Pregenerated sensors for ZFP169 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050954Ensembl transcript IDs: ENSMUST00000110110.9, ENSMUST00000167682.8, ENSMUST00000176176.8, ENSMUST00000176996.8, ENSMUST00000177530.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCTGAAGCCATGCCCACAATGCCCGTTCTTAGGGCTTCTTGCCTaGGTAAGTCTGCTGATGTCTGATGAGGGCAGAGTTAAAGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: QLKPCPQCPFLGLLA*VSLLMSDEGRVKAN Trigger: GTTGGCTTTAACTCTGCCCTCATCAGACATCAGCAGACTTACTCAGGCAAGAAGCCCTAAGAACGGGCATTGTGGGCATGGCTTCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR TCA 90 bp | ATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTaGAACTGTTGTTCAGGGCTAGGAAAACAACACTGCCTGCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: MWFQTLVRSGARSNV*NCCSGLGKQHCLPV Trigger: GACTGGCAGGCAGTGTTGTTTTCCTAGCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CCA 90 bp | CCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGGGATaGACCTGTAGGTGCACAGCACATCGGGAAGCCATCCATCTGCTA | + |
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Preference number: 1 (lower is better) Translates to: PIQNSRHQEKYIQEG*TCRCTAHREAIHLL Trigger: TAGCAGATGGATGGCTTCCCGATGTGCTGTGCACCTACAGGTCCATCCCTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR TCA 90 bp | AACTGTTGTTCAGGGCTAGGAAAACAACACTGCCTGCCAGTCCTGTaGGCCAGGGGACAGAACACTGAGTCAATATTACTCTTGAGACTT | + |
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Preference number: 1 (lower is better) Translates to: NCCSGLGKQHCLPVL*ARGQNTESILLLRL Trigger: AAGTCTCAAGAGTAATATTGACTCAGTGTTCTGTCCCCTGGCTCACAGGACTGGCAGGCAGTGTTGTTTTCCTAGCCCTGAACAACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CCA 90 bp | CAACACCTGAGCCGGCCTGATAGAGGACTTCTAGGCTCATATATATaGCGAAGTAAACTTCTTTTGCCTGAGCTCTATGGTCTGGGGTAT | + |
|
Preference number: 1 (lower is better) Translates to: QHLSRPDRGLLGSYI*RSKLLLPELYGLGY Trigger: ATACCCCAGACCATAGAGCTCAGGCAAAAGAAGTTTACTTCGCCATATATATGAGCCTAGAAGTCCTCTATCAGGCCGGCTCAGGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CCA 90 bp | TTCCCTTTCGGAATAGGAATATCTAACCTGTATCTGTCTAGTCATTaGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTG | + |
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Preference number: 1 (lower is better) Translates to: FPFGIGISNLYLSSH*TLEASSMFNFIGLL Trigger: CAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACTAGACAGATACAGGTTAGATATTCCTATTCCGAAAGGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAAATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGTGCCTGCCAGTCCTGTaGGCCAGGGGACAGAACACT | + |
|
Preference number: 2 (lower is better) Translates to: KENVVPNPGQVWSEVKRVCLPVL*ARGQNT Trigger: AGTGTTCTGTCCCCTGGCTCACAGGACTGGCAGGCA...CACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACATTTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CAA 90 bp | CCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTaGTTCAGGGCTAGGAAAACAACACTGCCTGCCAGTCCTGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PNPGQVWSEVKRVKL*FRARKTTLPASPVS Trigger: GCTCACAGGACTGGCAGGCAGTGTTGTTTTCCTAGCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGGCGAGGTCAAACGTGTaGAACTGTTGTTCAGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SSKQFVVHLQEKGRALGLARSNV*NCCSGL Trigger: TAGCCCTGAACAACAGTTTCACACGTTTGACCTCGC...CAGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTCCTGGGACTCATCACTaGTCAGGTCTTTCTGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: ELQAVCCSSPGKGKSSRAPGTHH*SGLSDV Trigger: AACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGG...AGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CAA 90 bp | TTCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTCCAAGCAGTTTGTaGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGCTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: FRVSKEKTSRAPSSL*FISRKREELSGCSP Trigger: GGGTGAGCAGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTCTACTGGTCTTCTCTTTAGAAACTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAAAATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAGCTGACGCTGAAATaGGTTAAGGATGTAAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: KGKCGSKPWSGLERGQTCELTLK*VKDVRC Trigger: GCACCTTACATCCTTAACTCATTTCAGCGTCAGCTC...ACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACATTTTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | CTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGGGATGGACCTGTAGGCTTCTCTTTGGAGTaGACTGGGTCCTCTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LSRIRGTRKSIYRRDGPVGFSLE*TGSSSQ Trigger: CTGACTAGAGGACCCAGTCCACTCCAAAGAGAAGCC...TACAGGTCCATCCCTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGGAAAAGGTCATCTGGATGTaGTCCTATCCAGAATTCGAG | + |
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Preference number: 2 (lower is better) Translates to: LDPGTHHCSGLSDVSLSEKVIWM*SYPEFE Trigger: CTCGAATTCTGGATAGGACCACATCCAGATGACCTT...TTCCGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGGGCTTACAGGTGAACTaGAACTATATCCTCACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KENVVPNPGQVWSEVKRVGLQVN*NYILTH Trigger: ATGGGTGAGGATATAGTTCCAGTTCACCTGTAAGCC...CACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACATTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CAA 90 bp | GACTTCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTCCAAGCAGTTaGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: DFRVSKEKTSRAPSS*LFISRKREELSGCS Trigger: TGAGCAGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTCTACTGGTCTTCTCTTTAGAAACTCTGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCATGCTCCTGGAAAAAGGAAGAAACGAGTCAGGCAAACACCTCTCAGGCTTAGGGCTTCTTGCCTaGGTAAGTCTGCTGATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SFMLLEKGRNESGKHLSGLGLLA*VSLLMS Trigger: AGACATCAGCAGACTTACTCAGGCAAGAAGCCCTAA...GCCTGAGAGGTGTTTGCCTGACTCGTTTCTTCCTTTTTCCAGGAGCATGAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGGAAGAAGTAAACTTCTTTTaGCTGAGCTCTATGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LDPGTHHCSGLSDVSLSEEVNFF*LSSMVW Trigger: CCAGACCATAGAGCTCAGGCAAAAGAAGTTTACTTC...TTCCGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CAA 90 bp | GGACAGAACACTGAGTCAATATTACTCTTGAGACTTAAGGTCCCATaGAATTTGCCTGCTAGGTTTGTGCTGGACCCTGGGACTCATCAC | + |
|
Preference number: 2 (lower is better) Translates to: GQNTESILLLRLKVP*NLPARFVLDPGTHH Trigger: GTGATGAGTCCCAGGGTCCAGCACAAACCTAGCAGGCAAATTCAATGGGACCTTAAGTCTCAAGAGTAATATTGACTCAGTGTTCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCTTTCTGTCAGTTTCATaGTCCTGGAAAAAGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KPWSGLERGQTCETVVQGFLSVS*SWKKEE Trigger: TTCTTCCTTTTTCCAGGAGCATGAAACTGACAGAAA...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTAGAAGTTGATGGCCATACTTGGCCTTCCTATGTCTATGAAAGTGAAACTCCGTGCCCAAACCAATaGCTTCTCTTTGGAGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GLEVDGHTWPSYVYESETPCPNQ*LLFGVD Trigger: GTCCACTCCAAAGAGAAGCCATTGGTTTGGGCACGG...AGTTTCACTTTCATAGACATAGGAAGGCCAAGTATGGCCATCAACTTCTAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTTATCTGTCTAGTCATTaGACTTTGGAAGCAAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ELQAVCCSSPGKGKSSRAYLSSH*TLEASS Trigger: GGAACTTGCTTCCAAAGTCCAATGACTAGACAGATA...AGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CAA 90 bp | AACACTGAGTCAATATTACTCTTGAGACTTAAGGTCCCATTGAATTaGCCTGCTAGGTTTGTGCTGGACCCTGGGACTCATCACTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: NTESILLLRLKVPLN*PARFVLDPGTHHCS Trigger: TGAGCAGTGATGAGTCCCAGGGTCCAGCACAAACCTAGCAGGCAAATTCAATGGGACCTTAAGTCTCAAGAGTAATATTGACTCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTTTCTGTCAGTTTCATaGTCCTGGAAAAAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: FVLDPGTHHCSGLSDVSLFLSVS*SWKKEE Trigger: TTCTTCCTTTTTCCAGGAGCATGAAACTGACAGAAA...AAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGATGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGTCAGTTTCATGCTCCTaGAAAAAGGAAGAAACGAGT | + |
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Preference number: 2 (lower is better) Translates to: SGCGPIQNSRHQEKYIQESVSCS*KKEETS Trigger: ACTCGTTTCTTCCTTTTTCCAGGAGCATGAAACTGA...CTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACATCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCATTGGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATATTCCAGCTGAAGCCATaGCCACAATGCCCGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: SHWTLEASSMFNFIGLLIFQLKP*PQCPFL Trigger: TAAGAACGGGCATTGTGGGCATGGCTTCAGCTGGAA...TATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATAGAAATACGGCTTACACCAATGGCTTCTCTTTaGAGTGGACTGGGTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: EASSMFNFIGLLIEIRLTPMASL*SGLGPL Trigger: TAGAGGACCCAGTCCACTCCAAAGAGAAGCCATTGG...TGTAAGCCGTATTTCTATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCATTGGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATATCAGTTTCATGCTCCTaGAAAAAGGAAGAAACGAGT | + |
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Preference number: 2 (lower is better) Translates to: SHWTLEASSMFNFIGLLISVSCS*KKEETS Trigger: ACTCGTTTCTTCCTTTTTCCAGGAGCATGAAACTGA...TATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CCA 72 bp | AAAGCCAACGCCGTGCCCAAACCAATGGCTTCTCTTTaGAGTGGACTGGGTCCTCTAGTCAGAGATGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: KANAVPKPMASL*SGLGPLVRDEV Trigger: CACCTCATCTCTGACTAGAGGACCCAGTCCACTCCAAAGAGAAGCCATTGGTTTGGGCACGGCGTTGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR-3UTR CAA 90 bp | GAAAATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAAATTTGCCTGCTAGGTTaGTGCTGGACCCTGGGACTC | + |
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Preference number: 3 (lower is better) Translates to: ENVVPNPGQVWSEVKRVKICLLG*CWTLGL Trigger: GAGTCCCAGGGTCCAGCACAAACCTAGCAGGCAAAT...TTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACATTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGCTAGTGTGGCGTGACTaGGAGGCAGGACATTTAATA | + |
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Preference number: 3 (lower is better) Translates to: VLDPGTHHCSGLSDVSLSLVWRD*EAGHLI Trigger: TATTAAATGTCCTGCCTCCAAGTCACGCCACACTAG...CGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR TCA 72 bp | TCAGGGCTAGGAAAACAACACTGCCTGCCAGTCCTGTaGGCCAGGGGACAGAACACTGAGTCAATATTACTC | + |
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Preference number: 3 (lower is better) Translates to: SGLGKQHCLPVL*ARGQNTESILL Trigger: GAGTAATATTGACTCAGTGTTCTGTCCCCTGGCTCACAGGACTGGCAGGCAGTGTTGTTTTCCTAGCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CCA 72 bp | AATTCGAGGCACCAGGAAAAGTATATACAGGAGGGATaGACCTGTAGGTGCACAGCACATCGGGAAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: NSRHQEKYIQEG*TCRCTAHREAI Trigger: GATGGCTTCCCGATGTGCTGTGCACCTACAGGTCCATCCCTCCTGTATATACTTTTCCTGGTGCCTCGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CAA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCATGGTCTGGGGTATTTaGTTAGAAAACCCTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: KPWSGLERGQTCETVVQGMVWGI*LENPRK Trigger: TTTTCTAGGGTTTTCTAACAAAATACCCCAGACCAT...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTCCAAGCAGTTTGTTGTTCATCACCAATGGCTTCTCTTaGGAGTGGACTGGGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: FRVSKEKTSRAPSSLLFITNGFS*EWTGSS Trigger: AGAGGACCCAGTCCACTCCAAAGAGAAGCCATTGGT...GATGAACAACAAACTGCTTGGAGCTCTACTGGTCTTCTCTTTAGAAACTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR CCA 72 bp | AGCCGGCCTGATAGAGGACTTCTAGGCTCATATATATaGCGAAGTAAACTTCTTTTGCCTGAGCTCTATGGT | + |
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Preference number: 3 (lower is better) Translates to: SRPDRGLLGSYI*RSKLLLPELYG Trigger: ACCATAGAGCTCAGGCAAAAGAAGTTTACTTCGCCATATATATGAGCCTAGAAGTCCTCTATCAGGCCGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CCA 72 bp | AAACACCTCTCAGGCTTAGAAGTTGATGGCCATACTTaGCCTTCCTATGTCTATGAAAGTGAAACTTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: KHLSGLEVDGHT*PSYVYESETSS Trigger: GCTGGAAGTTTCACTTTCATAGACATAGGAAGGCCAAGTATGGCCATCAACTTCTAAGCCTGAGAGGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| 3UTR CCA 72 bp | CCCCACAACATAAATACCGATACCTTACCTCTAGTGTaGCGTGACTTGGAGGCAGGACATTTAATAAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: PHNINTDTLPLV*RDLEAGHLIKV Trigger: AACCTTTATTAAATGTCCTGCCTCCAAGTCACGCCACACTAGAGGTAAGGTATCGGTATTTATGTTGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGTGTGTGTGTGTGGAGGGAATAGTAGATGGCTGGAAACTATTTTCAACACGAAGTAAACTTCTTTaGCCTGAGCTCTATGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: QKCVCVEGIVDGWKLFSTRSKLL*PELYGL Trigger: CAGACCATAGAGCTCAGGCAAAAGAAGTTTACTTCG...TGTTGAAAATAGTTTCCAGCCATCTACTATTCCCTCCACACACACACACTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCATTGGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATACGAAGTAAACTTCTTTaGCCTGAGCTCTATGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SHWTLEASSMFNFIGLLIRSKLL*PELYGL Trigger: CAGACCATAGAGCTCAGGCAAAAGAAGTTTACTTCG...TATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR CCA 72 bp | CAAAAGTGTGTGTGTGTGGAGGGAATAGTAGATGGCTaGAAACTATTTTCAACAGAGATTAGCATTAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: QKCVCVEGIVDG*KLFSTEISISV Trigger: CACACTAATGCTAATCTCTGTTGAAAATAGTTTCCAGCCATCTACTATTCCCTCCACACACACACACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| 3UTR TCA 72 bp | CTTCATAGGATTGCTGATAGAAATACGGCTTACAGGTaGACTGGAACTATATCCTCACCCATACATGAATTA | + |
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Preference number: 3 (lower is better) Translates to: LHRIADRNTAYR*TGTISSPIHEL Trigger: TAATTCATGTATGGGTGAGGATATAGTTCCAGTTCACCTGTAAGCCGTATTTCTATCAGCAATCCTATGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | GTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGGCCGGGAGAGCAGCCTaGAGCCACGCCCACACACCG | + |
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Preference number: 4 (lower is better) Translates to: VLDPGTHHCSGLSDVSLSAGRAA*SHAHTP Trigger: CGGTGTGTGGGCGTGGCTTCAGGCTGCTCTCCCGGC...CGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | GAGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGACGGCCCCAGATGCTaGCTCATCGGGTCCCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ELQAVCCSSPGKGKSSRADGPRC*LIGSLQ Trigger: TTGAAGGGACCCGATGAGTCAGCATCTGGGGCCGTC...AGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGCTCACCCCTCTGTACAGGATCCTCTaGGCAGGACTCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QFVVHLQEKGRALGLLTPLYRIL*AGLSSS Trigger: GGAGCTGCTGAGTCCTGCCCAGAGGATCCTGTACAG...AGGGGTGAGCAGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCATTGAATTTGCCTGCTAGGTTTGTGCTGGACCCTGGGACTCATCACTGCCCCTGCTGGTGGGCTTaGAAAAGTCTGAGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLNLPARFVLDPGTHHCPCWWA*KSLRGR Trigger: CCTCCCTCTCAGACTTTTCCAAGCCCACCAGCAGGG...GCAGTGATGAGTCCCAGGGTCCAGCACAAACCTAGCAGGCAAATTCAATGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCATCTCTCCAGGGTTCTaGCCCTTGTTCCAGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPWSGLERGQTCETVVQGISPGF*PLFQLR Trigger: ACGCAGCTGGAACAAGGGGCAGAACCCTGGAGAGAT...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCGAGTGTGACCAGCTGTaGTGTAGCAGCGAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPWSGLERGQTCETVVQGECDQL*CSSEAF Trigger: GAAAGCCTCGCTGCTACAGCACAGCTGGTCACACTC...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGGAAAGGTTTCTCCCACCCTaGGTGGGTCCTCTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDPGTHHCSGLSDVSLSERFLPP*VGPLVS Trigger: AGACACCAGAGGACCCACGCAGGGTGGGAGAAACCT...TTCCGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCATGAGGTCAGAACTCTaGCAAAAGCCCCCTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPWSGLERGQTCETVVQGMRSEL*QKPPPQ Trigger: CTGCGGAGGGGGCTTTTGCCAGAGTTCTGACCTCAT...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR TCA 90 bp | GGTCATCTGGATGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACGAGTGTGTGACCTGGTaGGTGAGGAGCCGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHLDVVLSRIRGTRKSIYECVTW*VRSRES Trigger: GCTCTCCCGGCTCCTCACTCACCAGGTCACACACTC...GTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACATCCAGATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGAGTGAAACTTCCAGCTaGAGCCATGCCCACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLDPGTHHCSGLSDVSLSSETSS*SHAHNA Trigger: GGCATTGTGGGCATGGCTTCAGCTGGAAGTTTCACT...CGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176176.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGTTAGGGCTTCTTGCCTaGGTAAGTCTGCTGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VLDPGTHHCSGLSDVSLSLGLLA*VSLLMS Trigger: CGACATCAGCAGACTTACTCAGGCAAGAAGCCCTAA...CGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176176.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTATCTCTCCAGGGTTCTaGCCCTTGTTCCAGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FVLDPGTHHCSGLSDVSLISPGF*PLFQLR Trigger: ACGCAGCTGGAACAAGGGGCAGAACCCTGGAGAGAT...AAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGGTTGGACTTGTCCTCTaGAACAGAGCATCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KENVVPNPGQVWSEVKRVVGLVL*NRASLL Trigger: CAGCAGCGATGCTCTGTTGCAGAGGACAAGTCCAAC...CACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACATTTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGATGTCTGATGAGGGCAGAGTTAAAGCCAACGCCGTGCCCAAACCAATGGCCTTCTACCCAGTATaGTGCCTGATCTTGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLMSDEGRVKANAVPKPMAFYPV*CLILTW Trigger: CCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGC...CATTGGTTTGGGCACGGCGTTGGCTTTAACTCTGCCCTCATCAGACATCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCTTCCAGCTGAAGCCATaGCCACAATGCCCGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KPWSGLERGQTCETVVQGFQLKP*PQCPFL Trigger: TAAGAACGGGCATTGTGGGCATGGCTTCAGCTGGAA...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176176.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGTTAATGCCTTGTCTCTaGTTGTCAGGAGCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKQFVVHLQEKGRALGLLMPCL*LSGALG Trigger: CCCCAGGGCTCCTGACAACCAGAGACAAGGCATTAA...CAGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| CDS-3UTR CCA 90 bp | GTCCCATTGAATTTGCCTGCTAGGTTTGTGCTGGACCCTGGGACTCATCACTGCGGGCTCTCTCCAGAGTaGATAATCTTCTTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPLNLPARFVLDPGTHHCGLSPE*IIFLWL Trigger: CAGCCACAAGAAGATTATCCACTCTGGAGAGAGCCC...GCAGTGATGAGTCCCAGGGTCCAGCACAAACCTAGCAGGCAAATTCAATGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGCTCACCCCTAAACTCCAGCCACACTaGCGACACACAAAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFVVHLQEKGRALGLLTPKLQPH*RHTKGF Trigger: GAAGCCTTTTGTGTGTCGCCAGTGTGGCTGGAGTTT...AGGGGTGAGCAGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR TCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCGGTTTTACCTCTGTGTaGATCCTCTGGTGCCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KPWSGLERGQTCETVVQGGFTSV*ILWCLM Trigger: CATTAGGCACCAGAGGATTCACACAGAGGTAAAACC...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCGCTCTAATTCTGTCCTaGGTTCTGGACAAAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPWSGLERGQTCETVVQGALILS*VLDKGP Trigger: TGGACCTTTGTCCAGAACCCAGGACAGAATTAGAGC...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGTGAAACTTCCAGCTGAAGCCATGCCCACAATGCCCGTTCTTAGGGCTGAAGTTGCTCCCTGCTaGTGGGCTTGGAAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKVKLPAEAMPTMPVLRAEVAPC*WAWKSL Trigger: CAGACTTTTCCAAGCCCACCAGCAGGGAGCAACTTC...AGCCCTAAGAACGGGCATTGTGGGCATGGCTTCAGCTGGAAGTTTCACTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGATGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGTTCTCCCACCCTGCGTaGGTCCTCTGGTGTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGCGPIQNSRHQEKYIQEFSHPA*VLWCLM Trigger: CATCAGACACCAGAGGACCCACGCAGGGTGGGAGAA...CTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACATCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCTCCGTGGGTCCTCTaGTGTCTAATGAGAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FVLDPGTHHCSGLSDVSLSPWVL*CLMRET Trigger: GGTCTCTCTCATTAGACACCAGAGGACCCACGGAGA...AAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AGTGATTTCTGTCAGTTTCATGCTCCTGGAAAAAGGAAGAAACGAGTCAGGCAACTTCAACACTGTGACTaGCTCCTCAGGGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDFCQFHAPGKRKKRVRQLQHCD*LLRGQA Trigger: GGCCTGGCCCCTGAGGAGGCAGTCACAGTGTTGAAG...TTGCCTGACTCGTTTCTTCCTTTTTCCAGGAGCATGAAACTGACAGAAATCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR CCA 90 bp | GAGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTATGAGGTTGAACTTCTaGCTAAACCCTCTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ELQAVCCSSPGKGKSSRAMRLNF*LNPLPH Trigger: GTGTGGCAGAGGGTTTAGCCAGAAGTTCAACCTCAT...AGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | TCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTCCAAGCAGTTTGTTGTTCATCTGTCCCTTCAACACTGTaGCTGCCTCCTCAGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEFLKRRPVELQAVCCSSVPSTL*LPPQGP Trigger: TGGCCCCTGAGGAGGCAGTCACAGTGTTGAAGGGAC...AGATGAACAACAAACTGCTTGGAGCTCTACTGGTCTTCTCTTTAGAAACTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | CGTGACTTGGAGGCAGGACATTTAATAAAGGTTAAACAAGGTCATCTGGATGTGCCAGAGTGTTTCCTCTaGTGGACCGTGAGAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLEAGHLIKVKQGHLDVPECFL*WTVRDA Trigger: GGCGTCTCTCACGGTCCATCAGAGGAAACACTCTGG...CACATCCAGATGACCTTGTTTAACCTTTATTAAATGTCCTGCCTCCAAGTCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | CTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGGGATGGACCTGTACCGGTATGTGTCTTCTaGTGTCTCATGAGCGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIRGTRKSIYRRDGPVPVCVF*CLMSVP Trigger: GGGTACGCTCATGAGACATCAGAAGACACATACCGG...TACAGGTCCATCCCTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR CCA 90 bp | GGCTCATATATATGGCGAAGTAAACTTCTTTTGCCTGAGCTCTATGGTCTGGGGGCCACAGCCACGTCATaGAAGGCCATTAATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSYIWRSKLLLPELYGLGATATS*KAINAL Trigger: CAAGGCATTAATGGCCTTCCATGACGTGGCTGTGGC...CCCCAGACCATAGAGCTCAGGCAAAAGAAGTTTACTTCGCCATATATATGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| CDS-3UTR CCA 90 bp | GGCTTAGAAGTTGATGGCCATACTTGGCCTTCCTATGTCTATGAAAGTGAAACTCTGTACAGGATCCTCTaGGCAGGACTCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLEVDGHTWPSYVYESETLYRIL*AGLSSS Trigger: GGAGCTGCTGAGTCCTGCCCAGAGGATCCTGTACAG...AGTTTCACTTTCATAGACATAGGAAGGCCAAGTATGGCCATCAACTTCTAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR CCA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCCTGCGTGATGAGTTTTaGTTTGGAAAAGGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPWSGLERGQTCETVVQGLRDEF*FGKGNS Trigger: GGAATTGCCTTTTCCAAACCAAAACTCATCACGCAG...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTCCAAGCAGTTTGTTGTTCATCTTTCTGCCTGAAGCGCTaGCCACACTGGGGACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEFLKRRPVELQAVCCSSFCLKR*PHWGQA Trigger: TGCCTGTCCCCAGTGTGGCCAGCGCTTCAGGCAGAA...AGATGAACAACAAACTGCTTGGAGCTCTACTGGTCTTCTCTTTAGAAACTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | CGTGACTTGGAGGCAGGACATTTAATAAAGGTTAAACAAGGTCATCTGGATGTGGGGCTTGGAAAAGTCTaGGAGGGAGGTCCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDLEAGHLIKVKQGHLDVGLGKV*EGGPFS Trigger: GCTGAATGGACCTCCCTCTCAGACTTTTCCAAGCCC...CACATCCAGATGACCTTGTTTAACCTTTATTAAATGTCCTGCCTCCAAGTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | AAAGTGTGTGTGTGTGGAGGGAATAGTAGATGGCTGGAAACTATTTTCAACAGAACAGCCTGGAGCTTCTaGCTGGAAGTTGCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCGGNSRWLETIFNRTAWSF*LEVAPC Trigger: GCAGGGAGCAACTTCCAGTCAGAAGCTCCAGGCTGT...TCTGTTGAAAATAGTTTCCAGCCATCTACTATTCCCTCCACACACACACACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
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| CDS-3UTR TCA 90 bp | TGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGGGATGGTTCTCTGGAGCTTCATaGGGTCAGAACTCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CGPIQNSRHQEKYIQEGWFSGAS*GQNSGK Trigger: TTTGCCAGAGTTCTGACCTCATGAAGCTCCAGAGAA...CCATCCCTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTAGAAGTTGATGGCCATACTTGGCCTTCCTATGTCTATGAAAGTGAAACTGGTAACTCCCCTGTATaGATCCTCTGGTGCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLEVDGHTWPSYVYESETGNSPV*ILWCPM Trigger: CATCGGGCACCAGAGGATTCATACAGGGGAGTTACC...AGTTTCACTTTCATAGACATAGGAAGGCCAAGTATGGCCATCAACTTCTAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAGACTTTTGGACTTCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTCCACCAGAAAGCATCCGCTaGCATCTCTCCAGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EERLLDFRVSKEKTSRAPPESIR*HLSRVL Trigger: CAGAACCCTGGAGAGATGGCAGCGGATGCTTTCTGG...TGGAGCTCTACTGGTCTTCTCTTTAGAAACTCTGAAGTCCAAAAGTCTCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAAAATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTTTGGAGTGTGTCCTCTaGTGTCTAGTAAGAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGKCGSKPWSGLERGQTCLECVL*CLVRSD Trigger: GTCACTTCTTACTAGACACCAGAGGACACACTCCAA...ACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACATTTTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGACTTCTAGGCTCATATATATGGCGAAGTAAACTTCTTTTGCCTGAGCTCGCAACAGAGCATCGCTaGTGTCTCTCTCTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLLGSYIWRSKLLLPELATEHR*CLSLHL Trigger: GAGGTGAAGAGAGAGACAGCAGCGATGCTCTGTTGC...GAGCTCAGGCAAAAGAAGTTTACTTCGCCATATATATGAGCCTAGAAGTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTGTGTGTGTGGAGGGAATAGTAGATGGCTGGAAACTATTTTCAACAGAAACACGTGGTGCTTCTaGGGGCTGAACAGGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCGGNSRWLETIFNRNTWCF*GLNRFV Trigger: CACAAACCTGTTCAGCCCTCAGAAGCACCACGTGTT...TCTGTTGAAAATAGTTTCCAGCCATCTACTATTCCCTCCACACACACACACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGGGATGGGTGTCTAGTAAGAAGTaGCTTAAAAGCAAAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CGPIQNSRHQEKYIQEGWVSSKK*LKSKGT Trigger: CGTGCCTTTGCTTTTAAGTCACTTCTTACTAGACAC...CCATCCCTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AATGAAGAGAGACTTTTGGACTTCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTCCAGAAAGCATCCGCTaGCATCTCTCCAGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NEERLLDFRVSKEKTSRAPESIR*HLSRVL Trigger: CAGAACCCTGGAGAGATGGCAGCGGATGCTTTCTGG...AGCTCTACTGGTCTTCTCTTTAGAAACTCTGAAGTCCAAAAGTCTCTCTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| 3UTR CAA 72 bp | GTTTCTAAAGAGAAGACCAGTAGAGCTCCAAGCAGTTaGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSKEKTSRAPSS*LFISRKREELS Trigger: CGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTCTACTGGTCTTCTCTTTAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAGAGAGACTTTTGGACTTCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTTTAATGCCTTGTCTCTaGTTGTCAGGAGCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NEERLLDFRVSKEKTSRALMPCL*LSGALG Trigger: CCCCAGGGCTCCTGACAACCAGAGACAAGGCATTAA...AGCTCTACTGGTCTTCTCTTTAGAAACTCTGAAGTCCAAAAGTCTCTCTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGATGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGCTGCGTGATGAGTTTTaGTTTGGAAAAGGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGCGPIQNSRHQEKYIQELRDEF*FGKGNS Trigger: GGAATTGCCTTTTCCAAACCAAAACTCATCACGCAG...CTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACATCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | AGTCATTGGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATAGTTGCTCCCTGCTGGTaGGCTTGGAAAAGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHWTLEASSMFNFIGLLIVAPCW*AWKSLR Trigger: TCTCAGACTTTTCCAAGCCCACCAGCAGGGAGCAAC...TATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTGTGTGTGTGGAGGGAATAGTAGATGGCTGGAAACTATTTTCAACAGAATGAGGTTAACCTTCTaGGTGAAACTCCAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCGGNSRWLETIFNRMRLTF*VKLQPH Trigger: GTGTGGCTGGAGTTTCACCCAGAAGGTTAACCTCAT...TCTGTTGAAAATAGTTTCCAGCCATCTACTATTCCCTCCACACACACACACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR GCA 90 bp | AGTCATTGGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATACTTCACCTCCTTCATTaGTGGAACAGCCTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHWTLEASSMFNFIGLLILHLLH*WNSLEL Trigger: AAGCTCCAGGCTGTTCCAGCAATGAAGGAGGTGAAG...TATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | AGTCATTGGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATAGCTCTAATTCTGTCCTaGGTTCTGGACAAAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHWTLEASSMFNFIGLLIALILS*VLDKGP Trigger: TGGACCTTTGTCCAGAACCCAGGACAGAATTAGAGC...TATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| 3UTR CAA 72 bp | ATAAATACCGATACCTTACCTCTAGTGTGGCGTGACTaGGAGGCAGGACATTTAATAAAGGTTAAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: INTDTLPLVWRD*EAGHLIKVKQG Trigger: ACCTTGTTTAACCTTTATTAAATGTCCTGCCTCCAAGTCACGCCACACTAGAGGTAAGGTATCGGTATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAGAGAGACTTTTGGACTTCAGAGTTTCTAAAGAGAAGACCAGTAGAGCTATAAGGTTGAACTTTTaGCTAAATGCCTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NEERLLDFRVSKEKTSRAIRLNF*LNALPH Trigger: GTGTGGCAAGGCATTTAGCCAAAAGTTCAACCTTAT...AGCTCTACTGGTCTTCTCTTTAGAAACTCTGAAGTCCAAAAGTCTCTCTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| 3UTR CAA 72 bp | GGAATATCTAACCTGTATCTGTCTAGTCATTGGACTTaGGAAGCAAGTTCCATGTTTAACTTCATAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: GISNLYLSSHWT*EASSMFNFIGL Trigger: CAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACTAGACAGATACAGGTTAGATATTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGATGCCTTGTCTCTGGTaGTCAGGAGCCCTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLDPGTHHCSGLSDVSLSMPCLW*SGALGP Trigger: TGGCCCCAGGGCTCCTGACAACCAGAGACAAGGCAT...CGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS TCA 90 bp | GCTTCTGACTGGAAGTTGCTCCCTGCTGGTGGGCTTGGAAAAGTCTaGGAGGGAGGTCCATTCAGCACACACACTCTGAGGACTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASDWKLLPAGGLGKV*EGGPFSTHTLRTSG Trigger: TCCGGAAGTCCTCAGAGTGTGTGTGCTGAATGGACCTCCCTCTCAGACTTTTCCAAGCCCACCAGCAGGGAGCAACTTCCAGTCAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110110.9 ENSMUST00000176996.8 ENSMUST00000177530.8 |
||
| CDS GCA 90 bp | CACCTCCTTCATTGCTGGAACAGCCTGGAGCTTCTGACTGGAAGTTaGTCCCTGCTGGTGGGCTTGGAAAAGTCTGAGAGGGAGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLLHCWNSLELLTGS*SLLVGLEKSEREVH Trigger: ATGGACCTCCCTCTCAGACTTTTCCAAGCCCACCAGCAGGGAGCAACTTCCAGTCAGAAGCTCCAGGCTGTTCCAGCAATGAAGGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS GCA 90 bp | CTTCCAGCTGAAGCCATGCCCACAATGCCCGTTCTTAGGGCTTCTTaGCTGAGTAAGTCTGCTGATGTCGGGGACGAAAGAGAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPAEAMPTMPVLRAS*LSKSADVGDEREGS Trigger: AGAGCCCTCTCTTTCGTCCCCGACATCAGCAGACTTACTCAGGCAAGAAGCCCTAAGAACGGGCATTGTGGGCATGGCTTCAGCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167682.8 ENSMUST00000176176.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTATGCCTTGTCTCTGGTaGTCAGGAGCCCTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ELQAVCCSSPGKGKSSRAMPCLW*SGALGP Trigger: TGGCCCCAGGGCTCCTGACAACCAGAGACAAGGCAT...AGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGTCCCTGCTGGTGGGCTaGGAAAAGTCTGAGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLDPGTHHCSGLSDVSLSSLLVG*EKSERE Trigger: CTCCCTCTCAGACTTTTCCAAGCCCACCAGCAGGGA...CGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS CCA 90 bp | AGTCTGCTGATGTCGGGGACGAAAGAGAGGGCTCTAATTCTGTCCTaGGTTCTGGACAAAGGTCCAGAAAGCATCCGCTGCCATCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLMSGTKERALILS*VLDKGPESIRCHLS Trigger: GGAGAGATGGCAGCGGATGCTTTCTGGACCTTTGTCCAGAACCCAGGACAGAATTAGAGCCCTCTCTTTCGTCCCCGACATCAGCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167682.8 ENSMUST00000176176.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGTCTTCACCTCCTTCATaGCTGGAACAGCCTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLDPGTHHCSGLSDVSLSSSPPS*LEQPGA Trigger: AGCTCCAGGCTGTTCCAGCAATGAAGGAGGTGAAGA...CGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS CCA 90 bp | AAGCCACGCCCACACTCGGGACAAACAAGGGGGCTCTCTCCAGAGTaGATAATCTTCTTGTGGCTGTTGAGGGAGGATACATACATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KPRPHSGQTRGLSPE*IIFLWLLREDTYMK Trigger: CTTCATGTATGTATCCTCCCTCAACAGCCACAAGAAGATTATCCACTCTGGAGAGAGCCCCCTTGTTTGTCCCGAGTGTGGGCGTGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGTTGTTCAGGGCTGGTGCCCAATGAGGTaGAACTTCTGGCTAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPWSGLERGQTCETVVQGWCPMR*NFWLNP Trigger: AGGGTTTAGCCAGAAGTTCAACCTCATTGGGCACCA...GCCCTGAACAACAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS GCA 90 bp | TCTTCAGAATTCTCGTTGGACTTGTCCTCTGCAACAGAGCATCGCTaGTGTCTCTCTCTTCACCTCCTTCATTGCTGGAACAGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEFSLDLSSATEHR*CLSLHLLHCWNSLE Trigger: CTCCAGGCTGTTCCAGCAATGAAGGAGGTGAAGAGAGAGACAGCAGCGATGCTCTGTTGCAGAGGACAAGTCCAACGAGAATTCTGAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGATGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAGGAGGCTTCTGACTGGAAGTaGCTCCCTGCTGGTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGCGPIQNSRHQEKYIQEASDWK*LPAGGL Trigger: AAGCCCACCAGCAGGGAGCAACTTCCAGTCAGAAGC...CTCCTGTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACATCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCCAAGCAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTCAGGCCAAGGTCTGTTaGTTTACTGTCGCCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ELQAVCCSSPGKGKSSRAQAKVC*FTVAFY Trigger: GTAGAAGGCGACAGTAAACAAACAGACCTTGGCCTG...AGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTGCTTGGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATTTCTGTCAGTTTCATGCTCCTGGAAAAAGGAAGAAACGAGTCAGGCAACCAGGGTTCTGCCCCTaGTTCCAGCTGCGTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDFCQFHAPGKRKKRVRQPGFCP*FQLRDE Trigger: CTCATCACGCAGCTGGAACAAGGGGCAGAACCCTGG...TTGCCTGACTCGTTTCTTCCTTTTTCCAGGAGCATGAAACTGACAGAAATCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGTTGTTCATCTCCAGGAAAAGGGAAGAGCTCTCGGGCTGCTCACCCCTCCCCGTATGTGTCTTTaGGTGTCTGATGAAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QFVVHLQEKGRALGLLTPPRMCL*VSDEKR Trigger: TCTCTTTTCATCAGACACCAAAAGACACATACGGGG...AGGGGTGAGCAGCCCGAGAGCTCTTCCCTTTTCCTGGAGATGAACAACAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS GCA 90 bp | CATGGGCTAAAGAACGTCTTCAGAATTCTCGTTGGACTTGTCCTCTaGAACAGAGCATCGCTGCTGTCTCTCTCTTCACCTCCTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HGLKNVFRILVGLVL*NRASLLSLSSPPSL Trigger: CAATGAAGGAGGTGAAGAGAGAGACAGCAGCGATGCTCTGTTGCAGAGGACAAGTCCAACGAGAATTCTGAAGACGTTCTTTAGCCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS GCA 90 bp | GGCCAGGCCAAGGTCTGTTTGTTTACTGTCGCCTTCTACCCAGTATaGTGCCTGATCTTGACATGGGCTAAAGAACGTCTTCAGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQAKVCLFTVAFYPV*CLILTWAKERLQNS Trigger: AGAATTCTGAAGACGTTCTTTAGCCCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGCGACAGTAAACAAACAGACCTTGGCCTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGGTTCCAAACCCTGGTCAGGTCTGGAGCGAGGTCAAACGTGTGAAACTGGTGATGAGTTTTGGTTaGGAAAAGGCAATTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVVPNPGQVWSEVKRVKLVMSFG*EKAIPR Trigger: CCTGGGAATTGCCTTTTCCAAACCAAAACTCATCAC...CAGTTTCACACGTTTGACCTCGCTCCAGACCTGACCAGGGTTTGGAACCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTGTGTGTGGAGGGAATAGTAGATGGCTGGAAACTATTTTCAACAGACCAGGGTTCTGCCCCTaGTTCCAGCTGCGTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVCVCGGNSRWLETIFNRPGFCP*FQLRDE Trigger: CTCATCACGCAGCTGGAACAAGGGGCAGAACCCTGG...TCTGTTGAAAATAGTTTCCAGCCATCTACTATTCCCTCCACACACACACACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACCCTGGGACTCATCACTGCTCAGGTCTTTCTGATGTTTCCCTTTCGGAATCTTCAGAATTCTCGTaGGACTTGTCCTCTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LDPGTHHCSGLSDVSLSESSEFS*DLSSAT Trigger: TGTTGCAGAGGACAAGTCCAACGAGAATTCTGAAGA...TTCCGAAAGGGAAACATCAGAAAGACCTGAGCAGTGATGAGTCCCAGGGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | GGTCATCTGGATGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACTTTTGGCTAAATGCCTaGCCACACTCAGGGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: GHLDVVLSRIRGTRKSIYFWLNA*PHSGHT Trigger: CGTGTGCCCTGAGTGTGGCAAGGCATTTAGCCAAAA...GTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACATCCAGATGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS GCA 90 bp | CAGGCCAAGGTCTGTTTGTTTACTGTCGCCTTCTACCCAGTATGCTaGCTGATCTTGACATGGGCTAAAGAACGTCTTCAGAATTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QAKVCLFTVAFYPVC*LILTWAKERLQNSR Trigger: ACGAGAATTCTGAAGACGTTCTTTAGCCCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGCGACAGTAAACAAACAGACCTTGGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | GGTCATCTGGATGTGGTCCTATCCAGAATTCGAGGCACCAGGAAAAGTATATACAAGGCCATTAATGCCTaGTCTCTGGTTGTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHLDVVLSRIRGTRKSIYKAINA*SLVVRS Trigger: GCTCCTGACAACCAGAGACAAGGCATTAATGGCCTT...GTATATACTTTTCCTGGTGCCTCGAATTCTGGATAGGACCACATCCAGATGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCATTGAATTTGCCTGCTAGGTTTGTGCTGGACCCTGGGACTCATCACTGCTATAAGGTTGAACTTTaGGCTAAATGCCTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VPLNLPARFVLDPGTHHCYKVEL*AKCLAT Trigger: TGTGGCAAGGCATTTAGCCAAAAGTTCAACCTTATA...GCAGTGATGAGTCCCAGGGTCCAGCACAAACCTAGCAGGCAAATTCAATGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS CCA 90 bp | TTGTTTACTGTCGCCTTCTACCCAGTATGCTGCCTGATCTTGACATaGGCTAAAGAACGTCTTCAGAATTCTCGTTGGACTTGTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFTVAFYPVCCLILT*AKERLQNSRWTCPL Trigger: CAGAGGACAAGTCCAACGAGAATTCTGAAGACGTTCTTTAGCCCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGCGACAGTAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATAGAAATACGGCTTACAAAGGCCATTAATGCCTaGTCTCTGGTTGTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EASSMFNFIGLLIEIRLTKAINA*SLVVRS Trigger: GCTCCTGACAACCAGAGACAAGGCATTAATGGCCTT...TGTAAGCCGTATTTCTATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176176.8 ENSMUST00000177530.8 |
||
| CDS-3UTR CAA 90 bp | AGTCATTGGACTTTGGAAGCAAGTTCCATGTTTAACTTCATAGGATTGCTGATAATCTTCTTGTGGCTGTaGAGGGAGGATACATACATG | + |
|
Preference number: 5 (lower is better) Translates to: SHWTLEASSMFNFIGLLIIFLWL*REDTYM Trigger: CATGTATGTATCCTCCCTCAACAGCCACAAGAAGAT...TATCAGCAATCCTATGAAGTTAAACATGGAACTTGCTTCCAAAGTCCAATGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177530.8 |
||
| CDS TCA 72 bp | CCCCAGATGCTGACTCATCGGGTCCCTTCAACACTGTaGCTGCCTCCTCAGGGGCCAGGCCAAGGTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PQMLTHRVPSTL*LPPQGPGQGLF Trigger: AAACAGACCTTGGCCTGGCCCCTGAGGAGGCAGTCACAGTGTTGAAGGGACCCGATGAGTCAGCATCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS CAA 72 bp | TGTGACTGCCTCCTCAGGGGCCAGGCCAAGGTCTGTTaGTTTACTGTCGCCTTCTACCCAGTATGCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CDCLLRGQAKVC*FTVAFYPVCCL Trigger: CAGGCAGCATACTGGGTAGAAGGCGACAGTAAACAAACAGACCTTGGCCTGGCCCCTGAGGAGGCAGTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS TCA 72 bp | TGGAAGTTGCTCCCTGCTGGTGGGCTTGGAAAAGTCTaGGAGGGAGGTCCATTCAGCACACACACTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WKLLPAGGLGKV*EGGPFSTHTLR Trigger: CCTCAGAGTGTGTGTGCTGAATGGACCTCCCTCTCAGACTTTTCCAAGCCCACCAGCAGGGAGCAACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110110.9 ENSMUST00000176996.8 ENSMUST00000177530.8 |
||
| CDS GCA 72 bp | CATTGCTGGAACAGCCTGGAGCTTCTGACTGGAAGTTaGTCCCTGCTGGTGGGCTTGGAAAAGTCTGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HCWNSLELLTGS*SLLVGLEKSER Trigger: CCTCTCAGACTTTTCCAAGCCCACCAGCAGGGAGCAACTTCCAGTCAGAAGCTCCAGGCTGTTCCAGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS CCA 72 bp | CCTCCTTCATTGCTGGAACAGCCTGGAGCTTCTGACTaGAAGTTGCTCCCTGCTGGTGGGCTTGGAAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPSLLEQPGASD*KLLPAGGLGKV Trigger: GACTTTTCCAAGCCCACCAGCAGGGAGCAACTTCCAGTCAGAAGCTCCAGGCTGTTCCAGCAATGAAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS CAA 72 bp | CTGATGTCTCATGAGCGTACCCTTTTGGCCAAAGCGTaGTCCGCAGTCCGGGCAAACGTGAGGTTTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LMSHERTLLAKA*SAVRANVRFLT Trigger: GGTGAGAAACCTCACGTTTGCCCGGACTGCGGACAACGCTTTGGCCAAAAGGGTACGCTCATGAGACATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS CCA 72 bp | ATACCGGGGACGAAAGAGAGGGCTCTAATTCTGTCCTaGGTTCTGGACAAAGGTCCAGAAAGCATCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IPGTKERALILS*VLDKGPESIRC Trigger: GCAGCGGATGCTTTCTGGACCTTTGTCCAGAACCCAGGACAGAATTAGAGCCCTCTCTTTCGTCCCCGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110110.9 ENSMUST00000176996.8 ENSMUST00000177530.8 |
||
| CDS CCA 72 bp | ATGTCGGGGACGAAAGAGAGGGCTCTAATTCTGTCCTaGGTTCTGGACAAAGGTCCAGAAAGCATCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MSGTKERALILS*VLDKGPESIRC Trigger: GCAGCGGATGCTTTCTGGACCTTTGTCCAGAACCCAGGACAGAATTAGAGCCCTCTCTTTCGTCCCCGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167682.8 ENSMUST00000176176.8 |
||
| CDS CAA 90 bp | CACTCGGGACAAACAAGGGGGCTCTCTCCAGAGTGGATAATCTTCTaGTGGCTGTTGAGGGAGGATACATACATGAAGCCTCGCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: HSGQTRGLSPEWIIF*WLLREDTYMKPRPH Trigger: GTGTGGGCGAGGCTTCATGTATGTATCCTCCCTCAACAGCCACAAGAAGATTATCCACTCTGGAGAGAGCCCCCTTGTTTGTCCCGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS CCA 72 bp | CCACACTCGGGACAAACAAGGGGGCTCTCTCCAGAGTaGATAATCTTCTTGTGGCTGTTGAGGGAGGATACA | + |
|
Preference number: 6 (lower is better) Translates to: PHSGQTRGLSPE*IIFLWLLREDT Trigger: TGTATCCTCCCTCAACAGCCACAAGAAGATTATCCACTCTGGAGAGAGCCCCCTTGTTTGTCCCGAGTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS CAA 72 bp | GGGCTCTCTCCAGAGTGGATAATCTTCTTGTGGCTGTaGAGGGAGGATACATACATGAAGCCTCGCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLSPEWIIFLWL*REDTYMKPRPH Trigger: GTGTGGGCGAGGCTTCATGTATGTATCCTCCCTCAACAGCCACAAGAAGATTATCCACTCTGGAGAGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS GCA 72 bp | TTCTCGTTGGACTTGTCCTCTGCAACAGAGCATCGCTaGTGTCTCTCTCTTCACCTCCTTCATTGCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSLDLSSATEHR*CLSLHLLHCWN Trigger: GTTCCAGCAATGAAGGAGGTGAAGAGAGAGACAGCAGCGATGCTCTGTTGCAGAGGACAAGTCCAACGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS CCA 72 bp | ACAAGGGGGCTCTCTCCAGAGTGGATAATCTTCTTGTaGCTGTTGAGGGAGGATACATACATGAAGCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: TRGLSPEWIIFL*LLREDTYMKPR Trigger: GCGAGGCTTCATGTATGTATCCTCCCTCAACAGCCACAAGAAGATTATCCACTCTGGAGAGAGCCCCCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
||
| CDS GCA 72 bp | AAGAACGTCTTCAGAATTCTCGTTGGACTTGTCCTCTaGAACAGAGCATCGCTGCTGTCTCTCTCTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: KNVFRILVGLVL*NRASLLSLSSP Trigger: AGGTGAAGAGAGAGACAGCAGCGATGCTCTGTTGCAGAGGACAAGTCCAACGAGAATTCTGAAGACGTTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
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| CDS CCA 72 bp | TTGACATGGGCTAAAGAACGTCTTCAGAATTCTCGTTaGACTTGTCCTCTGCAACAGAGCATCGCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LTWAKERLQNSR*TCPLQQSIAAV Trigger: GACAGCAGCGATGCTCTGTTGCAGAGGACAAGTCCAACGAGAATTCTGAAGACGTTCTTTAGCCCATGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
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| CDS CCA 72 bp | GTCGCCTTCTACCCAGTATGCTGCCTGATCTTGACATaGGCTAAAGAACGTCTTCAGAATTCTCGTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: VAFYPVCCLILT*AKERLQNSRWT Trigger: AGTCCAACGAGAATTCTGAAGACGTTCTTTAGCCCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
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| CDS CAA 90 bp | GTCTGTTTGTTTACTGTCGCCTTCTACCCAGTATGCTGCCTGATCTaGACATGGGCTAAAGAACGTCTTCAGAATTCTCGTTGGACTTGT | + |
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Preference number: 6 (lower is better) Translates to: VCLFTVAFYPVCCLI*TWAKERLQNSRWTC Trigger: ACAAGTCCAACGAGAATTCTGAAGACGTTCTTTAGCCCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGCGACAGTAAACAAACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
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| CDS GCA 72 bp | AAGGTCTGTTTGTTTACTGTCGCCTTCTACCCAGTATaGTGCCTGATCTTGACATGGGCTAAAGAACGTCTT | + |
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Preference number: 6 (lower is better) Translates to: KVCLFTVAFYPV*CLILTWAKERL Trigger: AAGACGTTCTTTAGCCCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGCGACAGTAAACAAACAGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
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| CDS CAA 72 bp | TTTACTGTCGCCTTCTACCCAGTATGCTGCCTGATCTaGACATGGGCTAAAGAACGTCTTCAGAATTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: FTVAFYPVCCLI*TWAKERLQNSR Trigger: ACGAGAATTCTGAAGACGTTCTTTAGCCCATGTCAAGATCAGGCAGCATACTGGGTAGAAGGCGACAGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110110.9 ENSMUST00000177530.8 |
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