Pregenerated sensors for ZFP182 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054737Ensembl transcript IDs: ENSMUST00000040628.6, ENSMUST00000115333.9, ENSMUST00000115334.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCATaGACCTTAGTGTGCTACCGAACCCTCTCCAGAGTCCTTAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: SPQTSYGLCHSYLWS*TLVCYRTLSRVLSY Trigger: ATAGCTAAGGACTCTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR GCA 90 bp | TTCCTCAAATCTGTCAGATTACTTTCTGTAAATGCAAGGTTTTTCTaGTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATC | + |
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Preference number: 1 (lower is better) Translates to: FLKSVRLLSVNARFF*LFLPRPHMVFVTAI Trigger: GATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAATCTGACAGATTTGAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGAGTCCTCACTGGTGCCTTATCTaGTCTCTTCATCTCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: QLSVVMNLSVLPNPLQSPHWCLI*SLHLFK Trigger: TTTGAAGAGATGAAGAGACCAGATAAGGCACCAGTG...AGGACTCTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR CAA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTaGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAAC | + |
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Preference number: 2 (lower is better) Translates to: MQGFSACFSPDLIWS*SQLSVVMNLSVLPN Trigger: GTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTTTAAATCTCCTGCACTaGTGCCTTATCTGGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: ARFFCLFLPRPHMVFVTALNLLH*CLIWSL Trigger: AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAA...AGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR GCA 90 bp | CGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCACTACGTTTTCAACTTaGATTAGGGTGAAAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: RKPLNLLHWCLIWSLHLFTTFST*IRVKKM Trigger: CATCTTTTTCACCCTAATGCAAGTTGAAAACGTAGT...GAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGTTAAATCTCCTGCACTaGTGCCTTATCTGGTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: MQGFSACFSPDLIWSLSQLNLLH*CLIWSL Trigger: AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAA...CTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR CAA 90 bp | CTCAAATCTGTCAGATTACTTTCTGTAAATGCAAGGTTTTTCTGCTaGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LKSVRLLSVNARFFC*FLPRPHMVFVTAIC Trigger: ACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAATCTGACAGATTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCTCTAGCTGTTCCTCAAATCTGTCAGATTACTTTCTGTAAATGCAAGGTTCACTGGTGCCTTATCTaGTCTCTTCATCTCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: PSLAVPQICQITFCKCKVHWCLI*SLHLFK Trigger: TTTGAAGAGATGAAGAGACCAGATAAGGCACCAGTG...AACCTTGCATTTACAGAAAGTAATCTGACAGATTTGAGGAACAGCTAGAGATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTTTCTGTAAATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGACTACGTTTTCAACTTaGATTAGGGTGAAAAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: LLSVNARFFCLFLPRPHMTTFST*IRVKKM Trigger: CATCTTTTTCACCCTAATGCAAGTTGAAAACGTAGT...CATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCAGATTACTTTCTGTAAATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGAACTACGTTTTCAACTTaGATTAGGGTGAAAAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: SVRLLSVNARFFCLFLPRTTFST*IRVKKM Trigger: CATCTTTTTCACCCTAATGCAAGTTGAAAACGTAGT...TCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAATCTGACAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR TCA 72 bp | ACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCATaGACCTTAGTGTGCTACCGAACCCTCTCCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: TSYGLCHSYLWS*TLVCYRTLSRV Trigger: GACTCTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR GCA 72 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTaGCTTATCTGGTCTCTTCATCTCTTCAAAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: ASLRKPLNLLHW*LIWSLHLFKEI Trigger: AATTTCTTTGAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR-3UTR CAA 90 bp | AAATCATTCCTGGACTTGCTGTTTGCCAAAAGTTTTTGTGGAGAATGTGCCAGGGCAAGGTTTTTCTGCTaGTTTCTCCCCAGACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KSFLDLLFAKSFCGECARARFFC*FLPRPH Trigger: ATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGC...CCTGGCACATTCTCCACAAAAACTTTTGGCAAACAGCAAGTCCAGGAATGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| 3UTR CCA 72 bp | CAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATaGTCTTTGTCACAGCTATCTGTGGTCATGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: QGFSACFSPDLI*SLSQLSVVMNL Trigger: AAGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTGCTGCGACTTCTGGCTaGAAGCTTTCCAGCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLAATSG*KLSSTQ Trigger: TTGTGTGCTGGAAAGCTTTCAGCCAGAAGTCGCAGC...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | TGCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTGTACAGGGTCCTCTGTaGAGAGTTCAGGTATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CLTSEALKSPALVPYLVSVQGPL*RVQVLP Trigger: TGGCAATACCTGAACTCTCCACAGAGGACCCTGTAC...AGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | CAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGAGTCCTAATGTCACTGGTTCCTaGGGTTTGGCCATTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QLSVVMNLSVLPNPLQSPNVTGS*GLAISC Trigger: GCAGGAAATGGCCAAACCCCAGGAACCAGTGACATT...AGGACTCTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTATCCTCAAATGTCACTaGTTCCTGGGGTTTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLILKCH*FLGFGH Trigger: ATGGCCAAACCCCAGGAACCAGTGACATTTGAGGAT...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | TGCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCCATCTTCTGGGTCTaGTTCTTCTACCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLTSEALKSPALVPYLVSSIFWV*FFYLQL Trigger: AAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGA...AGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGGGTGGGACTTTTTGCTaGAGGTTTTCTGACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSQLSVVMNLSVLPNPLQGGTFC*RFSDMQ Trigger: CTGCATGTCAGAAAACCTTCAGCAAAAAGTCCCACC...CTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCTCGTTGATGTAGCATaGGGTAGGATTTCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLLVDVA*GRISER Trigger: TCTCTCAGAAATCCTACCTCATGCTACATCAACGAG...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | GCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTGCTGCGACTTCTGGCTaGAAGCTTTCCAGCACACAA | + |
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Preference number: 4 (lower is better) Translates to: ARFFCLFLPRPHMVFVTAAATSG*KLSSTQ Trigger: TTGTGTGCTGGAAAGCTTTCAGCCAGAAGTCGCAGC...AGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | CGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCATCCTCAAATGTCACTaGTTCCTGGGGTTTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RKPLNLLHWCLIWSLHLFILKCH*FLGFGH Trigger: ATGGCCAAACCCCAGGAACCAGTGACATTTGAGGAT...GAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | TTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGATGGGATCTCTGCATTaGAACAAGAAGGCCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LSQLSVVMNLSVLPNPLQMGSLH*NKKACA Trigger: AGCACAGGCCTTCTTGTTCCAATGCAGAGATCCCAT...CTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | CAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGAGTCCTGGTCTTTCTCCTGTGTaGGTTCTGAGGTGTATAATG | + |
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Preference number: 4 (lower is better) Translates to: QLSVVMNLSVLPNPLQSPGLSPV*VLRCIM Trigger: CATTATACACCTCAGAACCCACACAGGAGAAAGACC...AGGACTCTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | CAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGAGTCCTTCTAAGGATGATAAATaGGAGATACCTCCTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QLSVVMNLSVLPNPLQSPSKDDK*EIPPWS Trigger: AGACCAAGGAGGTATCTCTCATTTATCATCCTTAGA...AGGACTCTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | AAATCATTCCTGGACTTGCTGTTTGCCAAAAGTTTTTGTGGAGAATGTGCCAGGGCTGCGACTTCTGGCTaGAAGCTTTCCAGCACACAA | + |
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Preference number: 4 (lower is better) Translates to: KSFLDLLFAKSFCGECARAATSG*KLSSTQ Trigger: TTGTGTGCTGGAAAGCTTTCAGCCAGAAGTCGCAGC...CCTGGCACATTCTCCACAAAAACTTTTGGCAAACAGCAAGTCCAGGAATGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | GTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGGTACAGGGTCCTCTGTaGAGAGTTCAGGTATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VFLLVSPQTSYGLCHSYLVQGPL*RVQVLP Trigger: TGGCAATACCTGAACTCTCCACAGAGGACCCTGTAC...CAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTTCCATCTTCTGGGTCTaGTTCTTCTACCTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLPRPHMVFVTAICGHEPSIFWV*FFYLQL Trigger: AAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGA...AGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CCA 90 bp | TCTTTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCGGTCTTTCTCCTGTGTaGGTTCTGAGGTGTATAATG | + |
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Preference number: 4 (lower is better) Translates to: SLSQLSVVMNLSVLPNPLGLSPV*VLRCIM Trigger: CATTATACACCTCAGAACCCACACAGGAGAAAGACC...GAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGGTGGGACTTTTTGCTaGAGGTTTTCTGACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: FSACFSPDLIWSLSQLSVGGTFC*RFSDMQ Trigger: CTGCATGTCAGAAAACCTTCAGCAAAAAGTCCCACC...CACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGATGGATGATGACAGTTaGCTTTTCTCTGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSQLSVVMNLSVLPNPLQMDDDS*LFSEGF Trigger: AAAGCCTTCAGAGAAAAGTCAACTGTCATCATCCAT...CTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | GTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGGGTCAAGCTTCTGTATaGAAGATTCCCCACACTTGG | + |
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Preference number: 4 (lower is better) Translates to: VFLLVSPQTSYGLCHSYLGQASV*KIPHTW Trigger: CCAAGTGTGGGGAATCTTTCATACAGAAGCTTGACC...CAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TTCCTGGACTTGCTGTTTGCCAAAAGTTTTTGTGGAGAATGTGCCAGGATCACAGGTCAAGCTTCTGTATaGAAGATTCCCCACACTTGG | + |
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Preference number: 4 (lower is better) Translates to: FLDLLFAKSFCGECARITGQASV*KIPHTW Trigger: CCAAGTGTGGGGAATCTTTCATACAGAAGCTTGACC...TGTGATCCTGGCACATTCTCCACAAAAACTTTTGGCAAACAGCAAGTCCAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTGGCTTCTTTCCTGTATaGGTACTATGGTGTATAATT | + |
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Preference number: 4 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLGFFPV*VLWCII Trigger: AATTATACACCATAGTACTCATACAGGAAAGAAGCC...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TCTTTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCGGGTTGACTTATCACTaGACGTTTTCTTACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLSQLSVVMNLSVLPNPLGLTYH*TFSYTH Trigger: GTGAGTGTAAGAAAACGTTCAGTGATAAGTCAACCC...GAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCGGGTTGACTTATCACTaGACGTTTTCTTACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: SACFSPDLIWSLSQLSVVGLTYH*TFSYTH Trigger: GTGAGTGTAAGAAAACGTTCAGTGATAAGTCAACCC...GACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTGGGTTGACTTATCACTaGACGTTTTCTTACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: WSLSQLSVVMNLSVLPNPGLTYH*TFSYTH Trigger: GTGAGTGTAAGAAAACGTTCAGTGATAAGTCAACCC...AGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTATGTATAACGAGGGTTaGCTTATCACTGAACGTTTT | + |
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Preference number: 4 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLMYNEG*LITERF Trigger: AAAACGTTCAGTGATAAGTCAACCCTCGTTATACAT...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGGTGCACAATGAGGGTTaGCTTTTCGTTGAAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: LSQLSVVMNLSVLPNPLQVHNEG*LFVERF Trigger: AAATCTTTCAACGAAAAGTCAACCCTCATTGTGCAC...CTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR TCA 90 bp | TGCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTATGCACACCCAGATTTaGTTTTTGGGTGAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLTSEALKSPALVPYLVSMHTQI*FLGESF Trigger: AAAACTTTCACCCAAAAATCAAATCTGGGTGTGCAT...AGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCTAAGACCTTTCTTTTaGCTGAGGGTTTTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLLRPFF*LRVFSY Trigger: ATATGAGAAAACCCTCAGGCAAAAGAAAGGTCTTAG...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGATCCTCAAATGTCACTaGTTCCTGGGGTTTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MQGFSACFSPDLIWSLSQILKCH*FLGFGH Trigger: ATGGCCAAACCCCAGGAACCAGTGACATTTGAGGAT...CTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTAATTTCTCCATCTTCTaGGTCTGGTTCTTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSLSQLSVVMNLSVLPNPNFSIF*VWFFYL Trigger: GAGGTAGAAGAACCAGACCCAGAAGATGGAGAAATT...AGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTTGGAAAGCTCCAAACTaGAATTTCTCCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSLSQLSVVMNLSVLPNPWKAPN*NFSIFW Trigger: CCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCA...AGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGATGGGATCTCTGCATTaGAACAAGAAGGCCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVSPQTSYGLCHSYLMGSLH*NKKACA Trigger: AGCACAGGCCTTCTTGTTCCAATGCAGAGATCCCAT...CAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCTCTAAGGATGATAAATaGGAGATACCTCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SACFSPDLIWSLSQLSVVSKDDK*EIPPWS Trigger: AGACCAAGGAGGTATCTCTCATTTATCATCCTTAGA...GACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTATGGATGATGACAGTTaGCTTTTCTCTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSLSQLSVVMNLSVLPNPMDDDS*LFSEGF Trigger: AAAGCCTTCAGAGAAAAGTCAACTGTCATCATCCAT...AGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCACAGCTATCTGTGGTCATGAACCTTAGTGTGCTACCGAACCCTCTCCAGATGTATAACGAGGGTTaGCTTATCACTGAACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLSVVMNLSVLPNPLQMYNEG*LITERF Trigger: AAAACGTTCAGTGATAAGTCAACCCTCGTTATACAT...CTGGAGAGGGTTCGGTAGCACACTAAGGTTCATGACCACAGATAGCTGTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCAATGGAAAGCTCCAAACTaGAATTTCTCCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EALKSPALVPYLVSSSLQWKAPN*NFSIFW Trigger: CCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCA...TTGAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTAATTGTTCATTAATTTaGCAGACTTCTGGAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLNCSLI*QTSGKL Trigger: GAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATT...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGGGTCTTTCTCCTGTGTaGGTTCTGAGGTGTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: MQGFSACFSPDLIWSLSQGLSPV*VLRCIM Trigger: CATTATACACCTCAGAACCCACACAGGAGAAAGACC...CTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGACCAACTATATCCCTATCTTCCCCATCTCTAGCTGTTCCTCAAATCTGCTGGTTCCTGGGGTTTaGCCATTTCCTGCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKTNYIPIFPISSCSSNLLVPGV*PFPAFL Trigger: AAGAAAAGCAGGAAATGGCCAAACCCCAGGAACCAG...CAGATTTGAGGAACAGCTAGAGATGGGGAAGATAGGGATATAGTTGGTCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115334.8 |
||
| 3UTR CAA 72 bp | TTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTaGTCACAGCTATCTGTGGTCATGAACCTTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSACFSPDLIWS*SQLSVVMNLSV Trigger: CACACTAAGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCAAGTGCACAATGAGGGTTaGCTTTTCGTTGAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: EALKSPALVPYLVSSSLQVHNEG*LFVERF Trigger: AAATCTTTCAACGAAAAGTCAACCCTCATTGTGCAC...TTGAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCATGCACACCCAGATTTaGTTTTTGGGTGAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SACFSPDLIWSLSQLSVVMHTQI*FLGESF Trigger: AAAACTTTCACCCAAAAATCAAATCTGGGTGTGCAT...GACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATGGATAATGAGCTTTaGCTTTTCTCGAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARFFCLFLPRPHMVFVTAMDNEL*LFSKGL Trigger: AAGGCCTTTCGAGAAAAGTCAAAGCTCATTATCCAT...AGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTATGGATAATGAGCTTTaGCTTTTCTCGAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPRPHMVFVTAICGHEPMDNEL*LFSKGL Trigger: AAGGCCTTTCGAGAAAAGTCAAAGCTCATTATCCAT...AGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTTCTGGCTTAGTAACCTaGTGCTCTAAGGATGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARFFCLFLPRPHMVFVTASGLVT*CSKDDK Trigger: TTTATCATCCTTAGAGCAGCAGGTTACTAAGCCAGA...AGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTCGATTTTTCCCTGAATaGTTTGCCACATTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSACFSPDLIWSLSQLSRFFPE*FATFCA Trigger: TGCACAGAATGTGGCAAAGCATTCAGGGAAAAATCG...AGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGACTTGCTGTTTGCCAAAAGTTTTTGTGGAGAATGTGCCAGGATCACACGATTTTTCCCTGAATaGTTTGCCACATTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLDLLFAKSFCGECARITRFFPE*FATFCA Trigger: TGCACAGAATGTGGCAAAGCATTCAGGGAAAAATCG...TGTGATCCTGGCACATTCTCCACAAAAACTTTTGGCAAACAGCAAGTCCAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGACTTGCTGTTTGCCAAAAGTTTTTGTGGAGAATGTGCCAGGATCACAAATTTCTCCATCTTCTaGGTCTGGTTCTTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLDLLFAKSFCGECARITNFSIF*VWFFYL Trigger: GAGGTAGAAGAACCAGACCCAGAAGATGGAGAAATT...TGTGATCCTGGCACATTCTCCACAAAAACTTTTGGCAAACAGCAAGTCCAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCAAATGGAAAGCTCCAAACTaGAATTTCTCCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLNLLHWCLIWSLHLFKWKAPN*NFSIFW Trigger: CCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCA...TTTGAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTAATTTGGCAGACTTCTaGAAAGCTCCAAACTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLPRPHMVFVTAICGHEPNLADF*KAPNWN Trigger: ATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATT...AGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCAATTGTTCATTAATTTaGCAGACTTCTGGAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKPLNLLHWCLIWSLHLFNCSLI*QTSGKL Trigger: GAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATT...GAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTTCTAAGGATGATAAATaGGAGATACCTCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFSACFSPDLIWSLSQLSSKDDK*EIPPWS Trigger: AGACCAAGGAGGTATCTCTCATTTATCATCCTTAGA...AGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TTACTTTCTGTAAATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGGTCAAGCTTCTGTATaGAAGATTCCCCACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSVNARFFCLFLPRPHMGQASV*KIPHTW Trigger: CCAAGTGTGGGGAATCTTTCATACAGAAGCTTGACC...CATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTGGCTTCTTTCCTGTATaGGTACTATGGTGTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: ARFFCLFLPRPHMVFVTAGFFPV*VLWCII Trigger: AATTATACACCATAGTACTCATACAGGAAAGAAGCC...AGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCATGAACCTATGTATAACGAGGGTTaGCTTATCACTGAACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPRPHMVFVTAICGHEPMYNEG*LITERF Trigger: AAAACGTTCAGTGATAAGTCAACCCTCGTTATACAT...AGGTTCATGACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGGTGCACAATGAGGGTTaGCTTTTCGTTGAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVSPQTSYGLCHSYLVHNEG*LFVERF Trigger: AAATCTTTCAACGAAAAGTCAACCCTCATTGTGCAC...CAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGATGGATAATGAGCTTTaGCTTTTCTCGAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVSPQTSYGLCHSYLMDNEL*LFSKGL Trigger: AAGGCCTTTCGAGAAAAGTCAAAGCTCATTATCCAT...CAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGTCTGGCTTAGTAACCTaGTGCTCTAAGGATGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSACFSPDLIWSLSQLSVSGLVT*CSKDDK Trigger: TTTATCATCCTTAGAGCAGCAGGTTACTAAGCCAGA...CACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCAACTAAGACCTTTCTTTTaGCTGAGGGTTTTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EALKSPALVPYLVSSSLQLRPFF*LRVFSY Trigger: ATATGAGAAAACCCTCAGGCAAAAGAAAGGTCTTAG...TTGAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGACCAACTATATCCCTATCTTCCCCATCTCTAGCTGTTCCTCAAATCTGCGATTTTTCCCTGAATaGTTTGCCACATTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKTNYIPIFPISSCSSNLRFFPE*FATFCA Trigger: TGCACAGAATGTGGCAAAGCATTCAGGGAAAAATCG...CAGATTTGAGGAACAGCTAGAGATGGGGAAGATAGGGATATAGTTGGTCTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGAATTTGGCAGACTTCTaGAAAGCTCCAAACTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MQGFSACFSPDLIWSLSQNLADF*KAPNWN Trigger: ATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATT...CTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | TTACTTTCTGTAAATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGATGGGATCTCTGCATTaGAACAAGAAGGCCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSVNARFFCLFLPRPHMMGSLH*NKKACA Trigger: AGCACAGGCCTTCTTGTTCCAATGCAGAGATCCCAT...CATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGGGCTTCTTTCCTGTATaGGTACTATGGTGTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVSPQTSYGLCHSYLGFFPV*VLWCII Trigger: AATTATACACCATAGTACTCATACAGGAAAGAAGCC...CAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | TTACTTTCTGTAAATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGCTCGTTGATGTAGCATaGGGTAGGATTTCTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSVNARFFCLFLPRPHMLVDVA*GRISER Trigger: TCTCTCAGAAATCCTACCTCATGCTACATCAACGAG...CATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCAAAGAGAAAACAAATGTATaGAAGCTGAGTCAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPLNLLHWCLIWSLHLFKEKTNV*KLSQPD Trigger: ATCTGGTTGACTCAGCTTTCATACATTTGTTTTCTC...TTTGAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | AAATCATTCCTGGACTTGCTGTTTGCCAAAAGTTTTTGTGGAGAATGTGCCAGGAATTTGGCAGACTTCTaGAAAGCTCCAAACTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSFLDLLFAKSFCGECARNLADF*KAPNWN Trigger: ATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATT...CCTGGCACATTCTCCACAAAAACTTTTGGCAAACAGCAAGTCCAGGAATGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGAATTGTTCATTAATTTaGCAGACTTCTGGAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVSPQTSYGLCHSYLNCSLI*QTSGKL Trigger: GAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATT...CAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| 3UTR CAA 72 bp | GTCAGATTACTTTCTGTAAATGCAAGGTTTTTCTGCTaGTTTCTCCCCAGACCTCATATGGTCTTTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VRLLSVNARFFC*FLPRPHMVFVT Trigger: TGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCATTTACAGAAAGTAATCTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
||
| CDS-3UTR TCA 90 bp | CTTCATCTCTTCAAAGAAATTACACATACACTACGTTTTCAACTTGCATTAGGGCTCGTTGATGTAGCATaGGGTAGGATTTCTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHLFKEITHTLRFQLALGLVDVA*GRISER Trigger: TCTCTCAGAAATCCTACCTCATGCTACATCAACGAG...CCCTAATGCAAGTTGAAAACGTAGTGTATGTGTAATTTCTTTGAAGAGATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR GCA 90 bp | CTTCATCTCTTCAAAGAAATTACACATACACTACGTTTTCAACTTGCATTAGGGTCTGGCTTAGTAACCTaGTGCTCTAAGGATGATAAA | + |
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Preference number: 4 (lower is better) Translates to: LHLFKEITHTLRFQLALGSGLVT*CSKDDK Trigger: TTTATCATCCTTAGAGCAGCAGGTTACTAAGCCAGA...CCCTAATGCAAGTTGAAAACGTAGTGTATGTGTAATTTCTTTGAAGAGATGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | TGCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTATGAGAGATACCTCCTaGGTCTTCAGAGCCTATGGA | + |
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Preference number: 5 (lower is better) Translates to: CLTSEALKSPALVPYLVSMRDTS*VFRAYG Trigger: TCCATAGGCTCTGAAGACCAAGGAGGTATCTCTCAT...AGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | GCCTCACTTCGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTATGAGAGATACCTCCTaGGTCTTCAGAGCCTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLRKPLNLLHWCLIWSLMRDTS*VFRAYG Trigger: TCCATAGGCTCTGAAGACCAAGGAGGTATCTCTCAT...AAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCGAAGTGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | GCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTACTGGTTCCTGGGGTTaGGCCATTTCCTGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARFFCLFLPRPHMVFVTATGSWG*AISCFS Trigger: AGAAAAGCAGGAAATGGCCAAACCCCAGGAACCAGT...AGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | CGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCTCTTCTACCTCCAGCTaGATAATGAGATCTGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RKPLNLLHWCLIWSLHLFSSTSS*IMRSGL Trigger: TAAGCCAGATCTCATTATCAAGCTGGAGGTAGAAGA...GAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGTATGGGATCTCTGCATaGGAACAAGAAGGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MQGFSACFSPDLIWSLSQYGISA*EQEGLC Trigger: GCACAGGCCTTCTTGTTCCAATGCAGAGATCCCATA...CTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | CGGAAGCCCTTAAATCTCCTGCACTGGTGCCTTATCTGGTCTCTTCATCTCTTCGCTAAGACCTTTCTTTaGCCTGAGGGTTTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: RKPLNLLHWCLIWSLHLFAKTFL*PEGFLI Trigger: TATGAGAAAACCCTCAGGCAAAAGAAAGGTCTTAGC...GAAGAGATGAAGAGACCAGATAAGGCACCAGTGCAGGAGATTTAAGGGCTTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS TCA 90 bp | ATAATGAGATCTGGCTTAGTAACCTGCTGCTCTAAGGATGATAAATaGGAGATACCTCCTTGGTCTTCAGAGCCTATGGAAGCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IMRSGLVTCCSKDDK*EIPPWSSEPMEATS Trigger: TGAGGTGGCTTCCATAGGCTCTGAAGACCAAGGAGGTATCTCTCATTTATCATCCTTAGAGCAGCAGGTTACTAAGCCAGATCTCATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 90 bp | GACTTCTGGAAAGCTCCAAACTGGAATTTCTCCATCTTCTGGGTCTaGTTCTTCTACCTCCAGCTTGATAATGAGATCTGGCTTAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: DFWKAPNWNFSIFWV*FFYLQLDNEIWLSN Trigger: GTTACTAAGCCAGATCTCATTATCAAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCAGAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGTCTTCTACCTCCAGCTaGATAATGAGATCTGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: MQGFSACFSPDLIWSLSQSSTSS*IMRSGL Trigger: TAAGCCAGATCTCATTATCAAGCTGGAGGTAGAAGA...CTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | TCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGGTCCTCTTGGTAATTATGTaGTCATTAGGGAGTCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SACFSPDLIWSLSQLSVVLLVIM*SLGSLT Trigger: AGTTAGACTCCCTAATGACAACATAATTACCAAGAG...GACCACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | CCATCTCTAGCTGTTCCTCAAATCTGTCAGATTACTTTCTGTAAATGCAAGGTTTATGGGATCTCTGCATaGGAACAAGAAGGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLAVPQICQITFCKCKVYGISA*EQEGLC Trigger: GCACAGGCCTTCTTGTTCCAATGCAGAGATCCCATA...AACCTTGCATTTACAGAAAGTAATCTGACAGATTTGAGGAACAGCTAGAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | ATGCAAGGTTTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGGCTAAGACCTTTCTTTaGCCTGAGGGTTTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: MQGFSACFSPDLIWSLSQAKTFL*PEGFLI Trigger: TATGAGAAAACCCTCAGGCAAAAGAAAGGTCTTAGC...CTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAAACCTTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 90 bp | CTCAAATTGTTCATTAATTTGGCAGACTTCTGGAAAGCTCCAAACTaGAATTTCTCCATCTTCTGGGTCTGGTTCTTCTACCTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKLFINLADFWKAPN*NFSIFWVWFFYLQL Trigger: AAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | AACAAGACCAACTATATCCCTATCTTCCCCATCTCTAGCTGTTCCTCAAATCTGGCTAAGACCTTTCTTTaGCCTGAGGGTTTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: NKTNYIPIFPISSCSSNLAKTFL*PEGFLI Trigger: TATGAGAAAACCCTCAGGCAAAAGAAAGGTCTTAGC...CAGATTTGAGGAACAGCTAGAGATGGGGAAGATAGGGATATAGTTGGTCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 90 bp | ATCTTGATGTTGCCTCTCAAATTGTTCATTAATTTGGCAGACTTCTaGAAAGCTCCAAACTGGAATTTCTCCATCTTCTGGGTCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILMLPLKLFINLADF*KAPNWNFSIFWVWF Trigger: GAACCAGACCCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATTTGAGAGGCAACATCAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTGCTTGTTTCTCCCCAGACCTCATATGGTCTTTGTCACAGCTATCTGTGCTCTTGGTAATTATGTaGTCATTAGGGAGTCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: FSACFSPDLIWSLSQLSVLLVIM*SLGSLT Trigger: AGTTAGACTCCCTAATGACAACATAATTACCAAGAG...CACAGATAGCTGTGACAAAGACCATATGAGGTCTGGGGAGAAACAAGCAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS GCA 90 bp | ATGGGATCTCTGCATTGGAACAAGAAGGCCTGTGCTCAGATGAAATaGATTTCTAAAATCAGTATAGTTCTGGCCACTCTTGGTAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: MGSLHWNKKACAQMK*ISKISIVLATLGNY Trigger: ATAATTACCAAGAGTGGCCAGAACTATACTGATTTTAGAAATGCATTTCATCTGAGCACAGGCCTTCTTGTTCCAATGCAGAGATCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | CTTCATCTCTTCAAAGAAATTACACATACACTACGTTTTCAACTTGCATTAGGGATGAGAGATACCTCCTaGGTCTTCAGAGCCTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHLFKEITHTLRFQLALGMRDTS*VFRAYG Trigger: TCCATAGGCTCTGAAGACCAAGGAGGTATCTCTCAT...CCCTAATGCAAGTTGAAAACGTAGTGTATGTGTAATTTCTTTGAAGAGATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS-3UTR CAA 90 bp | AAATCATTCCTGGACTTGCTGTTTGCCAAAAGTTTTTGTGGAGAATGTGCCAGGCTCTTGGTAATTATGTaGTCATTAGGGAGTCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: KSFLDLLFAKSFCGECARLLVIM*SLGSLT Trigger: AGTTAGACTCCCTAATGACAACATAATTACCAAGAG...CCTGGCACATTCTCCACAAAAACTTTTGGCAAACAGCAAGTCCAGGAATGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 72 bp | ATAAATGAGAGATACCTCCTTGGTCTTCAGAGCCTATaGAAGCCACCTCACACACAGAAACGAGGTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: INERYLLGLQSL*KPPHTQKRGCC Trigger: ACAGCAACCTCGTTTCTGTGTGTGAGGTGGCTTCCATAGGCTCTGAAGACCAAGGAGGTATCTCTCATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CAA 72 bp | TCTCCATCTTCTGGGTCTGGTTCTTCTACCTCCAGCTaGATAATGAGATCTGGCTTAGTAACCTGCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSSGSGSSTSS*IMRSGLVTCCS Trigger: AGAGCAGCAGGTTACTAAGCCAGATCTCATTATCAAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CAA 90 bp | ACTGGAATTTCTCCATCTTCTGGGTCTGGTTCTTCTACCTCCAGCTaGATAATGAGATCTGGCTTAGTAACCTGCTGCTCTAAGGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: TGISPSSGSGSSTSS*IMRSGLVTCCSKDD Trigger: ATCATCCTTAGAGCAGCAGGTTACTAAGCCAGATCTCATTATCAAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGAGAAATTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 72 bp | AAAGCTCCAAACTGGAATTTCTCCATCTTCTGGGTCTaGTTCTTCTACCTCCAGCTTGATAATGAGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KAPNWNFSIFWV*FFYLQLDNEIW Trigger: CCAGATCTCATTATCAAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGAGAAATTCCAGTTTGGAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 72 bp | TTCTGGAAAGCTCCAAACTGGAATTTCTCCATCTTCTaGGTCTGGTTCTTCTACCTCCAGCTTGATAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: FWKAPNWNFSIF*VWFFYLQLDNE Trigger: CTCATTATCAAGCTGGAGGTAGAAGAACCAGACCCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 72 bp | TTCATTAATTTGGCAGACTTCTGGAAAGCTCCAAACTaGAATTTCTCCATCTTCTGGGTCTGGTTCTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FINLADFWKAPN*NFSIFWVWFFY Trigger: GTAGAAGAACCAGACCCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATTAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CCA 72 bp | TTGCCTCTCAAATTGTTCATTAATTTGGCAGACTTCTaGAAAGCTCCAAACTGGAATTTCTCCATCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPLKLFINLADF*KAPNWNFSIFW Trigger: CCAGAAGATGGAGAAATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATTTGAGAGGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CAA 90 bp | CTTATCTTGTTTATCTTGATGTTGCCTCTCAAATTGTTCATTAATTaGGCAGACTTCTGGAAAGCTCCAAACTGGAATTTCTCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LILFILMLPLKLFIN*ADFWKAPNWNFSIF Trigger: GAAGATGGAGAAATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATTTGAGAGGCAACATCAAGATAAACAAGATAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CAA 90 bp | CATCAACAGATACTTATCTTGTTTATCTTGATGTTGCCTCTCAAATaGTTCATTAATTTGGCAGACTTCTGGAAAGCTCCAAACTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HQQILILFILMLPLK*FINLADFWKAPNWN Trigger: ATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATTTGAGAGGCAACATCAAGATAAACAAGATAAGTATCTGTTGATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CAA 90 bp | ATTAGGGAGTCTAACTTGCATCAACAGATACTTATCTTGTTTATCTaGATGTTGCCTCTCAAATTGTTCATTAATTTGGCAGACTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IRESNLHQQILILFI*MLPLKLFINLADFW Trigger: CCAGAAGTCTGCCAAATTAATGAACAATTTGAGAGGCAACATCAAGATAAACAAGATAAGTATCTGTTGATGCAAGTTAGACTCCCTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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| CDS CAA 72 bp | TTTATCTTGATGTTGCCTCTCAAATTGTTCATTAATTaGGCAGACTTCTGGAAAGCTCCAAACTGGAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: FILMLPLKLFIN*ADFWKAPNWNF Trigger: GAAATTCCAGTTTGGAGCTTTCCAGAAGTCTGCCAAATTAATGAACAATTTGAGAGGCAACATCAAGATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040628.6 ENSMUST00000115333.9 ENSMUST00000115334.8 |
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