Pregenerated sensors for ZFP180 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057101Ensembl transcript IDs: ENSMUST00000068975.6, ENSMUST00000203854.3, ENSMUST00000206184.2, ENSMUST00000207002.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGTCCCACAGGTCCCTGTGGCCTTCCAGGATCACGGTTTTCTCTaGGGTTCTCTGGGCATTGTTCCACATGCTCTGTCCCTCCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: QVPQVPVAFQDHGFL*GSLGIVPHALSLLC Trigger: ACAGAGGAGGGACAGAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR CCA 90 bp | GCTCCTTCTGTTCCATGTACAGCTGGCAAGTCCCACAGGTCCCTGTaGCCTTCCAGGATCACGGTTTTCTCTGGGGTTCTCTGGGCATTG | + |
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Preference number: 1 (lower is better) Translates to: APSVPCTAGKSHRSL*PSRITVFSGVLWAL Trigger: CAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGACTTGCCAGCTGTACATGGAACAGAAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR CCA 90 bp | CTGCCTGCAGTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTaGGAGGTCGTGGCTCAGCCACCTAGTAGCATGAAGGAAAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: LPAVSRSEDSDGEMR*EVVAQPPSSMKEKS Trigger: GCTCTTTTCCTTCATGCTACTAGGTGGCTGAGCCACGACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCACTGCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR CCA 90 bp | AGGTCCCTGTGGCCTTCCAGGATCACGGTTTTCTCTGGGGTTCTCTaGGCATTGTTCCACATGCTCTGTCCCTCCTCTGTAAGGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: RSLWPSRITVFSGVL*ALFHMLCPSSVRST Trigger: TGTGGACCTTACAGAGGAGGGACAGAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCACAGGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR CCA 90 bp | GAAGATTGTCTGCTTTGCGGTGGCTCCTTCTGTTCCATGTACAGCTaGCAAGTCCCACAGGTCCCTGTGGCCTTCCAGGATCACGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: EDCLLCGGSFCSMYS*QVPQVPVAFQDHGF Trigger: AAAACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGACTTGCCAGCTGTACATGGAACAGAAGGAGCCACCGCAAAGCAGACAATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR GCA 90 bp | TGGGTAAAGGCCACCTCCTCTTGCTTGTTCGGTTGTTTCCCCGACTaGTCCTTACAGTCTCGGACTTCTTCACATGTTGACAGCCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: WVKATSSCLFGCFPD*SLQSRTSSHVDSQG Trigger: CCCTTGGCTGTCAACATGTGAAGAAGTCCGAGACTGTAAGGAGCAGTCGGGGAAACAACCGAACAAGCAAGAGGAGGTGGCCTTTACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR CCA 90 bp | CTCTGTACGAAGTGCTTTGGGAAACAACTTCTGCCAGTCAGGAAGTaGCCTTCTGAGCTTGGCTTAGGGATGACGCCTGCACAGTCATTC | + |
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Preference number: 1 (lower is better) Translates to: LCTKCFGKQLLPVRK*PSELGLGMTPAQSF Trigger: GAATGACTGTGCAGGCGTCATCCCTAAGCCAAGCTCAGAAGGCCACTTCCTGACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR TCA 90 bp | GATGCTCTGAGGAACTGCCCCAGCTGTGTCATCTTCAAGGAGATCTaGGCTATCACTGATCTTTTGGTGACTGCTTGCAACGACATCACC | + |
|
Preference number: 1 (lower is better) Translates to: DALRNCPSCVIFKEI*AITDLLVTACNDIT Trigger: GGTGATGTCGTTGCAAGCAGTCACCAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGATGACACAGCTGGGGCAGTTCCTCAGAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR GCA 90 bp | AGAAGCTCCTGTTGCCCACCGAGGACCACGCTATGGTTTAAAACTTaGCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACT | + |
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Preference number: 1 (lower is better) Translates to: RSSCCPPRTTLWFKT*PRPLKPKVLPSKGT Trigger: AGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCATAGCGTGGTCCTCGGTGGGCAACAGGAGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR TCA 90 bp | TCCTCTGTAAGGTCCACAGTTACAATCTTGAAGTCTGTGCTTTCCTaGGGCATGATGTCCAGTGACCCAGCATCTTCTCCCTCCACTTCA | + |
|
Preference number: 1 (lower is better) Translates to: SSVRSTVTILKSVLS*GMMSSDPASSPSTS Trigger: TGAAGTGGAGGGAGAAGATGCTGGGTCACTGGACATCATGCCTCAGGAAAGCACAGACTTCAAGATTGTAACTGTGGACCTTACAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR TCA 90 bp | CTCACACTGTCACTTCCTGCCAAATGCATTCCTTCCCACATAACTTaGGAGGATTGGATCAGTCCAGGAGTCAACATCAGCTCTGACTCT | + |
|
Preference number: 1 (lower is better) Translates to: LTLSLPAKCIPSHIT*EDWISPGVNISSDS Trigger: AGAGTCAGAGCTGATGTTGACTCCTGGACTGATCCAATCCTCTCAAGTTATGTGGGAAGGAATGCATTTGGCAGGAAGTGACAGTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR GCA 90 bp | TTACTCCTTTCTTTCGTCGACATGGGGGTAAGGAAAGGGTCTATGTaGATTCTTCTCACACTGTCACTTCCTGCCAAATGCATTCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LLLSFVDMGVRKGSM*ILLTLSLPAKCIPS Trigger: GGAAGGAATGCATTTGGCAGGAAGTGACAGTGTGAGAAGAATGCACATAGACCCTTTCCTTACCCCCATGTCGACGAAAGAAAGGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR GCA 90 bp | GGTAAGGAAAGGGTCTATGTGCATTCTTCTCACACTGTCACTTCCTaGCAAATGCATTCCTTCCCACATAACTTGAGAGGATTGGATCAG | + |
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Preference number: 1 (lower is better) Translates to: GKERVYVHSSHTVTS*QMHSFPHNLRGLDQ Trigger: CTGATCCAATCCTCTCAAGTTATGTGGGAAGGAATGCATTTGGCAGGAAGTGACAGTGTGAGAAGAATGCACATAGACCCTTTCCTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR GCA 90 bp | ACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCTGTACGAAGTaGTTTGGGAAACAACTTCTGCCAGTCAGGAAGTGGCCTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: TFSFSKSSFCLLCTK*FGKQLLPVRKWPSE Trigger: CTCAGAAGGCCACTTCCTGACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR TCA 90 bp | GCTGTGTCATCTTCAAGGAGATCTGAGCTATCACTGATCTTTTGGTaGCTGCTTGCAACGACATCACCATGCAACTTTTTAACATGTGAC | + |
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Preference number: 1 (lower is better) Translates to: AVSSSRRSELSLIFW*LLATTSPCNFLTCD Trigger: GTCACATGTTAAAAAGTTGCATGGTGATGTCGTTGCAAGCAGTCACCAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGATGACACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR GCA 90 bp | TGTTTCCTTTCTTTTCTTTTCTTTCTCTTTCTTTCAAGACAGTCTTaGTATGTAGCACAGGCTGGTCTTGAATGGTCCTCTAGCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: CFLSFLFFLFLSRQS*YVAQAGLEWSSSFT Trigger: AGTGAAGCTAGAGGACCATTCAAGACCAGCCTGTGCTACATAGCAAGACTGTCTTGAAAGAAAGAGAAAGAAAAGAAAAGAAAGGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR CAA 90 bp | GCCAGCGCTACCCTGGGTAAAGGCCACCTCCTCTTGCTTGTTCGGTaGTTTCCCCGACTGCTCCTTACAGTCTCGGACTTCTTCACATGT | + |
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Preference number: 2 (lower is better) Translates to: ASATLGKGHLLLLVR*FPRLLLTVSDFFTC Trigger: ACATGTGAAGAAGTCCGAGACTGTAAGGAGCAGTCGGGGAAACAACCGAACAAGCAAGAGGAGGTGGCCTTTACCCAGGGTAGCGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCGTGGCTAGCCACCTAGTAGCATaGAGGAAAAGAGCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: AVSRSEDSDGEMRWEVVASHLVA*RKRARG Trigger: GCCTCTGGCTCTTTTCCTTCATGCTACTAGGTGGCT...AGCCACGACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGTCGTGGCTCAGCCACCTAGTAGCATGAAGGAAAAGAGCCAGAGGCAGAGCCACCTAGTAGCATaGAGGAAAAGAGCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: WEVVAQPPSSMKEKSQRQSHLVA*RKRARG Trigger: GCCTCTGGCTCTTTTCCTTCATGCTACTAGGTGGCT...CTGCCTCTGGCTCTTTTCCTTCATGCTACTAGGTGGCTGAGCCACGACCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGGGCTTCAGAGGACTCGGGCCCTaGCAACTCAATGGCCACCCG | + |
|
Preference number: 2 (lower is better) Translates to: NREAVLSKTRPELKLEGFRGLGP*QLNGHP Trigger: CGGGTGGCCATTGAGTTGTCAGGGCCCGAGTCCTCT...GAAGCCCTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTTACGAACTGAGAGGGGCGGATGCTCTGAGGAACTGCCCCAGCTGTGTCGACTTCTTCACATGTTaGCAGCCAAGGGTCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: AAYELRGADALRNCPSCVDFFTC*QPRVIS Trigger: AGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTC...GACACAGCTGGGGCAGTTCCTCAGAGCATCCGCCCCTCTCAGTTCGTAAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATGTACAGCTGGCAAGTCCCACAGGTCCCTGTGGCCTTCCAGGATCACGGAAGTCTGTGCTTTCCTaGGGCATGATGTCCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: FHVQLASPTGPCGLPGSRKSVLS*GMMSSD Trigger: GTCACTGGACATCATGCCTCAGGAAAGCACAGACTT...CCGTGATCCTGGAAGGCCACAGGGACCTGTGGGACTTGCCAGCTGTACATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTACTCTGATGGGGAGATaGGGTGGGAGGTCGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: MKEKSQRQDSKADGQQLLTLMGR*GGRSWL Trigger: GAGCCACGACCTCCCACCTCATCTCCCCATCAGAGT...AAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR CAA 90 bp | AGTGATGGGGTTTTAGCATGGGCTTACCTCCATGCTGGTCCAAGCTaGACCCTGCTTGTGGATTTCCTGAAACAGGCAGCTCATGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SDGVLAWAYLHAGPS*TLLVDFLKQAAHGQ Trigger: CTGGCCATGAGCTGCCTGTTTCAGGAAATCCACAAGCAGGGTCAAGCTTGGACCAGCATGGAGGTAAGCCCATGCTAAAACCCCATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR CAA 90 bp | CTGTGGCCTTCCAGGATCACGGTTTTCTCTGGGGTTCTCTGGGCATaGTTCCACATGCTCTGTCCCTCCTCTGTAAGGTCCACAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: LWPSRITVFSGVLWA*FHMLCPSSVRSTVT Trigger: TGTAACTGTGGACCTTACAGAGGAGGGACAGAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGGCCGGCTGGTACTCAGGCAACTCCTGTCAGGGTCATGACCCCTGTAGAGACTTCTTCACATGTTaGCAGCCAAGGGTCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: MKAGWYSGNSCQGHDPCRDFFTC*QPRVIS Trigger: AGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTC...TCTACAGGGGTCATGACCCTGACAGGAGTTGCCTGAGTACCAGCCGGCCTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTACAGCTGGCAAGTCCCACAGGTCCCTGTGGCCTTCCAGGATCACGGTTTGACTTCTTCACATGTTaGCAGCCAAGGGTCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: HVQLASPTGPCGLPGSRFDFFTC*QPRVIS Trigger: AGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTC...AAACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGACTTGCCAGCTGTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCAAGTCCCACAGGTCCCTGTGGCCTTCCAGGATCACGGTTTTCTCTGGCCACAGTTACAATCTTaGAGTCTGTGCTTTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SWQVPQVPVAFQDHGFLWPQLQS*SLCFPE Trigger: CTCAGGAAAGCACAGACTTCAAGATTGTAACTGTGG...CCAGAGAAAACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGACTTGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCGTGGCTCACACTGTCACTTCCTaGCAAATGCATTCCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: AVSRSEDSDGEMRWEVVAHTVTS*QMHSFP Trigger: TGGGAAGGAATGCATTTGGCAGGAAGTGACAGTGTG...AGCCACGACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTTACGAACTGAGAGGGGCGGATGCTCTGAGGAACTGCCCCAGCTGTGTCGCCTGTTTATGGAAATaGTTTCTGAGGGGTATCATG | + |
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Preference number: 2 (lower is better) Translates to: AAYELRGADALRNCPSCVACLWK*FLRGIM Trigger: CATGATACCCCTCAGAAACCATTTCCATAAACAGGC...GACACAGCTGGGGCAGTTCCTCAGAGCATCCGCCCCTCTCAGTTCGTAAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR CAA 90 bp | GTTGTTTCCCCGACTGCTCCTTACAGTCTCGGACTTCTTCACATGTaGACAGCCAAGGGTCATCTCTTGCCGACCCCTCTAGCTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: VVSPTAPYSLGLLHM*TAKGHLLPTPLASI Trigger: GATTGAAGCTAGAGGGGTCGGCAAGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTCCGAGACTGTAAGGAGCAGTCGGGGAAACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203854.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGCCCGTCTGCCTGCAGTaGGTAGGTCTGAAGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCNREAVLSKTRPELKLEPVCLQ*VGLKTL Trigger: CAGAGTCTTCAGACCTACTCACTGCAGGCAGACGGG...CTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGATTGGATCAGTCCAGGAGTCAACATCAGCTCTGACTCTCAACTGGTCAGGCCTGATGGCACGGAATaGCTAGTGAGGACAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: EDWISPGVNISSDSQLVRPDGTE*LVRTAE Trigger: TTCTGCTGTCCTCACTAGTCATTCCGTGCCATCAGG...CCTGACCAGTTGAGAGTCAGAGCTGATGTTGACTCCTGGACTGATCCAATCCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTTCCTTGCTTGTGGATTTCCTaGAACAGGCAGCTCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: RKRARGRTAKLMASSYFPCLWIS*NRQLMA Trigger: GGCCATGAGCTGCCTGTTTCAGGAAATCCACAAGCA...AGGAAAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGATTGGATCAGTCCAGGAGTCAACATCAGCTCTGACTCTCAACTGGTCAGGATGCTGGTCCAAGCTTaGCCCTGCTTGTGGATTTCC | + |
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Preference number: 2 (lower is better) Translates to: EDWISPGVNISSDSQLVRMLVQA*PCLWIS Trigger: GGAAATCCACAAGCAGGGTCAAGCTTGGACCAGCAT...CCTGACCAGTTGAGAGTCAGAGCTGATGTTGACTCCTGGACTGATCCAATCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGTCGTGGCTCAGCCACCTAGTAGCATGAAGGAAAAGAGCCAGAGGCAGCTGTACGAAGTGCTTTaGGAAACAACTTCTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WEVVAQPPSSMKEKSQRQLYEVL*ETTSAS Trigger: ACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAG...CTGCCTCTGGCTCTTTTCCTTCATGCTACTAGGTGGCTGAGCCACGACCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCGTGGCTCAGTGTGACGCCTGTTTATaGAAATGGTTTCTGAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: VSRSEDSDGEMRWEVVAQCDACL*KWFLRG Trigger: ACCCCTCAGAAACCATTTCCATAAACAGGCGTCACA...CTGAGCCACGACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGACAGGAAGTGGCCTTCTaGGCTTGGCTTAGGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: ALQQRSCALKDQARTQTRQEVAF*AWLRDD Trigger: GTCATCCCTAAGCCAAGCTCAGAAGGCCACTTCCTG...TCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTCTCCGGAGACCTCTTATCCACATCTGCCAAACTGAAGGCTTTACTCCTCACTGTAGGGGGCTTTaGGGGCAAGGGAGTCCATTC | + |
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Preference number: 2 (lower is better) Translates to: FLLRRPLIHICQTEGFTPHCRGL*GQGSPF Trigger: GAATGGACTCCCTTGCCCTCAAAGCCCCCTACAGTG...AGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTCTCCGGAGAAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | TTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGATGCTGGTCCAAGCTTaGCCCTGCTTGTGGATTTCC | + |
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Preference number: 2 (lower is better) Translates to: LQSVSFATEKLCSQRPGQMLVQA*PCLWIS Trigger: GGAAATCCACAAGCAGGGTCAAGCTTGGACCAGCAT...CTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGGAAACAGGCAGCTCATaGCCAGCATCCACAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: LQSVSFATEKLCSQRPGQETGSS*PASTGT Trigger: TGTTCCTGTGGATGCTGGCCATGAGCTGCCTGTTTC...CTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTTCCTTCCTATGTTGTCTCCTaGTGGCACGGAATGACTAGT | + |
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Preference number: 2 (lower is better) Translates to: RKRARGRTAKLMASSYFPSYVVS*WHGMTS Trigger: ACTAGTCATTCCGTGCCATCAGGAGACAACATAGGA...AGGAAAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTCACGGTCAAATACCGTaGTCCAGTGGAAGGTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: MKEKSQRQDSKADGQQLLHGQIP*SSGRSK Trigger: CTTAGACCTTCCACTGGATCACGGTATTTGACCGTG...AAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGGGCTTCCACGGTCAAATACCGTaGTCCAGTGGAAGGTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: NREAVLSKTRPELKLEGFHGQIP*SSGRSK Trigger: CTTAGACCTTCCACTGGATCACGGTATTTGACCGTG...GAAGCCCTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACAGTCTCGGACTTCTTCACATGTTGACAGCCAAGGGTCATCTCTTGCCGACTTCTCTGGGGTTCTCTaGGCATTGTTCCACATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LQSRTSSHVDSQGSSLADFSGVL*ALFHML Trigger: GAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAA...GTCGGCAAGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTCCGAGACTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTTCCTATGTTGTCTCCTaGTGGCACGGAATGACTAGT | + |
|
Preference number: 2 (lower is better) Translates to: MKEKSQRQDSKADGQQLLSYVVS*WHGMTS Trigger: ACTAGTCATTCCGTGCCATCAGGAGACAACATAGGA...AAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGGTGGAAGGTCTAAGATaGGTCACCACAACACACCCA | + |
|
Preference number: 2 (lower is better) Translates to: LCNREAVLSKTRPELKLEVEGLR*VTTTHP Trigger: TGGGTGTGTTGTGGTGACTCATCTTAGACCTTCCAC...CTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGATTGGATCAGTCCAGGAGTCAACATCAGCTCTGACTCTCAACTGGTCAGGTCACTGATCTTTTGGTaGCTGCTTGCAACGACATCA | + |
|
Preference number: 2 (lower is better) Translates to: EDWISPGVNISSDSQLVRSLIFW*LLATTS Trigger: TGATGTCGTTGCAAGCAGTCACCAAAAGATCAGTGA...CCTGACCAGTTGAGAGTCAGAGCTGATGTTGACTCCTGGACTGATCCAATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTTCTCCGGAGACCTCTTATCCACATCTGCCAAACTGAAGGCTTTACTCCTGCAACAGAGAAGCTGTaGTCTCAAAGACCAGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: FLLRRPLIHICQTEGFTPATEKL*SQRPGQ Trigger: CTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGC...AGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTCTCCGGAGAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | TTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGACAGAGTGTCAGCTTTaGAACAGAGAAGCTGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LQSVSFATEKLCSQRPGQTECQL*NREAVL Trigger: GAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGT...CTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTGATCTGAGCTATCACTaGTCTTTTGGTGACTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: MKEKSQRQDSKADGQQLLDLSYH*SFGDCL Trigger: CAAGCAGTCACCAAAAGATCAGTGATAGCTCAGATC...AAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGACTGCTCCTTACAGTCTCGGACTTCTTCACATGTTGACAGCCAAGGGTCATAGGAAAGGGTCTATGTaGATTCTTCTCACACTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PTAPYSLGLLHMLTAKGHRKGSM*ILLTLS Trigger: TGACAGTGTGAGAAGAATGCACATAGACCCTTTCCT...ATGACCCTTGGCTGTCAACATGTGAAGAAGTCCGAGACTGTAAGGAGCAGTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGCTTAGGGATGACGCCTaGACAGTCATTCAAGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: LCNREAVLSKTRPELKLELRDDA*TVIQEH Trigger: GTGTTCTTGAATGACTGTGCAGGCGTCATCCCTAAG...CTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTTCCTCTTCTCTGTACGAAGTaGTTTGGGAAACAACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RKRARGRTAKLMASSYFPLLCTK*FGKQLL Trigger: CAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAG...AGGAAAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGACCACGCTATGGTTTAAAACTTGCCCGCGCCCTTTAAAGCCAAAGGTTTTACACACTGTCACTTCCTaGCAAATGCATTCCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RTTLWFKTCPRPLKPKVLHTVTS*QMHSFP Trigger: TGGGAAGGAATGCATTTGGCAGGAAGTGACAGTGTG...TAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCATAGCGTGGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTTCTCCGGAGACCTCTTATCCACATCTGCCAAACTGAAGGCTTTACTCCTCACACTGTCACTTCCTaGCAAATGCATTCCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FLLRRPLIHICQTEGFTPHTVTS*QMHSFP Trigger: TGGGAAGGAATGCATTTGGCAGGAAGTGACAGTGTG...AGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTCTCCGGAGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTTGGGAAACAACTTCTGCCAGTCAGGAAGTGGCCTTCTGAGCTTGGCTTAAGGAAAGGGTCTATGTaGATTCTTCTCACACTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CFGKQLLPVRKWPSELGLRKGSM*ILLTLS Trigger: TGACAGTGTGAGAAGAATGCACATAGACCCTTTCCT...TAAGCCAAGCTCAGAAGGCCACTTCCTGACTGGCAGAAGTTGTTTCCCAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGGGCTTCCTTCTCTGTACGAAGTaGTTTGGGAAACAACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NREAVLSKTRPELKLEGFLLCTK*FGKQLL Trigger: CAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAG...GAAGCCCTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGCAACAGAGAAGCTGTaGTCTCAAAGACCAGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LNLQSVSFATEKLCSQRPATEKL*SQRPGQ Trigger: CTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGC...TGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGAGGGAGTCCATTCCTTaGCTGAGAATGAGCTTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LCNREAVLSKTRPELKLERESIP*LRMSLV Trigger: AACTAAGCTCATTCTCAGCCAAGGAATGGACTCCCT...CTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGATTGGATCAGTCCAGGAGTCAACATCAGCTCTGACTCTCAACTGGTCAGGAGAACACATACCTCCTaGACTAAATTTACAGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: EDWISPGVNISSDSQLVRRTHTS*TKFTEC Trigger: ACACTCTGTAAATTTAGTTCAGGAGGTATGTGTTCT...CCTGACCAGTTGAGAGTCAGAGCTGATGTTGACTCCTGGACTGATCCAATCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAAATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCACAGGCTGGTCTTGAATaGTCCTCTAGCTTCACTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LNLQSVSFATEKLCSQRPQAGLE*SSSFTH Trigger: GTGAGTGAAGCTAGAGGACCATTCAAGACCAGCCTG...TGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTTCCTGTAGTTCATTTCAACTaGTCGTTTGCCTTAGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RKRARGRTAKLMASSYFPVVHFN*SFALVV Trigger: TACAACTAAGGCAAACGACCAGTTGAAATGAACTAC...AGGAAAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGACAAGAACATATCTCTaGGTAAAGGACTTCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LCNREAVLSKTRPELKLETRTYL*VKDFPH Trigger: GTGTGGGAAGTCCTTTACCCAGAGATATGTTCTTGT...CTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTAGAACACATACCTCCTaGACTAAATTTACAGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: MKEKSQRQDSKADGQQLLRTHTS*TKFTEC Trigger: ACACTCTGTAAATTTAGTTCAGGAGGTATGTGTTCT...AAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGATAAACTTTTATTCCTTGTACCATGTTATAGCACAACATGCATCTCTGAGACACTGTAGGGGGCTTTaGGGGCAAGGGAGTCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: LINFYSLYHVIAQHASLRHCRGL*GQGSPF Trigger: GAATGGACTCCCTTGCCCTCAAAGCCCCCTACAGTG...TCTCAGAGATGCATGTTGTGCTATAACATGGTACAAGGAATAAAAGTTTATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAATCTTCAAGGAGATCTaGGCTATCACTGATCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ALQQRSCALKDQARTQTRIFKEI*AITDLL Trigger: CAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGAT...TCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | GACCTCTTATCCACATCTGCCAAACTGAAGGCTTTACTCCTTTCTTTCGTCGACTCACTTCCTGCCAAATaGATTCCTTCCCACATAACT | + |
|
Preference number: 2 (lower is better) Translates to: DLLSTSAKLKALLLSFVDSLPAK*IPSHIT Trigger: AGTTATGTGGGAAGGAATGCATTTGGCAGGAAGTGA...GTCGACGAAAGAAAGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCCTCTTATCCACATCTaGCAAACTGAAGGCTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: NLQSVSFATEKLCSQRPGPLIHI*QTEGFT Trigger: AGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGG...GCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACTTTCTCATTTAGACTTAGGGATGACGCCTaGACAGTCATTCAAGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: PRPLKPKVLPSKGTFSFRLRDDA*TVIQEH Trigger: GTGTTCTTGAATGACTGTGCAGGCGTCATCCCTAAG...TCTAAATGAGAAAGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTTGCCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACTTTCTCATCTTCAAGGAGATCTaGGCTATCACTGATCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: NLPAPFKAKGFTFQRNFLIFKEI*AITDLL Trigger: CAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGAT...GAGAAAGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTTAAAACTTGCCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGACCTCTTATCCACATCTaGCAAACTGAAGGCTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: WFKTCPRPLKPKVLPSKGPLIHI*QTEGFT Trigger: AGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGG...TCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACTTTCTCATTTAGATCTAAGTCTAGCTTCTaGCTTCTCTGTACGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PRPLKPKVLPSKGTFSFRSKSSF*LLCTKC Trigger: GCACTTCGTACAGAGAAGGCAGAAGCTAGACTTAGA...TCTAAATGAGAAAGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCATCTAAGTCTAGCTTCTaGCTTCTCTGTACGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LNLQSVSFATEKLCSQRPSKSSF*LLCTKC Trigger: GCACTTCGTACAGAGAAGGCAGAAGCTAGACTTAGA...TGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACTTTCTCATTTAGACTGTACGAAGTGCTTTaGGAAACAACTTCTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PRPLKPKVLPSKGTFSFRLYEVL*ETTSAS Trigger: ACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAG...TCTAAATGAGAAAGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGATAAACTTTTATTCCTTGTACCATGTTATAGCACAACATGCATCTCTGAGACCTGATGGCACGGAATaGCTAGTGAGGACAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LINFYSLYHVIAQHASLRPDGTE*LVRTAE Trigger: TTCTGCTGTCCTCACTAGTCATTCCGTGCCATCAGG...TCTCAGAGATGCATGTTGTGCTATAACATGGTACAAGGAATAAAAGTTTATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTAAATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCCTTCTCTGTACGAAGTaGTTTGGGAAACAACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TKFTECQLCNREAVLSKTLLCTK*FGKQLL Trigger: CAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAG...GGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGATAAACTTTTATTCCTTGTACCATGTTATAGCACAACATGCATCTCTGAGAGATGCTCTGAGGAACTaGCCCAGCTGTGTCATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LINFYSLYHVIAQHASLRDALRN*PSCVIF Trigger: GAAGATGACACAGCTGGGGCAGTTCCTCAGAGCATC...TCTCAGAGATGCATGTTGTGCTATAACATGGTACAAGGAATAAAAGTTTATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACTTTCTCATTTAGAGCAACGACATCACCATaGAACTTTTTAACATGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PRPLKPKVLPSKGTFSFRATTSP*NFLTCD Trigger: GTCACATGTTAAAAAGTTGCATGGTGATGTCGTTGC...TCTAAATGAGAAAGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCTGTAGGAAAGGGTCTATGTaGATTCTTCTCACACTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AVFDLTFSFSKSSFCLLCRKGSM*ILLTLS Trigger: TGACAGTGTGAGAAGAATGCACATAGACCCTTTCCT...ACAGAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCTGTCCTCTTATCCACATCTaGCAAACTGAAGGCTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: AVFDLTFSFSKSSFCLLCPLIHI*QTEGFT Trigger: AGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGG...ACAGAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGATAAACTTTTATTCCTTGTACCATGTTATAGCACAACATGCATCTCTGAGACTGTACGAAGTGCTTTaGGAAACAACTTCTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LINFYSLYHVIAQHASLRLYEVL*ETTSAS Trigger: ACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAG...TCTCAGAGATGCATGTTGTGCTATAACATGGTACAAGGAATAAAAGTTTATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000207002.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTCTGCACTAAACTTGCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTTCACTTCCTGCCAAATaGATTCCTTCCCACATAACT | + |
|
Preference number: 2 (lower is better) Translates to: GFCTKLAVFDLTFSFSKSSLPAK*IPSHIT Trigger: AGTTATGTGGGAAGGAATGCATTTGGCAGGAAGTGA...AGACTTAGAAAAACTGAATGTTAGATCAAATACTGCAAGTTTAGTGCAGAAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGGTCGTGGCTCAGCCACCTAGTAGCATGAAGGAAAAGAGCCAGAGGCAGGCCAAGGGTCATCTCTaGCCGACCCCTCTAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WEVVAQPPSSMKEKSQRQAKGHL*PTPLAS Trigger: TGAAGCTAGAGGGGTCGGCAAGAGATGACCCTTGGC...CTGCCTCTGGCTCTTTTCCTTCATGCTACTAGGTGGCTGAGCCACGACCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203854.3 |
||
| 3UTR CCA 72 bp | CTGCTTTGCGGTGGCTCCTTCTGTTCCATGTACAGCTaGCAAGTCCCACAGGTCCCTGTGGCCTTCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLCGGSFCSMYS*QVPQVPVAFQD Trigger: ATCCTGGAAGGCCACAGGGACCTGTGGGACTTGCCAGCTGTACATGGAACAGAAGGAGCCACCGCAAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR GCA 72 bp | CTCCTTGTGGGCTGCTTACGAACTGAGAGGGGCGGATaGTCTGAGGAACTGCCCCAGCTGTGTCATCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLVGCLRTERGG*SEELPQLCHLQ Trigger: TTGAAGATGACACAGCTGGGGCAGTTCCTCAGAGCATCCGCCCCTCTCAGTTCGTAAGCAGCCCACAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR CCA 72 bp | CAGGTCCCTGTGGCCTTCCAGGATCACGGTTTTCTCTaGGGTTCTCTGGGCATTGTTCCACATGCTCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QVPVAFQDHGFL*GSLGIVPHALS Trigger: GGACAGAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCACAGGGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR CCA 72 bp | GTTCCATGTACAGCTGGCAAGTCCCACAGGTCCCTGTaGCCTTCCAGGATCACGGTTTTCTCTGGGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VPCTAGKSHRSL*PSRITVFSGVL Trigger: GAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGACTTGCCAGCTGTACATGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGGCCGGCTGGTACTCAGGCAACTCCTGTCAGGGTCATGACCCCTGTAGAAAAGGCCACCTCCTCTaGCTTGTTCGGTTGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: MKAGWYSGNSCQGHDPCRKGHLL*LVRLFP Trigger: GGGAAACAACCGAACAAGCAAGAGGAGGTGGCCTTT...TCTACAGGGGTCATGACCCTGACAGGAGTTGCCTGAGTACCAGCCGGCCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGCAGTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCAAAGGCCACCTCCTCTaGCTTGTTCGGTTGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPAVSRSEDSDGEMRWEVKGHLL*LVRLFP Trigger: GGGAAACAACCGAACAAGCAAGAGGAGGTGGCCTTT...GACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCACTGCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGGACTTCTTCACATGTTGACAGCCAAGGGTCATCTCTTGCCGACCCCTCTAGGGGTTCTCTGGGCATaGTTCCACATGCTCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGLLHMLTAKGHLLPTPLGVLWA*FHMLCP Trigger: GGGACAGAGCATGTGGAACAATGCCCAGAGAACCCC...TAGAGGGGTCGGCAAGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR CCA 72 bp | GTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTaGGAGGTCGTGGCTCAGCCACCTAGTAGCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSRSEDSDGEMR*EVVAQPPSSMK Trigger: CTTCATGCTACTAGGTGGCTGAGCCACGACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR CCA 72 bp | TGGCCTTCCAGGATCACGGTTTTCTCTGGGGTTCTCTaGGCATTGTTCCACATGCTCTGTCCCTCCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WPSRITVFSGVL*ALFHMLCPSSV Trigger: TACAGAGGAGGGACAGAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR TCA 72 bp | TGGGAAACAACTTCTGCCAGTCAGGAAGTGGCCTTCTaGGCTTGGCTTAGGGATGACGCCTGCACAGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: WETTSASQEVAF*AWLRDDACTVI Trigger: AATGACTGTGCAGGCGTCATCCCTAAGCCAAGCTCAGAAGGCCACTTCCTGACTGGCAGAAGTTGTTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR GCA 72 bp | GCCACCTCCTCTTGCTTGTTCGGTTGTTTCCCCGACTaGTCCTTACAGTCTCGGACTTCTTCACATGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ATSSCLFGCFPD*SLQSRTSSHVD Trigger: GTCAACATGTGAAGAAGTCCGAGACTGTAAGGAGCAGTCGGGGAAACAACCGAACAAGCAAGAGGAGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR CCA 72 bp | ACAAGAAGCTCCTGTTGCCCACCGAGGACCACGCTATaGTTTAAAACTTGCCCGCGCCCTTTAAAGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TRSSCCPPRTTL*FKTCPRPLKPK Trigger: CTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCATAGCGTGGTCCTCGGTGGGCAACAGGAGCTTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTTTATGGAAATGGTTTCTGAGGGGTATCATGGGGAATGAAGGCCGGCTGCTCTTGCTTGTTCGGTaGTTTCCCCGACTGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ACLWKWFLRGIMGNEGRLLLLVR*FPRLLL Trigger: AAGGAGCAGTCGGGGAAACAACCGAACAAGCAAGAG...CAGCCGGCCTTCATTCCCCATGATACCCCTCAGAAACCATTTCCATAAACAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGTTTCTGAGGGGTATCATGGGGAATGAAGGCCGGCTGGTACTCAGGCAACTCTTGCTTGTTCGGTaGTTTCCCCGACTGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KWFLRGIMGNEGRLVLRQLLLVR*FPRLLL Trigger: AAGGAGCAGTCGGGGAAACAACCGAACAAGCAAGAG...TTGCCTGAGTACCAGCCGGCCTTCATTCCCCATGATACCCCTCAGAAACCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR GCA 72 bp | TGTTGCCCACCGAGGACCACGCTATGGTTTAAAACTTaGCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CCPPRTTLWFKT*PRPLKPKVLPS Trigger: GGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCATAGCGTGGTCCTCGGTGGGCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR TCA 72 bp | TCTTCTCCGGAGACCTCTTATCCACATCTGCCAAACTaGAGGCTTTACTCCTTTCTTTCGTCGACATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSPETSYPHLPN*RLYSFLSSTWG Trigger: CCCCCATGTCGACGAAAGAAAGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTCTCCGGAGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR TCA 72 bp | AGGTCCACAGTTACAATCTTGAAGTCTGTGCTTTCCTaGGGCATGATGTCCAGTGACCCAGCATCTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RSTVTILKSVLS*GMMSSDPASSP Trigger: GGGAGAAGATGCTGGGTCACTGGACATCATGCCTCAGGAAAGCACAGACTTCAAGATTGTAACTGTGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCTCTGTACGAAGTGCTTTGGGAAACAACTTCTGCCAGTCAGGAAGTGGCCATAACTTGAGAGGATaGGATCAGTCCAGGAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AFSVRSALGNNFCQSGSGHNLRG*DQSRSQ Trigger: TTGACTCCTGGACTGATCCAATCCTCTCAAGTTATG...GCCACTTCCTGACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGACCTCGGCCAGAAGCTaGAACATGGCCATTAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LCNREAVLSKTRPELKLETSARS*NMAIKF Trigger: GAACTTAATGGCCATGTTCAAGCTTCTGGCCGAGGT...CTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR TCA 72 bp | ACGGTCAAATACCGTGATCCAGTGGAAGGTCTAAGATaGGTCACCACAACACACCCACCAGTCAACTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TVKYRDPVEGLR*VTTTHPPVNCS Trigger: TGAACAGTTGACTGGTGGGTGTGTTGTGGTGACTCATCTTAGACCTTCCACTGGATCACGGTATTTGACCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR GCA 72 bp | TCTTTCGTCGACATGGGGGTAAGGAAAGGGTCTATGTaGATTCTTCTCACACTGTCACTTCCTGCCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: SFVDMGVRKGSM*ILLTLSLPAKC Trigger: GCATTTGGCAGGAAGTGACAGTGTGAGAAGAATGCACATAGACCCTTTCCTTACCCCCATGTCGACGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR GCA 72 bp | TCCATGGGATGGTTCTTCATTGAAGATTGTCTGCTTTaGGGTGGCTCCTTCTGTTCCATGTACAGCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SMGWFFIEDCLL*GGSFCSMYSWQ Trigger: TTGCCAGCTGTACATGGAACAGAAGGAGCCACCGCAAAGCAGACAATCTTCAATGAAGAACCATCCCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| 3UTR CCA 72 bp | AGAGTAGTTTCTCAGGCTCTGAGGAAGAGACGGACTTaGGGCGGTTTTACATTTATCCTGGCCCTCTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RVVSQALRKRRT*GGFTFILALFN Trigger: GTTAAAGAGGGCCAGGATAAATGTAAAACCGCCCCAAGTCCGTCTCTTCCTCAGAGCCTGAGAAACTACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGCCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACTTTCTCTCTGTACGAAGTGCTTaGGGAAACAACTTCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLPAPFKAKGFTFQRNFLSVRSA*GNNFCQ Trigger: CTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGA...GAGAAAGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR TCA 72 bp | TCACTTCCTGCCAAATGCATTCCTTCCCACATAACTTaGGAGGATTGGATCAGTCCAGGAGTCAACATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLPAKCIPSHIT*EDWISPGVNIS Trigger: GCTGATGTTGACTCCTGGACTGATCCAATCCTCTCAAGTTATGTGGGAAGGAATGCATTTGGCAGGAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR TCA 72 bp | CAGCTGTGTCATCTTCAAGGAGATCTGAGCTATCACTaGTCTTTTGGTGACTGCTTGCAACGACATCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QLCHLQGDLSYH*SFGDCLQRHHH Trigger: ATGGTGATGTCGTTGCAAGCAGTCACCAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGATGACACAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTAAAACTTGCCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGACATAACTTGAGAGGATaGGATCAGTCCAGGAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WFKTCPRPLKPKVLPSKGHNLRG*DQSRSQ Trigger: TTGACTCCTGGACTGATCCAATCCTCTCAAGTTATG...TCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR GCA 72 bp | ACAGTTTTTCTTCTCCGGAGACCTCTTATCCACATCTaGCAAACTGAAGGCTTTACTCCTTTCTTTCGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: TVFLLRRPLIHI*QTEGFTPFFRR Trigger: TCGACGAAAGAAAGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTCTCCGGAGAAGAAAAACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR TCA 72 bp | TCTTCAAGGAGATCTGAGCTATCACTGATCTTTTGGTaGCTGCTTGCAACGACATCACCATGCAACTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSRRSELSLIFW*LLATTSPCNFL Trigger: TAAAAAGTTGCATGGTGATGTCGTTGCAAGCAGTCACCAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR GCA 72 bp | TCAAAGACCAGGCCAGAACTCAAACTAGAGGGCTTCTaGACTAAACTTGCAGTATTTGATCTAACATTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKTRPELKLEGF*TKLAVFDLTFS Trigger: ACTGAATGTTAGATCAAATACTGCAAGTTTAGTGCAGAAGCCCTCTAGTTTGAGTTCTGGCCTGGTCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCTGTCATAACTTGAGAGGATaGGATCAGTCCAGGAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AVFDLTFSFSKSSFCLLCHNLRG*DQSRSQ Trigger: TTGACTCCTGGACTGATCCAATCCTCTCAAGTTATG...ACAGAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGGATGACGCCTGCACAGTCATTCAAGAACACACCCCAGCCCGTGTGTAACGATGGGAGCTCCAGCTaGAGGACTTGCCGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LGMTPAQSFKNTPQPVCNDGSSS*RTCRST Trigger: AGTACTGCGGCAAGTCCTTCAGCTGGAGCTCCCATC...GTTACACACGGGCTGGGGTGTGTTCTTGAATGACTGTGCAGGCGTCATCCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCGTGGCTCAGAAGTCTGTGCTTTCCTaGGGCATGATGTCCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRSEDSDGEMRWEVVAQKSVLS*GMMSSD Trigger: GTCACTGGACATCATGCCTCAGGAAAGCACAGACTT...CTGAGCCACGACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
||
| CDS-3UTR GCA 90 bp | GTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCGTGGCTCAGGAAGATTGTCTGCTTTaGGGTGGCTCCTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSRSEDSDGEMRWEVVAQEDCLL*GGSFCS Trigger: GGAACAGAAGGAGCCACCGCAAAGCAGACAATCTTC...CTGAGCCACGACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| 3UTR CAA 72 bp | TCCAGGATCACGGTTTTCTCTGGGGTTCTCTGGGCATaGTTCCACATGCTCTGTCCCTCCTCTGTAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRITVFSGVLWA*FHMLCPSSVRS Trigger: GGACCTTACAGAGGAGGGACAGAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
||
| CDS-3UTR CCA 90 bp | AACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGGGCTTCTCCCACAGGTCCCTGTaGCCTTCCAGGATCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NREAVLSKTRPELKLEGFSHRSL*PSRITV Trigger: AACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGA...GAAGCCCTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 |
||
| CDS-3UTR CCA 90 bp | GAGGATTGGATCAGTCCAGGAGTCAACATCAGCTCTGACTCTCAACTGGTCAGGTGTTCCATGTACAGCTaGCAAGTCTCCACACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EDWISPGVNISSDSQLVRCSMYS*QVSTQA Trigger: GGCCTGTGTGGAGACTTGCCAGCTGTACATGGAACA...CCTGACCAGTTGAGAGTCAGAGCTGATGTTGACTCCTGGACTGATCCAATCCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207002.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGGGACGTAGCTCTGACTaGAGGATTTCCCGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCNREAVLSKTRPELKLEGRSSD*RISRTA Trigger: AGCAGTGCGGGAAATCCTTCAGTCAGAGCTACGTCC...CTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
||
| CDS-3UTR CCA 90 bp | GACCTCTTATCCACATCTGCCAAACTGAAGGCTTTACTCCTTTCTTTCGTCGACTCCCACAGGTCCCTGTaGCCTTCCAGGATCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLLSTSAKLKALLLSFVDSHRSL*PSRITV Trigger: AACCGTGATCCTGGAAGGCCACAGGGACCTGTGGGA...GTCGACGAAAGAAAGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 |
||
| 3UTR CAA 72 bp | GTTTTAGCATGGGCTTACCTCCATGCTGGTCCAAGCTaGACCCTGCTTGTGGATTTCCTGAAACAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLAWAYLHAGPS*TLLVDFLKQAA Trigger: AGCTGCCTGTTTCAGGAAATCCACAAGCAGGGTCAAGCTTGGACCAGCATGGAGGTAAGCCCATGCTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCAGTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCATCTTCAAGGAGATCTaGGCTATCACTGATCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPAVSRSEDSDGEMRWEVIFKEI*AITDLL Trigger: CAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGAT...GACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCACTGCAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
||
| CDS-3UTR GCA 90 bp | TTCGGTTGTTTCCCCGACTGCTCCTTACAGTCTCGGACTTCTTCACATGTTGACGAAGATTGTCTGCTTTaGGGTGGCTCCTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGCFPDCSLQSRTSSHVDEDCLL*GGSFCS Trigger: GGAACAGAAGGAGCCACCGCAAAGCAGACAATCTTC...GTCAACATGTGAAGAAGTCCGAGACTGTAAGGAGCAGTCGGGGAAACAACCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGATGCTCTGAGGAACTaGCCCAGCTGTGTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALQQRSCALKDQARTQTRDALRN*PSCVIF Trigger: GAAGATGACACAGCTGGGGCAGTTCCTCAGAGCATC...TCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
||
| CDS-3UTR TCA 90 bp | AACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAGAGGGCTTCGACTTCTTCACATGTTaGCAGCCAAGGGTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NREAVLSKTRPELKLEGFDFFTC*QPRVIS Trigger: AGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTC...GAAGCCCTCTAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
||
| CDS-3UTR TCA 90 bp | GCCTTCTCTGTACGAAGTGCTTTGGGAAACAACTTCTGCCAGTCAGGAAGTGGCTCACTGATCTTTTGGTaGCTGCTTGCAACGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFSVRSALGNNFCQSGSGSLIFW*LLATTS Trigger: TGATGTCGTTGCAAGCAGTCACCAAAAGATCAGTGA...GCCACTTCCTGACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
||
| CDS-3UTR CCA 90 bp | AATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCTGTTCCATGTACAGCTaGCAAGTCCCACAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLQSVSFATEKLCSQRPGCSMYS*QVPQVP Trigger: AGGGACCTGTGGGACTTGCCAGCTGTACATGGAACA...GCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 |
||
| 3UTR CAA 72 bp | CTAAGTCTAGCTTCTGCCTTCTCTGTACGAAGTGCTTaGGGAAACAACTTCTGCCAGTCAGGAAGTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLASAFSVRSA*GNNFCQSGSGL Trigger: AAGGCCACTTCCTGACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAGGCAGAAGCTAGACTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCTGCCTTCTCTGTACGAAGTGCTTTGGGAAACAACTTCTGCCAGTCAGGGATCTGAGCTATCACTaGTCTTTTGGTGACTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFCLLCTKCFGKQLLPVRDLSYH*SFGDCL Trigger: CAAGCAGTCACCAAAAGATCAGTGATAGCTCAGATC...CCTGACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAGGCAGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR TCA 90 bp | CCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGAACTTTCTCATTTAGAGTCTGTGCTGAGGCATaGTGTCCAGTGACCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: PRPLKPKVLPSKGTFSFRVCAEA*CPVTQH Trigger: ATGCTGGGTCACTGGACATCATGCCTCAGCACAGAC...TCTAAATGAGAAAGTTCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203854.3 |
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| CDS-3UTR CCA 90 bp | GACCTCTTATCCACATCTGCCAAACTGAAGGCTTTACTCCTTTCTTTCGTCGACTTCTCTGGGGTTCTCTaGGCATTGTTCCACATGCTC | + |
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Preference number: 4 (lower is better) Translates to: DLLSTSAKLKALLLSFVDFSGVL*ALFHML Trigger: GAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAA...GTCGACGAAAGAAAGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 |
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| CDS-3UTR CCA 90 bp | TGGTTTAAAACTTGCCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGATTCTCTGGGGTTCTCTaGGCATTGTTCCACATGCTC | + |
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Preference number: 4 (lower is better) Translates to: WFKTCPRPLKPKVLPSKGFSGVL*ALFHML Trigger: GAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAA...TCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203854.3 |
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| 3UTR CAA 72 bp | GTCACTTCCTGCCAAATGCATTCCTTCCCACATAACTaGAGAGGATTGGATCAGTCCAGGAGTCAACATCAG | + |
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Preference number: 4 (lower is better) Translates to: VTSCQMHSFPHN*RGLDQSRSQHQ Trigger: CTGATGTTGACTCCTGGACTGATCCAATCCTCTCAAGTTATGTGGGAAGGAATGCATTTGGCAGGAAGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| CDS-3UTR GCA 90 bp | CTTGCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCGAAGATTGTCTGCTTTaGGGTGGCTCCTTCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LAVFDLTFSFSKSSFCLLEDCLL*GGSFCS Trigger: GGAACAGAAGGAGCCACCGCAAAGCAGACAATCTTC...GAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 ENSMUST00000207002.2 |
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| CDS-3UTR CCA 90 bp | TTTCTTCTCCGGAGACCTCTTATCCACATCTGCCAAACTGAAGGCTTTACTCCTCTTCAATCCATGGGATaGTTCTTCATTGAAGATTGT | + |
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Preference number: 4 (lower is better) Translates to: FLLRRPLIHICQTEGFTPLQSMG*FFIEDC Trigger: ACAATCTTCAATGAAGAACCATCCCATGGATTGAAG...AGGAGTAAAGCCTTCAGTTTGGCAGATGTGGATAAGAGGTCTCCGGAGAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CCA 90 bp | CTAAATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGCCTGTTTATGGAAATaGTTTCTGAGGGGTATCATG | + |
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Preference number: 4 (lower is better) Translates to: LNLQSVSFATEKLCSQRPACLWK*FLRGIM Trigger: CATGATACCCCTCAGAAACCATTTCCATAAACAGGC...TGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR TCA 90 bp | CTTGCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCCCACAGTTACAATCTTaGAGTCTGTGCTTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LAVFDLTFSFSKSSFCLLPQLQS*SLCFPE Trigger: CTCAGGAAAGCACAGACTTCAAGATTGTAACTGTGG...GAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CCA 90 bp | CTTGCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCTGTGACGCCTGTTTATaGAAATGGTTTCTGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LAVFDLTFSFSKSSFCLLCDACL*KWFLRG Trigger: ACCCCTCAGAAACCATTTCCATAAACAGGCGTCACA...GAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CCA 90 bp | CTTGCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCACAAGAACATATCTCTaGGTAAAGGACTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: LAVFDLTFSFSKSSFCLLTRTYL*VKDFPH Trigger: GTGTGGGAAGTCCTTTACCCAGAGATATGTTCTTGT...GAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CCA 90 bp | CTTGCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTAGCTTCTGCCTTCTCTCTAGCTTCAATCCATaGGATGGTTCTTCATTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LAVFDLTFSFSKSSFCLLSSFNP*DGSSLK Trigger: CTTCAATGAAGAACCATCCCATGGATTGAAGCTAGA...GAGAAGGCAGAAGCTAGACTTAGAAAAACTGAATGTTAGATCAAATACTGCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR GCA 90 bp | CTGATAAACTTTTATTCCTTGTACCATGTTATAGCACAACATGCATCTCTGAGAGCAACGACATCACCATaGAACTTTTTAACATGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LINFYSLYHVIAQHASLRATTSP*NFLTCD Trigger: GTCACATGTTAAAAAGTTGCATGGTGATGTCGTTGC...TCTCAGAGATGCATGTTGTGCTATAACATGGTACAAGGAATAAAAGTTTATCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS CCA 90 bp | CTAGGACCTACTGGCTTCCAGCTTATCAGGGGAAATGCTAGCCTTTaGTGTGTGATAGACTCTTCCTCCACACAGGCCTGCAGGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: LGPTGFQLIRGNASL*CVIDSSSTQACRDS Trigger: GGAGTCCCTGCAGGCCTGTGTGGAGGAAGAGTCTATCACACACCAAAGGCTAGCATTTCCCCTGATAAGCTGGAAGCCAGTAGGTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| CDS-3UTR CAA 90 bp | TTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGGGGGTTCTCTGGGCATaGTTCCACATGCTCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: LQSVSFATEKLCSQRPGQGVLWA*FHMLCP Trigger: GGGACAGAGCATGTGGAACAATGCCCAGAGAACCCC...CTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 |
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| CDS-3UTR CAA 90 bp | CTGCCTGCAGTGAGTAGGTCTGAAGACTCTGATGGGGAGATGAGGTGGGAGGTCTGGGATGGTTCTTCATaGAAGATTGTCTGCTTTGCG | + |
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Preference number: 5 (lower is better) Translates to: LPAVSRSEDSDGEMRWEVWDGSS*KIVCFA Trigger: CGCAAAGCAGACAATCTTCAATGAAGAACCATCCCA...GACCTCCCACCTCATCTCCCCATCAGAGTCTTCAGACCTACTCACTGCAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000207002.2 |
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| CDS-3UTR CAA 90 bp | AATTTACAGAGTGTCAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCGCCAAGGGTCATCTCTaGCCGACCCCTCTAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: NLQSVSFATEKLCSQRPGAKGHL*PTPLAS Trigger: TGAAGCTAGAGGGGTCGGCAAGAGATGACCCTTGGC...GCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTGACACTCTGTAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CAA 90 bp | ATGAAGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTCTCTTGCTTGTTCGGTaGTTTCCCCGACTGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: MKEKSQRQDSKADGQQLLLLLVR*FPRLLL Trigger: AAGGAGCAGTCGGGGAAACAACCGAACAAGCAAGAG...AAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CAA 90 bp | GCCTTCTCTGTACGAAGTGCTTTGGGAAACAACTTCTGCCAGTCAGGAAGTGGCCTCCAGCTGAAGGACTaGCCGCAGTACTTACATTCA | + |
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Preference number: 5 (lower is better) Translates to: AFSVRSALGNNFCQSGSGLQLKD*PQYLHS Trigger: TGAATGTAAGTACTGCGGCAAGTCCTTCAGCTGGAG...GCCACTTCCTGACTGGCAGAAGTTGTTTCCCAAAGCACTTCGTACAGAGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CAA 90 bp | ATGCATTCCTTCCCACATAACTTGAGAGGATTGGATCAGTCCAGGAGTCAACATGGGGTTCTCTGGGCATaGTTCCACATGCTCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: MHSFPHNLRGLDQSRSQHGVLWA*FHMLCP Trigger: GGGACAGAGCATGTGGAACAATGCCCAGAGAACCCC...ATGTTGACTCCTGGACTGATCCAATCCTCTCAAGTTATGTGGGAAGGAATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 |
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| CDS-3UTR CAA 90 bp | CAGCTTTGCAACAGAGAAGCTGTGCTCTCAAAGACCAGGCCAGAACTCAAACTAAAAGGCCACCTCCTCTaGCTTGTTCGGTTGTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: QLCNREAVLSKTRPELKLKGHLL*LVRLFP Trigger: GGGAAACAACCGAACAAGCAAGAGGAGGTGGCCTTT...TAGTTTGAGTTCTGGCCTGGTCTTTGAGAGCACAGCTTCTCTGTTGCAAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS TCA 90 bp | TCCACAGTTACAATCTTGAAGTCTGTGCTGAGGCATGATGTCCAGTaGCCCAGCATCTTCTCCCTCCACTTCAATGATCATCTCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: STVTILKSVLRHDVQ*PSIFSLHFNDHLLG Trigger: CCCCAAGAGATGATCATTGAAGTGGAGGGAGAAGATGCTGGGTCACTGGACATCATGCCTCAGCACAGACTTCAAGATTGTAACTGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203854.3 |
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| CDS-3UTR CAA 90 bp | AGGAAAAGAGCCAGAGGCAGGACAGCAAAGCTGATGGCCAGCAGTTACTTTCCTTGGGATGGTTCTTCATaGAAGATTGTCTGCTTTGCG | + |
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Preference number: 5 (lower is better) Translates to: RKRARGRTAKLMASSYFPWDGSS*KIVCFA Trigger: CGCAAAGCAGACAATCTTCAATGAAGAACCATCCCA...AGGAAAGTAACTGCTGGCCATCAGCTTTGCTGTCCTGCCTCTGGCTCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000207002.2 |
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| CDS TCA 90 bp | AGTTACAATCTTGAAGTCTGTGCTTTCCTGAGGCATGATGTCCAGTaGCCCAGCATCTTCTCCCTCCACTTCAATGATCATCTCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SYNLEVCAFLRHDVQ*PSIFSLHFNDHLLG Trigger: CCCCAAGAGATGATCATTGAAGTGGAGGGAGAAGATGCTGGGTCACTGGACATCATGCCTCAGGAAAGCACAGACTTCAAGATTGTAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS-3UTR CAA 90 bp | TGGTTTAAAACTTGCCCGCGCCCTTTAAAGCCAAAGGTTTTACCTTCCAAAGGATCCACAGTTACAATCTaGAAGTCTGTGCTGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: WFKTCPRPLKPKVLPSKGSTVTI*KSVLRH Trigger: ATGCCTCAGCACAGACTTCAAGATTGTAACTGTGGA...TCCTTTGGAAGGTAAAACCTTTGGCTTTAAAGGGCGCGGGCAAGTTTTAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203854.3 |
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| CDS-3UTR CAA 90 bp | GGCTTCTGCACTAAACTTGCAGTATTTGATCTAACATTCAGTTTTTCTAAGTCTACCTCGGCCAGAAGCTaGAACATGGCCATTAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GFCTKLAVFDLTFSFSKSTSARS*NMAIKF Trigger: GAACTTAATGGCCATGTTCAAGCTTCTGGCCGAGGT...AGACTTAGAAAAACTGAATGTTAGATCAAATACTGCAAGTTTAGTGCAGAAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068975.6 |
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| CDS CCA 72 bp | CTGCTTTGCGGTGGCTCCTTCTGTTCCATGTACAGCTaGCAAGTCTCCACACAGGCCTGCAGGGACTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLCGGSFCSMYS*QVSTQACRDSR Trigger: CCTGGAGTCCCTGCAGGCCTGTGTGGAGACTTGCCAGCTGTACATGGAACAGAAGGAGCCACCGCAAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207002.2 |
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| CDS GCA 72 bp | TGTTCCATGTACAGCTGGCAAGTCTCCACACAGGCCTaGAGGGACTCCAGGGACTCATCATCTTGTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSMYSWQVSTQA*RDSRDSSSCCS Trigger: GGAGCAACAAGATGATGAGTCCCTGGAGTCCCTGCAGGCCTGTGTGGAGACTTGCCAGCTGTACATGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207002.2 |
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| CDS GCA 72 bp | CTTTGGTGTGTGATAGACTCTTCCTCCACACAGGCCTaGAGGGACTCCAGGGACTCATCATCTTGTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LWCVIDSSSTQA*RDSRDSSSCCS Trigger: GGAGCAACAAGATGATGAGTCCCTGGAGTCCCTGCAGGCCTGTGTGGAGGAAGAGTCTATCACACACCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| CDS GCA 72 bp | ATCTCTTGGGGTAGAACAAAGTTCTCCACACAGGCCTaGAGGGACTCCAGGGACTCATCATCTTGTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISWGRTKFSTQA*RDSRDSSSCCS Trigger: GGAGCAACAAGATGATGAGTCCCTGGAGTCCCTGCAGGCCTGTGTGGAGAACTTTGTTCTACCCCAAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068975.6 ENSMUST00000203854.3 |
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| CDS CCA 72 bp | ACTGGCTTCCAGCTTATCAGGGGAAATGCTAGCCTTTaGTGTGTGATAGACTCTTCCTCCACACAGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TGFQLIRGNASL*CVIDSSSTQAC Trigger: GCAGGCCTGTGTGGAGGAAGAGTCTATCACACACCAAAGGCTAGCATTTCCCCTGATAAGCTGGAAGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206184.2 |
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| CDS TCA 72 bp | GTCCACAGTTACAATCTTGAAGTCTGTGCTGAGGCATaGTGTCCAGTGACCCAGCATCTTCTCCCTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: VHSYNLEVCAEA*CPVTQHLLPPL Trigger: AAGTGGAGGGAGAAGATGCTGGGTCACTGGACATCATGCCTCAGCACAGACTTCAAGATTGTAACTGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203854.3 |
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