Pregenerated sensors for ZFP184 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006720Ensembl transcript IDs: ENSMUST00000006903.8, ENSMUST00000102978.8, ENSMUST00000152258.9, ENSMUST00000176511.8, ENSMUST00000176580.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGTTCCTACAGCAGCCACAGCAGGGTGCAATCTCTGGTGTTTGGTaGGAGCAGAGTGACACTGGAAGGCTTTTTCACAGTCCTCACACC | + |
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Preference number: 1 (lower is better) Translates to: MFLQQPQQGAISGVW*EQSDTGRLFHSPHT Trigger: GGTGTGAGGACTGTGAAAAAGCCTTCCAGTGTCACTCTGCTCTCACCAAACACCAGAGATTGCACCCTGCTGTGGCTGCTGTAGGAACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR GCA 90 bp | TATTTCCAGCTCTTTTCTTCCAGTCTTCCAAGGGACCGACAGGAATaGACGAATCCTCAGTCCATGGCTCTGTCCCTTGCTCTAGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: YFQLFSSSLPRDRQE*TNPQSMALSLALVG Trigger: CCCAACTAGAGCAAGGGACAGAGCCATGGACTGAGGATTCGTGCATTCCTGTCGGTCCCTTGGAAGACTGGAAGAAAAGAGCTGGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR TCA 90 bp | TTCTCCGTTATTTGGACTTCCCTTGGCAGCATCTGTTGGTTTGCTTaGAGCTTCTCTAAACTCCCATCATCCCTTTTGCTGTTGGTTACT | + |
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Preference number: 1 (lower is better) Translates to: FSVIWTSLGSICWFA*SFSKLPSSLLLLVT Trigger: AGTAACCAACAGCAAAAGGGATGATGGGAGTTTAGAGAAGCTTCAAGCAAACCAACAGATGCTGCCAAGGGAAGTCCAAATAACGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR GCA 90 bp | CCATCATCCCTTTTGCTGTTGGTTACTACTGTCTCTGAGAATAGATaGTCTTCAGAAATGTCAAGTTCTAGGGATGACACACTATTTCCA | + |
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Preference number: 1 (lower is better) Translates to: PSSLLLLVTTVSENR*SSEMSSSRDDTLFP Trigger: TGGAAATAGTGTGTCATCCCTAGAACTTGACATTTCTGAAGAGCATCTATTCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR GCA 90 bp | TCTGTTGGTTTGCTTGAAGCTTCTCTAAACTCCCATCATCCCTTTTaGTGTTGGTTACTACTGTCTCTGAGAATAGATGCTCTTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SVGLLEASLNSHHPF*CWLLLSLRIDALQK Trigger: TTTCTGAAGAGCATCTATTCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATGATGGGAGTTTAGAGAAGCTTCAAGCAAACCAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR CCA 90 bp | GGTTTGCTTGAAGCTTCTCTAAACTCCCATCATCCCTTTTGCTGTTaGTTACTACTGTCTCTGAGAATAGATGCTCTTCAGAAATGTCAA | + |
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Preference number: 1 (lower is better) Translates to: GLLEASLNSHHPFCC*LLLSLRIDALQKCQ Trigger: TTGACATTTCTGAAGAGCATCTATTCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATGATGGGAGTTTAGAGAAGCTTCAAGCAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR GCA 90 bp | GAATCTTTCATTTCACCTCATTTACAGAAGAAACTTAAAGCAGCTTaGCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ESFISPHLQKKLKAA*HNVVLITYLDQNSP Trigger: TGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGCTTTAAGTTTCTTCTGTAAATGAGGTGAAATGAAAGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176580.8 |
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| 3UTR CAA 90 bp | CACACTGAGGTTGCTCTCACAAGTGGGTGCTGTTTTCTCCGTTATTaGGACTTCCCTTGGCAGCATCTGTTGGTTTGCTTGAAGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: HTEVALTSGCCFLRY*DFPWQHLLVCLKLL Trigger: GAGAAGCTTCAAGCAAACCAACAGATGCTGCCAAGGGAAGTCCAAATAACGGAGAAAACAGCACCCACTTGTGAGAGCAACCTCAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAGTTAGCAGAGCAACTATGTTAATGATGTTCCTACAGCAGCCACAGCAGGTATGCGTTCTTTGGTaGCGAATGAGAGCAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: TKVSRATMLMMFLQQPQQVCVLW*RMRAEQ Trigger: CTGTTCTGCTCTCATTCGCCACCAAAGAACGCATAC...CTGCTGTGGCTGCTGTAGGAACATCATTAACATAGTTGCTCTGCTAACTTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGTTAGCAGAGCAACTATGTTAATGATGTTCCTACAGCAGCCACAGCAGCATGGCTCTGTCCCTTaGTCTAGTTGGGAAATCATA | + |
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Preference number: 2 (lower is better) Translates to: TKVSRATMLMMFLQQPQQHGSVP*SSWEII Trigger: TATGATTTCCCAACTAGAGCAAGGGACAGAGCCATG...CTGCTGTGGCTGCTGTAGGAACATCATTAACATAGTTGCTCTGCTAACTTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTACACAGCTTCTCCTTTTTAACTGGGTGGGAATTCTGCTTGGCTCTTGTTCATCCCTTTTGCTGTTaGTTACTACTGTCTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLHSFSFLTGWEFCLALVHPFCC*LLLSLR Trigger: TCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATG...AACAAGAGCCAAGCAGAATTCCCACCCAGTTAAAAAGGAGAAGCTGTGTAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR CAA 90 bp | AAGAAACTTAAAGCAGCTTGCCACAATGTTGTTTTAATAACATACTaGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: KKLKAACHNVVLITY*DQNSPMGSPSHHVT Trigger: TGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGCTTTAAGTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176580.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCTTCCTCCTCCCACTCTaGTTCATTTCTATAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: PQCCFNNILGSEQPNGLSFLLPL*FISIKP Trigger: TGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAA...GGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCTTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATACTGGGTGGGAATTCTaGTTGGCTCTTGTTTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: SSLPQCCFNNILGSEQPNTGWEF*LALVLV Trigger: CACTAAAACAAGAGCCAAGCAGAATTCCCACCCAGT...ATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR GCA 72 bp | CTCTTTTCTTCCAGTCTTCCAAGGGACCGACAGGAATaGACGAATCCTCAGTCCATGGCTCTGTCCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LFSSSLPRDRQE*TNPQSMALSLA Trigger: AGCAAGGGACAGAGCCATGGACTGAGGATTCGTGCATTCCTGTCGGTCCCTTGGAAGACTGGAAGAAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR TCA 72 bp | ATTTGGACTTCCCTTGGCAGCATCTGTTGGTTTGCTTaGAGCTTCTCTAAACTCCCATCATCCCTTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: IWTSLGSICWFA*SFSKLPSSLLL Trigger: CAGCAAAAGGGATGATGGGAGTTTAGAGAAGCTTCAAGCAAACCAACAGATGCTGCCAAGGGAAGTCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR CCA 72 bp | GAAGCTTCTCTAAACTCCCATCATCCCTTTTGCTGTTaGTTACTACTGTCTCTGAGAATAGATGCTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: EASLNSHHPFCC*LLLSLRIDALQ Trigger: CTGAAGAGCATCTATTCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATGATGGGAGTTTAGAGAAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAAAGTTAGCAGAGCAACTATGTTAATGATGTTCCTACAGCAGCCACAGCAGGTTTTAATAACATACTaGGATCAGAACAGCCCAATG | + |
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Preference number: 3 (lower is better) Translates to: TKVSRATMLMMFLQQPQQVLITY*DQNSPM Trigger: CATTGGGCTGTTCTGATCCAAGTATGTTATTAAAAC...CTGCTGTGGCTGCTGTAGGAACATCATTAACATAGTTGCTCTGCTAACTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| 3UTR TCA 72 bp | AGAAAAATTTACTTTAAGGAGTTCCTCCTCCCACTCTaGTTCATTTCTATAAAACCAAAGTTAGCAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: RKIYFKEFLLPL*FISIKPKLAEQ Trigger: TTGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCCTTAAAGTAAATTTTTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| 3UTR TCA 72 bp | TGCATTAGAACAGGAGCAAAACAAATTCCTAGTTACTaGAGCCAAATTTCTTCTACTAGCAAAACATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: CIRTGAKQIPSY*SQISSTSKTCK Trigger: TTTGCATGTTTTGCTAGTAGAAGAAATTTGGCTTCAGTAACTAGGAATTTGTTTTGCTCCTGTTCTAATGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
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| CDS-3UTR TCA 90 bp | ACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGAGGGTATGTGCTCTGGCTaGAAGTCTGTGGGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: TYLDQNSPMGSPSHHVTEGMCSG*KSVGTQ Trigger: CTGAGTGCCCACAGACTTTCAGCCAGAGCACATACC...CTCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CCA 90 bp | AACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGAAGGTCTTCCCGCACTTaGGGCAGGCATACGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NILGSEQPNGLSIPPCDRRSSRT*GRHTAL Trigger: CAAAGCCGTATGCCTGCCCCAAGTGCGGGAAGACCT...TCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR TCA 90 bp | ACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGAGTCCATTCTTCCTGAGTaGAGTTCACGACCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: TYLDQNSPMGSPSHHVTESILPE*SSRPHP Trigger: AGGATGTGGTCGTGAACTTCACTCAGGAAGAATGGA...CTCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| CDS-3UTR TCA 90 bp | AATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACGTGACGGATAAACGTTaGTGGGCCGTTGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: NNILGSEQPNGLSIPPCDVTDKR*WAVEGL Trigger: AAGGCCTTCAACGGCCCATCAACGTTTATCCGTCAC...GTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR GCA 90 bp | AATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACGAGACTGGCAGAGTCTaGAAAGGACAGACCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: NNILGSEQPNGLSIPPCDETGRV*KGQTCH Trigger: ATGGCAGGTCTGTCCTTTGCAGACTCTGCCAGTCTC...GTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| CDS-3UTR TCA 90 bp | AATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACTCACGACCACATCCTTaGAGGTCACTGATTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: NNILGSEQPNGLSIPPCDSRPHP*RSLIPE Trigger: TTCGGGAATCAGTGACCTTCAAGGATGTGGTCGTGA...GTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| CDS-3UTR TCA 90 bp | AACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGAGGTTTGACAGATAGCTaGAAGCCTTTCCACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: NILGSEQPNGLSIPPCDRGLTDS*KPFHTH Trigger: GTGAGTGTGGAAAGGCTTTCAGCTATCTGTCAAACC...TCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR GCA 90 bp | ACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGAGACTGGGTGGGAATTCTaGTTGGCTCTTGTTTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: TYLDQNSPMGSPSHHVTETGWEF*LALVLV Trigger: CACTAAAACAAGAGCCAAGCAGAATTCCCACCCAGT...CTCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CCA 90 bp | ACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGAGCTTCTCCTTTTTAACTaGGTGGGAATTCTGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TYLDQNSPMGSPSHHVTELLLFN*VGILLG Trigger: GCCAAGCAGAATTCCCACCCAGTTAAAAAGGAGAAG...CTCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CCA 90 bp | GGAGTTCCTCCTCCCACTCTGATTCATTTCTATAAAACCAAAGTTAGCAGAGCAAGGTCTTCCCGCACTTaGGGCAGGCATACGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GVPPPTLIHFYKTKVSRARSSRT*GRHTAL Trigger: CAAAGCCGTATGCCTGCCCCAAGTGCGGGAAGACCT...TGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| 3UTR CAA 72 bp | GTTGCTCTCACAAGTGGGTGCTGTTTTCTCCGTTATTaGGACTTCCCTTGGCAGCATCTGTTGGTTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VALTSGCCFLRY*DFPWQHLLVCL Trigger: CAAGCAAACCAACAGATGCTGCCAAGGGAAGTCCAAATAACGGAGAAAACAGCACCCACTTGTGAGAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| CDS-3UTR TCA 90 bp | GGGCTCTCCATCCCACCATGTGACAGAGAAAAATTTACTTTAAGGAGTTCCTCCGAGATGGACCCTCAATaGAACCCTTTCCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: GLSIPPCDREKFTLRSSSEMDPQ*NPFHTG Trigger: ACCAGTGTGGAAAGGGTTTCATTGAGGGTCCATCTC...GGAGGAACTCCTTAAAGTAAATTTTTCTCTGTCACATGGTGGGATGGAGAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR TCA 90 bp | TGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCAGGTGTGTGCTCCTGGTaGAGGTTTTCTCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: CFNNILGSEQPNGLSIPPGVCSW*RFSHTP Trigger: AGGAGTGTGAGAAAACCTTCACCAGGAGCACACACC...TGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR TCA 90 bp | CCACCATGTGACAGAGAAAAATTTACTTTAAGGAGTTCCTCCTCCCACTCTGATGGTATGTGCTCTGGCTaGAAGTCTGTGGGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: PPCDREKFTLRSSSSHSDGMCSG*KSVGTQ Trigger: CTGAGTGCCCACAGACTTTCAGCCAGAGCACATACC...ATCAGAGTGGGAGGAGGAACTCCTTAAAGTAAATTTTTCTCTGTCACATGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR TCA 90 bp | GGAGTTCCTCCTCCCACTCTGATTCATTTCTATAAAACCAAAGTTAGCAGAGCAGTGACGGATAAACGTTaGTGGGCCGTTGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GVPPPTLIHFYKTKVSRAVTDKR*WAVEGL Trigger: AAGGCCTTCAACGGCCCATCAACGTTTATCCGTCAC...TGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR GCA 90 bp | GGAGTTCCTCCTCCCACTCTGATTCATTTCTATAAAACCAAAGTTAGCAGAGCAGAGACTGGCAGAGTCTaGAAAGGACAGACCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GVPPPTLIHFYKTKVSRAETGRV*KGQTCH Trigger: ATGGCAGGTCTGTCCTTTGCAGACTCTGCCAGTCTC...TGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| CDS-3UTR CCA 90 bp | GGAGTTCCTCCTCCCACTCTGATTCATTTCTATAAAACCAAAGTTAGCAGAGCAGTGAGGTATGTGCTCTaGCTGAAAGTCTGTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GVPPPTLIHFYKTKVSRAVRYVL*LKVCGH Trigger: GTGCCCACAGACTTTCAGCCAGAGCACATACCTCAC...TGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR TCA 90 bp | GGGCTCTCCATCCCACCATGTGACAGAGAAAAATTTACTTTAAGGAGTTCCTCCATCCTTGAAGGTCACTaGTTCCCGAAAACTAGATGG | + |
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Preference number: 4 (lower is better) Translates to: GLSIPPCDREKFTLRSSSILEGH*FPKTRW Trigger: CCATCTAGTTTTCGGGAATCAGTGACCTTCAAGGAT...GGAGGAACTCCTTAAAGTAAATTTTTCTCTGTCACATGGTGGGATGGAGAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| CDS-3UTR TCA 90 bp | CACTTACACAGCTTCTCCTTTTTAACTGGGTGGGAATTCTGCTTGGCTCTTGTTTCCATTCTTCCTGAGTaGAGTTCACGACCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: HLHSFSFLTGWEFCLALVSILPE*SSRPHP Trigger: AGGATGTGGTCGTGAACTTCACTCAGGAAGAATGGA...AACAAGAGCCAAGCAGAATTCCCACCCAGTTAAAAAGGAGAAGCTGTGTAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
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| CDS-3UTR TCA 90 bp | CACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCAGGTGTGTGCTCCTGGTaGAGGTTTTCTCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: HNVVLITYLDQNSPMGSPGVCSW*RFSHTP Trigger: AGGAGTGTGAGAAAACCTTCACCAGGAGCACACACC...TGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR TCA 90 bp | AATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACGGCTTTGCTCCTGTATaGATTCTCTTGTGTTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: NNILGSEQPNGLSIPPCDGFAPV*ILLCCV Trigger: TACACAACACAAGAGAATTCATACAGGAGCAAAGCC...GTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR GCA 90 bp | TTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCGAGACTGGCAGAGTCTaGAAAGGACAGACCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LPQCCFNNILGSEQPNGLETGRV*KGQTCH Trigger: ATGGCAGGTCTGTCCTTTGCAGACTCTGCCAGTCTC...GAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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| CDS-3UTR CCA 90 bp | GGGCTCTCCATCCCACCATGTGACAGAGAAAAATTTACTTTAAGGAGTTCCTCCGTTTTCTCCGTTATTTaGACTTCCCTTGGCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: GLSIPPCDREKFTLRSSSVFSVI*TSLGSI Trigger: GATGCTGCCAAGGGAAGTCCAAATAACGGAGAAAAC...GGAGGAACTCCTTAAAGTAAATTTTTCTCTGTCACATGGTGGGATGGAGAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CCA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTGCAGGGTGCAATCTCTaGTGTTTGGTGAGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: CHNVVLITYLDQNSPMGSAGCNL*CLVRAE Trigger: CTCTGCTCTCACCAAACACCAGAGATTGCACCCTGC...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CCA 90 bp | CACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCAGCAGGGTGCAATCTCTaGTGTTTGGTGAGAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HNVVLITYLDQNSPMGSPAGCNL*CLVRAE Trigger: CTCTGCTCTCACCAAACACCAGAGATTGCACCCTGC...TGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCACGACCACATCCTTaGAGGTCACTGATTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPQCCFNNILGSEQPNGLSRPHP*RSLIPE Trigger: TTCGGGAATCAGTGACCTTCAAGGATGTGGTCGTGA...GAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTTCCTCCTCCCACTCTGATTCATTTCTATAAAACCAAAGTTAGCAGAGCATCCATTCTTCCTGAGTaGAGTTCACGACCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVPPPTLIHFYKTKVSRASILPE*SSRPHP Trigger: AGGATGTGGTCGTGAACTTCACTCAGGAAGAATGGA...TGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
||
| CDS-3UTR TCA 90 bp | CCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCGGTTTGACAGATAGCTaGAAGCCTTTCCACACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQCCFNNILGSEQPNGLSGLTDS*KPFHTH Trigger: GTGAGTGTGGAAAGGCTTTCAGCTATCTGTCAAACC...GGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | AATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACATGCTGAATAAGAGATaGGCCATAGCTGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NNILGSEQPNGLSIPPCDMLNKR*AIAEGF Trigger: AAAACCTTCAGCTATGGCTCATCTCTTATTCAGCAT...GTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCATTGGTGAGAGCAGAGTaGCACTGGAAGGCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CCFNNILGSEQPNGLSIPLVRAE*HWKAFS Trigger: TGAAAAAGCCTTCCAGTGTCACTCTGCTCTCACCAA...TGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | CCACCATGTGACAGAGAAAAATTTACTTTAAGGAGTTCCTCCTCCCACTCTGATGTATGCGTTCTTTGGTaGCGAATGAGAGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PPCDREKFTLRSSSSHSDVCVLW*RMRAEQ Trigger: CTGTTCTGCTCTCATTCGCCACCAAAGAACGCATAC...ATCAGAGTGGGAGGAGGAACTCCTTAAAGTAAATTTTTCTCTGTCACATGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | CACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCACTGGCTGAAAGTCTGTaGGCACTCAGAGTTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNVVLITYLDQNSPMGSPLAESL*ALRVVR Trigger: CCTTACAACTCTGAGTGCCCACAGACTTTCAGCCAG...TGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGTGAGGTATGTGCTCTaGCTGAAAGTCTGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLPQCCFNNILGSEQPNVRYVL*LKVCGH Trigger: GTGCCCACAGACTTTCAGCCAGAGCACATACCTCAC...ATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAGAAAAATTTACTTTAAGGAGTTCCTCCTCCCACTCTGATTCATTTCTATCAGGTTTGGAAACCTaGAGCCCTGCTCAGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DREKFTLRSSSSHSDSFLSGLET*SPAQRE Trigger: CTCCCTCTGAGCAGGGCTCCAGGTTTCCAAACCTGA...TAGAAATGAATCAGAGTGGGAGGAGGAACTCCTTAAAGTAAATTTTTCTCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176580.8 |
||
| 3UTR CAA 72 bp | AAAGCAGCTTGCCACAATGTTGTTTTAATAACATACTaGGATCAGAACAGCCCAATGGGCTCTCCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAACHNVVLITY*DQNSPMGSPSH Trigger: GTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176580.8 |
||
| CDS-3UTR GCA 90 bp | CCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCCATGGCTCTGTCCCTTaGTCTAGTTGGGAAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: PQCCFNNILGSEQPNGLSHGSVP*SSWEII Trigger: TATGATTTCCCAACTAGAGCAAGGGACAGAGCCATG...GGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTTCCTCCTCCCACTCTGATTCATTTCTATAAAACCAAAGTTAGCAGAGCAACTGGGTGGGAATTCTaGTTGGCTCTTGTTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVPPPTLIHFYKTKVSRATGWEF*LALVLV Trigger: CACTAAAACAAGAGCCAAGCAGAATTCCCACCCAGT...TGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCGTATGCGTTCTTTGGTaGCGAATGAGAGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPQCCFNNILGSEQPNGLVCVLW*RMRAEQ Trigger: CTGTTCTGCTCTCATTCGCCACCAAAGAACGCATAC...GAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | CACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCAATCCTTGAAGGTCACTaGTTCCCGAAAACTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HNVVLITYLDQNSPMGSPILEGH*FPKTRW Trigger: CCATCTAGTTTTCGGGAATCAGTGACCTTCAAGGAT...TGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 ENSMUST00000176580.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCACCCGTATGGATTCTCTaGTGGTTTATAAGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CFNNILGSEQPNGLSIPPPVWIL*WFIRFS Trigger: TGAAAACCTTATAAACCATCAGAGAATCCATACGGG...TGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAGAAAAATTTACTTTAAGGAGTTCCTCCTCCCACTCTGATTCATTTCTAGAGATGGACCCTCAATaGAACCCTTTCCACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DREKFTLRSSSSHSDSFLEMDPQ*NPFHTG Trigger: ACCAGTGTGGAAAGGGTTTCATTGAGGGTCCATCTC...TAGAAATGAATCAGAGTGGGAGGAGGAACTCCTTAAAGTAAATTTTTCTCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCAATGCTGATTAAGGTTTaGCAGATAGCTGAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFNNILGSEQPNGLSIPPMLIKV*QIAESL Trigger: AAGGCTTTCAGCTATCTGTCAAACCTTAATCAGCAT...TGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCAGGCTTTGCTCCTGTATaGATTCTCTTGTGTTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CCFNNILGSEQPNGLSIPGFAPV*ILLCCV Trigger: TACACAACACAAGAGAATTCATACAGGAGCAAAGCC...TGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR GCA 90 bp | CACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCACATGGCTCTGTCCCTTaGTCTAGTTGGGAAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: HNVVLITYLDQNSPMGSPHGSVP*SSWEII Trigger: TATGATTTCCCAACTAGAGCAAGGGACAGAGCCATG...TGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTTCCTCCTCCCACTCTGATTCATTTCTATAAAACCAAAGTTAGCAGAGCACATCCCTTTTGCTGTTaGTTACTACTGTCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVPPPTLIHFYKTKVSRAHPFCC*LLLSLR Trigger: TCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATG...TGCTCTGCTAACTTTGGTTTTATAGAAATGAATCAGAGTGGGAGGAGGAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTTATTTGGACTTCCCTTaGCAGCATCTGTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHNVVLITYLDQNSPMGSYLDFP*QHLLVC Trigger: GCAAACCAACAGATGCTGCCAAGGGAAGTCCAAATA...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCATTAGAACAGGAGCAAAACAAATTCCTAGTTACTGAAGCCAAATTTCTTTCACGACCACATCCTTaGAGGTCACTGATTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SALEQEQNKFLVTEAKFLSRPHP*RSLIPE Trigger: TTCGGGAATCAGTGACCTTCAAGGATGTGGTCGTGA...AAGAAATTTGGCTTCAGTAACTAGGAATTTGTTTTGCTCCTGTTCTAATGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCAGGTTTTCACTTCTGCTaGAAGCTTTGTTACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFNNILGSEQPNGLSIPPGFHFC*KLCYIH Trigger: ATGAATGTAACAAAGCTTTCAGCAGAAGTGAAAACC...TGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCAATGCTTAGCAAGAGATaGACTCCGAATAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CCFNNILGSEQPNGLSIPMLSKR*TPNKGF Trigger: AAAGCCTTTATTCGGAGTTCATCTCTTGCTAAGCAT...TGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTATGTTGAGCAAGAGATaGACAGTGTCGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHNVVLITYLDQNSPMGSMLSKR*TVSKGL Trigger: AAGACCTTTCGACACTGTTCATCTCTTGCTCAACAT...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAGAAAAATTTACTTTAAGGAGTTCCTCCTCCCACTCTGATTCATTTCTATTGGTGAGAGCAGAGTaGCACTGGAAGGCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DREKFTLRSSSSHSDSFLLVRAE*HWKAFS Trigger: TGAAAAAGCCTTCCAGTGTCACTCTGCTCTCACCAA...TAGAAATGAATCAGAGTGGGAGGAGGAACTCCTTAAAGTAAATTTTTCTCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | CACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCACATCCCTTTTGCTGTTaGTTACTACTGTCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNVVLITYLDQNSPMGSPHPFCC*LLLSLR Trigger: TCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATG...TGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCATTAGAACAGGAGCAAAACAAATTCCTAGTTACTGAAGCCAAATTTCTTCTGGCTGAAAGTCTGTaGGCACTCAGAGTTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SALEQEQNKFLVTEAKFLLAESL*ALRVVR Trigger: CCTTACAACTCTGAGTGCCCACAGACTTTCAGCCAG...AAGAAATTTGGCTTCAGTAACTAGGAATTTGTTTTGCTCCTGTTCTAATGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
||
| CDS-3UTR TCA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTATGCTGATTAAGGTTTaGCAGATAGCTGAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHNVVLITYLDQNSPMGSMLIKV*QIAESL Trigger: AAGGCTTTCAGCTATCTGTCAAACCTTAATCAGCAT...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTATGCTTAGCAAGAGATaGACTCCGAATAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CHNVVLITYLDQNSPMGSMLSKR*TPNKGF Trigger: AAAGCCTTTATTCGGAGTTCATCTCTTGCTAAGCAT...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAGAAAAATTTACTTTAAGGAGTTCCTCCTCCCACTCTGATTCATTTCTAATGTTGAGCAAGAGATaGACAGTGTCGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DREKFTLRSSSSHSDSFLMLSKR*TVSKGL Trigger: AAGACCTTTCGACACTGTTCATCTCTTGCTCAACAT...TAGAAATGAATCAGAGTGGGAGGAGGAACTCCTTAAAGTAAATTTTTCTCTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CCA 90 bp | TTCATTTCACCTCATTTACAGAAGAAACTTAAAGCAGCTTGCCACAATGTTGTTTATTTGGACTTCCCTTaGCAGCATCTGTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FISPHLQKKLKAACHNVVYLDFP*QHLLVC Trigger: GCAAACCAACAGATGCTGCCAAGGGAAGTCCAAATA...AACAACATTGTGGCAAGCTGCTTTAAGTTTCTTCTGTAAATGAGGTGAAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCATTAGAACAGGAGCAAAACAAATTCCTAGTTACTGAAGCCAAATTTCTTCTTCTCCTTTTTAACTaGGTGGGAATTCTGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SALEQEQNKFLVTEAKFLLLLFN*VGILLG Trigger: GCCAAGCAGAATTCCCACCCAGTTAAAAAGGAGAAG...AAGAAATTTGGCTTCAGTAACTAGGAATTTGTTTTGCTCCTGTTCTAATGCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGTTTTCACTTCTGCTaGAAGCTTTGTTACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLPQCCFNNILGSEQPNGFHFC*KLCYIH Trigger: ATGAATGTAACAAAGCTTTCAGCAGAAGTGAAAACC...ATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCATTAGAACAGGAGCAAAACAAATTCCTAGTTACTGAAGCCAAATTTCTTCCCGTATGGATTCTCTaGTGGTTTATAAGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SALEQEQNKFLVTEAKFLPVWIL*WFIRFS Trigger: TGAAAACCTTATAAACCATCAGAGAATCCATACGGG...AAGAAATTTGGCTTCAGTAACTAGGAATTTGTTTTGCTCCTGTTCTAATGCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
||
| CDS-3UTR CAA 90 bp | AACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGATCCAGTATGCGTTCTTaGGTGGCGAATGAGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NILGSEQPNGLSIPPCDRSSMRS*VANESR Trigger: TCTGCTCTCATTCGCCACCAAAGAACGCATACTGGA...TCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CAA 90 bp | AATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACGCTTTACCACATTCGTaGCACTTACACAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NNILGSEQPNGLSIPPCDALPHS*HLHSFS Trigger: GGAGAAGCTGTGTAAGTGCAACGAATGTGGTAAAGC...GTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCAAACGTTGATGGGCCGTaGAAGGCCTTCCCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CFNNILGSEQPNGLSIPPNVDGP*KAFPHS Trigger: TGAATGTGGGAAGGCCTTCAACGGCCCATCAACGTT...TGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CAA 90 bp | AATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCACCATGTGACAGGTGTATTTTCTGGTaGAAGGCTCGCCCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: NNILGSEQPNGLSIPPCDRCIFW*KARPHS Trigger: TGAATGTGGGCGAGCCTTCAACCAGAAAATACACCT...GTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTAACGTTGATGGGCCGTaGAAGGCCTTCCCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CHNVVLITYLDQNSPMGSNVDGP*KAFPHS Trigger: TGAATGTGGGAAGGCCTTCAACGGCCCATCAACGTT...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCATCCCAGCTTTACCACATTCGTaGCACTTACACAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CCFNNILGSEQPNGLSIPALPHS*HLHSFS Trigger: GGAGAAGCTGTGTAAGTGCAACGAATGTGGTAAAGC...TGGGATGGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTTCCAGTATGCGTTCTTaGGTGGCGAATGAGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CHNVVLITYLDQNSPMGSSSMRS*VANESR Trigger: TCTGCTCTCATTCGCCACCAAAGAACGCATACTGGA...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTCCAGGTGTATTTTCTGGTaGAAGGCTCGCCCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQCCFNNILGSEQPNGLSRCIFW*KARPHS Trigger: TGAATGTGGGCGAGCCTTCAACCAGAAAATACACCT...GGAGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CAA 90 bp | TTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTTATTTGGACTTCCCTaGGCAGCATCTGTTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: LPQCCFNNILGSEQPNGLLFGLP*AASVGL Trigger: CAAACCAACAGATGCTGCCAAGGGAAGTCCAAATAA...GAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CAA 90 bp | TGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGGGCTCTGAAATCATATCAGGTTaGGAAACCTGGAGCCCTATA | + |
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Preference number: 5 (lower is better) Translates to: CHNVVLITYLDQNSPMGSEIISG*ETWSPI Trigger: TATAGGGCTCCAGGTTTCCAAACCTGATATGATTTC...AGAGCCCATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102978.8 ENSMUST00000176511.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCTTGCCACAATGTTGTTTTAATAACATACTTGGATCAGAACAGCCCAATGAAATCATATCAGGTTaGGAAACCTGGAGCCCTATA | + |
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Preference number: 5 (lower is better) Translates to: SSLPQCCFNNILGSEQPNEIISG*ETWSPI Trigger: TATAGGGCTCCAGGTTTCCAAACCTGATATGATTTC...ATTGGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
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| CDS-3UTR CAA 90 bp | AGTGCATTAGAACAGGAGCAAAACAAATTCCTAGTTACTGAAGCCAAATTTCTTTTATTTGGACTTCCCTaGGCAGCATCTGTTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SALEQEQNKFLVTEAKFLLFGLP*AASVGL Trigger: CAAACCAACAGATGCTGCCAAGGGAAGTCCAAATAA...AAGAAATTTGGCTTCAGTAACTAGGAATTTGTTTTGCTCCTGTTCTAATGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
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| CDS-3UTR CAA 90 bp | TTCATTTCACCTCATTTACAGAAGAAACTTAAAGCAGCTTGCCACAATGTTGTTTGTTTTCTCCGTTATTaGGACTTCCCTTGGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: FISPHLQKKLKAACHNVVCFLRY*DFPWQH Trigger: ATGCTGCCAAGGGAAGTCCAAATAACGGAGAAAACA...AACAACATTGTGGCAAGCTGCTTTAAGTTTCTTCTGTAAATGAGGTGAAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102978.8 |
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| CDS CCA 72 bp | CGAAAACTAGATGGTAGGAGTAGGGGACGTCCCTCGTaGAGACTGGCAGAGTCTGCAAAGGACAGACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RKLDGRSRGRPS*RLAESAKDRPA Trigger: GGCAGGTCTGTCCTTTGCAGACTCTGCCAGTCTCCACGAGGGACGTCCCCTACTCCTACCATCTAGTTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000006903.8 ENSMUST00000102978.8 ENSMUST00000152258.9 ENSMUST00000176511.8 ENSMUST00000176580.8 |
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