Pregenerated sensors for ZFP174 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054939Ensembl transcript IDs: ENSMUST00000041778.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCTTCTGTGCCATTGGACCCTCATGCCATCCGTTGTTGGGAGGTaGGCCTCATACAAAGGAAAACTGGGCTGGGGACAAGCAGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: SLLCHWTLMPSVVGR*ASYKGKLGWGQAGK Trigger: CTTGCCTGCTTGTCCCCAGCCCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCACAGAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | TCATGCCATCCGTTGTTGGGAGGTGAGCCTCATACAAAGGAAAACTaGGCTGGGGACAAGCAGGCAAGGCAGCAGCATGGCCTTGACACT | + |
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Preference number: 1 (lower is better) Translates to: SCHPLLGGEPHTKEN*AGDKQARQQHGLDT Trigger: AGTGTCAAGGCCATGCTGCTGCCTTGCCTGCTTGTCCCCAGCCCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | ACCCAAGAGCCTTCTGTGCCATTGGACCCTCATGCCATCCGTTGTTaGGAGGTGAGCCTCATACAAAGGAAAACTGGGCTGGGGACAAGC | + |
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Preference number: 1 (lower is better) Translates to: TQEPSVPLDPHAIRC*EVSLIQRKTGLGTS Trigger: GCTTGTCCCCAGCCCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCACAGAAGGCTCTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | TTAGTTATAGCAGGGTTTGGGGTCACATACCTTTTTACCAGCACTTaGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LVIAGFGVTYLFTST*EAEAGGFLSSRPAW Trigger: CCAGGCTGGCCTGGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGTAAAAAGGTATGTGACCCCAAACCCTGCTATAACTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 90 bp | GGAGCAGTCTTGCACTGTGAGGAGTCACTGCCAGTCTTACTGGAGTaGCAGTTGTACTGTGGGATTGATTGGCACCTTACCTGCTGGATA | + |
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Preference number: 1 (lower is better) Translates to: GAVLHCEESLPVLLE*QLYCGIDWHLTCWI Trigger: TATCCAGCAGGTAAGGTGCCAATCAATCCCACAGTACAACTGTCACTCCAGTAAGACTGGCAGTGACTCCTCACAGTGCAAGACTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 90 bp | GAGATAGTTATGGTGGCTCACATTTGTAAACCCAGGACTCAAGGCTaGGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGA | + |
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Preference number: 1 (lower is better) Translates to: EIVMVAHICKPRTQG*GKKTAVSPASLSYR Trigger: TCTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTCCTGGGTTTACAAATGTGAGCCACCATAACTATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR GCA 90 bp | ACCCAGAAATATGGCAGAGCCAATGGGATGGGTAGGAGCCAGAGCTaGATGATAGGTTATTTTCTTAGGTTGGGGTCCAGGAAAGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: TQKYGRANGMGRSQS*MIGYFLRLGSRKGK Trigger: CTTCCCTTTCCTGGACCCCAACCTAAGAAAATAACCTATCATGCAGCTCTGGCTCCTACCCATCCCATTGGCTCTGCCATATTTCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | AACAGGCAGAATTCCCCTGTCCACCAGAGCAGTACTTACTTCTCTTaGGAGCTTTCCCTTATATCGTGGGCTGGAGGTGGAACACCTTTT | + |
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Preference number: 1 (lower is better) Translates to: NRQNSPVHQSSTYFS*ELSLISWAGGGTPF Trigger: AAAAGGTGTTCCACCTCCAGCCCACGATATAAGGGAAAGCTCCCAAGAGAAGTAAGTACTGCTCTGGTGGACAGGGGAATTCTGCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | TTTGAGGAGCAGTCTTGCACTGTGAGGAGTCACTGCCAGTCTTACTaGAGTGACAGTTGTACTGTGGGATTGATTGGCACCTTACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: FEEQSCTVRSHCQSY*SDSCTVGLIGTLPA Trigger: AGCAGGTAAGGTGCCAATCAATCCCACAGTACAACTGTCACTCCAGTAAGACTGGCAGTGACTCCTCACAGTGCAAGACTGCTCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR GCA 90 bp | GACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGAGCAAAGACTCCTaGTGGAAAACAACAGAGAGCAAAAGATTTGACAAACAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: DCCKPSQPKLQSKDS*WKTTESKRFDKQAG Trigger: TCCTGCCTGTTTGTCAAATCTTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | TGCTGTAAGCCCAGCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTaGAAAACAACAGAGAGCAAAAGATTTGACAAACAGGCAGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: CCKPSQPKLQSKDSC*KTTESKRFDKQAGA Trigger: TGCTCCTGCCTGTTTGTCAAATCTTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGCTGGGCTTACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 90 bp | TCAGGCCCCATCAGCCTCTTTCTGACCTCCTTACAAGTTGATTATTaGCCCATCACTTCCCAAAGGCCACTTGCTCTGTTTGTAAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SGPISLFLTSLQVDY*PITSQRPLALFVSH Trigger: GTGACTTACAAACAGAGCAAGTGGCCTTTGGGAAGTGATGGGTCAATAATCAACTTGTAAGGAGGTCAGAAAGAGGCTGATGGGGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 90 bp | AAACTGGCAAGTGTAAAGTGTAGTGTAAGCACGTTGGAGACAGTTTaGTCAGCAGGATTATCACATGGCCTAGCAGGGAGCTTTGCTCGG | + |
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Preference number: 1 (lower is better) Translates to: KLASVKCSVSTLETV*SAGLSHGLAGSFAR Trigger: CCGAGCAAAGCTCCCTGCTAGGCCATGTGATAATCCTGCTGATCAAACTGTCTCCAACGTGCTTACACTACACTTTACACTTGCCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 90 bp | CTTATAGTCAGGCCCCATCAGCCTCTTTCTGACCTCCTTACAAGTTaGTTATTGACCCATCACTTCCCAAAGGCCACTTGCTCTGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: LIVRPHQPLSDLLTS*LLTHHFPKATCSVC Trigger: ACAAACAGAGCAAGTGGCCTTTGGGAAGTGATGGGTCAATAATCAACTTGTAAGGAGGTCAGAAAGAGGCTGATGGGGCCTGACTATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 90 bp | CATGGCCTAGCAGGGAGCTTTGCTCGGCCCCTAGGCATGTACCCATaGGAAGTGAAACATAAAAACCTGGATATAACGTTAGAACAACAT | + |
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Preference number: 1 (lower is better) Translates to: HGLAGSFARPLGMYP*EVKHKNLDITLEQH Trigger: ATGTTGTTCTAACGTTATATCCAGGTTTTTATGTTTCACTTCTCATGGGTACATGCCTAGGGGCCGAGCAAAGCTCCCTGCTAGGCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | GCCGAAATGGAGGAAGAGGGTGCCTTCCCTAGGGTGATTACTGATTaGGCTCTACTTTCTACTTTAAGAAAACAAGAGTTTGGCATGGGA | + |
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Preference number: 1 (lower is better) Translates to: AEMEEEGAFPRVITD*ALLSTLRKQEFGMG Trigger: TCCCATGCCAAACTCTTGTTTTCTTAAAGTAGAAAGTAGAGCCCAATCAGTAATCACCCTAGGGAAGGCACCCTCTTCCTCCATTTCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | ATGACTGGCACAGGGAAGTCTGTGGGTGATGTGACCCAACAGGCTTaGAGGAATGATAGAAATTGTGCTCCAAGGGTCCTTAATTTCATT | + |
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Preference number: 1 (lower is better) Translates to: MTGTGKSVGDVTQQA*RNDRNCAPRVLNFI Trigger: AATGAAATTAAGGACCCTTGGAGCACAATTTCTATCATTCCTCCAAGCCTGTTGGGTCACATCACCCACAGACTTCCCTGTGCCAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | CACCAGAGCAGTACTTACTTCTCTTGGGAGCTTTCCCTTATATCGTaGGCTGGAGGTGGAACACCTTTTGTAAATCAAAAGTGCTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: HQSSTYFSWELSLIS*AGGGTPFVNQKCFD Trigger: GTCAAAGCACTTTTGATTTACAAAAGGTGTTCCACCTCCAGCCCACGATATAAGGGAAAGCTCCCAAGAGAAGTAAGTACTGCTCTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | AGATGTGGAGATTATCCTGCTATACCCAATATAAGCATCCAAGAATaGAGTGGGCTGCTAGAAGCTGAAAAAGTCAAGGAAACCAATTTA | + |
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Preference number: 1 (lower is better) Translates to: RCGDYPAIPNISIQE*SGLLEAEKVKETNL Trigger: TAAATTGGTTTCCTTGACTTTTTCAGCTTCTAGCAGCCCACTCCATTCTTGGATGCTTATATTGGGTATAGCAGGATAATCTCCACATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | TGGCAAAATGAACATTTTGTAAGTATTACTGAAGATCTTGAGATGTaGAGATTATCCTGCTATACCCAATATAAGCATCCAAGAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: WQNEHFVSITEDLEM*RLSCYTQYKHPRME Trigger: CTCCATTCTTGGATGCTTATATTGGGTATAGCAGGATAATCTCCACATCTCAAGATCTTCAGTAATACTTACAAAATGTTCATTTTGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 90 bp | GTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTACTTTACACTaGCAATTTAGAAACAGAGAATTTGGTTCCTTGTATTTTGACAAG | + |
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Preference number: 1 (lower is better) Translates to: VLNFIKSQGCQATLH*QFRNREFGSLYFDK Trigger: CTTGTCAAAATACAAGGAACCAAATTCTCTGTTTCTAAATTGCCAGTGTAAAGTAGCCTGACATCCCTGTGATTTAATGAAATTAAGGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CAA 90 bp | CAGTACCCAAGAGCCTTCTGTGCCATTGGACCCTCATGCCATCCGTaGTTGGGAGGTGAGCCTCATACAAAGGAAAACTGGGCTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: QYPRAFCAIGPSCHP*LGGEPHTKENWAGD Trigger: GTCCCCAGCCCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCACAGAAGGCTCTTGGGTACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CAA 90 bp | TACCCAAGAGCCTTCTGTGCCATTGGACCCTCATGCCATCCGTTGTaGGGAGGTGAGCCTCATACAAAGGAAAACTGGGCTGGGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: YPRAFCAIGPSCHPL*GGEPHTKENWAGDK Trigger: CTTGTCCCCAGCCCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCACAGAAGGCTCTTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGCGGGGAATCAAACACTaGAAGCAGGAGTCACCCCTA | + |
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Preference number: 2 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQRGIKH*KQESPL Trigger: TAGGGGTGACTCCTGCTTTCAGTGTTTGATTCCCCG...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | GGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTGAGTTCCAGCACTGCTTCACTCTGCCGAGACTaGAGCTCTCTGTGCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GFLSSRPAWSTELSSSTASLCRD*SSLCSK Trigger: CTTGGAGCACAGAGAGCTGCAGTCTCGGCAGAGTGA...AGCAGTGCTGGAACTCAACTCTGTAGACCAGGCTGGCCTGGAACTCAGAAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGTGTTTCCCTTCTCCTTaGGTCTCCCTGGGGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQCFPSP*VSLGLT Trigger: AGTTAGCCCCAGGGAGACCCAAGGAGAAGGGAAACA...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CAA 90 bp | GGGATGGGTAGGAGCCAGAGCTGCATGATAGGTTATTTTCTTAGGTaGGGGTCCAGGAAAGGGAAGCTGGCCGCAAGGAAAGTAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GMGRSQSCMIGYFLR*GSRKGKLAARKVGR Trigger: CCTACCTACTTTCCTTGCGGCCAGCTTCCCTTTCCTGGACCCCAACCTAAGAAAATAACCTATCATGCAGCTCTGGCTCCTACCCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGTGTAACCTTGATACTTaGGAGGTGGAGGCAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQCNLDT*EVEAGR Trigger: CCTTCCTGCCTCCACCTCCCAAGTATCAAGGTTACA...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CAA 90 bp | TTTAGTTATAGCAGGGTTTGGGGTCACATACCTTTTTACCAGCACTaGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: FSYSRVWGHIPFYQH*GGRGRWISEFQASL Trigger: CAGGCTGGCCTGGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGTAAAAAGGTATGTGACCCCAAACCCTGCTATAACTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CAA 90 bp | GAACAGGCAGAATTCCCCTGTCCACCAGAGCAGTACTTACTTCTCTaGGGAGCTTTCCCTTATATCGTGGGCTGGAGGTGGAACACCTTT | + |
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Preference number: 2 (lower is better) Translates to: EQAEFPCPPEQYLLL*GAFPYIVGWRWNTF Trigger: AAAGGTGTTCCACCTCCAGCCCACGATATAAGGGAAAGCTCCCAAGAGAAGTAAGTACTGCTCTGGTGGACAGGGGAATTCTGCCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAACCCAAGAGCCTTCTGTaGCATTGGACCCTCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKPKSLL*HWTLMP Trigger: TGGCATGAGGGTCCAATGGCACAGAAGGCTCTTGGG...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGCATAAATTAAAGGTTTaGACAGGTGCCCAAAGACGC | + |
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Preference number: 2 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQHKLKV*TGAQRR Trigger: GCGTCTTTGGGCACCTGTTCAAACCTTTAATTTATG...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAAAAGGAAAACTGGGCTaGGGACAAGCAGGCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKKGKLG*GQAGKA Trigger: TGCCTTGCCTGCTTGTCCCCAGCCCAGTTTTCCTTT...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGAGGCACAGCTCTAAATaGTGTATGGTAAACACTGAA | + |
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Preference number: 2 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQRHSSK*CMVNTE Trigger: TTCAGTGTTTACCATACAGCATTTAGAGCTGTGCCT...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTACAGTGGTGTGTGGGCTaGGGAAGAGGTAAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: EIVLQGSLISLNHRDVRLQWCVG*GRGKAQ Trigger: CTGGGCCTTACCTCTTCCCCAGCCCACACACCACTG...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGCTGTTTTCATTACAGATATGTACCGCTGGGCACGCGTGTACATCTGTCAAGCCTTCTGTGCCATTaGACCCTCATGCCATCCGTT | + |
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Preference number: 2 (lower is better) Translates to: NSCFHYRYVPLGTRVHLSSLLCH*TLMPSV Trigger: AACGGATGGCATGAGGGTCCAATGGCACAGAAGGCT...TGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAACCAGTCTTACTGGAGTaGCAGTTGTACTGTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKPVLLE*QLYCGI Trigger: AATCCCACAGTACAACTGTCACTCCAGTAAGACTGG...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCGCAGAGCCAATGGGATaGGTAGGAGCCAGAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PCILTSNSCFHYRYVPLGAEPMG*VGARAA Trigger: TGCAGCTCTGGCTCCTACCCATCCCATTGGCTCTGC...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTAAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGCCTGGTCTACAGAGTTaGGTTCCAGCACTGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SFKANGLFKNRQNSPVHQPGLQS*VPALLG Trigger: CCCTAGCAGTGCTGGAACTCAACTCTGTAGACCAGG...CTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTTAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAGAAAACTGTACATGGTaGCACATGCCTGTAACCTTG | + |
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Preference number: 2 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKENCTW*HMPVTL Trigger: CAAGGTTACAGGCATGTGTCACCATGTACAGTTTTC...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CAA 90 bp | TACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAGATTaGACAAACAGGCAGGAGCAGTATTTCAAACTCATGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: YRAKTPAGKQQRAKD*TNRQEQYFKLMASL Trigger: CAGGCTGGCCATGAGTTTGAAATACTGCTCCTGCCTGTTTGTCAAATCTTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGCTGTTTTCATTACAGATATGTACCGCTGGGCACGCGTGTACATCTGTCAGGACTCTCCGGTGAATaGTTTCTTTGCATTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: NSCFHYRYVPLGTRVHLSGLSGE*FLCILI Trigger: GATGAGAATGCAAAGAAAGCATTCACCGGAGAGTCC...TGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGCTGTTTTCATTACAGATATGTACCGCTGGGCACGCGTGTACATCTGTCAACGTTGGAGACAGTTTaGTCAGCAGGATTATCACAT | + |
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Preference number: 2 (lower is better) Translates to: NSCFHYRYVPLGTRVHLSTLETV*SAGLSH Trigger: ATGTGATAATCCTGCTGATCAAACTGTCTCCAACGT...TGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAGGTGAATGCTTTCTTTaGATTCTCATCAACTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKGECFL*ILINCS Trigger: TGAGCAGTTGATGAGAATGCAAAGAAAGCATTCACC...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACCAAAACTCTAGCCATTaGCCCCGTGCCAACCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: PELCWRLYQPSLQKQNNYQNSSH*PRANPY Trigger: GTAAGGGTTGGCACGGGGGCAATGGCTAGAGTTTTG...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTACTTACTTAGAAACTTTTAATCAGACACACACACACACACACACACACCTTTTTACCAGCACTTaGGAGGCAGAGGCAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSTYLETFNQTHTHTHTHLFTST*EAEAGG Trigger: TCCACCTGCCTCTGCCTCCCAAGTGCTGGTAAAAAG...GTGTGTGTGTGTGTGTGTGTGTGTCTGATTAAAAGTTTCTAAGTAAGTAGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACTTGATACTTGGGAGGTaGAGGCAGGAAGGTCACGGT | + |
|
Preference number: 2 (lower is better) Translates to: PELCWRLYQPSLQKQNNYLILGR*RQEGHG Trigger: ACCGTGACCTTCCTGCCTCCACCTCCCAAGTATCAA...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCCAGAGCAAAGACTCCTaGTGGAAAACAACAGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PCILTSNSCFHYRYVPLGQSKDS*WKTTES Trigger: GCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTG...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTAACCCCTATATCTGAATaGAGTACCCAAGAGCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EIVLQGSLISLNHRDVRLTPISE*STQEPS Trigger: AGAAGGCTCTTGGGTACTGCATTCAGATATAGGGGT...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGAAGTTCCAGGCCAGCCTaGTCTACAGAGTTGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRSSRPA*STELSS Trigger: GGAACTCAACTCTGTAGACCAGGCTGGCCTGGAACT...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCTGTTTTCATTACAGATATGTACCGCTGGGCACGCGTGTACATCTGTCAAGGGTGATTACTGATTaGGCTCTACTTTCTACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: NSCFHYRYVPLGTRVHLSRVITD*ALLSTL Trigger: TAAAGTAGAAAGTAGAGCCCAATCAGTAATCACCCT...TGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCATGCCTTCAGAAGAATaGCCACCACATCCTACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: PCILTSNSCFHYRYVPLGMPSEE*PPHPTY Trigger: GTAAGTAGGATGTGGTGGCCATTCTTCTGAAGGCAT...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACCCATCAGCCTCTTTCTaGCCTCCTTACAAGTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: PELCWRLYQPSLQKQNNYPSASF*PPYKLI Trigger: AATCAACTTGTAAGGAGGTCAGAAAGAGGCTGATGG...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACGTTATTTTCTTAGGTTaGGGTCCAGGAAAGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PELCWRLYQPSLQKQNNYVIFLG*GPGKGS Trigger: GCTTCCCTTTCCTGGACCCCAACCTAAGAAAATAAC...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTATTACAAGTTGATTATTaGCCCATCACTTCCCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: EIVLQGSLISLNHRDVRLLQVDY*PITSQR Trigger: CCTTTGGGAAGTGATGGGTCAATAATCAACTTGTAA...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTACTTACTTAGAAACTTTTAATCAGACACACACACACACACACACACACGACCTCCTTACAAGTTaGTTATTGACCCATCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSTYLETFNQTHTHTHTHDLLTS*LLTHHF Trigger: GAAGTGATGGGTCAATAATCAACTTGTAAGGAGGTC...GTGTGTGTGTGTGTGTGTGTGTGTCTGATTAAAAGTTTCTAAGTAAGTAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGATCCGTTGTTGGGAGGTaGGCCTCATACAAAGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRSVVGR*ASYKGK Trigger: TTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGA...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACGGAAACATTTTAGTTTaGGGAGCAGTCTTGCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: PELCWRLYQPSLQKQNNYGNILV*GAVLHC Trigger: ACAGTGCAAGACTGCTCCTCAAACTAAAATGTTTCC...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCAGTACTTACTTCTCTTaGGAGCTTTCCCTTATATCG | + |
|
Preference number: 2 (lower is better) Translates to: PCILTSNSCFHYRYVPLGSTYFS*ELSLIS Trigger: CGATATAAGGGAAAGCTCCCAAGAGAAGTAAGTACT...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACCTGTATGGTAAACACTaGACCGTATACTATAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PELCWRLYQPSLQKQNNYLYGKH*TVYYKC Trigger: GCACTTATAGTATACGGTTCAGTGTTTACCATACAG...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGACTACTTACACATATCTaGCGAAATGGAGGAAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRLLTHI*RNGGRG Trigger: CCCTCTTCCTCCATTTCGGCAGATATGTGTAAGTAG...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGAGACACAGTGCACACCTaGTGTGCACAGAAGATATTT | + |
|
Preference number: 2 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRDTVHT*CAQKIF Trigger: AAATATCTTCTGTGCACACCAGGTGTGCACTGTGTC...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CAA 90 bp | AGGGATGTCAGGCTACTTTACACTGGCAATTTAGAAACAGAGAATTaGGTTCCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RDVRLLYTGNLETEN*VPCILTSNSCFHYR Trigger: TCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGGAACCAAATTCTCTGTTTCTAAATTGCCAGTGTAAAGTAGCCTGACATCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAATCTGAAACAAGACAGTAATTATGTTAAAGGTGTGCAGAAACTGGCAAGTCTAGGCATGTACCCATaGGAAGTGAAACATAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QNLKQDSNYVKGVQKLASLGMYP*EVKHKN Trigger: GTTTTTATGTTTCACTTCTCATGGGTACATGCCTAG...ACTTGCCAGTTTCTGCACACCTTTAACATAATTACTGTCTTGTTTCAGATTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR GCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGATGCATTCTCATCAACTaGTCAAGTGTACACATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRCILIN*SSVHMK Trigger: TTTCATGTGTACACTTGAGCAGTTGATGAGAATGCA...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGATCACAAAAGATACTTTaGGATTTACAGGCAAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRSQKIL*DLQASK Trigger: CTTACTTGCCTGTAAATCGCAAAGTATCTTTTGTGA...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | CCGTTGTTGGGAGGTGAGCCTCATACAAAGGAAAACTaGGCTGGGGACAAGCAGGCAAGGCAGCAGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLLGGEPHTKEN*AGDKQARQQHG Trigger: GCCATGCTGCTGCCTTGCCTGCTTGTCCCCAGCCCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 72 bp | TGCCATTGGACCCTCATGCCATCCGTTGTTGGGAGGTaGGCCTCATACAAAGGAAAACTGGGCTGGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: CHWTLMPSVVGR*ASYKGKLGWGQ Trigger: TTGTCCCCAGCCCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR GCA 72 bp | CAGTACCCAAGAGCCTTCTGTGCCATTGGACCCTCATaGCATCCGTTGTTGGGAGGTGAGCCTCATACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QYPRAFCAIGPS*HPLLGGEPHTK Trigger: CTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCACAGAAGGCTCTTGGGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR CCA 72 bp | GCAGGGTTTGGGGTCACATACCTTTTTACCAGCACTTaGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGFGVTYLFTST*EAEAGGFLSSR Trigger: CCTGGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGTAAAAAGGTATGTGACCCCAAACCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | CTGTACATGGTGACACATGCCTGTAACCTTGATACTTaGGAGGTGGAGGCAGGAAGGTCACGGTCAGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LYMVTHACNLDT*EVEAGRSRSAR Trigger: CCTAGCTGACCGTGACCTTCCTGCCTCCACCTCCCAAGTATCAAGGTTACAGGCATGTGTCACCATGTACAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR TCA 72 bp | GGTAGGTCAAGACTGTGCGGAGGCTCTGGGGAAGCATaGATGGATGAAGGAGATGAGGGAACCCCTATATCT | + |
|
Preference number: 3 (lower is better) Translates to: GRSRLCGGSGEA*MDEGDEGTPIS Trigger: AGATATAGGGGTTCCCTCATCTCCTTCATCCATTCATGCTTCCCCAGAGCCTCCGCACAGTCTTGACCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAGCCTGGTCTACAGAGTaGAGTTCCAGCACTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKAWSTE*SSSTAR Trigger: CCTAGCAGTGCTGGAACTCAACTCTGTAGACCAGGC...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CAA 90 bp | AACAGCTGTTTTCATTACAGATATGTACCGCTGGGCACGCGTGTACATCTGTCACCTTTTTACCAGCACTaGGGAGGCAGAGGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NSCFHYRYVPLGTRVHLSPFYQH*GGRGRW Trigger: CCACCTGCCTCTGCCTCCCAAGTGCTGGTAAAAAGG...TGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAATGTTTCCCTTCTCCTaGGGTCTCCCTGGGGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKMFPFS*GLPGAN Trigger: GTTAGCCCCAGGGAGACCCAAGGAGAAGGGAAACAT...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR GCA 72 bp | TATGGCAGAGCCAATGGGATGGGTAGGAGCCAGAGCTaGATGATAGGTTATTTTCTTAGGTTGGGGTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YGRANGMGRSQS*MIGYFLRLGSR Trigger: CCTGGACCCCAACCTAAGAAAATAACCTATCATGCAGCTCTGGCTCCTACCCATCCCATTGGCTCTGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | AATTCCCCTGTCCACCAGAGCAGTACTTACTTCTCTTaGGAGCTTTCCCTTATATCGTGGGCTGGAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NSPVHQSSTYFS*ELSLISWAGGG Trigger: TCCACCTCCAGCCCACGATATAAGGGAAAGCTCCCAAGAGAAGTAAGTACTGCTCTGGTGGACAGGGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | GGTCAAGACTGTGCGGAGGCTCTGGGGAAGCATGAATaGATGAAGGAGATGAGGGAACCCCTATATCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GQDCAEALGKHE*MKEMREPLYLN Trigger: ATTCAGATATAGGGGTTCCCTCATCTCCTTCATCCATTCATGCTTCCCCAGAGCCTCCGCACAGTCTTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | CAGTCTTGCACTGTGAGGAGTCACTGCCAGTCTTACTaGAGTGACAGTTGTACTGTGGGATTGATTGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: QSCTVRSHCQSY*SDSCTVGLIGT Trigger: GGTGCCAATCAATCCCACAGTACAACTGTCACTCCAGTAAGACTGGCAGTGACTCCTCACAGTGCAAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR TCA 72 bp | AGGCCCCATCAGCCTCTTTCTGACCTCCTTACAAGTTaGTTATTGACCCATCACTTCCCAAAGGCCACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RPHQPLSDLLTS*LLTHHFPKATC Trigger: GCAAGTGGCCTTTGGGAAGTGATGGGTCAATAATCAACTTGTAAGGAGGTCAGAAAGAGGCTGATGGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR TCA 72 bp | TTGCACTGTGAGGAGTCACTGCCAGTCTTACTGGAGTaGCAGTTGTACTGTGGGATTGATTGGCACCTTACC | + |
|
Preference number: 3 (lower is better) Translates to: LHCEESLPVLLE*QLYCGIDWHLT Trigger: GGTAAGGTGCCAATCAATCCCACAGTACAACTGTCACTCCAGTAAGACTGGCAGTGACTCCTCACAGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR GCA 72 bp | ATGGATGAAGGAGATGAGGGAACCCCTATATCTGAATaGAGTACCCAAGAGCCTTCTGTGCCATTGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: MDEGDEGTPISE*STQEPSVPLDP Trigger: AGGGTCCAATGGCACAGAAGGCTCTTGGGTACTGCATTCAGATATAGGGGTTCCCTCATCTCCTTCATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | ACAGGGAAGTCTGTGGGTGATGTGACCCAACAGGCTTaGAGGAATGATAGAAATTGTGCTCCAAGGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TGKSVGDVTQQA*RNDRNCAPRVL Trigger: AAGGACCCTTGGAGCACAATTTCTATCATTCCTCCAAGCCTGTTGGGTCACATCACCCACAGACTTCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR GCA 72 bp | ACATCTGTCATCCCATCCTGGTTAGGACAGGAGGATTaGAAGTTTGAGGCTAGCCTGAGTTATGCTGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TSVIPSWLGQED*KFEASLSYAGD Trigger: ATCTCCAGCATAACTCAGGCTAGCCTCAAACTTGCAATCCTCCTGTCCTAACCAGGATGGGATGACAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR TCA 72 bp | CGGAAACATTTTAGTTTGAGGAGCAGTCTTGCACTGTaGGGAGTCACTGCCAGTCTTACTGGAGTGACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RKHFSLRSSLAL*GVTASLTGVTV Trigger: AACTGTCACTCCAGTAAGACTGGCAGTGACTCCTCACAGTGCAAGACTGCTCCTCAAACTAAAATGTTTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR TCA 72 bp | GCAGGGAGCTTTGCTCGGCCCCTAGGCATGTACCCATaGGAAGTGAAACATAAAAACCTGGATATAACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: AGSFARPLGMYP*EVKHKNLDITL Trigger: TAACGTTATATCCAGGTTTTTATGTTTCACTTCTCATGGGTACATGCCTAGGGGCCGAGCAAAGCTCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR TCA 72 bp | AGTGTAAAGTGTAGTGTAAGCACGTTGGAGACAGTTTaGTCAGCAGGATTATCACATGGCCTAGCAGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVKCSVSTLETV*SAGLSHGLAGS Trigger: GCTCCCTGCTAGGCCATGTGATAATCCTGCTGATCAAACTGTCTCCAACGTGCTTACACTACACTTTACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR GCA 72 bp | ACCAATTTACCTCTCAGAGTCTCCAATGGGAAACCCTaGTCAAGGAGATTATGGCTGAGGCTGATTTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TNLPLRVSNGKP*SRRLWLRLISD Trigger: GTCTGAAATCAGCCTCAGCCATAATCTCCTTGAGCAGGGTTTCCCATTGGAGACTCTGAGAGGTAAATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | AGTCAAGGAAACCAATTTACCTCTCAGAGTCTCCAATaGGAAACCCTGCTCAAGGAGATTATGGCTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SQGNQFTSQSLQ*ETLLKEIMAEA Trigger: AGCCTCAGCCATAATCTCCTTGAGCAGGGTTTCCCATTGGAGACTCTGAGAGGTAAATTGGTTTCCTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | CCCAGCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTaGAAAACAACAGAGAGCAAAAGATTTGACAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: PSQPKLQSKDSC*KTTESKRFDKQ Trigger: CTGTTTGTCAAATCTTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | CAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTaGGCACGCGTGTACATCTGTCATCCCATCCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QVTAVFITDMYR*ARVYICHPILV Trigger: AACCAGGATGGGATGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTGTTTTCATTACAGATATGTACCGCTGGGCACGCGTGTACATCTGTCAGAGTTATGCTGGAGATaGTATCAACCCTCACTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NSCFHYRYVPLGTRVHLSELCWR*YQPSLQ Trigger: TTGCAGTGAGGGTTGATACAATCTCCAGCATAACTC...TGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR GCA 72 bp | AAGCCCAGCCAGCCTAAGCTACAGAGCAAAGACTCCTaGTGGAAAACAACAGAGAGCAAAAGATTTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: KPSQPKLQSKDS*WKTTESKRFDK Trigger: TTTGTCAAATCTTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGCTGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR TCA 72 bp | ATCAGCCTCTTTCTGACCTCCTTACAAGTTGATTATTaGCCCATCACTTCCCAAAGGCCACTTGCTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ISLFLTSLQVDY*PITSQRPLALF Trigger: AAACAGAGCAAGTGGCCTTTGGGAAGTGATGGGTCAATAATCAACTTGTAAGGAGGTCAGAAAGAGGCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR TCA 72 bp | AGCTTTCCTTATAGTCAGGCCCCATCAGCCTCTTTCTaGCCTCCTTACAAGTTGATTATTGACCCATCACTT | + |
|
Preference number: 3 (lower is better) Translates to: SFPYSQAPSASF*PPYKLIIDPSL Trigger: AAGTGATGGGTCAATAATCAACTTGTAAGGAGGTCAGAAAGAGGCTGATGGGGCCTGACTATAAGGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | CTTCTCTGTGACACTGACAGTATCTTAAAACAAGACTaGAGTGACAGAGGCACAGCTCTAAATGCTGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLCDTDSILKQD*SDRGTALNAVW Trigger: CCATACAGCATTTAGAGCTGTGCCTCTGTCACTCCAGTCTTGTTTTAAGATACTGTCAGTGTCACAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTAGGTTATTTTCTTAGGTaGGGGTCCAGGAAAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EIVLQGSLISLNHRDVRLGYFLR*GSRKGK Trigger: CTTCCCTTTCCTGGACCCCAACCTAAGAAAATAACC...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | TTACTTCTCTTGGGAGCTTTCCCTTATATCGTGGGCTaGAGGTGGAACACCTTTTGTAAATCAAAAGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLLGAFPYIVG*RWNTFCKSKVL Trigger: AAGCACTTTTGATTTACAAAAGGTGTTCCACCTCCAGCCCACGATATAAGGGAAAGCTCCCAAGAGAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | TTGGGCTCTACTTTCTACTTTAAGAAAACAAGAGTTTaGCATGGGAAGGTTCCTAGACCCACTTCTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LGSTFYFKKTRV*HGKVPRPTSGT Trigger: AGTTCCAGAAGTGGGTCTAGGAACCTTCCCATGCCAAACTCTTGTTTTCTTAAAGTAGAAAGTAGAGCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | GAGGAAGAGGGTGCCTTCCCTAGGGTGATTACTGATTaGGCTCTACTTTCTACTTTAAGAAAACAAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: EEEGAFPRVITD*ALLSTLRKQEF Trigger: AAACTCTTGTTTTCTTAAAGTAGAAAGTAGAGCCCAATCAGTAATCACCCTAGGGAAGGCACCCTCTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACAGTTGTACTGTGGGATaGATTGGCACCTTACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PELCWRLYQPSLQKQNNYSCTVG*IGTLPA Trigger: AGCAGGTAAGGTGCCAATCAATCCCACAGTACAACT...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR GCA 72 bp | AAGACTCTTAGAGGACTCTCCGGTGAATGCTTTCTTTaGATTCTCATCAACTGCTCAAGTGTACACATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTLRGLSGECFL*ILINCSSVHMK Trigger: TTTCATGTGTACACTTGAGCAGTTGATGAGAATGCAAAGAAAGCATTCACCGGAGAGTCCTCTAAGAGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | GATTATCCTGCTATACCCAATATAAGCATCCAAGAATaGAGTGGGCTGCTAGAAGCTGAAAAAGTCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DYPAIPNISIQE*SGLLEAEKVKE Trigger: TTCCTTGACTTTTTCAGCTTCTAGCAGCCCACTCCATTCTTGGATGCTTATATTGGGTATAGCAGGATAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATCTGAAACAAGACAGTAATTATGTTAAAGGTGTGCAGAAACTGGCAAGTGGCAGCAGCATGGCCTaGACACTGTTTGGAAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QNLKQDSNYVKGVQKLASGSSMA*TLFGKE Trigger: TTCTTTTCCAAACAGTGTCAAGGCCATGCTGCTGCC...ACTTGCCAGTTTCTGCACACCTTTAACATAATTACTGTCTTGTTTCAGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATCTGAAACAAGACAGTAATTATGTTAAAGGTGTGCAGAAACTGGCAAGTCGGAAACATTTTAGTTaGAGGAGCAGTCTTGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: QNLKQDSNYVKGVQKLASRKHFS*RSSLAL Trigger: CAGTGCAAGACTGCTCCTCAAACTAAAATGTTTCCG...ACTTGCCAGTTTCTGCACACCTTTAACATAATTACTGTCTTGTTTCAGATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACACACATTCTCAATTaGTCTTTAGTTATAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PELCWRLYQPSLQKQNNYTHILN*SLVIAG Trigger: CCCTGCTATAACTAAAGACAAATTGAGAATGTGTGT...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | TTCATTAAATCACAGGGATGTCAGGCTACTTTACACTaGCAATTTAGAAACAGAGAATTTGGTTCCTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FIKSQGCQATLH*QFRNREFGSLY Trigger: ATACAAGGAACCAAATTCTCTGTTTCTAAATTGCCAGTGTAAAGTAGCCTGACATCCCTGTGATTTAATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CCA 72 bp | GAACATTTTGTAAGTATTACTGAAGATCTTGAGATGTaGAGATTATCCTGCTATACCCAATATAAGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: EHFVSITEDLEM*RLSCYTQYKHP Trigger: TGGATGCTTATATTGGGTATAGCAGGATAATCTCCACATCTCAAGATCTTCAGTAATACTTACAAAATGTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGCTTGGCTGGGTGGGCTaGCTGGTGACCAAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQLGWVG*LVTKTL Trigger: CAGTGTCTTGGTCACCAGGCAGCCCACCCAGCCAAG...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | GGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTGAGTTCCAGCACTGCTGCTGCAGCCACTGTCTaGAGAGCTGTTGAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFLSSRPAWSTELSSSTAAAATV*RAVEGR Trigger: CCTGCCTTCAACAGCTCTGCAGACAGTGGCTGCAGC...AGCAGTGCTGGAACTCAACTCTGTAGACCAGGCTGGCCTGGAACTCAGAAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | GGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTGAGTTCCAGCACTGCTTCCAGAGAGTCCTCCTaGATGTCTCTGCTGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLSSRPAWSTELSSSTASRESS*MSLLGV Trigger: AACTCCCAGCAGAGACATTCAGGAGGACTCTCTGGA...AGCAGTGCTGGAACTCAACTCTGTAGACCAGGCTGGCCTGGAACTCAGAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | GGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTGAGTTCCAGCACTGCTTGCCTTTGCTCCTCTTaGCTCCTCCTGTTTCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLSSRPAWSTELSSSTACLCSS*LLLFRV Trigger: AACCCGAAACAGGAGGAGGCAAGAGGAGCAAAGGCA...AGCAGTGCTGGAACTCAACTCTGTAGACCAGGCTGGCCTGGAACTCAGAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | AGCAGGGTTTGGGGTCACATACCTTTTTACCAGCACTaGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRVWGHIPFYQH*GGRGRWISEFQ Trigger: CTGGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGTAAAAAGGTATGTGACCCCAAACCCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | GAATTCCCCTGTCCACCAGAGCAGTACTTACTTCTCTaGGGAGCTTTCCCTTATATCGTGGGCTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFPCPPEQYLLL*GAFPYIVGWRW Trigger: CCACCTCCAGCCCACGATATAAGGGAAAGCTCCCAAGAGAAGTAAGTACTGCTCTGGTGGACAGGGGAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | AGAGCCTTCTGTGCCATTGGACCCTCATGCCATCCGTaGTTGGGAGGTGAGCCTCATACAAAGGAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAFCAIGPSCHP*LGGEPHTKENW Trigger: CCAGTTTTCCTTTGTATGAGGCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCACAGAAGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | ATATCTGAATGCAGTACCCAAGAGCCTTCTGTGCCATaGGACCCTCATGCCATCCGTTGTTGGGAGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISECSTQEPSVP*DPHAIRCWEVS Trigger: GCTCACCTCCCAACAACGGATGGCATGAGGGTCCAATGGCACAGAAGGCTCTTGGGTACTGCATTCAGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTTAAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGGGGTGGGCTGCCTGGTaGCCAAGACACTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFKANGLFKNRQNSPVHQGWAAW*PRHCRR Trigger: CCTCCTGCAGTGTCTTGGTCACCAGGCAGCCCACCC...CTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTTAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGTCCAAGAGCACCTTTTaGCCTTGCATACAAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQSKSTF*PCIQTV Trigger: GACTGTTTGTATGCAAGGGCAAAAGGTGCTCTTGGA...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | GGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTGAGTTCCAGCACTGCTGTGTGGATTCTCTGGTaGAGTTTCAGAGTTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFLSSRPAWSTELSSSTAVWILW*SFRVDC Trigger: GCAGTCAACTCTGAAACTGCACCAGAGAATCCACAC...AGCAGTGCTGGAACTCAACTCTGTAGACCAGGCTGGCCTGGAACTCAGAAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTAGAGGACTCTCCGGTGAATGCTTTCTTTGCATTCTCATCAACTGCTCATGCAGTCACCCCTCTTaGCTCAGGGCTGTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRGLSGECFLCILINCSCSHPS*LRAVQG Trigger: ACCCTGCACAGCCCTGAGCCAAGAGGGGTGACTGCA...TGAGCAGTTGATGAGAATGCAAAGAAAGCATTCACCGGAGAGTCCTCTAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | AGGAGCCAGAGCTGCATGATAGGTTATTTTCTTAGGTaGGGGTCCAGGAAAGGGAAGCTGGCCGCAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSQSCMIGYFLR*GSRKGKLAARK Trigger: TTTCCTTGCGGCCAGCTTCCCTTTCCTGGACCCCAACCTAAGAAAATAACCTATCATGCAGCTCTGGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | GGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTGAGTTCCAGCACTGCTGCTCTGAATTCCACGTaGAGTTTTTCCCACAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLSSRPAWSTELSSSTAALNST*SFSHNL Trigger: AAGATTGTGGGAAAAACTTCACGTGGAATTCAGAGC...AGCAGTGCTGGAACTCAACTCTGTAGACCAGGCTGGCCTGGAACTCAGAAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTAGGTCTCTCCCCGGTGTaGACTCTCCTGTGTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIVLQGSLISLNHRDVRLGLSPV*TLLCRF Trigger: GAAGCGACACAGGAGAGTGCACACCGGGGAGAGACC...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTAGAGGACTCTCCGGTGAATGCTTTCTTTGCATTCTCATCAACTGCTCATGCCAGACCTGTGCCTaGATCTCTGGAGGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLRGLSGECFLCILINCSCQTCA*ISGGRM Trigger: CATCCTACCTCCAGAGATCCAGGCACAGGTCTGGCA...TGAGCAGTTGATGAGAATGCAAAGAAAGCATTCACCGGAGAGTCCTCTAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTATGTCTGCAGAGCTGTTaGAGGCAGGAGAGCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EIVLQGSLISLNHRDVRLCLQSC*RQESAS Trigger: GGAAGCGCTCTCCTGCCTTCAACAGCTCTGCAGACA...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCCTGGTAGTGGGCAAGTaGCTTGGGAGATTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PCILTSNSCFHYRYVPLGLVVGK*LGRLWG Trigger: CCCCCACAATCTCCCAAGTCACTTGCCCACTACCAG...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCTGGTGGAGCCTGTGGTaGTGGTGGAGGTTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCILTSNSCFHYRYVPLGWWSLW*WWRLEL Trigger: AAGCTCCAACCTCCACCAGCACCACAGGCTCCACCA...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCAACTCTCTCAGCGGGTaGCCTCTGAGGGGATTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PCILTSNSCFHYRYVPLGNSLSG*PLRGLL Trigger: CAGTAATCCCCTCAGAGGTCACCCGCTGAGAGAGTT...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCGACTGTGCATGCCTTTaGTCCTCTTGCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCILTSNSCFHYRYVPLGDCACL*SSCLLL Trigger: CAGGAGGAGGCAAGAGGAGCAAAGGCATGCACAGTC...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAGAGGACTCTCCGGTGAATGCTTTCTTTGCATTCTCATCAACTGCTCATTTGGCGAAAGCATTTaGCACAGTGGCTGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRGLSGECFLCILINCSFGESI*HSGCTG Trigger: ACCAGTGCAGCCACTGTGGCAAATGCTTTCGCCAAA...TGAGCAGTTGATGAGAATGCAAAGAAAGCATTCACCGGAGAGTCCTCTAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCAGCTGTAAGGTTTCTTaGCTGGGTGGGCTGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCILTSNSCFHYRYVPLGSCKVS*LGGLPG Trigger: ACCAGGCAGCCCACCCAGCCAAGAAACCTTACAGCT...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | TGCCAGTCTTACTGGAGTGACAGTTGTACTGTGGGATaGATTGGCACCTTACCTGCTGGATATGAAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQSYWSDSCTVG*IGTLPAGYEKG Trigger: CCCTTTTTCATATCCAGCAGGTAAGGTGCCAATCAATCCCACAGTACAACTGTCACTCCAGTAAGACTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTACTGTCTCAGTCAATCTaGGGACTGGTTCCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIVLQGSLISLNHRDVRLLSQSI*GLVPGG Trigger: TCCTCCAGGAACCAGTCCTCAGATTGACTGAGACAG...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCAGGATGACCAGAAACTaGTCCATCACCAGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCILTSNSCFHYRYVPLGRMTRN*SITRSS Trigger: GGAGCTCCTGGTGATGGAGCAGTTTCTGGTCATCCT...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | ATTGATGCCTTCAGAAGAATGGCCACCACATCCTACTTACACATATCTGCCGAAAGCACCTTTTGCCCTTaGATACAAACAGTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IDAFRRMATTSYLHISAESTFCP*IQTVTH Trigger: GTGGGTGACTGTTTGTATGCAAGGGCAAAAGGTGCT...TTCGGCAGATATGTGTAAGTAGGATGTGGTGGCCATTCTTCTGAAGGCATCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | ATTGATGCCTTCAGAAGAATGGCCACCACATCCTACTTACACATATCTGCCGAAAGTCAATCTGAGGACTaGTTCCTGGAGGACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDAFRRMATTSYLHISAESQSED*FLEDSL Trigger: AAGACTGTCCTCCAGGAACCAGTCCTCAGATTGACT...TTCGGCAGATATGTGTAAGTAGGATGTGGTGGCCATTCTTCTGAAGGCATCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | AAGGCCCAGCTGAATATTGAAGATAAAGGCAGTGACTaGGCATTGATGCCTTCAGAAGAATGGCCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KAQLNIEDKGSD*ALMPSEEWPPH Trigger: ATGTGGTGGCCATTCTTCTGAAGGCATCAATGCCAAGTCACTGCCTTTATCTTCAATATTCAGCTGGGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTTAAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGCCTCCTGAATGTCTCTaGTGGGAGTTTGGGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFKANGLFKNRQNSPVHQPPECL*WEFGVE Trigger: TTCAACCCCAAACTCCCAGCAGAGACATTCAGGAGG...CTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAGAGGACTCTCCGGTGAATGCTTTCTTTGCATTCTCATCAACTGCTCATTCCATGTAAGACTGTaGATGCCTTTGCTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRGLSGECFLCILINCSFHVRL*MPLLLL Trigger: CAAGAGGAGCAAAGGCATGCACAGTCTTACATGGAA...TGAGCAGTTGATGAGAATGCAAAGAAAGCATTCACCGGAGAGTCCTCTAAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGAGTAAGGTTTCTTGGCTaGGTGGGCTGCCTGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRVRFLG*VGCLVT Trigger: GGTCACCAGGCAGCCCACCCAGCCAAGAAACCTTAC...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | CAGCTGAATATTGAAGATAAAGGCAGTGACTTGGCATaGATGCCTTCAGAAGAATGGCCACCACATCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QLNIEDKGSDLA*MPSEEWPPHPT Trigger: AGTAGGATGTGGTGGCCATTCTTCTGAAGGCATCAATGCCAAGTCACTGCCTTTATCTTCAATATTCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGTATTTTGACAAGTAACAGCTGTTTTCATTACAGATATGTACCGCTGGGCGAGTCACAATCTCCCTaGTGCTCTTTGGATACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCILTSNSCFHYRYVPLGESQSP*CSLDTD Trigger: ATCGGTATCCAAAGAGCAGCAGGGAGATTGTGACTC...GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATACAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGAAAGTGTCTGAAGCCCTaGCGGGAAAGCTCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRKCLKP*RESSGS Trigger: TGACCCTGAGCTTTCCCGCCAGGGCTTCAGACACTT...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| 3UTR CAA 72 bp | GACACACACACACACACACACACACACATTCTCAATTaGTCTTTAGTTATAGCAGGGTTTGGGGTCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: DTHTHTHTHILN*SLVIAGFGVTY Trigger: GTATGTGACCCCAAACCCTGCTATAACTAAAGACAAATTGAGAATGTGTGTGTGTGTGTGTGTGTGTGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTGTGCTCCAAGGGTCCTTAATTTCATTAAATCACAGGGATGTCAGGCTAGTGTCGCTTCAGCTCTaGATTCCACGTGAAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EIVLQGSLISLNHRDVRLVSLQL*IPREVF Trigger: AAAAACTTCACGTGGAATTCAGAGCTGAAGCGACAC...TAGCCTGACATCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGTTTGGCATGGGAAGGTTCCTAGACCCACTTCTGGAACTCTTAACATTTAGGAGCTCCAAAATCTaGTCTTTAGTGTGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEFGMGRFLDPLLELLTFRSSKI*SLVCSS Trigger: TGAACTACACACTAAAGAGCAGATTTTGGAGCTCCT...AAATGTTAAGAGTTCCAGAAGTGGGTCTAGGAACCTTCCCATGCCAAACTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTAAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGTCAGAATCCTCAGTGTaGGTGCTCAAAGTTATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFKANGLFKNRQNSPVHQSESSV*VLKVIS Trigger: GGAGATAACTTTGAGCACCCACACTGAGGATTCTGA...CTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTTAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATCTGAAACAAGACAGTAATTATGTTAAAGGTGTGCAGAAACTGGCAAGTGGTGCTGGTGGAGGTTaGAGCTTTGGCGAAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QNLKQDSNYVKGVQKLASGAGGG*SFGESI Trigger: AATGCTTTCGCCAAAGCTCCAACCTCCACCAGCACC...ACTTGCCAGTTTCTGCACACCTTTAACATAATTACTGTCTTGTTTCAGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGAGTGCAGTTTCAGAGTTaGCTGCCTCCCAAAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRVQFQS*LPPKAV Trigger: AACTGCTTTGGGAGGCAGTCAACTCTGAAACTGCAC...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACATTCTCAATTTGTCTTTAGTTATAGCAGGGTTTGGGAATCCTCAGTGTGGGTaGTCAAAGTTATCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHILNLSLVIAGFGNPQCG*SKLSPF Trigger: GAATGGAGATAACTTTGAGCACCCACACTGAGGATT...CCCAAACCCTGCTATAACTAAAGACAAATTGAGAATGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTTAAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGATTATGTGTCTCTCTTaGTTGTCAGAATCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFKANGLFKNRQNSPVHQIMCLS*LSESSV Trigger: CACTGAGGATTCTGACAAGCAAGAGAGACACATAAT...CTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTTAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR TCA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGATCTTGTTCTACAAGCTaGGCTCCTGTTTTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRSCSTS*APVFSK Trigger: CTTGGAGAAAACAGGAGCTCAGCTTGTAGAACAAGA...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGTTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACTTTTTGGATGTTCTGTaGAAATCTTCCACCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PELCWRLYQPSLQKQNNYFLDVL*KSSTRV Trigger: GACTCTGGTGGAAGATTTGCACAGAACATCCAAAAA...GTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATCTGAAACAAGACAGTAATTATGTTAAAGGTGTGCAGAAACTGGCAAGTTATATTCCAGCTCTCTaGAATGTTTCTGGTAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNLKQDSNYVKGVQKLASYIPAL*NVSGSG Trigger: CCCACTACCAGAAACATTGCAGAGAGCTGGAATATA...ACTTGCCAGTTTCTGCACACCTTTAACATAATTACTGTCTTGTTTCAGATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | GACTCAAGGCTGAGGCAAGAAGACTGCTGTAAGCCCAGCCAGCCTAAGCTACAGCTTTGGCGAAAGCATTaGCCACAGTGGCTGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSRLRQEDCCKPSQPKLQLWRKH*PQWLHW Trigger: CCAGTGCAGCCACTGTGGCAAATGCTTTCGCCAAAG...CTGTAGCTTAGGCTGGCTGGGCTTACAGCAGTCTTCTTGCCTCAGCCTTGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS TCA 90 bp | TTTCCTTGTCACCTCTCATTCTGGAGGACTCTGTCTCAGTCAATCTaGGGACTGGTTCCTGGAGGACAGTCTTCTCCCAGTGGTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FPCHLSFWRTLSQSI*GLVPGGQSSPSGED Trigger: GTCCTCACCACTGGGAGAAGACTGTCCTCCAGGAACCAGTCCTCAGATTGACTGAGACAGAGTCCTCCAGAATGAGAGGTGACAAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAACTGTCTGCAGAGCTGTaGAAGGCAGGAGAGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKLSAEL*KAGERF Trigger: GAAGCGCTCTCCTGCCTTCAACAGCTCTGCAGACAG...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGAGCAGTTTGCAGTCACCCCTCTaGGCTCAGGGCTGTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KANGLFKNRQNSPVHQSSLQSPL*AQGCAG Trigger: CCCTGCACAGCCCTGAGCCAAGAGGGGTGACTGCAA...ACTGCTCTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CCA 90 bp | CTTCGCAGGAAGGCTCTTCCAGAGAGTCCTCCTGAATGTCTCTGCTaGGAGTTTGGGGTTGAAAGTCTCGAAGTTCTTGTTCTACAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRRKALPESPPECLC*EFGVESLEVLVLQA Trigger: AGCTTGTAGAACAAGAACTTCGAGACTTTCAACCCCAAACTCCCAGCAGAGACATTCAGGAGGACTCTCTGGAAGAGCCTTCCTGCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGTTTGGCATGGGAAGGTTCCTAGACCCACTTCTGGAACTCTTAACATTTATGCCTTTGCTCCTCTaGCCTCCTCCTGTTTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QEFGMGRFLDPLLELLTFMPLLL*PPPVSG Trigger: ACCCGAAACAGGAGGAGGCAAGAGGAGCAAAGGCAT...AAATGTTAAGAGTTCCAGAAGTGGGTCTAGGAACCTTCCCATGCCAAACTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAATGTGTCTCTCTTGCTaGTCAGAATCCTCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKMCLSC*SESSVW Trigger: CCACACTGAGGATTCTGACAAGCAAGAGAGACACAT...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCCTAAGCTACAGAGCAAAGACTCCTGCTGGAAAACAACAGAGAGCAAAAGGGCCCAGACACTTCTaGATAGCAAAAGTGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASLSYRAKTPAGKQQRAKGPRHF*IAKVSE Trigger: TTCAGACACTTTTGCTATCAAGAAGTGTCTGGGCCC...TTTTGCTCTCTGTTGTTTTCCAGCAGGAGTCTTTGCTCTGTAGCTTAGGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | ATTGATGCCTTCAGAAGAATGGCCACCACATCCTACTTACACATATCTGCCGAAGGTGCAGTTTCAGAGTaGACTGCCTCCCAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IDAFRRMATTSYLHISAEGAVSE*TASQSS Trigger: ACTGCTTTGGGAGGCAGTCAACTCTGAAACTGCACC...TTCGGCAGATATGTGTAAGTAGGATGTGGTGGCCATTCTTCTGAAGGCATCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | ATTGATGCCTTCAGAAGAATGGCCACCACATCCTACTTACACATATCTGCCGAAGAGCACCTTTTGCCCTaGCATACAAACAGTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: IDAFRRMATTSYLHISAEEHLLP*HTNSHP Trigger: TGGGTGACTGTTTGTATGCAAGGGCAAAAGGTGCTC...TTCGGCAGATATGTGTAAGTAGGATGTGGTGGCCATTCTTCTGAAGGCATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTTAAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGTGGTGCTGGTGGAGGTaGGAGCTTTGGCGAAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFKANGLFKNRQNSPVHQWCWWR*ELWRKH Trigger: ATGCTTTCGCCAAAGCTCCAACCTCCACCAGCACCA...CTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTTAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | ATTGATGCCTTCAGAAGAATGGCCACCACATCCTACTTACACATATCTGCCGAAAAAGTCTCGAAGTTCTaGTTCTACAAGCTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IDAFRRMATTSYLHISAEKVSKF*FYKLSS Trigger: GGAGCTCAGCTTGTAGAACAAGAACTTCGAGACTTT...TTCGGCAGATATGTGTAAGTAGGATGTGGTGGCCATTCTTCTGAAGGCATCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTTAAAGCTAATGGCTTATTTAAGAACAGGCAGAATTCCCCTGTCCACCAGGCTGGGAGTTTGGGGTaGAAAGTCTCGAAGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFKANGLFKNRQNSPVHQAGSLG*KVSKFL Trigger: CAAGAACTTCGAGACTTTCAACCCCAAACTCCCAGC...CTGGTGGACAGGGGAATTCTGCCTGTTCTTAAATAAGCCATTAGCTTTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCTGTTTTCATTACAGATATGTACCGCTGGGCACGCGTGTACATCTGTCACACTGCTTTGGTTTTTaGGATGTTCTGTGCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NSCFHYRYVPLGTRVHLSHCFGF*DVLCKS Trigger: AGATTTGCACAGAACATCCAAAAAACCAAAGCAGTG...TGACAGATGTACACGCGTGCCCAGCGGTACATATCTGTAATGAAAACAGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACATTCTCAATTTGTCTTTAGTTATAGCAGGGTTTGGGCTCCAAGAGCACCTTTaGCCCTTGCATACAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHILNLSLVIAGFGLQEHL*PLHTNS Trigger: ACTGTTTGTATGCAAGGGCAAAAGGTGCTCTTGGAG...CCCAAACCCTGCTATAACTAAAGACAAATTGAGAATGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | TTATGCTGGAGATTGTATCAACCCTCACTGCAAAAACAAAACAATTACACAAGAAGACTGTGCATGCCTTaGCTCCTCTTGCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCWRLYQPSLQKQNNYTRRLCMP*LLLPPP Trigger: AGGAGGAGGCAAGAGGAGCAAAGGCATGCACAGTCT...TCTTGTGTAATTGTTTTGTTTTTGCAGTGAGGGTTGATACAATCTCCAGCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCTACTTACTTAGAAACTTTTAATCAGACACACACACACACACACACACACTATTATGTGTCTCTCTaGCTTGTCAGAATCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSTYLETFNQTHTHTHTHYYVSL*LVRILS Trigger: ACTGAGGATTCTGACAAGCAAGAGAGACACATAATA...GTGTGTGTGTGTGTGTGTGTGTGTCTGATTAAAAGTTTCTAAGTAAGTAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 90 bp | GAGCTGTTGAAGGCAGGAGAGCGCTTCCTGGGGCCCAGACACTTCTaGATAGCAAAAGTGTCTGAAGCCCTGGCGGGAAAGCTCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ELLKAGERFLGPRHF*IAKVSEALAGKLRV Trigger: GACCCTGAGCTTTCCCGCCAGGGCTTCAGACACTTTTGCTATCAAGAAGTGTCTGGGCCCCAGGAAGCGCTCTCCTGCCTTCAACAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS TCA 72 bp | GGTAGTGGGCAAGTGACTTGGGAGATTGTGGGGGTCTaGCCTGCCATTGCAACAATCGGGCATCACTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSGQVTWEIVGV*PAIATIGHHLQ Trigger: CTGCAAGTGATGCCCGATTGTTGCAATGGCAGGTCAGACCCCCACAATCTCCCAAGTCACTTGCCCACTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS GCA 72 bp | GCATCACTTGCAGTCACCCCTCTTGGCTCAGGGCTGTaGAGGGTACCCCCTTTAGGTCTTCCATGTAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: ASLAVTPLGSGL*RVPPLGLPCKT Trigger: AGTCTTACATGGAAGACCTAAAGGGGGTACCCTGCACAGCCCTGAGCCAAGAGGGGTGACTGCAAGTGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS GCA 72 bp | AGAGTCACAATCTCCCTGCTGCTCTTTGGATACCGATaGCAGACCTGTGCCTGGATCTCTGGAGGTAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RVTISLLLFGYR*QTCAWISGGRM Trigger: CATCCTACCTCCAGAGATCCAGGCACAGGTCTGGCATCGGTATCCAAAGAGCAGCAGGGAGATTGTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS TCA 72 bp | CACCTCTCATTCTGGAGGACTCTGTCTCAGTCAATCTaGGGACTGGTTCCTGGAGGACAGTCTTCTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HLSFWRTLSQSI*GLVPGGQSSPS Trigger: ACTGGGAGAAGACTGTCCTCCAGGAACCAGTCCTCAGATTGACTGAGACAGAGTCCTCCAGAATGAGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 90 bp | GTGCATGCCTTTGCTCCTCTTGCCTCCTCCTGTTTCGGGTTTTCCTaGTCACCTCTCATTCTGGAGGACTCTGTCTCAGTCAATCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VHAFAPLASSCFGFS*SPLILEDSVSVNLR Trigger: CCTCAGATTGACTGAGACAGAGTCCTCCAGAATGAGAGGTGACAAGGAAAACCCGAAACAGGAGGAGGCAAGAGGAGCAAAGGCATGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 90 bp | GGAAGGCTCTTCCAGAGAGTCCTCCTGAATGTCTCTGCTGGGAGTTaGGGGTTGAAAGTCTCGAAGTTCTTGTTCTACAAGCTGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRLFQRVLLNVSAGS*GLKVSKFLFYKLSS Trigger: GGAGCTCAGCTTGTAGAACAAGAACTTCGAGACTTTCAACCCCAAACTCCCAGCAGAGACATTCAGGAGGACTCTCTGGAAGAGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 72 bp | TTTGCTCCTCTTGCCTCCTCCTGTTTCGGGTTTTCCTaGTCACCTCTCATTCTGGAGGACTCTGTCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: FAPLASSCFGFS*SPLILEDSVSV Trigger: GACTGAGACAGAGTCCTCCAGAATGAGAGGTGACAAGGAAAACCCGAAACAGGAGGAGGCAAGAGGAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 72 bp | TACAAGCTGAGCTCCTGTTTTCTCCAAGAGCACCTTTaGCCCTTGCATACAAACAGTCACCCACTGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: YKLSSCFLQEHL*PLHTNSHPLLW Trigger: CCAAAGCAGTGGGTGACTGTTTGTATGCAAGGGCAAAAGGTGCTCTTGGAGAAAACAGGAGCTCAGCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 72 bp | TCTGCTGGGAGTTTGGGGTTGAAAGTCTCGAAGTTCTaGTTCTACAAGCTGAGCTCCTGTTTTCTCCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAGSLGLKVSKF*FYKLSSCFLQE Trigger: CTCTTGGAGAAAACAGGAGCTCAGCTTGTAGAACAAGAACTTCGAGACTTTCAACCCCAAACTCCCAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 90 bp | GGGCCACGGTTTTCTTCCAGCTTCATTATTATGTGTCTCTCTTGCTaGTCAGAATCCTCAGTGTGGGTGCTCAAAGTTATCTCCATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GPRFSSSFIIMCLSC*SESSVWVLKVISIL Trigger: TAGAATGGAGATAACTTTGAGCACCCACACTGAGGATTCTGACAAGCAAGAGAGACACATAATAATGAAGCTGGAAGAAAACCGTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS CAA 72 bp | CCTTGCATACAAACAGTCACCCACTGCTTTGGTTTTTaGGATGTTCTGTGCAAATCTTCCACCAGAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: PCIQTVTHCFGF*DVLCKSSTRVT Trigger: TGTGACTCTGGTGGAAGATTTGCACAGAACATCCAAAAAACCAAAGCAGTGGGTGACTGTTTGTATGCAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||
| CDS GCA 72 bp | CGGTTTTCTTCCAGCTTCATTATTATGTGTCTCTCTTaGTTGTCAGAATCCTCAGTGTGGGTGCTCAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RFSSSFIIMCLS*LSESSVWVLKV Trigger: AACTTTGAGCACCCACACTGAGGATTCTGACAAGCAAGAGAGACACATAATAATGAAGCTGGAAGAAAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041778.8 |
||