTGTTCTGAGG...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCAGGGCTTCCAGGTCTaGGGCCACCAGGTGGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRQGFQV*GHQVEF Trigger: GAACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCGGAGTCCACCTTGCTTaGGACACCAGGAACACACAA | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSGVHLA*DTRNTQ Trigger: TTGTGTGTTCCTGGTGTCTCAAGCAAGGTGGACTCC...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR GCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCCACAAGAATCTGGAGTaGTCAGGGCTTCCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSHKNLE*SGLPGL Trigger: CAGACCTGGAAGCCCTGAGCACTCCAGATTCTTGTG...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCCTCATCTGGGGTGAATaGCACCTCCTCTTCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSLIWGE*HLLFLS Trigger: ACTGAGGAAGAGGAGGTGCCATTCACCCCAGATGAG...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCGGGCGATGCTGGGAGTaGGAAGAGCTATCTATTGTT | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSGRCWE*EELSIV Trigger: AACAATAGATAGCTCTTCTCACTCCCAGCATCGCCC...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCAGTGACCATGCAGCTTaGAGGGCTCATCAGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSSDHAA*RAHQHV Trigger: AACATGCTGATGAGCCCTTCAAGCTGCATGGTCACT...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCCCCAGAAGCACTTCTTaGAGCTCCGTTGGTCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSPRSTS*SSVGLR Trigger: TCTAAGACCAACGGAGCTCCAAGAAGTGCTTCTGGG...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCAATCCCTTTGATAGTTaGGCTGGAGTCCACCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSNPFDS*AGVHLA Trigger: AGCAAGGTGGACTCCAGCTCAACTATCAAAGGGATT...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCTTGGTGATCCAGCTCTaGTCACCCTTTAGTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSLVIQL*SPFSVV Trigger: GACTACACTAAAGGGTGACCAGAGCTGGATCACCAA...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCCGTTTCTGCTCATCTaGGGTGAATGGCACCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRPFLLI*GEWHLL Trigger: GAGGAGGTGCCATTCACCCCAGATGAGCAGAAACGG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCTGGTGTCACGGTGAATaGAGATCTGATCTAGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSWCHGE*RSDLGD Trigger: ATCTCCTAGATCAGATCTTCATTCACCGTGACACCA...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR GCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGGCAAGGAATGGCGACTaGAGCTCCTGGGTCGGACTA | + |
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Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRARNGD*SSWVGL Trigger: TAGTCCGACCCAGGAGCTGCAGTCGCCATTCCTTGC...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114546.9 |
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| CDS-3UTR CCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCAGGGCTTCCAGGTCTaGGGCCACCAGGTGGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSQGFQV*GHQVEF Trigger: GAACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCTCCTCACAAGAATCTaGAGTGCTCAGGGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRLLTRI*SAQGFQ Trigger: CTGGAAGCCCTGAGCACTCCAGATTCTTGTGAGGAG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTGCTGCTCGGCTCCACTaGGGCTACCCTGTGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSAARLH*GYPVAL Trigger: TAGAGCCACAGGGTAGCCCCAGTGGAGCCGAGCAGC...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGGGGACTGTCACAGTGTaGAGACACTGGCTTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRGTVTV*RHWLPR Trigger: TCTGGGAAGCCAGTGTCTTCACACTGTGACAGTCCC...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCTTTGCCAGATCCAATaGGTCTTCAATGCTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRLCQIQ*VFNAAG Trigger: CCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR GCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTGCAAGGAATGGCGACTaGAGCTCCTGGGTCGGACTG | + |
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Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSARNGD*SSWVGL Trigger: CAGTCCGACCCAGGAGCTGCAGTCGCCATTCCTTGC...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCTCCTCTTCACCAGATaGTACAGTTCTCCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRLLFTR*YSSPFP Trigger: GGGAAAGGGAGAACTGTACCATCTGGTGAAGAGGAG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCCCAGAAGCACTTCTTaGAGCTCCGTTGGTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRPRSTS*SSVGLR Trigger: TCTAAGACCAACGGAGCTCCAAGAAGTGCTTCTGGG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGCCGTTTCTGCTCATCTaGGGTGAATGGCACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRPFLLI*GEWHLL Trigger: GAGGAGGTGCCATTCACCCCAGATGAGCAGAAACGG...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGTCTTGCCAGAGCAGGTaGTTCCTGGTTTTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRSCQSR*FLVFLR Trigger: CCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGA...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR GCA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTTTAGCTGCTCCCAGCTaGCCAGAAGCACTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVFNACNFPTRDRQQFLAAPS*PEALLG Trigger: TCCAAGAAGTGCTTCTGGGCAGCTGGGAGCAGCTAA...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGTTAGCTGCTCCCAGCTaGCCAGAAGCACTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRLAAPS*PEALLG Trigger: TCCAAGAAGTGCTTCTGGGCAGCTGGGAGCAGCTAA...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGCTCATCTGGGGTGAATaGCACCTCCTCTTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRLIWGE*HLLFLS Trigger: ACTGAGGAAGAGGAGGTGCCATTCACCCCAGATGAG...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGCTCCTCACAAGAATCTaGAGTGCTCAGGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRLLTRI*SAQGFQ Trigger: CTGGAAGCCCTGAGCACTCCAGATTCTTGTGAGGAG...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGCTGAGAAGCCACAGTTaGGTCACTTTGTCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRLRSHS*VTLSIL Trigger: CAAGATGGACAAAGTGACCCAACTGTGGCTTCTCAG...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCCAGAAGACACTTCACTaGTATTCATGTACTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKCCTIRAESLLDVSLDSQKTLH*YSCTPS Trigger: TGAAGGAGTACATGAATACCAGTGAAGTGTCTTCTG...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGACAGACCCCTTCGGTTaGTCTCTCAGAAGGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRTDPFG*SLRRST Trigger: GGTACTCCTTCTGAGAGACCAACCGAAGGGGTCTGT...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR TCA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTAGTGACCATGCAGCTTaGAGGGCTCATCAGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPLVFNACNFPTRDRQQFSDHAA*RAHQHV Trigger: AACATGCTGATGAGCCCTTCAAGCTGCATGGTCACT...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR TCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTGGGACTGTCACAGTGTaGAGACACTGGCTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSGTVTV*RHWLPR Trigger: TCTGGGAAGCCAGTGTCTTCACACTGTGACAGTCCC...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR GCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCCTCAGAACACCAAGTaGAGCCTGGGACCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSPQNTK*SLGPPF Trigger: AAACGGAGGTCCCAGGCTGCACTTGGTGTTCTGAGG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGGTGAGAGTGGCTCTATaGTATGATCCTCAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRVRVAL*YDPQSH Trigger: ATGACTCTGAGGATCATACCATAGAGCCACTCTCAC...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTAATCCCTTTGATAGTTaGGCTGGAGTCCACCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPLVFNACNFPTRDRQQFNPFDS*AGVHLA Trigger: AGCAAGGTGGACTCCAGCTCAACTATCAAAGGGATT...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGGTCTTAGGATATTATTaGGCTCCTCTTCACCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KTLEEREREQLNYRSVSRVLGYY*APLHQM Trigger: CATCTGGTGAAGAGGAGCGCAATAATATCCTAAGAC...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR GCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCACAAGAATCTGGAGTaGTCAGGGCTTCCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSHKNLE*SGLPGL Trigger: CAGACCTGGAAGCCCTGAGCACTCCAGATTCTTGTG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGGATGATCTTGGGGGCTaGATTGTTCTCCTCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRDDLGG*IVLLTR Trigger: TCTTGTGAGGAGAACAATGCAGCCCCCAAGATCATC...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGAGGAGTACCTTCATGTaGGGCTTTCTTTGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLSQSNKEASILHSQVLRRSTFM*GFLCQI Trigger: GATCTGGCAAAGAAAGCCCCACATGAAGGTACTCCT...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTAGGAGTACCTTCATGTaGGGCTTTCTTTGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVFNACNFPTRDRQQFRSTFM*GFLCQI Trigger: GATCTGGCAAAGAAAGCCCCACATGAAGGTACTCCT...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTACAGACCCCTTCGGTTaGTCTCTCAGAAGGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSTDPFG*SLRRST Trigger: GGTACTCCTTCTGAGAGACCAACCGAAGGGGTCTGT...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTCATTTGATTCGTCTCTaGCTGATGAGAAGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLVFNACNFPTRDRQQFHLIRL*LMRRMW Trigger: CCACATCCTTCTCATCAGTCAGAGACGAATCAAATG...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCTTTGCCAGATCCAATaGGTCTTCAATGCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSLCQIQ*VFNAAG Trigger: CCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCTCCTCTTCACCAGATaGTACAGTTCTCCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSLLFTR*YSSPFP Trigger: GGGAAAGGGAGAACTGTACCATCTGGTGAAGAGGAG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTTTGGTGATCCAGCTCTaGTCACCCTTTAGTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSLVIQL*SPFSVV Trigger: GACTACACTAAAGGGTGACCAGAGCTGGATCACCAA...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCTGAGAAGCCACAGTTaGGTCACTTTGTCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSLRSHS*VTLSIL Trigger: CAAGATGGACAAAGTGACCCAACTGTGGCTTCTCAG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR TCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTCATTTGATTCGTCTCTaGCTGATGAGAAGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSHLIRL*LMRRMW Trigger: CCACATCCTTCTCATCAGTCAGAGACGAATCAAATG...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CCA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTCAGAAGACACTTCACTaGTATTCATGTACTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVFNACNFPTRDRQQFQKTLH*YSCTPS Trigger: TGAAGGAGTACATGAATACCAGTGAAGTGTCTTCTG...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR GCA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTGTCTTAGGATATTATTaGGCTCCTCTTCACCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSKPFLTLRFREIFHSVLGYY*APLHQM Trigger: CATCTGGTGAAGAGGAGCGCAATAATATCCTAAGAC...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS TCA 90 bp | GAACACCAAGTGCAGCCTGGGACCTCCGTTTCTGCTCATCTGGGGTaGATGGCACCTCCTCTTCCTCAGTCCCTGATATGGAGCTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EHQVQPGTSVSAHLG*MAPPLPQSLIWSCA Trigger: GGCGCAGCTCCATATCAGGGACTGAGGAAGAGGAGGTGCCATTCACCCCAGATGAGCAGAAACGGAGGTCCCAGGCTGCACTTGGTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS GCA 90 bp | GGCAATCTTCTCGGTTGTCGAGCTGCTTCGGCCAGGATCAGGTCTTaGCAGAGCAGGTGGTTCCTGGTTTTTCTCAGGAAGGACGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GNLLGCRAASARIRS*QSRWFLVFLRKDVL Trigger: GAGGACGTCCTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCCGAAGCAGCTCGACAACCGAGAAGATTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CCA 90 bp | GGTTGTCGAGCTGCTTCGGCCAGGATCAGGTCTTGCCAGAGCAGGTaGTTCCTGGTTTTTCTCAGGAAGGACGTCCTCATCTACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: GCRAASARIRSCQSR*FLVFLRKDVLIYHI Trigger: GATGTGGTAGATGAGGACGTCCTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCCGAAGCAGCTCGACAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CCA 90 bp | TTCCTTGATGATCTTGGGGGCTGCATTGTTCTCCTCACAAGAATCTaGAGTGCTCAGGGCTTCCAGGTCTGGGGCCACCAGGTGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLDDLGGCIVLLTRI*SAQGFQVWGHQVEF Trigger: GAACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTGAGCACTCCAGATTCTTGTGAGGAGAACAATGCAGCCCCCAAGATCATCAAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CCA 90 bp | GAGCTGCTTCGGCCAGGATCAGGTCTTGCCAGAGCAGGTGGTTCCTaGTTTTTCTCAGGAAGGACGTCCTCATCTACCACATCAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ELLRPGSGLARAGGS*FFSGRTSSSTTSTL Trigger: AAGGGTTGATGTGGTAGATGAGGACGTCCTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCCGAAGCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGGGCCAGGATCAGGTCTaGCCAGAGCAGGTGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTLEEREREQLNYRSVSRGQDQV*PEQVVP Trigger: AGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCC...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS GCA 90 bp | CTTCATGTGGGGCTTTCTTTGCCAGATCCAATGAGTCTTCAATGCTaGTGGGACTGTCACAGTGTGAAGACACTGGCTTCCCAGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LHVGLSLPDPMSLQC*WDCHSVKTLASQKT Trigger: TGTCTTCTGGGAAGCCAGTGTCTTCACACTGTGACAGTCCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAGAAAGCCCCACATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS CCA 90 bp | CATGTGGGGCTTTCTTTGCCAGATCCAATGAGTCTTCAATGCTGCTaGGACTGTCACAGTGTGAAGACACTGGCTTCCCAGAAGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: HVGLSLPDPMSLQCC*DCHSVKTLASQKTL Trigger: AAGTGTCTTCTGGGAAGCCAGTGTCTTCACACTGTGACAGTCCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAGAAAGCCCCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCGCTGAGAAGCCACAGTaGGGTCACTTTGTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TKCCTIRAESLLDVSLDSAEKPQ*GHFVHL Trigger: AAGATGGACAAAGTGACCCAACTGTGGCTTCTCAGC...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS TCA 90 bp | GTTGAGCTGGAGTCCACCTTGCTTGAGACACCAGGAACACACAATTaGGATTGTTCAGAGGTGTCAGAGATGGTAACAGTGACCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VELESTLLETPGTHN*DCSEVSEMVTVTMQ Trigger: CTGCATGGTCACTGTTACCATCTCTGACACCTCTGAACAATCTCAATTGTGTGTTCCTGGTGTCTCAAGCAAGGTGGACTCCAGCTCAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS CCA 90 bp | ACAATCTTGGATCTCATGGCTACAGTAAGTACAGACCCCTTCGGTTaGTCTCTCAGAAGGAGTACCTTCATGTGGGGCTTTCTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TILDLMATVSTDPFG*SLRRSTFMWGFLCQ Trigger: CTGGCAAAGAAAGCCCCACATGAAGGTACTCCTTCTGAGAGACCAACCGAAGGGGTCTGTACTTACTGTAGCCATGAGATCCAAGATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCATCTTGGGGGCTGCATaGTTCTCCTCACAAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: TKCCTIRAESLLDVSLDSILGAA*FSSQES Trigger: AGATTCTTGTGAGGAGAACAATGCAGCCCCCAAGAT...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS TCA 90 bp | AGATTGTTCAGAGGTGTCAGAGATGGTAACAGTGACCATGCAGCTTaGAGGGCTCATCAGCATGTTAGTACAGTCCTCGGCTTTGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLFRGVRDGNSDHAA*RAHQHVSTVLGFDL Trigger: CAAATCAAAGCCGAGGACTGTACTAACATGCTGATGAGCCCTTCAAGCTGCATGGTCACTGTTACCATCTCTGACACCTCTGAACAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
||
| CDS-3UTR CAA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTGGCCAGGATCAGGTCTaGCCAGAGCAGGTGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHFSKPFLTLRFREIFHSGQDQV*PEQVVP Trigger: AGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCC...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGGCTGAGAAGCCACAGTaGGGTCACTTTGTCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: KTLEEREREQLNYRSVSRAEKPQ*GHFVHL Trigger: AAGATGGACAAAGTGACCCAACTGTGGCTTCTCAGC...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS TCA 90 bp | AGAGCTTCTCATAGCATTTCCCACAGTGGATGGTGTCACGGTGAATaGAGATCTGATCTAGGAGATCACCCATCGGTTTATTGCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: RASHSISHSGWCHGE*RSDLGDHPSVYCKS Trigger: GGATTTGCAATAAACCGATGGGTGATCTCCTAGATCAGATCTTCATTCACCGTGACACCATCCACTGTGGGAAATGCTATGAGAAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | TCACACTTTTCAAAGCCATTTCTAACACTACGCTTCAGGGAAATATTTCACAGTAACCAGCTGGAGCCCTaGCGTTTGGAGACCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHFSKPFLTLRFREIFHSNQLEP*RLETWH Trigger: ATGCCAGGTCTCCAAACGCAAGGGCTCCAGCTGGTT...ACTGTGAAATATTTCCCTGAAGCGTAGTGTTAGAAATGGCTTTGAAAAGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGGCTGAGATCTGCAAGTaGCTGAGAAGCCACAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LLSQSNKEASILHSQVLRAEICK*LRSHSW Trigger: CCAACTGTGGCTTCTCAGCAACTTGCAGATCTCAGC...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTGCTGAGATCTGCAAGTaGCTGAGAAGCCACAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: QPLVFNACNFPTRDRQQFAEICK*LRSHSW Trigger: CCAACTGTGGCTTCTCAGCAACTTGCAGATCTCAGC...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | ACAAAATGCTGCACGATCAGGGCAGAGAGCCTACTTGACGTTTCACTGGATAGCAACACACAATTGAGATaGTTCAGAGGTGTCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TKCCTIRAESLLDVSLDSNTQLR*FRGVRD Trigger: ATCTCTGACACCTCTGAACAATCTCAATTGTGTGTT...GCTATCCAGTGAAACGTCAAGTAGGCTCTCTGCCCTGATCGTGCAGCATTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGTCAGAGTCATCATGCTaGGTGATCCAGCTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSQSNKEASILHSQVLRSESSC*VIQLWS Trigger: TGACCAGAGCTGGATCACCAAGCATGATGACTCTGA...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGACCAGGAACACACAATaGAGATTGTTCAGAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KTLEEREREQLNYRSVSRTRNTQ*RLFRGV Trigger: GACACCTCTGAACAATCTCAATTGTGTGTTCCTGGT...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | AAGACTCTGGAGGAGAGGGAAAGGGAGCAATTAAATTACCGTAGTGTTTCAAGGTCACCCATCGGTTTATaGCAAATCCCGCACTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KTLEEREREQLNYRSVSRSPIGL*QIPHLK Trigger: TTTTAAGTGCGGGATTTGCAATAAACCGATGGGTGA...CCTTGAAACACTACGGTAATTTAATTGCTCCCTTTCCCTCTCCTCCAGAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | CTTCTAAGTCAATCCAACAAAGAAGCCTCAATTTTGCATTCCCAAGTCTTGAGGTCACCCATCGGTTTATaGCAAATCCCGCACTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLSQSNKEASILHSQVLRSPIGL*QIPHLK Trigger: TTTTAAGTGCGGGATTTGCAATAAACCGATGGGTGA...CCTCAAGACTTGGGAATGCAAAATTGAGGCTTCTTTGTTGGATTGACTTAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS-3UTR CAA 90 bp | CAACCCTTAGTATTTAATGCCTGTAATTTCCCTACCAGGGATCGTCAACAGTTTAACACACAATTGAGATaGTTCAGAGGTGTCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPLVFNACNFPTRDRQQFNTQLR*FRGVRD Trigger: ATCTCTGACACCTCTGAACAATCTCAATTGTGTGTT...AAACTGTTGACGATCCCTGGTAGGGAAATTACAGGCATTAAATACTAAGGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS GCA 72 bp | TGGGGGCTGCATTGTTCTCCTCACAAGAATCTGGAGTaGTCAGGGCTTCCAGGTCTGGGGCCACCAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WGLHCSPHKNLE*SGLPGLGPPGG Trigger: TCCACCTGGTGGCCCCAGACCTGGAAGCCCTGAGCACTCCAGATTCTTGTGAGGAGAACAATGCAGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CCA 72 bp | GATCTTGGGGGCTGCATTGTTCTCCTCACAAGAATCTaGAGTGCTCAGGGCTTCCAGGTCTGGGGCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLGGCIVLLTRI*SAQGFQVWGHQ Trigger: CTGGTGGCCCCAGACCTGGAAGCCCTGAGCACTCCAGATTCTTGTGAGGAGAACAATGCAGCCCCCAAGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 90 bp | GGGCAATCTTCTCGGTTGTCGAGCTGCTTCGGCCAGGATCAGGTCTaGCCAGAGCAGGTGGTTCCTGGTTTTTCTCAGGAAGGACGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQSSRLSSCFGQDQV*PEQVVPGFSQEGRP Trigger: AGGACGTCCTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCCGAAGCAGCTCGACAACCGAGAAGATTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS GCA 72 bp | CTCGGTTGTCGAGCTGCTTCGGCCAGGATCAGGTCTTaGCAGAGCAGGTGGTTCCTGGTTTTTCTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGCRAASARIRS*QSRWFLVFLRK Trigger: CTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCCGAAGCAGCTCGACAACCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CCA 72 bp | GCTGCTTCGGCCAGGATCAGGTCTTGCCAGAGCAGGTaGTTCCTGGTTTTTCTCAGGAAGGACGTCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AASARIRSCQSR*FLVFLRKDVLI Trigger: GATGAGGACGTCCTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCCGAAGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | CAGGAAGGACGTCCTCATCTACCACATCAACCCTTTTaGCAAGGAATGGCGACTGCAGCTCCTGGGTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QEGRPHLPHQPF*QGMATAAPGSD Trigger: GTCCGACCCAGGAGCTGCAGTCGCCATTCCTTGCAAAAAGGGTTGATGTGGTAGATGAGGACGTCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | TCTCGGTTGTCGAGCTGCTTCGGCCAGGATCAGGTCTaGCCAGAGCAGGTGGTTCCTGGTTTTTCTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRLSSCFGQDQV*PEQVVPGFSQE Trigger: TTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGACCTGATCCTGGCCGAAGCAGCTCGACAACCGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS GCA 72 bp | ATAGCCAGACGACTGAAGAGGATGACCAGAATTAGCTaGTCCCAGCTGCCCAGAAGCACTTCTTGGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IARRLKRMTRIS*SQLPRSTSWSS Trigger: GGAGCTCCAAGAAGTGCTTCTGGGCAGCTGGGAGCAGCTAATTCTGGTCATCCTCTTCAGTCGTCTGGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS TCA 72 bp | AGAGGTGTCAGAGATGGTAACAGTGACCATGCAGCTTaGAGGGCTCATCAGCATGTTAGTACAGTCCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGVRDGNSDHAA*RAHQHVSTVLG Trigger: GCCGAGGACTGTACTAACATGCTGATGAGCCCTTCAAGCTGCATGGTCACTGTTACCATCTCTGACACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | GTGCCAGGTATTTCCTTGATGATCTTGGGGGCTGCATaGTTCTCCTCACAAGAATCTGGAGTGCTCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPGISLMILGAA*FSSQESGVLRA Trigger: AGCCCTGAGCACTCCAGATTCTTGTGAGGAGAACAATGCAGCCCCCAAGATCATCAAGGAAATACCTGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | GGATCTCATGGCTACAGTAAGTACAGACCCCTTCGGTaGGTCTCTCAGAAGGAGTACCTTCATGTGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSHGYSKYRPLR*VSQKEYLHVGL Trigger: AAGCCCCACATGAAGGTACTCCTTCTGAGAGACCAACCGAAGGGGTCTGTACTTACTGTAGCCATGAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 90 bp | CTTCGGTTGGTCTCTCAGAAGGAGTACCTTCATGTGGGGCTTTCTTaGCCAGATCCAATGAGTCTTCAATGCTGCTGGGACTGTCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRLVSQKEYLHVGLS*PDPMSLQCCWDCHS Trigger: ACTGTGACAGTCCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAGAAAGCCCCACATGAAGGTACTCCTTCTGAGAGACCAACCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS TCA 72 bp | CCTCCTCTTCCTCAGTCCCTGATATGGAGCTGCGCCTaGTGTTGTACGGTGCTAGTTTCTTATAATCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPLPQSLIWSCA*CCTVLVSYNLP Trigger: CGGAAGATTATAAGAAACTAGCACCGTACAACATCAGGCGCAGCTCCATATCAGGGACTGAGGAAGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CCA 72 bp | CTTTCTTTGCCAGATCCAATGAGTCTTCAATGCTGCTaGGACTGTCACAGTGTGAAGACACTGGCTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLPDPMSLQCC*DCHSVKTLASQ Trigger: CTGGGAAGCCAGTGTCTTCACACTGTGACAGTCCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | GTCTCTCAGAAGGAGTACCTTCATGTGGGGCTTTCTTaGCCAGATCCAATGAGTCTTCAATGCTGCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VSQKEYLHVGLS*PDPMSLQCCWD Trigger: GTCCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAGAAAGCCCCACATGAAGGTACTCCTTCTGAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 90 bp | GACAATCTTGGATCTCATGGCTACAGTAAGTACAGACCCCTTCGGTaGGTCTCTCAGAAGGAGTACCTTCATGTGGGGCTTTCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DNLGSHGYSKYRPLR*VSQKEYLHVGLSLP Trigger: TGGCAAAGAAAGCCCCACATGAAGGTACTCCTTCTGAGAGACCAACCGAAGGGGTCTGTACTTACTGTAGCCATGAGATCCAAGATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 90 bp | ATGGCAGCAGATGCCAAGATGTTCAAGGGTAATCTTCGGACAATCTaGGATCTCATGGCTACAGTAAGTACAGACCCCTTCGGTTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MAADAKMFKGNLRTI*DLMATVSTDPFGWS Trigger: AGACCAACCGAAGGGGTCTGTACTTACTGTAGCCATGAGATCCAAGATTGTCCGAAGATTACCCTTGAACATCTTGGCATCTGCTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 90 bp | GACACTTCACTGGTATTCATGTACTCCTTCACGAAGAGAATCCCTTaGATAGTTGAGCTGGAGTCCACCTTGCTTGAGACACCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: DTSLVFMYSFTKRIP*IVELESTLLETPGT Trigger: TGTTCCTGGTGTCTCAAGCAAGGTGGACTCCAGCTCAACTATCAAAGGGATTCTCTTCGTGAAGGAGTACATGAATACCAGTGAAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS TCA 72 bp | GAGTCCACCTTGCTTGAGACACCAGGAACACACAATTaGGATTGTTCAGAGGTGTCAGAGATGGTAACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ESTLLETPGTHN*DCSEVSEMVTV Trigger: CACTGTTACCATCTCTGACACCTCTGAACAATCTCAATTGTGTGTTCCTGGTGTCTCAAGCAAGGTGGACTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS TCA 72 bp | CATAGCATTTCCCACAGTGGATGGTGTCACGGTGAATaGAGATCTGATCTAGGAGATCACCCATCGGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HSISHSGWCHGE*RSDLGDHPSVY Trigger: ATAAACCGATGGGTGATCTCCTAGATCAGATCTTCATTCACCGTGACACCATCCACTGTGGGAAATGCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CCA 72 bp | AGTGTGAAGACACTGGCTTCCCAGAAGACACTTCACTaGTATTCATGTACTCCTTCACGAAGAGAATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVKTLASQKTLH*YSCTPSRRESL Trigger: AAGGGATTCTCTTCGTGAAGGAGTACATGAATACCAGTGAAGTGTCTTCTGGGAAGCCAGTGTCTTCACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | CTGGTATTCATGTACTCCTTCACGAAGAGAATCCCTTaGATAGTTGAGCTGGAGTCCACCTTGCTTGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: LVFMYSFTKRIP*IVELESTLLET Trigger: TGTCTCAAGCAAGGTGGACTCCAGCTCAACTATCAAAGGGATTCTCTTCGTGAAGGAGTACATGAATACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | GATGCCAAGATGTTCAAGGGTAATCTTCGGACAATCTaGGATCTCATGGCTACAGTAAGTACAGACCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DAKMFKGNLRTI*DLMATVSTDPF Trigger: GAAGGGGTCTGTACTTACTGTAGCCATGAGATCCAAGATTGTCCGAAGATTACCCTTGAACATCTTGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114546.9 ENSMUST00000164800.8 |
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| CDS CAA 72 bp | AGTGTAGTCCGTACTTTCATCTGTCTTAGGATATTATaGCGCTCCTCTTCACCAGATGGTACAGTTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVVRTFICLRIL*RSSSPDGTVLP Trigger: AGGGAGAACTGTACCATCTGGTGAAGAGGAGCGCAATAATATCCTAAGACAGATGAAAGTACGGACTACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114546.9 ENSMUST00000134588.3 ENSMUST00000164800.8 |
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| CDS CAA 90 bp | TCACCCTTTAGTGTAGTCCGTACTTTCATCTGTCTTAGGATATTATaGCGCTCCTCTTCACCAGATGGTACAGTTCTCCCTTTCCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: SPFSVVRTFICLRIL*RSSSPDGTVLPFPI Trigger: TATTGGGAAAGGGAGAACTGTACCATCTGGTGAAGAGGAGCGCAATAATATCCTAAGACAGATGAAAGTACGGACTACACTAAAGGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114546.9 ENSMUST00000134588.3 ENSMUST00000164800.8 |
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