Pregenerated sensors for ZFP160 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067942Ensembl transcript IDs: ENSMUST00000088811.7, ENSMUST00000231482.2, ENSMUST00000232473.2, ENSMUST00000232595.2, ENSMUST00000232663.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGAGGGCGGTCTGTTCAAATGGGCTGAGAGACAGCCACAGGGGTaGGTAGTACCTCTGCTGGTGTTTTCCAACGGCCACGGCCACTCT | + |
|
Preference number: 1 (lower is better) Translates to: VEGGLFKWAERQPQG*VVPLLVFSNGHGHS Trigger: AGAGTGGCCGTGGCCGTTGGAAAACACCAGCAGAGGTACTACCCACCCCTGTGGCTGTCTCTCAGCCCATTTGAACAGACCGCCCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 90 bp | AGGCCTTTCCCCTTTCCCCTGGCTCTCCGCTCGGCCTCCAGACGCTaGATGATCAGCATGGTATCCACATCATCATCTTCCTCTTCGTCA | + |
|
Preference number: 1 (lower is better) Translates to: RPFPFPLALRSASRR*MISMVSTSSSSSSS Trigger: TGACGAAGAGGAAGATGATGATGTGGATACCATGCTGATCATGCAGCGTCTGGAGGCCGAGCGGAGAGCCAGGGGAAAGGGGAAAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 90 bp | AGCCACCTGAACAGACTGGGGTCCTGCCTGGTTGGCACGAGGAGGTaGGAGGGGCAAATCCACTGGAATACCATCAAACTCACTGGTGTA | + |
|
Preference number: 1 (lower is better) Translates to: SHLNRLGSCLVGTRR*EGQIHWNTIKLTGV Trigger: TACACCAGTGAGTTTGATGGTATTCCAGTGGATTTGCCCCTCCCACCTCCTCGTGCCAACCAGGCAGGACCCCAGTCTGTTCAGGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 90 bp | TGCAGCTCGTGGATCTCCTTGCTTAGCATGTCCACAATGTGCATTTaGTGTTGCTTCTCCAGCTTCTCCCTGGCATCTCGTTTCCAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: CSSWISLLSMSTMCI*CCFSSFSLASRFQG Trigger: CCCCTGGAAACGAGATGCCAGGGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 90 bp | TTCCGCAAGCGGTCACTCTCCTCCGCAGTACGGTCCACCTTGTTTTaGAGCTCGTGGATCTCCTTGCTTAGCATGTCCACAATGTGCATT | + |
|
Preference number: 1 (lower is better) Translates to: FRKRSLSSAVRSTLF*SSWISLLSMSTMCI Trigger: AATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGAGAGTGACCGCTTGCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 90 bp | TCATCCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTaGCACTCCAGCATAAGCTTCCGCAAGCGGTCACTCTCCTCCGCA | + |
|
Preference number: 1 (lower is better) Translates to: SSSSFCLDSCSLFWN*HSSISFRKRSLSSA Trigger: TGCGGAGGAGAGTGACCGCTTGCGGAAGCTTATGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 90 bp | GCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCCTaGCATCTCGTTTCCAGGGGTCTGGAGACTATCACCAGAGGACAG | + |
|
Preference number: 1 (lower is better) Translates to: ACPQCAFAVASPASP*HLVSRGLETITRGQ Trigger: CTGTCCTCTGGTGATAGTCTCCAGACCCCTGGAAACGAGATGCCAGGGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 90 bp | CGGTCACTCTCCTCCGCAGTACGGTCCACCTTGTTTTGCAGCTCGTaGATCTCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGC | + |
|
Preference number: 1 (lower is better) Translates to: RSLSSAVRSTLFCSS*ISLLSMSTMCICCC Trigger: GCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGAGAGTGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR TCA 90 bp | TTCCAGGGGTCTGGAGACTATCACCAGAGGACAGCTCCTCTTTACTaGTGGTTATATACTGCAGATCCCTGCGCTCAATCATGCGGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: FQGSGDYHQRTAPLY*WLYTADPCAQSCGA Trigger: AGCCCCGCATGATTGAGCGCAGGGATCTGCAGTATATAACCATCAGTAAAGAGGAGCTGTCCTCTGGTGATAGTCTCCAGACCCCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 90 bp | CCTCCGCAGTACGGTCCACCTTGTTTTGCAGCTCGTGGATCTCCTTaGTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: PPQYGPPCFAARGSP*LACPQCAFAVASPA Trigger: AGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 90 bp | TCGTCATCATCCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTaGAACTGCCACTCCAGCATAAGCTTCCGCAAGCGGTCACTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: SSSSSSFCLDSCSLF*NCHSSISFRKRSLS Trigger: GGAGAGTGACCGCTTGCGGAAGCTTATGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGGATGATGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR TCA 90 bp | TTCAGGTGTTCCTGGCTGGATGTGCTGGATTCCACTGAGGAGCTCTaGTTGATCCACATATCACTGTCACACTTTCGATCCATGCCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: FRCSWLDVLDSTEEL*LIHISLSHFRSMPA Trigger: GGCAGGCATGGATCGAAAGTGTGACAGTGATATGTGGATCAATCAGAGCTCCTCAGTGGAATCCAGCACATCCAGCCAGGAACACCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 90 bp | CTGTTGCTTCTCCAGCTTCTCCCTGGCATCTCGTTTCCAGGGGTCTaGAGACTATCACCAGAGGACAGCTCCTCTTTACTGATGGTTATA | + |
|
Preference number: 1 (lower is better) Translates to: LLLLQLLPGISFPGV*RLSPEDSSSLLMVI Trigger: TATAACCATCAGTAAAGAGGAGCTGTCCTCTGGTGATAGTCTCCAGACCCCTGGAAACGAGATGCCAGGGAGAAGCTGGAGAAGCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR TCA 90 bp | CTGTGTGATGTCCTTGGTGAGTTATCCAGGGTTTGTAAACAACTCTaGCTGTTCTGCTCACAGCAGAGCCATGTGACCATTACACTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: LCDVLGELSRVCKQL*LFCSQQSHVTITLD Trigger: GTCAAGTGTAATGGTCACATGGCTCTGCTGTGAGCAGAACAGTCAGAGTTGTTTACAAACCCTGGATAACTCACCAAGGACATCACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 90 bp | AAGCAATTCACCAGGTATCATTTCTCCATTTTCTTCCTTAGTCCCTaGTTCCAGGTTCCTAGTCTAGCCTTTATCCTGGCTTCTCTTGAT | + |
|
Preference number: 1 (lower is better) Translates to: KQFTRYHFSIFFLSP*FQVPSLAFILASLD Trigger: ATCAAGAGAAGCCAGGATAAAGGCTAGACTAGGAACCTGGAAGCAGGGACTAAGGAAGAAAATGGAGAAATGATACCTGGTGAATTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR GCA 90 bp | AAACACCACATCCCTAATAGCCTACTGTTCTTATTTCACAAAAAGTaGAGTATCCTAATTTTGTGGCAGTTTCTGTATCCAATGATCAGA | + |
|
Preference number: 1 (lower is better) Translates to: KHHIPNSLLFLFHKK*SILILWQFLYPMIR Trigger: TCTGATCATTGGATACAGAAACTGCCACAAAATTAGGATACTGCACTTTTTGTGAAATAAGAACAGTAGGCTATTAGGGATGTGGTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR TCA 90 bp | AGCCACCTGAACAGACTGGGGTCCTGCCTGGTTGGCACGAGGAGGTGGGAGGGGTCCACTGAGGAGCTCTaGTTGATCCACATATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: SHLNRLGSCLVGTRRWEGSTEEL*LIHISL Trigger: CAGTGATATGTGGATCAATCAGAGCTCCTCAGTGGA...CCCCTCCCACCTCCTCGTGCCAACCAGGCAGGACCCCAGTCTGTTCAGGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCTGGAACTGCCACTCCAGCATAAGCTTCCGCAAGCGGTCACTCTCCTCCGGCCACGGCCACTCTTaGTCAGAGTGGAAGCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LFWNCHSSISFRKRSLSSGHGHS*SEWKLR Trigger: CCTCAGCTTCCACTCTGACCAAGAGTGGCCGTGGCC...GGAGGAGAGTGACCGCTTGCGGAAGCTTATGCTGGAGTGGCAGTTCCAGAAGAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTCTGGAACTGCCACTCCAGCATAAGCTTCCGCAAGCGGTCACTCTCCTCCGCTGAAGCTCCCGAATaGCTGTTTCTTGGGGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LFWNCHSSISFRKRSLSSAEAPE*LFLGAS Trigger: AGAGGCCCCAAGAAACAGTCATTCGGGAGCTTCAGC...GGAGGAGAGTGACCGCTTGCGGAAGCTTATGCTGGAGTGGCAGTTCCAGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAGCCCACCAAATCTCAGGGATTTACCATCTGGCCCTGTGCCAACTGTTAGTGCCCTGCGCTCAATCATaGGGGGCTGCTGCTGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: IAHQISGIYHLALCQLLVPCAQS*GAAAGA Trigger: AGCCCCAGCAGCAGCCCCGCATGATTGAGCGCAGGG...CACTAACAGTTGGCACAGGGCCAGATGGTAAATCCCTGAGATTTGGTGGGCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGTTGGCACGAGGAGGTGGGAGGGGCAAATCCACTGGAATACCATCAAACTAGACAGCCACAGGGGTaGGTAGTACCTCTGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: PGWHEEVGGANPLEYHQTRQPQG*VVPLLV Trigger: CACCAGCAGAGGTACTACCCACCCCTGTGGCTGTCT...AGTTTGATGGTATTCCAGTGGATTTGCCCCTCCCACCTCCTCGTGCCAACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCTCTGCAGCAGCCACCTaGACAGACTGGGGTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLLSMSTMCICCCFSSFSSAAAT*TDWGPA Trigger: GGCAGGACCCCAGTCTGTTCAGGTGGCTGCTGCAGA...GGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | TCACCAGAGGACAGCTCCTCTTTACTGATGGTTATATACTGCAGATCCCTGCGCGGCTGCTGCTGGGGCTaGAGCTCCCGAATGACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SPEDSSSLLMVIYCRSLRGCCWG*SSRMTV Trigger: AACAGTCATTCGGGAGCTTCAGCCCCAGCAGCAGCC...GCGCAGGGATCTGCAGTATATAACCATCAGTAAAGAGGAGCTGTCCTCTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTTCTGGCTTGGCCTATGTGGCCAAAGGTGAGAAGGAAGCAGGGTTCAGGTCAGGTGTTCCTGGCTaGATGTGCTGGATTCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: GFSGLAYVAKGEKEAGFRSGVPG*MCWIPL Trigger: CAGTGGAATCCAGCACATCCAGCCAGGAACACCTGA...CCTGAACCCTGCTTCCTTCTCACCTTTGGCCACATAGGCCAAGCCAGAAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACCAGAGGACAGCTCCTCTTTACTGATGGTTATATACTGCAGATCCCTGCGCGGCCACGGCCACTCTTaGTCAGAGTGGAAGCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPEDSSSLLMVIYCRSLRGHGHS*SEWKLR Trigger: CCTCAGCTTCCACTCTGACCAAGAGTGGCCGTGGCC...GCGCAGGGATCTGCAGTATATAACCATCAGTAAAGAGGAGCTGTCCTCTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CAA 90 bp | GTGGGTAGTACCTCTGCTGGTGTTTTCCAACGGCCACGGCCACTCTaGGTCAGAGTGGAAGCTGAGGTAACTGACTTGGAAGAATGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VGSTSAGVFQRPRPL*VRVEAEVTDLEEWF Trigger: GAACCATTCTTCCAAGTCAGTTACCTCAGCTTCCACTCTGACCAAGAGTGGCCGTGGCCGTTGGAAAACACCAGCAGAGGTACTACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CAA 90 bp | ATAAGCTTCCGCAAGCGGTCACTCTCCTCCGCAGTACGGTCCACCTaGTTTTGCAGCTCGTGGATCTCCTTGCTTAGCATGTCCACAATG | + |
|
Preference number: 2 (lower is better) Translates to: ISFRKRSLSSAVRST*FCSSWISLLSMSTM Trigger: CATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGAGAGTGACCGCTTGCGGAAGCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGTTGGCACGAGGAGGTGGGAGGGGCAAATCCACTGGAATACCATCAAACTCACACTTTCGATCCATaGCTGCCTCTACTCGATACC | + |
|
Preference number: 2 (lower is better) Translates to: PGWHEEVGGANPLEYHQTHTFDP*LPLLDT Trigger: GGTATCGAGTAGAGGCAGGCATGGATCGAAAGTGTG...AGTTTGATGGTATTCCAGTGGATTTGCCCCTCCCACCTCCTCGTGCCAACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCAGCTTCTCCCTGGCATCTCGTTTCCAGGGGTCTGGAGACTATCACCAGATGTGGAAGGCTTTTCTaGCTTGGCCTATGTGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SPASPWHLVSRGLETITRCGRLF*LGLCGQ Trigger: TTGGCCACATAGGCCAAGCCAGAAAAGCCTTCCACA...TCTGGTGATAGTCTCCAGACCCCTGGAAACGAGATGCCAGGGAGAAGCTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCCCACCAAATCTCAGGGATTTACCATCTGGCCCTGTGCCAACTGTTAGTGGGGGCCTCTGCAGTGTaGAAGGCTTTTCTGGCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: IAHQISGIYHLALCQLLVGASAV*KAFLAW Trigger: CCAAGCCAGAAAAGCCTTCCACACTGCAGAGGCCCC...CACTAACAGTTGGCACAGGGCCAGATGGTAAATCCCTGAGATTTGGTGGGCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CAA 90 bp | TCCTCCGCAGTACGGTCCACCTTGTTTTGCAGCTCGTGGATCTCCTaGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSAVRSTLFCSSWIS*LSMSTMCICCCFSS Trigger: GCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCTCCAACTCCCTCTCCTaGTCCCTGCGCTTCCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSMSTMCICCCFSSFSSNSLS*SLRFLS Trigger: AGAGAGGAAGCGCAGGGAGCAGGAGAGGGAGTTGGA...GGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAGCCCACCAAATCTCAGGGATTTACCATCTGGCCCTGTGCCAACTGTTAGTGTCGGCCTCCAGACGCTaGATGATCAGCATGGTATCC | + |
|
Preference number: 2 (lower is better) Translates to: IAHQISGIYHLALCQLLVSASRR*MISMVS Trigger: GGATACCATGCTGATCATGCAGCGTCTGGAGGCCGA...CACTAACAGTTGGCACAGGGCCAGATGGTAAATCCCTGAGATTTGGTGGGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGCCCACCAAATCTCAGGGATTTACCATCTGGCCCTGTGCCAACTGTTAGTGCCTCCAGACGCTGCATaGTCAGCATGGTATCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: IAHQISGIYHLALCQLLVPPDAA*SAWYPH Trigger: ATGTGGATACCATGCTGATCATGCAGCGTCTGGAGG...CACTAACAGTTGGCACAGGGCCAGATGGTAAATCCCTGAGATTTGGTGGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCCCTGGCTGGATGTGCTaGATTCCACTGAGGAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSMSTMCICCCFSSFSPGWMC*IPLRSS Trigger: AGAGCTCCTCAGTGGAATCCAGCACATCCAGCCAGG...GGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATCAGGACCCAAAGCTTTCTGTGTGATGTCCTTGGTGAGTTATCCAGGGTTTAGACAGCCACAGGGGTaGGTAGTACCTCTGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ESGPKAFCVMSLVSYPGFRQPQG*VVPLLV Trigger: CACCAGCAGAGGTACTACCCACCCCTGTGGCTGTCT...AAACCCTGGATAACTCACCAAGGACATCACACAGAAAGCTTTGGGTCCTGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | TCGTCATCATCCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCTCTCCAGCTTCTCCCTaGCATCTCGTTTCCAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSSSSSFCLDSCSLFWNCSPASP*HLVSRG Trigger: ACCCCTGGAAACGAGATGCCAGGGAGAAGCTGGAGA...GCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGGATGATGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACGCTGCATGATCAGCATGGTATCCACATCATCATCTTCCTCTTCGTCATCATCTGTTCAAATGGGCTaGGAGACAGCCACAGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RRCMISMVSTSSSSSSSSSVQMG*ETATGV Trigger: CACCCCTGTGGCTGTCTCTCAGCCCATTTGAACAGA...TGATGACGAAGAGGAAGATGATGATGTGGATACCATGCTGATCATGCAGCGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | TCGTCATCATCCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCCACACTTTCGATCCATaGCTGCCTCTACTCGATACC | + |
|
Preference number: 2 (lower is better) Translates to: SSSSSSFCLDSCSLFWNCHTFDP*LPLLDT Trigger: GGTATCGAGTAGAGGCAGGCATGGATCGAAAGTGTG...GCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGGATGATGACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAGCCCACCAAATCTCAGGGATTTACCATCTGGCCCTGTGCCAACTGTTAGTGTCATACCACCTCTGGTaGTCCTCTCTCTTTTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: IAHQISGIYHLALCQLLVSYHLW*SSLFFC Trigger: GCAGAAAAAGAGAGAGGAGCACCAGAGGTGGTATGA...CACTAACAGTTGGCACAGGGCCAGATGGTAAATCCCTGAGATTTGGTGGGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCCACTCCAGCAGAGGGGCAAATCCACTaGAATACCATCAAACTCACT | + |
|
Preference number: 2 (lower is better) Translates to: PHPSVWTPVVSSGTATPAEGQIH*NTIKLT Trigger: AGTGAGTTTGATGGTATTCCAGTGGATTTGCCCCTC...TGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCCACTCCAGCATTCTCATACCACCTCTaGTGCTCCTCTCTCTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PHPSVWTPVVSSGTATPAFSYHL*CSSLFF Trigger: GAAAAAGAGAGAGGAGCACCAGAGGTGGTATGAGAA...TGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCTGTGGAAGGCTTTTCTaGCTTGGCCTATGTGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLLSMSTMCICCCFSSFSCGRLF*LGLCGQ Trigger: TTGGCCACATAGGCCAAGCCAGAAAAGCCTTCCACA...GGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGAGGACATAGACCACTTTGGGCAGTGCCACCCCTTGGAACATGGTCCTAGGGTGGAAATCATATCCTaGAGCATCTTCTCTACATGT | + |
|
Preference number: 2 (lower is better) Translates to: YEDIDHFGQCHPLEHGPRVEIIS*SIFSTC Trigger: ACATGTAGAGAAGATGCTTCAGGATATGATTTCCAC...CCTAGGACCATGTTCCAAGGGGTGGCACTGCCCAAAGTGGTCTATGTCCTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGTACCTGTTTTTGCAACTTAAGTGTAGCAAGGATAACTATATGGCTGCTATCTGCAGCAGCCACCTaGACAGACTGGGGTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LSTCFCNLSVARITIWLLSAAAT*TDWGPA Trigger: GGCAGGACCCCAGTCTGTTCAGGTGGCTGCTGCAGA...TAGCAGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAGGCTTACTCAGATGTTATGGTCACTCTGGGCTACACAGTGAGTTTCAGATTCTCACTGAGCCCTTaGACTTGCCATTACACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QEAYSDVMVTLGYTVSFRFSLSP*TCHYTV Trigger: CACTGTGTAATGGCAAGTGCAAGGGCTCAGTGAGAA...TCTGAAACTCACTGTGTAGCCCAGAGTGACCATAACATCTGAGTAAGCCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTTCACATTCATCAGGTTGGACTCTGGCCATTTCTGTCAAGTATTTTCTTGGACATAGACCACTTTaGGCAGTGCCACCCCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: DPSHSSGWTLAISVKYFLGHRPL*AVPPLG Trigger: TCCAAGGGGTGGCACTGCCCAAAGTGGTCTATGTCC...AAGAAAATACTTGACAGAAATGGCCAGAGTCCAACCTGATGAATGTGAAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCACTGACTTGGAAGAATaGTTCAGGTGTTCCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLLSMSTMCICCCFSSFSTDLEE*FRCSWL Trigger: CAGCCAGGAACACCTGAACCATTCTTCCAAGTCAGT...GGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCTCATTCCTGCAAGTTGTCAGCCAAGAGTGAGCAGAAGAAATCAGGGAGGGTGAATATAGCTGTCTaGATAGAAACACCCAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LAHSCKLSAKSEQKKSGRVNIAV*IETPRR Trigger: TCTTCTGGGTGTTTCTATGCAGACAGCTATATTCAC...CCTCCCTGATTTCTTCTGCTCACTCTTGGCTGACAACTTGCAGGAATGAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTGGAAGGCTGAGGCAGGAGGCTTACTCAGATGTTATGGTCACTCTGGGCTACCACATGAGGGTGAATaGCTAAATTTTTGTACCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TWKAEAGGLLRCYGHSGLPHEGE*LNFCTC Trigger: ACAGGTACAAAAATTTAGCCATTCACCCTCATGTGG...TAGCCCAGAGTGACCATAACATCTGAGTAAGCCTCCTGCCTCAGCCTTCCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGCTTACTCAGATGTTATGGTCACTCTGGGCTACACAGTGAGTTTCAGATCCCAGACAAAATTACCTaGCACCACATGAGGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: GGLLRCYGHSGLHSEFQIPDKIT*HHMRVN Trigger: ATTCACCCTCATGTGGTGCCAGGTAATTTTGTCTGG...GATCTGAAACTCACTGTGTAGCCCAGAGTGACCATAACATCTGAGTAAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAAATTGATGTCCTAAAGTCCTCTGCTCATCATGAGAATCAGGACCCAAAGGGGGCCTCTGCAGTGTaGAAGGCTTTTCTGGCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FKIDVLKSSAHHENQDPKGASAV*KAFLAW Trigger: CCAAGCCAGAAAAGCCTTCCACACTGCAGAGGCCCC...CTTTGGGTCCTGATTCTCATGATGAGCAGAGGACTTTAGGACATCAATTTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAAATTGATGTCCTAAAGTCCTCTGCTCATCATGAGAATCAGGACCCAAAGGCTGAAGCTCCCGAATaGCTGTTTCTTGGGGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FKIDVLKSSAHHENQDPKAEAPE*LFLGAS Trigger: AGAGGCCCCAAGAAACAGTCATTCGGGAGCTTCAGC...CTTTGGGTCCTGATTCTCATGATGAGCAGAGGACTTTAGGACATCAATTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCACTAAGTCTTCTGCAGTTTATTTGACAAACACCACATCCCTAATAGCCGACCACTTTGGGCAGTaGCACCCCTTGGAACATGGT | + |
|
Preference number: 2 (lower is better) Translates to: KFTKSSAVYLTNTTSLIADHFGQ*HPLEHG Trigger: ACCATGTTCCAAGGGGTGGCACTGCCCAAAGTGGTC...GGCTATTAGGGATGTGGTGTTTGTCAAATAAACTGCAGAAGACTTAGTGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR TCA 90 bp | TCGTCATCATCCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCACAGCTCCTCTTTACTaGTGGTTATATACTGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SSSSSSFCLDSCSLFWNCTAPLY*WLYTAD Trigger: ATCTGCAGTATATAACCATCAGTAAAGAGGAGCTGT...GCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGGATGATGACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATTAAAACCAGACAAAATTACCTGGCACCACATGAGGGTGAATGGCTAAATCTTGCCATTACACAGTaGGGTAGCATCTACTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: KIKTRQNYLAPHEGEWLNLAITQ*GSIYSA Trigger: GGCAGAGTAGATGCTACCTCACTGTGTAATGGCAAG...ATTTAGCCATTCACCCTCATGTGGTGCCAGGTAATTTTGTCTGGTTTTAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAAATTGATGTCCTAAAGTCCTCTGCTCATCATGAGAATCAGGACCCAAAGAAGGCTTTTCTGGCTTaGCCTATGTGGCCAAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: FKIDVLKSSAHHENQDPKKAFLA*PMWPKV Trigger: CACCTTTGGCCACATAGGCCAAGCCAGAAAAGCCTT...CTTTGGGTCCTGATTCTCATGATGAGCAGAGGACTTTAGGACATCAATTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGGGTCTTTAAACTCCTCTTTGTGATTGTGAATATAGCTGTCTGCATAGAATCCTGTAGTCTCTTCTaGAACTGCCACTCCAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: GGVFKLLFVIVNIAVCIESCSLF*NCHSSI Trigger: TATGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGA...TTCTATGCAGACAGCTATATTCACAATCACAAAGAGGAGTTTAAAGACCCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCACTAAGTCTTCTGCAGTTTATTTGACAAACACCACATCCCTAATAGCCATGCCAAGCAGACAATaGTCCCACAACACCCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KFTKSSAVYLTNTTSLIAMPSRQ*SHNTLK Trigger: TTTCAGGGTGTTGTGGGAGCATTGTCTGCTTGGCAT...GGCTATTAGGGATGTGGTGTTTGTCAAATAAACTGCAGAAGACTTAGTGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR TCA 90 bp | TTACTAAGTACCTGTTTTTGCAACTTAAGTGTAGCAAGGATAACTATATGGCTGTGTGCTGGATTCCACTaGGGAGCTCTGATTGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: LLSTCFCNLSVARITIWLCAGFH*GALIDP Trigger: TGGATCAATCAGAGCTCCTCAGTGGAATCCAGCACA...CAGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCCTTCACATTCATCAGGTTGGACTCTGGCCATTTCTGTCAAGTATTTTCTTACATATTTGAACTCATaGTGGGTGTTTATCGTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: DPSHSSGWTLAISVKYFLTYLNS*WVFIVN Trigger: GTTGACGATAAACACCCATCATGAGTTCAAATATGT...AAGAAAATACTTGACAGAAATGGCCAGAGTCCAACCTGATGAATGTGAAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR GCA 90 bp | TTACTAAGTACCTGTTTTTGCAACTTAAGTGTAGCAAGGATAACTATATGGCTGTCATACCACCTCTGGTaGTCCTCTCTCTTTTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLSTCFCNLSVARITIWLSYHLW*SSLFFC Trigger: GCAGAAAAAGAGAGAGGAGCACCAGAGGTGGTATGA...CAGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGTACCTGTTTTTGCAACTTAAGTGTAGCAAGGATAACTATATGGCTGCTATCCACAATGTGCATTTaGTGTTGCTTCTCCAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSTCFCNLSVARITIWLLSTMCI*CCFSSF Trigger: GAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGA...TAGCAGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACTAAGTACCTGTTTTTGCAACTTAAGTGTAGCAAGGATAACTATATGGCTGTCCTGTAGTCTCTTCTaGAACTGCCACTCCAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: LLSTCFCNLSVARITIWLSCSLF*NCHSSI Trigger: TATGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGA...CAGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCAACAATGTGCATTTTTGGGTTTATAGAGGTGGAAATCATATCCTGAAGCATAAGGGTGGTTGTACATaGATACCACTACATCTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: INNVHFWVYRGGNHILKHKGGCT*IPLHLV Trigger: CACTAGATGTAGTGGTATGCATGTACAACCACCCTT...ATGCTTCAGGATATGATTTCCACCTCTATAAACCCAAAAATGCACATTGTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR CAA 90 bp | ACCTGTTGTTACTCAAAGAAGTTCACTAAGTCTTCTGCAGTTTATTaGACAAACACCACATCCCTAATAGCCTACTGTTCTTATTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: TCCYSKKFTKSSAVY*TNTTSLIAYCSYFT Trigger: TGTGAAATAAGAACAGTAGGCTATTAGGGATGTGGTGTTTGTCAAATAAACTGCAGAAGACTTAGTGAACTTCTTTGAGTAACAACAGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCTAATATGAAACCTGTTGTTACTCAAAGAAGTTCACTAAGTCTTCTGCAGGCAAGAAGTGAATTATaGCCAAAGACCTTGCTATAT | + |
|
Preference number: 2 (lower is better) Translates to: FPNMKPVVTQRSSLSLLQARSEL*PKTLLY Trigger: ATATAGCAAGGTCTTTGGGCATAATTCACTTCTTGC...CTGCAGAAGACTTAGTGAACTTCTTTGAGTAACAACAGGTTTCATATTAGGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR TCA 72 bp | GGAGGTGGTGGTGGAGGGCGGTCTGTTCAAATGGGCTaGGAGACAGCCACAGGGGTGGGTAGTACCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GGGGGGRSVQMG*ETATGVGSTSA Trigger: AGCAGAGGTACTACCCACCCCTGTGGCTGTCTCTCAGCCCATTTGAACAGACCGCCCTCCACCACCACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 72 bp | CCCTTTCCCCTGGCTCTCCGCTCGGCCTCCAGACGCTaGATGATCAGCATGGTATCCACATCATCATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PFPLALRSASRR*MISMVSTSSSS Trigger: GGAAGATGATGATGTGGATACCATGCTGATCATGCAGCGTCTGGAGGCCGAGCGGAGAGCCAGGGGAAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCTGGGGTCCTGCCTGGTaGGCACGAGGAGGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLSMSTMCICCCFSSFSWGPAW*ARGGGR Trigger: CCTCCCACCTCCTCGTGCCAACCAGGCAGGACCCCA...GGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 72 bp | AACAGACTGGGGTCCTGCCTGGTTGGCACGAGGAGGTaGGAGGGGCAAATCCACTGGAATACCATCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: NRLGSCLVGTRR*EGQIHWNTIKL Trigger: GAGTTTGATGGTATTCCAGTGGATTTGCCCCTCCCACCTCCTCGTGCCAACCAGGCAGGACCCCAGTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR TCA 72 bp | TTCCCCTGGCTCTCCGCTCGGCCTCCAGACGCTGCATaGTCAGCATGGTATCCACATCATCATCTTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FPWLSARPPDAA*SAWYPHHHLPL Trigger: AAGAGGAAGATGATGATGTGGATACCATGCTGATCATGCAGCGTCTGGAGGCCGAGCGGAGAGCCAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 72 bp | CGGTCACTCTCCTCCGCAGTACGGTCCACCTTGTTTTaGAGCTCGTGGATCTCCTTGCTTAGCATGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RSLSSAVRSTLF*SSWISLLSMST Trigger: TGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGAGAGTGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 72 bp | CTCCAGCTTCTCCCTGGCATCTCGTTTCCAGGGGTCTaGAGACTATCACCAGAGGACAGCTCCTCTTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LQLLPGISFPGV*RLSPEDSSSLL Trigger: CAGTAAAGAGGAGCTGTCCTCTGGTGATAGTCTCCAGACCCCTGGAAACGAGATGCCAGGGAGAAGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCATCATCCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCCGGCCACGGCCACTCTaGGTCAGAGTGGAAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSSSSFCLDSCSLFWNCRPRPL*VRVEAE Trigger: CTCAGCTTCCACTCTGACCAAGAGTGGCCGTGGCCG...GCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGGATGATGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 72 bp | CCAGAGGACAGCTCCTCTTTACTGATGGTTATATACTaGAGATCCCTGCGCTCAATCATGCGGGGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PEDSSSLLMVIY*RSLRSIMRGCC Trigger: GCAGCAGCCCCGCATGATTGAGCGCAGGGATCTGCAGTATATAACCATCAGTAAAGAGGAGCTGTCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 72 bp | TCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTaGCACTCCAGCATAAGCTTCCGCAAGCGGTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SFCLDSCSLFWN*HSSISFRKRSL Trigger: GAGTGACCGCTTGCGGAAGCTTATGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTTCTGGCTTGGCCTATGTGGCCAAAGGTGAGAAGGAAGCAGGGTTCAGGGCTGAGGTAACTGACTaGGAAGAATGGTTCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GFSGLAYVAKGEKEAGFRAEVTD*EEWFRC Trigger: ACACCTGAACCATTCTTCCAAGTCAGTTACCTCAGC...CCTGAACCCTGCTTCCTTCTCACCTTTGGCCACATAGGCCAAGCCAGAAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTCATTCCTGCAAGTTGTCAGCCAAGAGTGAGCAGAAGAAATCAGGGAGGAGCTCGTGGATCTCCTaGCTTAGCATGTCCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: LAHSCKLSAKSEQKKSGRSSWIS*LSMSTM Trigger: CATTGTGGACATGCTAAGCAAGGAGATCCACGAGCT...CCTCCCTGATTTCTTCTGCTCACTCTTGGCTGACAACTTGCAGGAATGAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 72 bp | TCCTCCGCAGTACGGTCCACCTTGTTTTGCAGCTCGTaGATCTCCTTGCTTAGCATGTCCACAATGTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: SSAVRSTLFCSS*ISLLSMSTMCI Trigger: AATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGGAAGGCTGAGGCAGGAGGCTTACTCAGATGTTATGGTCACTCTGGGCTATTTCTCACTGAGCCCTaGCACTTGCCATTACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TWKAEAGGLLRCYGHSGLFLTEP*HLPLHS Trigger: ACTGTGTAATGGCAAGTGCAAGGGCTCAGTGAGAAA...TAGCCCAGAGTGACCATAACATCTGAGTAAGCCTCCTGCCTCAGCCTTCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCCACTCCAGCAGCTGAGGTAACTGACTaGGAAGAATGGTTCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PHPSVWTPVVSSGTATPAAEVTD*EEWFRC Trigger: ACACCTGAACCATTCTTCCAAGTCAGTTACCTCAGC...TGCTGGAGTGGCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCATCATCCTCATCCTTCTGTTTGGACTCCTGTAGTCTCTTCTGGAACTGCGAAGGCTTTTCTGGCTaGGCCTATGTGGCCAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSSSSSFCLDSCSLFWNCEGFSG*AYVAKG Trigger: ACCTTTGGCCACATAGGCCAAGCCAGAAAAGCCTTC...GCAGTTCCAGAAGAGACTACAGGAGTCCAAACAGAAGGATGAGGATGATGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR TCA 72 bp | TCCTGGCTGGATGTGCTGGATTCCACTGAGGAGCTCTaGTTGATCCACATATCACTGTCACACTTTCGATCC | + |
|
Preference number: 3 (lower is better) Translates to: SWLDVLDSTEEL*LIHISLSHFRS Trigger: GGATCGAAAGTGTGACAGTGATATGTGGATCAATCAGAGCTCCTCAGTGGAATCCAGCACATCCAGCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 72 bp | TGGATCTCCTTGCTTAGCATGTCCACAATGTGCATTTaGTGTTGCTTCTCCAGCTTCTCCCTGGCATCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: WISLLSMSTMCI*CCFSSFSLASR Trigger: ACGAGATGCCAGGGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGAGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATCAGGACCCAAAGCTTTCTGTGTGATGTCCTTGGTGAGTTATCCAGGGTTTGAAGGCTTTTCTGGCTaGGCCTATGTGGCCAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESGPKAFCVMSLVSYPGFEGFSG*AYVAKG Trigger: ACCTTTGGCCACATAGGCCAAGCCAGAAAAGCCTTC...AAACCCTGGATAACTCACCAAGGACATCACACAGAAAGCTTTGGGTCCTGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR GCA 72 bp | TACGGTCCACCTTGTTTTGCAGCTCGTGGATCTCCTTaGTTAGCATGTCCACAATGTGCATTTGCTGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YGPPCFAARGSP*LACPQCAFAVA Trigger: AGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR TCA 72 bp | TCTGGAGACTATCACCAGAGGACAGCTCCTCTTTACTaGTGGTTATATACTGCAGATCCCTGCGCTCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SGDYHQRTAPLY*WLYTADPCAQS Trigger: TGATTGAGCGCAGGGATCTGCAGTATATAACCATCAGTAAAGAGGAGCTGTCCTCTGGTGATAGTCTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR TCA 72 bp | GTCCTTGGTGAGTTATCCAGGGTTTGTAAACAACTCTaGCTGTTCTGCTCACAGCAGAGCCATGTGACCATT | + |
|
Preference number: 3 (lower is better) Translates to: VLGELSRVCKQL*LFCSQQSHVTI Trigger: AATGGTCACATGGCTCTGCTGTGAGCAGAACAGTCAGAGTTGTTTACAAACCCTGGATAACTCACCAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCATTTTCTTCCTTAGTCCCTGCTTCCAGGTTCCTAGTCTAGCCTTTATCCTGCCCCTGAGGCAGGTATaGTATCATCAGAAAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SIFFLSPCFQVPSLAFILPLRQV*YHQKVS Trigger: TGAAACTTTCTGATGATACAATACCTGCCTCAGGGG...CAGGATAAAGGCTAGACTAGGAACCTGGAAGCAGGGACTAAGGAAGAAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR GCA 72 bp | ACCAGGTATCATTTCTCCATTTTCTTCCTTAGTCCCTaGTTCCAGGTTCCTAGTCTAGCCTTTATCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TRYHFSIFFLSP*FQVPSLAFILA Trigger: AGCCAGGATAAAGGCTAGACTAGGAACCTGGAAGCAGGGACTAAGGAAGAAAATGGAGAAATGATACCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR GCA 72 bp | ATGCTCCCACAACACCCTGAAAAGGGTGGTTGTACATaGATACCACTACATCTAGTGACATATTTGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: MLPQHPEKGGCT*IPLHLVTYLNS Trigger: TGAGTTCAAATATGTCACTAGATGTAGTGGTATGCATGTACAACCACCCTTTTCAGGGTGTTGTGGGAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAATTGATGTCCTAAAGTCCTCTGCTCATCATGAGAATCAGGACCCAAAGAATGTGCATTTGCTGTaGCTTCTCCAGCTTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FKIDVLKSSAHHENQDPKNVHLL*LLQLLP Trigger: AGGGAGAAGCTGGAGAAGCAACAGCAAATGCACATT...CTTTGGGTCCTGATTCTCATGATGAGCAGAGGACTTTAGGACATCAATTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAATTGATGTCCTAAAGTCCTCTGCTCATCATGAGAATCAGGACCCAAAGGTCCACAATGTGCATTaGCTGTTGCTTCTCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FKIDVLKSSAHHENQDPKVHNVH*LLLLQL Trigger: AAGCTGGAGAAGCAACAGCAAATGCACATTGTGGAC...CTTTGGGTCCTGATTCTCATGATGAGCAGAGGACTTTAGGACATCAATTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACTAAGTACCTGTTTTTGCAACTTAAGTGTAGCAAGGATAACTATATGGCTGGCTCATTCCTGCAAGTaGTCAGCCAAGAGTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLSTCFCNLSVARITIWLAHSCK*SAKSEQ Trigger: CTGCTCACTCTTGGCTGACAACTTGCAGGAATGAGC...CAGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CCA 72 bp | TTTCCTGAGAAGAGAGACCCTTCACATTCATCAGGTTaGACTCTGGCCATTTCTGTCAAGTATTTTCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FPEKRDPSHSSG*TLAISVKYFLY Trigger: ATAAAGAAAATACTTGACAGAAATGGCCAGAGTCCAACCTGATGAATGTGAAGGGTCTCTCTTCTCAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR TCA 72 bp | TGCATACCACTACATCTAGTGACATATTTGAACTCATaGTGGGTGTTTATCGTCAACACAATACTAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: CIPLHLVTYLNS*WVFIVNTILTF Trigger: AAATGTTAGTATTGTGTTGACGATAAACACCCATCATGAGTTCAAATATGTCACTAGATGTAGTGGTATGCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| CDS-3UTR GCA 90 bp | AGCCACCTGAACAGACTGGGGTCCTGCCTGGTTGGCACGAGGAGGTGGGAGGGGTTTTCTGGTTCTTATTaGCTCACTCTCCACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLNRLGSCLVGTRRWEGFSGSY*LTLHSP Trigger: TGGACTGTGGAGAGTGAGGCAATAAGAACCAGAAAA...CCCCTCCCACCTCCTCGTGCCAACCAGGCAGGACCCCAGTCTGTTCAGGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CAA 72 bp | CGCAAGCGGTCACTCTCCTCCGCAGTACGGTCCACCTaGTTTTGCAGCTCGTGGATCTCCTTGCTTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKRSLSSAVRST*FCSSWISLLSM Trigger: CATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGAGAGTGACCGCTTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| 3UTR CAA 72 bp | ACCTCTGCTGGTGTTTTCCAACGGCCACGGCCACTCTaGGTCAGAGTGGAAGCTGAGGTAACTGACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSAGVFQRPRPL*VRVEAEVTDLE Trigger: TTCCAAGTCAGTTACCTCAGCTTCCACTCTGACCAAGAGTGGCCGTGGCCGTTGGAAAACACCAGCAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| CDS-3UTR TCA 90 bp | GCACTTGGAAGGCTGAGGCAGGAGGCTTACTCAGATGTTATGGTCACTCTGGGCGGCTACATCACTGAATaGCAACTGTCCCTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALGRLRQEAYSDVMVTLGGYITE*QLSLSD Trigger: GTCACTCAGGGACAGTTGTCATTCAGTGATGTAGCC...GCCCAGAGTGACCATAACATCTGAGTAAGCCTCCTGCCTCAGCCTTCCAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACATATCACTGTCACACTTTCGATCCATGCCTGCCTCTACTCGATACCGCTCCCGAAGCTCTTCCTaGGAATGGGTAACACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHISLSHFRSMPASTRYRSRSSS*EWVTRC Trigger: GCAGCGTGTTACCCATTCCCAGGAAGAGCTTCGGGA...GCGGTATCGAGTAGAGGCAGGCATGGATCGAAAGTGTGACAGTGATATGTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 ENSMUST00000232663.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTGGAACTGCCACTCCAGCATAAGCTTCCGCAAGCGGTCACTCTCCTCCTTTTCTGGTTCTTATTaGCTCACTCTCCACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFWNCHSSISFRKRSLSSFSGSY*LTLHSP Trigger: TGGACTGTGGAGAGTGAGGCAATAAGAACCAGAAAA...GGAGGAGAGTGACCGCTTGCGGAAGCTTATGCTGGAGTGGCAGTTCCAGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| CDS-3UTR CCA 90 bp | GTACGGTCCACCTTGTTTTGCAGCTCGTGGATCTCCTTGCTTAGCATGTCCACAAGCTCTTCCTGGGAATaGGTAACACGCTGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRSTLFCSSWISLLSMSTSSSWE*VTRCTH Trigger: ATGAGTGCAGCGTGTTACCCATTCCCAGGAAGAGCT...TGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTGCTTAGCATGTCCACAATGTGCATTTGCTGTTGCTTCTCCAGCTTCTCCTCCCGAAGCTCTTCCTaGGAATGGGTAACACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSMSTMCICCCFSSFSSRSSS*EWVTRC Trigger: GCAGCGTGTTACCCATTCCCAGGAAGAGCTTCGGGA...GGAGAAGCTGGAGAAGCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| CDS-3UTR CCA 90 bp | GATCCACATATCACTGTCACACTTTCGATCCATGCCTGCCTCTACTCGATACCGAGCTCTTCCTGGGAATaGGTAACACGCTGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DPHITVTLSIHACLYSIPSSSWE*VTRCTH Trigger: ATGAGTGCAGCGTGTTACCCATTCCCAGGAAGAGCT...CGGTATCGAGTAGAGGCAGGCATGGATCGAAAGTGTGACAGTGATATGTGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 ENSMUST00000232663.2 |
||
| 3UTR CAA 72 bp | GTACGGTCCACCTTGTTTTGCAGCTCGTGGATCTCCTaGCTTAGCATGTCCACAATGTGCATTTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRSTLFCSSWIS*LSMSTMCICCC Trigger: GCAACAGCAAATGCACATTGTGGACATGCTAAGCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| CDS-3UTR TCA 90 bp | CTGATTGATCCACATATCACTGTCACACTTTCGATCCATGCCTGCCTCTACTCGGGCTACATCACTGAATaGCAACTGTCCCTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LIDPHITVTLSIHACLYSGYITE*QLSLSD Trigger: GTCACTCAGGGACAGTTGTCATTCAGTGATGTAGCC...CGAGTAGAGGCAGGCATGGATCGAAAGTGTGACAGTGATATGTGGATCAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232663.2 |
||
| 3UTR CAA 72 bp | ATAGTGGCAGACTTATTTCTCACTGAGCCCTTGCACTaGCCATTACACAGTGAGGTAGCATCTACTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVADLFLTEPLH*PLHSEVASTLP Trigger: GGGCAGAGTAGATGCTACCTCACTGTGTAATGGCAAGTGCAAGGGCTCAGTGAGAAATAAGTCTGCCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| CDS-3UTR CCA 90 bp | ATTGATCCACATATCACTGTCACACTTTCGATCCATGCCTGCCTCTACTCGATAAGCTCTTCCTGGGAATaGGTAACACGCTGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDPHITVTLSIHACLYSISSSWE*VTRCTH Trigger: ATGAGTGCAGCGTGTTACCCATTCCCAGGAAGAGCT...TATCGAGTAGAGGCAGGCATGGATCGAAAGTGTGACAGTGATATGTGGATCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 ENSMUST00000232663.2 |
||
| CDS-3UTR GCA 90 bp | TTGATCCACATATCACTGTCACACTTTCGATCCATGCCTGCCTCTACTCGATACTTTTCTGGTTCTTATTaGCTCACTCTCCACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIHISLSHFRSMPASTRYFSGSY*LTLHSP Trigger: TGGACTGTGGAGAGTGAGGCAATAAGAACCAGAAAA...GTATCGAGTAGAGGCAGGCATGGATCGAAAGTGTGACAGTGATATGTGGATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 ENSMUST00000232663.2 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTCACTGAGCCCTTGCACTTGCCATTACACAGTGAGGTAGCATCTACTTTTTCTGGTTCTTATTaGCTCACTCTCCACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLTEPLHLPLHSEVASTFSGSY*LTLHSP Trigger: TGGACTGTGGAGAGTGAGGCAATAAGAACCAGAAAA...AGTAGATGCTACCTCACTGTGTAATGGCAAGTGCAAGGGCTCAGTGAGAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| CDS-3UTR GCA 90 bp | GACCCTTCACATTCATCAGGTTGGACTCTGGCCATTTCTGTCAAGTATTTTCTTTTTTCTGGTTCTTATTaGCTCACTCTCCACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPSHSSGWTLAISVKYFLFSGSY*LTLHSP Trigger: TGGACTGTGGAGAGTGAGGCAATAAGAACCAGAAAA...AAGAAAATACTTGACAGAAATGGCCAGAGTCCAACCTGATGAATGTGAAGGGTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| CDS-3UTR TCA 90 bp | ATCAACAATGTGCATTTTTGGGTTTATAGAGGTGGAAATCATATCCTGAAGCATGGCTACATCACTGAATaGCAACTGTCCCTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: INNVHFWVYRGGNHILKHGYITE*QLSLSD Trigger: GTCACTCAGGGACAGTTGTCATTCAGTGATGTAGCC...ATGCTTCAGGATATGATTTCCACCTCTATAAACCCAAAAATGCACATTGTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACTAAGTCTTCTGCAGTTTATTTGACAAACACCACATCCCTAATAGCCTTCATGAACAACAGGTaGTTTGTCACCACTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KFTKSSAVYLTNTTSLIAFMNNR*FVTTSK Trigger: CTTGCTAGTGGTGACAAAGCACCTGTTGTTCATGAA...GGCTATTAGGGATGTGGTGTTTGTCAAATAAACTGCAGAAGACTTAGTGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR CAA 72 bp | CCCAAAGGCTGCAATAAAAGGCCCCTGAGGCAGGTATaGTATCATCAGAAAGTTTCAGATAACAATTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKGCNKRPLRQV*YHQKVSDNNYK Trigger: TTTGTAATTGTTATCTGAAACTTTCTGATGATACAATACCTGCCTCAGGGGCCTTTTATTGCAGCCTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR CAA 72 bp | TACTCAAAGAAGTTCACTAAGTCTTCTGCAGTTTATTaGACAAACACCACATCCCTAATAGCCTACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSKKFTKSSAVY*TNTTSLIAYCS Trigger: AGAACAGTAGGCTATTAGGGATGTGGTGTTTGTCAAATAAACTGCAGAAGACTTAGTGAACTTCTTTGAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| 3UTR CAA 72 bp | TGCCAACTGTTAGTGGTCATTACTAAGTACCTGTTTTaGCAACTTAAGTGTAGCAAGGATAACTATATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQLLVVITKYLF*QLKCSKDNYMA Trigger: AGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAGTAATGACCACTAACAGTTGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||
| CDS-3UTR TCA 90 bp | ATCAACAATGTGCATTTTTGGGTTTATAGAGGTGGAAATCATATCCTGAAGCATATGTCTTGCAAGATTTaGAGTTTGGCTGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: INNVHFWVYRGGNHILKHMSCKI*SLAEEF Trigger: AAACTCTTCAGCCAAACTTCAAATCTTGCAAGACAT...ATGCTTCAGGATATGATTTCCACCTCTATAAACCCAAAAATGCACATTGTTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| CDS-3UTR CAA 90 bp | GCAGGAGGCTTACTCAGATGTTATGGTCACTCTGGGCTACACAGTGAGTTTCAGACAGTCCAGGGCCCTTaGTATTGTTCCAACTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGGLLRCYGHSGLHSEFQTVQGP*YCSNLD Trigger: GTCTAAGTTGGAACAATACAAAGGGCCCTGGACTGT...CTGAAACTCACTGTGTAGCCCAGAGTGACCATAACATCTGAGTAAGCCTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232595.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGATTGATCCACATATCACTGTCACACTTTCGATCCATGCCTGCCTCTACACAGTCCAGGGCCCTTaGTATTGTTCCAACTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALIDPHITVTLSIHACLYTVQGP*YCSNLD Trigger: GTCTAAGTTGGAACAATACAAAGGGCCCTGGACTGT...GTAGAGGCAGGCATGGATCGAAAGTGTGACAGTGATATGTGGATCAATCAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 ENSMUST00000232663.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTTTCTTCCTTAGTCCCTGCTTCCAGGTTCCTAGTCTAGCCTTTATCCTGATTTTCTGGTTCTTATaGCCTCACTCTCCACAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIFFLSPCFQVPSLAFILIFWFL*PHSPQS Trigger: GGACTGTGGAGAGTGAGGCAATAAGAACCAGAAAAT...CAGGATAAAGGCTAGACTAGGAACCTGGAAGCAGGGACTAAGGAAGAAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| CDS-3UTR CAA 90 bp | ATCAACAATGTGCATTTTTGGGTTTATAGAGGTGGAAATCATATCCTGAAGCATACAGTCCAGGGCCCTTaGTATTGTTCCAACTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: INNVHFWVYRGGNHILKHTVQGP*YCSNLD Trigger: GTCTAAGTTGGAACAATACAAAGGGCCCTGGACTGT...ATGCTTCAGGATATGATTTCCACCTCTATAAACCCAAAAATGCACATTGTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088811.7 |
||
| CDS-3UTR CAA 90 bp | TTACTAAGTACCTGTTTTTGCAACTTAAGTGTAGCAAGGATAACTATATGGCTGACAGTCCAGGGCCCTTaGTATTGTTCCAACTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSTCFCNLSVARITIWLTVQGP*YCSNLD Trigger: GTCTAAGTTGGAACAATACAAAGGGCCCTGGACTGT...CAGCCATATAGTTATCCTTGCTACACTTAAGTTGCAAAAACAGGTACTTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231482.2 ENSMUST00000232473.2 |
||