RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP148 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022811

Ensembl transcript IDs: ENSMUST00000089677.7, ENSMUST00000165418.9, ENSMUST00000232023.2

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCGGTCTTCCTCCATCTTTGCACAAGAGTGGTAAGGCCATTCAATaGTTAGTGAGAGTGAGCACAGGCGAAGCCACATCTAGCCTGTCC +
Preference number: 1 (lower is better)
Translates to: SGLPPSLHKSGKAIQ*LVRVSTGEATSSLS
Trigger: GGACAGGCTAGATGTGGCTTCGCCTGTGCTCACTCTCACTAAGCATTGAATGGCCTTACCACTCTTGTGCAAAGATGGAGGAAGACCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 90 bp GGTTACAGCACCGTGCCAATAAGCCAGGCTCTGAGCACTGACTTTTaGAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: GYSTVPISQALSTDF*KGQLIDICPKNGGS
Trigger: GCTGCCTCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAGAGCCTGGCTTATTGGCACGGTGCTGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 90 bp CAGGCAGGAAAGCTTTCTAAACCAACACAGGGAAACCCAGCCTGTTaGGATGCTTCTCGAAGGATGAAGATACAAGCTGAGCCTGGCAGG +
Preference number: 1 (lower is better)
Translates to: QAGKLSKPTQGNPAC*DASRRMKIQAEPGR
Trigger: CCTGCCAGGCTCAGCTTGTATCTTCATCCTTCGAGAAGCATCTCAACAGGCTGGGTTTCCCTGTGTTGGTTTAGAAAGCTTTCCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 90 bp AACCAACACAGGGAAACCCAGCCTGTTGAGATGCTTCTCGAAGGATaGAGATACAAGCTGAGCCTGGCAGGCATCTGGAATTTCACAGTA +
Preference number: 1 (lower is better)
Translates to: NQHRETQPVEMLLEG*RYKLSLAGIWNFTV
Trigger: TACTGTGAAATTCCAGATGCCTGCCAGGCTCAGCTTGTATCTTCATCCTTCGAGAAGCATCTCAACAGGCTGGGTTTCCCTGTGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 90 bp CTCTCCCCACCAAGCCAAATCACTCAAGAACCGGGATCTAGGGAATaGATAGTAGACCGTCAGTGGTACCATTACGTACAGTTGGTTACA +
Preference number: 1 (lower is better)
Translates to: LSPPSQITQEPGSRE*IVDRQWYHYVQLVT
Trigger: TGTAACCAACTGTACGTAATGGTACCACTGACGGTCTACTATTCATTCCCTAGATCCCGGTTCTTGAGTGATTTGGCTTGGTGGGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 90 bp AAAGCTATGAACTCATTAAACCTTGTAATGTCAGTTCACGTCCCGTaGCCAGGGGTGAAACAAGCCACCACTGCACTTGAATGGCTCAGT +
Preference number: 1 (lower is better)
Translates to: KAMNSLNLVMSVHVP*PGVKQATTALEWLS
Trigger: ACTGAGCCATTCAAGTGCAGTGGTGGCTTGTTTCACCCCTGGCCACGGGACGTGAACTGACATTACAAGGTTTAATGAGTTCATAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 90 bp ATAAAAATCAAAGAAGTGGCAAAACATCTAGCCTTGCTGGCACTTTaGAAGTGTCCCTCACCTGTGGGAATGAAAGCTTGCCCTGAGCAC +
Preference number: 1 (lower is better)
Translates to: IKIKEVAKHLALLAL*KCPSPVGMKACPEH
Trigger: GTGCTCAGGGCAAGCTTTCATTCCCACAGGTGAGGGACACTTGCAAAGTGCCAGCAAGGCTAGATGTTTTGCCACTTCTTTGATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 90 bp TCTTGTCAAAAGTACTATGAGAAAAATACAAGCACCCATCTAGGGTaGACACGGTCCATCACACCTCATCTGATGAAGCGTTCCTGTGGT +
Preference number: 1 (lower is better)
Translates to: SCQKYYEKNTSTHLG*TRSITPHLMKRSCG
Trigger: ACCACAGGAACGCTTCATCAGATGAGGTGTGATGGACCGTGTGCACCCTAGATGGGTGCTTGTATTTTTCTCATAGTACTTTTGACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 90 bp ACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATaGGATACATGTGCAGTAAGAACTGAAGCGCAAACAGCAGCAATG +
Preference number: 1 (lower is better)
Translates to: TKIKTTGATQLFQSQ*DTCAVRTEAQTAAM
Trigger: CATTGCTGCTGTTTGCGCTTCAGTTCTTACTGCACATGTATCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 90 bp CACAGTATGTATGCCCTTGAAGCAATGAGGTTAACCTGCTTTATTTaGGTACCAAGGTCCCTTCCAGACAGCATTAAAATAAAGACAAGT +
Preference number: 1 (lower is better)
Translates to: HSMYALEAMRLTCFI*VPRSLPDSIKIKTS
Trigger: ACTTGTCTTTATTTTAATGCTGTCTGGAAGGGACCTTGGTACCCAAATAAAGCAGGTTAACCTCATTGCTTCAAGGGCATACATACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 90 bp CTGTACAAAGAAACTGACACCGATATGCATACTTCCATAGAGAAGTaGGTGCTTCAGCGGTTGTGTGTTTTGGTAAAAGGTTTGAAAGTA +
Preference number: 1 (lower is better)
Translates to: LYKETDTDMHTSIEK*VLQRLCVLVKGLKV
Trigger: TACTTTCAAACCTTTTACCAAAACACACAACCGCTGAAGCACTCACTTCTCTATGGAAGTATGCATATCGGTGTCAGTTTCTTTGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR CCA 90 bp AAAAACAGACCCTTACACTGTACAAGAAATGCATCAAGTGCTCAGTaGAACCACACTGTGTTTTTAATCAGGTTCAACTTAGGAGATAAA +
Preference number: 1 (lower is better)
Translates to: KNRPLHCTRNASSAQ*NHTVFLIRFNLGDK
Trigger: TTTATCTCCTAAGTTGAACCTGATTAAAAACACAGTGTGGTTCCACTGAGCACTTGATGCATTTCTTGTACAGTGTAAGGGTCTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 90 bp CAAACAAAATGCAGTTATTGGATTATCTTGCTATTCTTATCAGCTTaGTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTA +
Preference number: 1 (lower is better)
Translates to: QTKCSYWIILLFLSA*YERTALRTVQHSIL
Trigger: TAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGATAAGAATAGCAAGATAATCCAATAACTGCATTTTGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR CAA 90 bp TTAAGGGAAGGGAAGGGAGGCTCCACTCTGTGTCTGATACTGAGTTaGCAGCTGATTCTCCCACTGACCCCTAGGGGTGCAGGAACCATC +
Preference number: 2 (lower is better)
Translates to: LREGKGGSTLCLILS*QLILPLTPRGAGTI
Trigger: GATGGTTCCTGCACCCCTAGGGGTCAGTGGGAGAATCAGCTGCAAACTCAGTATCAGACACAGAGTGGAGCCTCCCTTCCCTTCCCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CAA 90 bp TCCTTCAGTGTGATGGGCACTAAGTTCAGCGGTCTTCCTCCATCTTaGCACAAGAGTGGTAAGGCCATTCAATGCTTAGTGAGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: SFSVMGTKFSGLPPS*HKSGKAIQCLVRVS
Trigger: GCTCACTCTCACTAAGCATTGAATGGCCTTACCACTCTTGTGCAAAGATGGAGGAAGACCGCTGAACTTAGTGCCCATCACACTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR CCA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGATCCTGGCAAGGTGGCTaGTGGCTGAAAACAGGTCTA +
Preference number: 2 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGSWQGG*WLKTGL
Trigger: TAGACCTGTTTTCAGCCACCAGCCACCTTGCCAGGA...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTCGCATCCTTACTCGATaGACCCTATTTACAGCATGG +
Preference number: 2 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVRILTR*TLFTAW
Trigger: CCATGCTGTAAATAGGGTTCATCGAGTAAGGATGCG...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR GCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTCCCAGCCTGTTGAGATaGTTCTCGAAGGATGAAGAT +
Preference number: 2 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVPSLLR*FSKDED
Trigger: ATCTTCATCCTTCGAGAAGCATCTCAACAGGCTGGG...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR CCA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGAAATGCTTTCGGATGCTaGAGAGCTCCTGCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRNAFGC*RAPALS
Trigger: AGACAAGGCAGGAGCTCTCCAGCATCCGAAAGCATT...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTGAGCAACCCCACTCTTaGGTAATCTGTTCTAAAGTG +
Preference number: 2 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVEQPHS*VICSKV
Trigger: CACTTTAGAACAGATTACTCAAGAGTGGGGTTGCTC...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAACTTCCATAGAGAAGTaGGTGCTTCAGCGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPTSIEK*VLQRLC
Trigger: ACACAACCGCTGAAGCACTCACTTCTCTATGGAAGT...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTCTCACATCAAGTCCTTaGTTGTCAAGACACGTTTAT +
Preference number: 2 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVLTSSP*LSRHVY
Trigger: ATAAACGTGTCTTGACAATCAAGGACTTGATGTGAG...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR CCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTCTTTTATCTTGGTGTaGGTGAATAGCAAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPSFILV*VNSKVL
Trigger: CAGAACCTTGCTATTCACCCACACCAAGATAAAAGA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAGAGCAACCCCACTCTTaGGTAATCTGTTCTAAAGTG +
Preference number: 2 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPEQPHS*VICSKV
Trigger: CACTTTAGAACAGATTACTCAAGAGTGGGGTTGCTC...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGACAGTTCAAGGAATGCTaGCTAACCAAACAAAATGCA +
Preference number: 2 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRQFKEC*LTKQNA
Trigger: TGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTG...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTTATCTACTTCACAACTaGACTGAAGTTACCTCAACA +
Preference number: 2 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVYLLHN*TEVTST
Trigger: TGTTGAGGTAACTTCAGTTCAGTTGTGAAGTAGATA...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTATTCATCTGGTCAGCTaGGAAATCAAGCTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVIHLVS*EIKLEK
Trigger: TTTTTCAAGCTTGATTTCTCAGCTGACCAGATGAAT...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTATTCAAACCCGACAATaGAAAATTTCCCCCATATTG +
Preference number: 2 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVIQTRQ*KISPIL
Trigger: CAATATGGGGGAAATTTTTCATTGTCGGGTTTGAAT...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR TCA 90 bp CACACATCAGTCTTCAGATCGATAATGGCAGAACTTAAAATAGTCACTTCAAAGAAGTTCTTGAAGATCTaGCAGCAAAGCTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: HTSVFRSIMAELKIVTSKKFLKI*QQSCQM
Trigger: CATTTGACAGCTTTGCTGTCAGATCTTCAAGAACTT...CTTTGAAGTGACTATTTTAAGTTCTGCCATTATCGATCTGAAGACTGATGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAGATTCCCTGCTGAAGTaGAATACTATGCTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPDSLLK*NTMLKN
Trigger: GTTTTTCAGCATAGTATTGCACTTCAGCAGGGAATC...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR TCA 72 bp TGCTGGCACTTTGCAAGTGTCCCTCACCTGTGGGAATaGAAGCTTGCCCTGAGCACAAGGCCTCTTCTACCT +
Preference number: 3 (lower is better)
Translates to: CWHFASVPHLWE*KLALSTRPLLP
Trigger: AGGTAGAAGAGGCCTTGTGCTCAGGGCAAGCTTTCATTCCCACAGGTGAGGGACACTTGCAAAGTGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp CAAGTGTCCCTCACCTGTGGGAATGAAAGCTTGCCCTaGGCACAAGGCCTCTTCTACCTCCTAAGAGACAGA +
Preference number: 3 (lower is better)
Translates to: QVSLTCGNESLP*AQGLFYLLRDR
Trigger: TCTGTCTCTTAGGAGGTAGAAGAGGCCTTGTGCTCAGGGCAAGCTTTCATTCCCACAGGTGAGGGACACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 72 bp CACTGTCAGAAGACGAAGTCCTGGCAAGGTGGCTGGTaGCTGAAAACAGGTCTATCTACACTAATGGAGGGG +
Preference number: 3 (lower is better)
Translates to: HCQKTKSWQGGW*LKTGLSTLMEG
Trigger: CCCCTCCATTAGTGTAGATAGACCTGTTTTCAGCCACCAGCCACCTTGCCAGGACTTCGTCTTCTGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp AGGGAAACCCAGCCTGTTGAGATGCTTCTCGAAGGATaGAGATACAAGCTGAGCCTGGCAGGCATCTGGAAT +
Preference number: 3 (lower is better)
Translates to: RETQPVEMLLEG*RYKLSLAGIWN
Trigger: ATTCCAGATGCCTGCCAGGCTCAGCTTGTATCTTCATCCTTCGAGAAGCATCTCAACAGGCTGGGTTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp CTCCTAAGAGACAGAAATGACCCATTGCTGGCACCCTaGGTCAGAGCTAAGATGGTGGACTCCTACCTGACT +
Preference number: 3 (lower is better)
Translates to: LLRDRNDPLLAP*VRAKMVDSYLT
Trigger: AGTCAGGTAGGAGTCCACCATCTTAGCTCTGACTCAGGGTGCCAGCAATGGGTCATTTCTGTCTCTTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 72 bp CCTCCATCTTTGCACAAGAGTGGTAAGGCCATTCAATaGTTAGTGAGAGTGAGCACAGGCGAAGCCACATCT +
Preference number: 3 (lower is better)
Translates to: PPSLHKSGKAIQ*LVRVSTGEATS
Trigger: AGATGTGGCTTCGCCTGTGCTCACTCTCACTAAGCATTGAATGGCCTTACCACTCTTGTGCAAAGATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 72 bp TGCATCCCACTGTCAGAAGACGAAGTCCTGGCAAGGTaGCTGGTGGCTGAAAACAGGTCTATCTACACTAAT +
Preference number: 3 (lower is better)
Translates to: CIPLSEDEVLAR*LVAENRSIYTN
Trigger: ATTAGTGTAGATAGACCTGTTTTCAGCCACCAGCCACCTTGCCAGGACTTCGTCTTCTGACAGTGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 72 bp GGTGTGGGAGACTCCCATTTTCACTTCACTTCACTTTaGCCTCCAGTGTCTCTTGATGCAGGAAGTGGATGT +
Preference number: 3 (lower is better)
Translates to: GVGDSHFHFTSL*PPVSLDAGSGC
Trigger: ACATCCACTTCCTGCATCAAGAGACACTGGAGGCCAAAGTGAAGTGAAGTGAAAATGGGAGTCTCCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 72 bp ACCGTGCCAATAAGCCAGGCTCTGAGCACTGACTTTTaGAAGGGCCAACTAATTGACATTTGTCCCAAGAAC +
Preference number: 3 (lower is better)
Translates to: TVPISQALSTDF*KGQLIDICPKN
Trigger: GTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAGAGCCTGGCTTATTGGCACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 72 bp AACTCATTAAACCTTGTAATGTCAGTTCACGTCCCGTaGCCAGGGGTGAAACAAGCCACCACTGCACTTGAA +
Preference number: 3 (lower is better)
Translates to: NSLNLVMSVHVP*PGVKQATTALE
Trigger: TTCAAGTGCAGTGGTGGCTTGTTTCACCCCTGGCCACGGGACGTGAACTGACATTACAAGGTTTAATGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp AAGCTTTCTAAACCAACACAGGGAAACCCAGCCTGTTaGGATGCTTCTCGAAGGATGAAGATACAAGCTGAG +
Preference number: 3 (lower is better)
Translates to: KLSKPTQGNPAC*DASRRMKIQAE
Trigger: CTCAGCTTGTATCTTCATCCTTCGAGAAGCATCTCAACAGGCTGGGTTTCCCTGTGTTGGTTTAGAAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp ATTCCAAAGCCAATGAGATACATGTGCAGTAAGAACTaGAGCGCAAACAGCAGCAATGCTTTCGGATGCTGG +
Preference number: 3 (lower is better)
Translates to: IPKPMRYMCSKN*SANSSNAFGCW
Trigger: CCAGCATCCGAAAGCATTGCTGCTGTTTGCGCTTCAGTTCTTACTGCACATGTATCTCATTGGCTTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 72 bp AAGTACTATGAGAAAAATACAAGCACCCATCTAGGGTaGACACGGTCCATCACACCTCATCTGATGAAGCGT +
Preference number: 3 (lower is better)
Translates to: KYYEKNTSTHLG*TRSITPHLMKR
Trigger: ACGCTTCATCAGATGAGGTGTGATGGACCGTGTGCACCCTAGATGGGTGCTTGTATTTTTCTCATAGTACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 72 bp AAGCACGCATCTACAGGGTCAACAGCAAAGTCAAAATaGAAGTTAACAAAGCGTCATCTCCCAAGGGTACTG +
Preference number: 3 (lower is better)
Translates to: KHASTGSTAKSK*KLTKRHLPRVL
Trigger: CAGTACCCTTGGGAGATGACGCTTTGTTAACTTCCATTTTGACTTTGCTGTTGACCCTGTAGATGCGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp CAGGTGAAACTCAGCACTACACAGTATGTATGCCCTTaGAGCAATGAGGTTAACCTGCTTTATTTGGGTACC +
Preference number: 3 (lower is better)
Translates to: QVKLSTTQYVCP*SNEVNLLYLGT
Trigger: GGTACCCAAATAAAGCAGGTTAACCTCATTGCTTCAAGGGCATACATACTGTGTAGTGCTGAGTTTCACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp GAAACTGACACCGATATGCATACTTCCATAGAGAAGTaGGTGCTTCAGCGGTTGTGTGTTTTGGTAAAAGGT +
Preference number: 3 (lower is better)
Translates to: ETDTDMHTSIEK*VLQRLCVLVKG
Trigger: ACCTTTTACCAAAACACACAACCGCTGAAGCACTCACTTCTCTATGGAAGTATGCATATCGGTGTCAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR TCA 72 bp AAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATaGGATACATGTGCAGTAAGAACTGAAGCGCAAACA +
Preference number: 3 (lower is better)
Translates to: KTTGATQLFQSQ*DTCAVRTEAQT
Trigger: TGTTTGCGCTTCAGTTCTTACTGCACATGTATCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR CCA 72 bp TATGCCCTTGAAGCAATGAGGTTAACCTGCTTTATTTaGGTACCAAGGTCCCTTCCAGACAGCATTAAAATA +
Preference number: 3 (lower is better)
Translates to: YALEAMRLTCFI*VPRSLPDSIKI
Trigger: TATTTTAATGCTGTCTGGAAGGGACCTTGGTACCCAAATAAAGCAGGTTAACCTCATTGCTTCAAGGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp TTAGGAGATAAATGTCTGCTCTTGTCAAAAGTACTATaGGAAAAATACAAGCACCCATCTAGGGTGCACACG +
Preference number: 3 (lower is better)
Translates to: LGDKCLLLSKVL*EKYKHPSRVHT
Trigger: CGTGTGCACCCTAGATGGGTGCTTGTATTTTTCTCATAGTACTTTTGACAAGAGCAGACATTTATCTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR GCA 72 bp AAACAGACCCTTACACTGTACAAGAAATGCATCAAGTaGTCAGTGGAACCACACTGTGTTTTTAATCAGGTT +
Preference number: 3 (lower is better)
Translates to: KQTLTLYKKCIK*SVEPHCVFNQV
Trigger: AACCTGATTAAAAACACAGTGTGGTTCCACTGAGCACTTGATGCATTTCTTGTACAGTGTAAGGGTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR TCA 72 bp GCTATGAAATATGAAGAAATCTATCTACTTCACAACTaGACTGAAGTTACCTCAACACTTGCGGGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: AMKYEEIYLLHN*TEVTSTLAGLN
Trigger: ATTCAAGCCCGCAAGTGTTGAGGTAACTTCAGTTCAGTTGTGAAGTAGATAGATTTCTTCATATTTCATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
3UTR-3UTR CAA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACAGCGGTTGTGTGTTTaGGTAAAAGGTTTGAAAGTA +
Preference number: 3 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPQRLCV*VKGLKV
Trigger: TACTTTCAAACCTTTTACCAAAACACACAACCGCTG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGACCAGCTCTGGATCCATaGTATGGAGCACGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGPALDP*YGARKG
Trigger: GCCCTTCCGTGCTCCATATCATGGATCCAGAGCTGG...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTTCAGCACTTGTCCCTaGTCCCCGAAGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMFSTCP*SPKVHL
Trigger: CAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTGTGCACAGGTTTGCTaGGGCCCTCCTGCAAGTTAT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMCAQVC*GPPASY
Trigger: ATAACTTGCAGGAGGGCCCCAGCAAACCTGTGCACA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGAAGGCTGAGAGGCTATaGTGCCCACATTCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMKAERL*CPHSVR
Trigger: ACGCACTGAATGTGGGCACCATAGCCTCTCAGCCTT...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGAGTCTGCTGTTGACGTaGCAGAGGCGTGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMSLLLT*QRRGLS
Trigger: AGACAAACCACGCCTCTGCCACGTCAACAGCAGACT...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
3UTR CAA 72 bp GTGATGGGCACTAAGTTCAGCGGTCTTCCTCCATCTTaGCACAAGAGTGGTAAGGCCATTCAATGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: VMGTKFSGLPPS*HKSGKAIQCLV
Trigger: CACTAAGCATTGAATGGCCTTACCACTCTTGTGCAAAGATGGAGGAAGACCGCTGAACTTAGTGCCCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGAGGGGTGAAATGGTTTaGCTTTGCTCCAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQRGEMV*LCSKGC
Trigger: GCAGCCCTTGGAGCAAAGTCAAACCATTTCACCCCT...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCCCAGCTCTGGATCCATaGTATGGAGCACGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPPALDP*YGARKG
Trigger: GCCCTTCCGTGCTCCATATCATGGATCCAGAGCTGG...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTGCTGTGCACAGGTTTaGTGGGGCCCTCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPCCAQV*WGPPAS
Trigger: ACTTGCAGGAGGGCCCCAGCAAACCTGTGCACAGCA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGGAATGCTGGCGGATTTaGAAGGGTCTGGTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMECWRI*KGLVVS
Trigger: ACTGACAACCAGACCCTTCCAAATCCGCCAGCATTC...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGAGTCTGCTGTTGACGTaGCAGAGGCGTGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQSLLLT*QRRGLS
Trigger: AGACAAACCACGCCTCTGCCACGTCAACAGCAGACT...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGCATTCTCTGACTGGGTaGCTTCAGGTACATCGGAAG +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQHSLTG*LQVHRK
Trigger: CTTCCGATGTACCTGAAGTCACCCAGTCAGAGAATG...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTTGGCAGTGCTAAACTaGGTTGCTATTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMLAVLN*VAIPAL
Trigger: CAGAGCTGGAATAGCAACTCAGTTTAGCACTGCCAA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGATGCTGTGCACAGGTTTaGTGGGGCCCTCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRCCAQV*WGPPAS
Trigger: ACTTGCAGGAGGGCCCCAGCAAACCTGTGCACAGCA...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTCAGTGCGTACTCCCTaGTGTTGTTACTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMSVRTP*CCYLQL
Trigger: AAGCTGCAAGTAACAACAGCAGGGAGTACGCACTGA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGGTCTATGGAAGAGAATaGTGGCGGATTTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMVYGRE*WRIWKG
Trigger: ACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGAC...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGAGTCTATGGAAGAGAATaGTGGCGGATTTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGVYGRE*WRIWKG
Trigger: ACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGAC...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGAGAAAAGGGAAACGGGTaGTGTGAGTCACCGACTATT +
Preference number: 4 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGEKGNG*CESPTI
Trigger: AATAGTCGGTGACTCACAGCACCCGTTTCCCTTTTC...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGGAGCACGGAAGGGCTaGTCAAAGGAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPGARKG*SKELIW
Trigger: CCAAATGAGCTCCTTTGAGCAGCCCTTCCGTGCTCC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCCAGACACGGCGGACTaGCCAGACACTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIPDTAD*PDTPPI
Trigger: AATGGGTGGAGTGTCTGGCCAGTCCGCCGTGTCTGG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTTCACTGTCTCCTCGTaGACCATGAGTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMFTVSS*TMSSSW
Trigger: CCATGATGAACTCATGGTCCACGAGGAGACAGTGAA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGGAGAACCAACTTGGGTaGGTGTATTTCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMENQLG*VYFSRC
Trigger: GCATCTGGAGAAATACACCCACCCAAGTTGGTTCTC...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTCCACATTCAGTGCCTaGGAATCCAGTATGGATGCT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMSTFSA*ESSMDA
Trigger: AGCATCCATACTGGATTCCCAGGCACTGAATGTGGA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGAAGTCTGGCCAGTTGTaGCATCTGGTGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMKSGQL*HLVKMS
Trigger: TGACATCTTCACCAGATGCCACAACTGGCCAGACTT...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGTCGATCTTGAAGTACTaGCTCCTGCAGTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQSILKY*LLQFSR
Trigger: TCTGGAGAACTGCAGGAGTCAGTACTTCAAGATCGA...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGGGCAAACTTCGATCTTaGAGTACTGACTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQGKLRS*STDSCS
Trigger: ACTGCAGGAGTCAGTACTTCAAGATCGAAGTTTGCC...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGAGGTTTTTCGCCTGTATaGATGAAGACATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGGFSPV*MKTCLC
Trigger: ACAGAGGCATGTCTTCATTCATACAGGCGAAAAACC...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGATGCATCTTCTAGGTaGGAGCCTCCCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPDASSR*EPPTDE
Trigger: CTCATCAGTGGGAGGCTCTCACCTAGAAGATGCATC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTGATGCATCTTCTAGGTaGGAGCCTCCCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVDASSR*EPPTDE
Trigger: CTCATCAGTGGGAGGCTCTCACCTAGAAGATGCATC...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCCAAAAAGTCTGCTGTTaGCGTGGCAGAGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPQKVCC*RGRGVV
Trigger: AACCACGCCTCTGCCACGTCAACAGCAGACTTTTTG...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGCCTGCTGTTGTTACTTaGAGCTTGAAGATACCGCTT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMPAVVT*SLKIPL
Trigger: AAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGG...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGTCAGTGCGTACTCCCTaGTGTTGTTACTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQSVRTP*CCYLQL
Trigger: AAGCTGCAAGTAACAACAGCAGGGAGTACGCACTGA...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGGTTCTGTCCAAAGCCTaGTGCAGAAACTTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMVLSKA*CRNLEY
Trigger: ATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAAC...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCCTGGTGGACAGGCTGTaGCTCAGCTTTCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPLVDRL*LSFLLR
Trigger: TCTCAGAAGAAAGCTGAGGCACAGCCTGTCCACCAG...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACCAGACACGGCGGACTaGCCAGACACTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPPDTAD*PDTPPI
Trigger: AATGGGTGGAGTGTCTGGCCAGTCCGCCGTGTCTGG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTGGATAGGGGTGAAATaGTTTGACTTTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMWIGVK*FDFAPR
Trigger: CCTTGGAGCAAAGTCAAACCATTTCACCCCTATCCA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTAAGGCTGAGAGGCTATaGTGCCCACATTCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVKAERL*CPHSVR
Trigger: ACGCACTGAATGTGGGCACCATAGCCTCTCAGCCTT...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGCCAACATTCTCTGACTaGGTGACTTCAGGTACATCG +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQPTFSD*VTSGTS
Trigger: CGATGTACCTGAAGTCACCCAGTCAGAGAATGTTGG...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGCCTGCTGCAGAAACTTaGAGTATTCCTGCAACATGT +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMPAAET*SIPATC
Trigger: ACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGG...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTTGCTATTCCAGCTCTaGATCCATGATATGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMLLFQL*IHDMEH
Trigger: GTGCTCCATATCATGGATCCAGAGCTGGAATAGCAA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGATGGAGAATTCATTCCTaGTCGAAAGCTATTGATGGG +
Preference number: 4 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGWRIHS*SKAIDG
Trigger: CCCATCAATAGCTTTCGATCAGGAATGAATTCTCCA...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGTCGTGGGTGTCCATCTaGTCTTCGTCATTTTTCACT +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQSWVSI*SSSFFT
Trigger: AGTGAAAAATGACGAAGAGCAGATGGACACCCACGA...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGCTCAACAGCATACTCTaGCACCATGTACTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQLNSIL*HHVLIL
Trigger: AAGGATGAGTACATGGTGGCAGAGTATGCTGTTGAG...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGGTTCTGTCCAAAGCCTaGTGCAGAAACTTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQVLSKA*CRNLEY
Trigger: ATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAAC...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp CACACATCAGTCTTCAGATCGATAATGGCAGAACTTAAAATAGTCACTTCAAAGGGAGCACGGAAGGGCTaGTCAAAGGAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: HTSVFRSIMAELKIVTSKGARKG*SKELIW
Trigger: CCAAATGAGCTCCTTTGAGCAGCCCTTCCGTGCTCC...CTTTGAAGTGACTATTTTAAGTTCTGCCATTATCGATCTGAAGACTGATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGTCTGATGAGGATGCTTaGGAGCTTGATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQSDEDA*ELDPTF
Trigger: GAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGA...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGGCAAACTTCGATCTTaGAGTACTGACTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPGKLRS*STDSCS
Trigger: ACTGCAGGAGTCAGTACTTCAAGATCGAAGTTTGCC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGAGCCAGAATCTTCCTCTaGTGTCAGAAGGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRARIFL*CQKATF
Trigger: AAAGGTGGCCTTCTGACATCAGAGGAAGATTCTGGC...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTATTGTAAGGATTTTTaGAGGAGAGCGTTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMYCKDF*RRALFP
Trigger: CGGAAACAACGCTCTCCTGCAAAAATCCTTACAATA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGAGATCGATGTCAGCACTaGCTTCTGAGTCCAGTAACG +
Preference number: 4 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRDRCQH*LLSPVT
Trigger: CGTTACTGGACTCAGAAGGCAGTGCTGACATCGATC...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTCCACATTCAGTGCCTaGGAATCCAGTATGGATGCT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPSTFSA*ESSMDA
Trigger: AGCATCCATACTGGATTCCCAGGCACTGAATGTGGA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGGGATTTGGAAGGGTCTaGTTGTCAGTCACAAAGTTA +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQGFGRV*LSVTKL
Trigger: TAACTTTGTGACTGACAACCAGACCCTTCCAAATCC...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTATGGAAGAGAATGCTaGCGGATTTGGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPYGREC*RIWKGL
Trigger: CAGACCCTTCCAAATCCGCCAGCATTCTCTTCCATA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCATTCAGCACTTGTCCCTaGTCCCCGAAGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPFSTCP*SPKVHL
Trigger: CAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAA...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGGTTTTTCGCCTGTATaGATGAAGACATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPGFSPV*MKTCLC
Trigger: ACAGAGGCATGTCTTCATTCATACAGGCGAAAAACC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTCAGAAGGCCACCTTTaGTGGCACATCTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPSEGHL*WHICLV
Trigger: AACTAAACAGATGTGCCATCAAAGGTGGCCTTCTGA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAAGGGGTGAAATGGTTTaGCTTTGCTCCAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPRGEMV*LCSKGC
Trigger: GCAGCCCTTGGAGCAAAGTCAAACCATTTCACCCCT...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCATTCTCTGACTGGGTaGCTTCAGGTACATCGGAAG +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIHSLTG*LQVHRK
Trigger: CTTCCGATGTACCTGAAGTCACCCAGTCAGAGAATG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACAAAAAGTCTGCTGTTaGCGTGGCAGAGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPQKVCC*RGRGVV
Trigger: AACCACGCCTCTGCCACGTCAACAGCAGACTTTTTG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGCTTTCTTCTGAGAAGTaGCTTGATCCAAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQLSSEK*LDPKSL
Trigger: CAGACTTTTTGGATCAAGTCACTTCTCAGAAGAAAG...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCAGTTGTGGCATCTGGTaGAGATGTCATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIISCGIW*RCHPSS
Trigger: AGAGCTGGGATGACATCTTCACCAGATGCCACAACT...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGTATTGTAAGGATTTTTaGAGGAGAGCGTTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQYCKDF*RRALFP
Trigger: CGGAAACAACGCTCTCCTGCAAAAATCCTTACAATA...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCCTCAACAGCATACTCTaGCACCATGTACTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPLNSIL*HHVLIL
Trigger: AAGGATGAGTACATGGTGGCAGAGTATGCTGTTGAG...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGAGTCCAGTAACGCCTaGTTATCCACAAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPESSNA*LSTSSK
Trigger: TTTTGAGCTTGTGGATAAGCAGGCGTTACTGGACTC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCGATCGATGTCAGCACTaGCTTCTGAGTCCAGTAACG +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIDRCQH*LLSPVT
Trigger: CGTTACTGGACTCAGAAGGCAGTGCTGACATCGATC...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCAATCTCCACATTCAGTaGCTGGGAATCCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPNLHIQ*LGIQYG
Trigger: TCCATACTGGATTCCCAGGCACTGAATGTGGAGATT...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACTGGTGGACAGGCTGTaGCTCAGCTTTCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPLVDRL*LSFLLR
Trigger: TCTCAGAAGAAAGCTGAGGCACAGCCTGTCCACCAG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTGGATAGGGGTGAAATaGTTTGACTTTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPWIGVK*FDFAPR
Trigger: CCTTGGAGCAAAGTCAAACCATTTCACCCCTATCCA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTCTGATGAGGATGCTTaGGAGCTTGATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPSDEDA*ELDPTF
Trigger: GAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCGAATGCTGGCGGATTTaGAAGGGTCTGGTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIECWRI*KGLVVS
Trigger: ACTGACAACCAGACCCTTCCAAATCCGCCAGCATTC...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGAAAGTCTGGCCAGTTGTaGCATCTGGTGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRKSGQL*HLVKMS
Trigger: TGACATCTTCACCAGATGCCACAACTGGCCAGACTT...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp CACACATCAGTCTTCAGATCGATAATGGCAGAACTTAAAATAGTCACTTCAAAGTCGATCTTGAAGTACTaGCTCCTGCAGTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HTSVFRSIMAELKIVTSKSILKY*LLQFSR
Trigger: TCTGGAGAACTGCAGGAGTCAGTACTTCAAGATCGA...CTTTGAAGTGACTATTTTAAGTTCTGCCATTATCGATCTGAAGACTGATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTCTCCTCGTGGACCATaGGTTCATCATGGGATATCA +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIISPRGP*VHHGIS
Trigger: TGATATCCCATGATGAACTCATGGTCCACGAGGAGA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAGCCAGAATCTTCCTCTaGTGTCAGAAGGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPARIFL*CQKATF
Trigger: AAAGGTGGCCTTCTGACATCAGAGGAAGATTCTGGC...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCAGTATCTGCAACGCTaGAGGAAATCTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIQYLQR*RKSHAV
Trigger: GACAGCATGAGATTTCCTTCAGCGTTGCAGATACTG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGATCGGAAGAATTGATTaGTATGCTAGAAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQIGRID*YARSHF
Trigger: GAAGTGACTTCTAGCATATCAATCAATTCTTCCGAT...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTTGGCAGTGCTAAACTaGGTTGCTATTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIILAVLN*VAIPAL
Trigger: CAGAGCTGGAATAGCAACTCAGTTTAGCACTGCCAA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAATTGCCCTGGAAGACTaGATTTCGTCTATGCCGCCA +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPIALED*ISSMPP
Trigger: TGGCGGCATAGACGAAATGCAGTCTTCCAGGGCAAT...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGAAATCTCCACATTCAGTaGCTGGGAATCCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRNLHIQ*LGIQYG
Trigger: TCCATACTGGATTCCCAGGCACTGAATGTGGAGATT...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCAGTCACTTCAGTATCTaGAACGCTGAAGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPSHFSI*NAEGNL
Trigger: GAGATTTCCTTCAGCGTTGCAGATACTGAAGTGACT...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTATTGATGGGCATGGCTaGATAGACTTGCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVIDGHG*IDLLVY
Trigger: ATAGACAAGCAAGTCTATGCAGCCATGCCCATCAAT...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCGAAAAGGGAAACGGGTaGTGTGAGTCACCGACTATT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIEKGNG*CESPTI
Trigger: AATAGTCGGTGACTCACAGCACCCGTTTCCCTTTTC...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTTTACAACCATTGCCCTaGAAGACTGCATTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVLQPLP*KTAFRL
Trigger: TAGACGAAATGCAGTCTTCCAGGGCAATGGTTGTAA...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTCTGCAGGACCTCATCTaGGATAACATTTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVLQDLI*DNIFVM
Trigger: CATGACAAAAATGTTATCCCAGATGAGGTCCTGCAG...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCCAACATTCTCTGACTaGGTGACTTCAGGTACATCG +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIPTFSD*VTSGTS
Trigger: CGATGTACCTGAAGTCACCCAGTCAGAGAATGTTGG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGGATTTGGAAGGGTCTaGTTGTCAGTCACAAAGTTA +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPGFGRV*LSVTKL
Trigger: TAACTTTGTGACTGACAACCAGACCCTTCCAAATCC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SACYERTALRTVQHSILQTISPK*DLSGVV
Trigger: AACAACTCCAGATAAGTCCCACTTTGGACTAATAGT...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTCAGAAGGCCACCTTTaGTGGCACATCTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIISEGHL*WHICLV
Trigger: AACTAAACAGATGTGCCATCAAAGGTGGCCTTCTGA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCACCCATTACAACCATTaGCCTGGAAGACTGCATTTC +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIITHYNH*PGRLHF
Trigger: GAAATGCAGTCTTCCAGGGCAATGGTTGTAATGGGT...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTTCATCACAGCGAAATaGTTTTTCACCGGTATGGAT +
Preference number: 4 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPFITAK*FFTGMD
Trigger: ATCCATACCGGTGAAAAACCATTTCGCTGTGATGAA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAGAGAACCAACTTGGGTaGGTGTATTTCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPENQLG*VYFSRC
Trigger: GCATCTGGAGAAATACACCCACCCAAGTTGGTTCTC...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAGCAGGTACTTCTGTATaGAACGCATGTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPAGTSV*NACHID
Trigger: GTCAATGTGACATGCGTTTCATACAGAAGTACCTGC...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTGGAGAATTCATTCCTaGTCGAAAGCTATTGATGGG +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIWRIHS*SKAIDG
Trigger: CCCATCAATAGCTTTCGATCAGGAATGAATTCTCCA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAACCCATTACAACCATTaGCCTGGAAGACTGCATTTC +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPTHYNH*PGRLHF
Trigger: GAAATGCAGTCTTCCAGGGCAATGGTTGTAATGGGT...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCATCGTGGGTGTCCATCTaGTCTTCGTCATTTTTCACT +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPSWVSI*SSSFFT
Trigger: AGTGAAAAATGACGAAGAGCAGATGGACACCCACGA...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAGAGTCCAGTAACGCCTaGTTATCCACAAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPESSNA*LSTSSK
Trigger: TTTTGAGCTTGTGGATAAGCAGGCGTTACTGGACTC...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp AATGGGAAAACTATGATTTCAAGCAGTTTCATAACAAAGTGTAGAGGAAACCACCCTGCTGTTGTTACTTaGAGCTTGAAGATACCGCTT +
Preference number: 4 (lower is better)
Translates to: NGKTMISSSFITKCRGNHPAVVT*SLKIPL
Trigger: AAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGG...GTGGTTTCCTCTACACTTTGTTATGAAACTGCTTGAAATCATAGTTTTCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCAGTCACTTCAGTATCTaGAACGCTGAAGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIISHFSI*NAEGNL
Trigger: GAGATTTCCTTCAGCGTTGCAGATACTGAAGTGACT...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCATTGATGGGCATGGCTaGATAGACTTGCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIIDGHG*IDLLVY
Trigger: ATAGACAAGCAAGTCTATGCAGCCATGCCCATCAAT...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTTACAACCATTGCCCTaGAAGACTGCATTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIILQPLP*KTAFRL
Trigger: TAGACGAAATGCAGTCTTCCAGGGCAATGGTTGTAA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTGCTGTCTTCATAGCTaGATAGGGGTGAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIICCLHS*IGVKWF
Trigger: AAACCATTTCACCCCTATCCAGCTATGAAGACAGCA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCTGCAGGACCTCATCTaGGATAACATTTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIILQDLI*DNIFVM
Trigger: CATGACAAAAATGTTATCCCAGATGAGGTCCTGCAG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AATGGGAAAACTATGATTTCAAGCAGTTTCATAACAAAGTGTAGAGGAAACCACCCTGCTGCAGAAACTTaGAGTATTCCTGCAACATGT +
Preference number: 4 (lower is better)
Translates to: NGKTMISSSFITKCRGNHPAAET*SIPATC
Trigger: ACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGG...GTGGTTTCCTCTACACTTTGTTATGAAACTGCTTGAAATCATAGTTTTCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCATTGCTATTCCAGCTCTaGATCCATGATATGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPLLFQL*IHDMEH
Trigger: GTGCTCCATATCATGGATCCAGAGCTGGAATAGCAA...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACAGTGCTCACAAACGTaGGATTTAGGGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPQCSQT*DLGVFK
Trigger: TTTGAAAACCCCTAAATCTCACGTTTGTGAGCACTG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AATGGGAAAACTATGATTTCAAGCAGTTTCATAACAAAGTGTAGAGGAAACCACCAGTGCTCACAAACGTaGGATTTAGGGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NGKTMISSSFITKCRGNHQCSQT*DLGVFK
Trigger: TTTGAAAACCCCTAAATCTCACGTTTGTGAGCACTG...GTGGTTTCCTCTACACTTTGTTATGAAACTGCTTGAAATCATAGTTTTCCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTTTGTCTCTCATCAGTTaGTCAGATACATCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVLSLIS*SDTSVK
Trigger: TTTTACTGATGTATCTGAGCAACTGATGAGAGACAA...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCGTACTTGGAAACTTTaGTGTCTTCATAGCTGGATA +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIRTWKL*CLHSWI
Trigger: TATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp CACACATCAGTCTTCAGATCGATAATGGCAGAACTTAAAATAGTCACTTCAAAGTTCATCACAGCGAAATaGTTTTTCACCGGTATGGAT +
Preference number: 4 (lower is better)
Translates to: HTSVFRSIMAELKIVTSKFITAK*FFTGMD
Trigger: ATCCATACCGGTGAAAAACCATTTCGCTGTGATGAA...CTTTGAAGTGACTATTTTAAGTTCTGCCATTATCGATCTGAAGACTGATGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCATGCTGTCTTCATAGCTaGATAGGGGTGAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPCCLHS*IGVKWF
Trigger: AAACCATTTCACCCCTATCCAGCTATGAAGACAGCA...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCGCTCAAAAGCGTACTTaGAAACTTTGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIAQKRT*KLCCLH
Trigger: ATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGC...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCGGTTTTCAAACCAAGTaGTCCATCCTCATTTATTGT +
Preference number: 4 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIGFQTK*SILIYC
Trigger: ACAATAAATGAGGATGGATCACTTGGTTTGAAAACC...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp CACACATCAGTCTTCAGATCGATAATGGCAGAACTTAAAATAGTCACTTCAAAGATCGGAAGAATTGATTaGTATGCTAGAAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: HTSVFRSIMAELKIVTSKIGRID*YARSHF
Trigger: GAAGTGACTTCTAGCATATCAATCAATTCTTCCGAT...CTTTGAAGTGACTATTTTAAGTTCTGCCATTATCGATCTGAAGACTGATGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACTTTCTTCTGAGAAGTaGCTTGATCCAAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPLSSEK*LDPKSL
Trigger: CAGACTTTTTGGATCAAGTCACTTCTCAGAAGAAAG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACGTACTTGGAAACTTTaGTGTCTTCATAGCTGGATA +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPRTWKL*CLHSWI
Trigger: TATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAGCTCAAAAGCGTACTTaGAAACTTTGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPAQKRT*KLCCLH
Trigger: ATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGC...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR TCA 90 bp AATGGGAAAACTATGATTTCAAGCAGTTTCATAACAAAGTGTAGAGGAAACCACGGTTTTCAAACCAAGTaGTCCATCCTCATTTATTGT +
Preference number: 4 (lower is better)
Translates to: NGKTMISSSFITKCRGNHGFQTK*SILIYC
Trigger: ACAATAAATGAGGATGGATCACTTGGTTTGAAAACC...GTGGTTTCCTCTACACTTTGTTATGAAACTGCTTGAAATCATAGTTTTCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCAACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPTISPK*DLSGVV
Trigger: AACAACTCCAGATAAGTCCCACTTTGGACTAATAGT...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR GCA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCATTGTCTCTCATCAGTTaGTCAGATACATCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPLSLIS*SDTSVK
Trigger: TTTTACTGATGTATCTGAGCAACTGATGAGAGACAA...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS TCA 90 bp CTTTCATCAATGACGCTGGCCACGGCGGCTTGTGTCACAGAAGGCTaGGAGGCTATGGTGCCCACATTCAGTGCGTACTCCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LSSMTLATAACVTEG*EAMVPTFSAYSLLL
Trigger: CAACAGCAGGGAGTACGCACTGAATGTGGGCACCATAGCCTCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGCGTCATTGATGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 90 bp TGCAGCAAGGATCTCCTGGTGAGGCAAACTTCGATCTTGAAGTACTaGCTCCTGCAGTTCTCCAGACACGGCGGACTGGCCAGACACTCC +
Preference number: 5 (lower is better)
Translates to: CSKDLLVRQTSILKY*LLQFSRHGGLARHS
Trigger: GGAGTGTCTGGCCAGTCCGCCGTGTCTGGAGAACTGCAGGAGTCAGTACTTCAAGATCGAAGTTTGCCTCACCAGGAGATCCTTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 90 bp TCAGTGCCTGGGAATCCAGTATGGATGCTGTGGTGCTTTCATCAATaGCGCTGGCCACGGCGGCTTGTGTCACAGAAGGCTGAGAGGCTA +
Preference number: 5 (lower is better)
Translates to: SVPGNPVWMLWCFHQ*RWPRRLVSQKAERL
Trigger: TAGCCTCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGCGTCATTGATGAAAGCACCACAGCATCCATACTGGATTCCCAGGCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 90 bp CTGCTGTGCACAGGTTTGCTGGGGCCCTCCTGCAAGTTATCCACTTaGTCGATGTCAGCACTGCCTTCTGAGTCCAGTAACGCCTGCTTA +
Preference number: 5 (lower is better)
Translates to: LLCTGLLGPSCKLST*SMSALPSESSNACL
Trigger: TAAGCAGGCGTTACTGGACTCAGAAGGCAGTGCTGACATCGATCAAGTGGATAACTTGCAGGAGGGCCCCAGCAAACCTGTGCACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 90 bp AGTGCATACTGCAGTCCTTGGGGAAGCCGCTCGTGGGTGTCCATCTaGTCTTCGTCATTTTTCACTGTCTCCTCGTGGACCATGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SAYCSPWGSRSWVSI*SSSFFTVSSWTMSS
Trigger: TGAACTCATGGTCCACGAGGAGACAGTGAAAAATGACGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp ATAGGGACATTGAGTGCATACTGCAGTCCTTGGGGAAGCCGCTCGTaGGTGTCCATCTGCTCTTCGTCATTTTTCACTGTCTCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: IGTLSAYCSPWGSRS*VSICSSSFFTVSSW
Trigger: CCACGAGGAGACAGTGAAAAATGACGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 90 bp TGCTGGGGCCCTCCTGCAAGTTATCCACTTGATCGATGTCAGCACTaGCTTCTGAGTCCAGTAACGCCTGCTTATCCACAAGCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: CWGPPASYPLDRCQH*LLSPVTPAYPQAQK
Trigger: CTTTTGAGCTTGTGGATAAGCAGGCGTTACTGGACTCAGAAGGCAGTGCTGACATCGATCAAGTGGATAACTTGCAGGAGGGCCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 90 bp GGCTATGGTGCCCACATTCAGTGCGTACTCCCTGCTGTTGTTACTTaGAGCTTGAAGATACCGCTTCTTCTTCAGAAACTGCATGGCATC +
Preference number: 5 (lower is better)
Translates to: GYGAHIQCVLPAVVT*SLKIPLLLQKLHGI
Trigger: GATGCCATGCAGTTTCTGAAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGGAGTACGCACTGAATGTGGGCACCATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp TCCTGCTTTACACTTATAGGGACATTGAGTGCATACTGCAGTCCTTaGGGAAGCCGCTCGTGGGTGTCCATCTGCTCTTCGTCATTTTTC +
Preference number: 5 (lower is better)
Translates to: SCFTLIGTLSAYCSP*GSRSWVSICSSSFF
Trigger: GAAAAATGACGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGTAAAGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGCTGGCCACGGCGGCTaGTGTCACAGAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPAGHGG*CHRRLR
Trigger: TCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTGGCAGAGGCGTGGTTaGTCTCGTCACCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMWQRRG*SRHLKR
Trigger: CCTTTTCAGGTGACGAGACAAACCACGCCTCTGCCA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGATGGCAGAGGCGTGGTTaGTCTCGTCACCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGWQRRG*SRHLKR
Trigger: CCTTTTCAGGTGACGAGACAAACCACGCCTCTGCCA...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGCCAAAAAGTCTGCTGTaGACGTGGCAGAGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMPKSLL*TWQRRG
Trigger: ACCACGCCTCTGCCACGTCAACAGCAGACTTTTTGG...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS TCA 90 bp AGAACCAACTTGGGTGGGTGTATTTCTCCAGATGCATCTTCTAGGTaGGAGCCTCCCACTGATGAGTGTGGCATCTCAACAGCATACTCT +
Preference number: 5 (lower is better)
Translates to: RTNLGGCISPDASSR*EPPTDECGISTAYS
Trigger: AGAGTATGCTGTTGAGATGCCACACTCATCAGTGGGAGGCTCTCACCTAGAAGATGCATCTGGAGAAATACACCCACCCAAGTTGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 90 bp GACTGGCCAGACACTCCACCCATTACAACCATTGCCCTGGAAGACTaGATTTCGTCTATGCCGCCACATTTAAGAAACAATCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: DWPDTPPITTIALED*ISSMPPHLRNNPSS
Trigger: ACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCAGGGCAATGGTTGTAATGGGTGGAGTGTCTGGCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp GGCTGCATAGACTTGCTTGTCTATGGAAGAGAATGCTGGCGGATTTaGAAGGGTCTGGTTGTCAGTCACAAAGTTAAGGCTCGGGCTATT +
Preference number: 5 (lower is better)
Translates to: GCIDLLVYGRECWRI*KGLVVSHKVKARAI
Trigger: AATAGCCCGAGCCTTAACTTTGTGACTGACAACCAGACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGACAAGCAAGTCTATGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp GATGGGCATGGCTGCATAGACTTGCTTGTCTATGGAAGAGAATGCTaGCGGATTTGGAAGGGTCTGGTTGTCAGTCACAAAGTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: DGHGCIDLLVYGREC*RIWKGLVVSHKVKA
Trigger: AGCCTTAACTTTGTGACTGACAACCAGACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGACAAGCAAGTCTATGCAGCCATGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGAGAATGCTGGCGGATTaGGAAGGGTCTGGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMRMLAD*EGSGCQ
Trigger: CTGACAACCAGACCCTTCCAAATCCGCCAGCATTCT...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGAAGAATGCTGGCGGATTaGGAAGGGTCTGGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGRMLAD*EGSGCQ
Trigger: CTGACAACCAGACCCTTCCAAATCCGCCAGCATTCT...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGCCAAAAAGTCTGCTGTaGACGTGGCAGAGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SACYERTALRTVQHSILQPKSLL*TWQRRG
Trigger: ACCACGCCTCTGCCACGTCAACAGCAGACTTTTTGG...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGCAAAAGTCTGGCCAGTaGTGGCATCTGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMQKSGQ*WHLVKM
Trigger: CATCTTCACCAGATGCCACAACTGGCCAGACTTTTG...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS GCA 90 bp ATCAGTAAAAGTAATTTCCTGCTTTACACTTATAGGGACATTGAGTaGATACTGCAGTCCTTGGGGAAGCCGCTCGTGGGTGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: ISKSNFLLYTYRDIE*ILQSLGKPLVGVHL
Trigger: CAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGTAAAGCAGGAAATTACTTTTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS GCA 90 bp ATTGATGGGCATGGCTGCATAGACTTGCTTGTCTATGGAAGAGAATaGTGGCGGATTTGGAAGGGTCTGGTTGTCAGTCACAAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: IDGHGCIDLLVYGRE*WRIWKGLVVSHKVK
Trigger: CTTAACTTTGTGACTGACAACCAGACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGACAAGCAAGTCTATGCAGCCATGCCCATCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp CCACAAGCTCAAAAGCGTACTTGGAAACTTTGCTGTCTTCATAGCTaGATAGGGGTGAAATGGTTTGACTTTGCTCCAAGGGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: PQAQKRTWKLCCLHS*IGVKWFDFAPRAAS
Trigger: TGAAGCAGCCCTTGGAGCAAAGTCAAACCATTTCACCCCTATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGGTCAGAAGGCCACCTTaGATGGCACATCTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMVRRPP*MAHLFS
Trigger: ACTAAACAGATGTGCCATCAAAGGTGGCCTTCTGAC...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AATGGGAAAACTATGATTTCAAGCAGTTTCATAACAAAGTGTAGAGGAAACCACGCTGGCCACGGCGGCTaGTGTCACAGAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: NGKTMISSSFITKCRGNHAGHGG*CHRRLR
Trigger: TCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGC...GTGGTTTCCTCTACACTTTGTTATGAAACTGCTTGAAATCATAGTTTTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGAAGGATGCTTGGGAGCTaGATCCAACATTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGRMLGS*IQHSLT
Trigger: AGTCAGAGAATGTTGGATCAAGCTCCCAAGCATCCT...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS TCA 90 bp TGTCATCCCAGCTCTATTATCATTTACATTCACCAAGGGAAATTCTaGAAATTCAGCACTTGTCCCTGGTCCCCGAAGGTTCACCTGTCC +
Preference number: 5 (lower is better)
Translates to: CHPSSIIIYIHQGKF*KFSTCPWSPKVHLS
Trigger: GGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp TCGTGGGTGTCCATCTGCTCTTCGTCATTTTTCACTGTCTCCTCGTaGACCATGAGTTCATCATGGGATATCATATCCTGTTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: SWVSICSSSFFTVSS*TMSSSWDIISCCLI
Trigger: AATGAGACAACAGGATATGATATCCCATGATGAACTCATGGTCCACGAGGAGACAGTGAAAAATGACGAAGAGCAGATGGACACCCACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp CTGAGTCCAGTAACGCCTGCTTATCCACAAGCTCAAAAGCGTACTTaGAAACTTTGCTGTCTTCATAGCTGGATAGGGGTGAAATGGTTT +
Preference number: 5 (lower is better)
Translates to: LSPVTPAYPQAQKRT*KLCCLHSWIGVKWF
Trigger: AAACCATTTCACCCCTATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCTTGTGGATAAGCAGGCGTTACTGGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS-3UTR CAA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGCACCCATTACAACCATaGCCCTGGAAGACTGCATTT +
Preference number: 5 (lower is better)
Translates to: SACYERTALRTVQHSILQHPLQP*PWKTAF
Trigger: AAATGCAGTCTTCCAGGGCAATGGTTGTAATGGGTG...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGTTCTTCAGGTCAGATTaGTCCAGCACACTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SACYERTALRTVQHSILQFFRSD*SSTLSL
Trigger: CAAGGAGAGTGTGCTGGACAAATCTGACCTGAAGAA...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGTTTGGAAGGGTCTGGTaGTCAGTCACAAAGTTAAGG +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMFGRVW*SVTKLR
Trigger: CCTTAACTTTGTGACTGACAACCAGACCCTTCCAAA...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGCATGGCTGCATAGACTaGCTTGTCTATGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMHGCID*LVYGRE
Trigger: TTCTCTTCCATAGACAAGCAAGTCTATGCAGCCATG...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCCTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPLKIQH*SLVPEG
Trigger: ACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS GCA 90 bp GTAACGCCTGCTTATCCACAAGCTCAAAAGCGTACTTGGAAACTTTaGTGTCTTCATAGCTGGATAGGGGTGAAATGGTTTGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: VTPAYPQAQKRTWKL*CLHSWIGVKWFDFA
Trigger: AGCAAAGTCAAACCATTTCACCCCTATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCTTGTGGATAAGCAGGCGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp CGTACTTGGAAACTTTGCTGTCTTCATAGCTGGATAGGGGTGAAATaGTTTGACTTTGCTCCAAGGGCTGCTTCAGACTTCTCTTACTAT +
Preference number: 5 (lower is better)
Translates to: RTWKLCCLHSWIGVK*FDFAPRAASDFSYY
Trigger: ATAGTAAGAGAAGTCTGAAGCAGCCCTTGGAGCAAAGTCAAACCATTTCACCCCTATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 90 bp GAAAAGGGAAACGGGTGCTGTGAGTCACCGACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTTCTTAGTGGAGAATTCATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: EKGNGCCESPTISPK*DLSGVVLSGEFIPD
Trigger: ATCAGGAATGAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTCGGTGACTCACAGCACCCGTTTCCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS-3UTR CAA 90 bp GGTAATGCATTTGCTTCTCTAACGGTGACGACACGTAAGGCAGTTCAAGGAATGAGCTCAAAAGCGTACTaGGAAACTTTGCTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GNAFASLTVTTRKAVQGMSSKAY*ETLLSS
Trigger: TGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCT...CATTCCTTGAACTGCCTTACGTGTCGTCACCGTTAGAGAAGCAAATGCATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CTGAGCACTGACTTTTGCAAGGGCCAACTAATTGACATTTGTCCCAAGAACGGAAGCTCAAAAGCGTACTaGGAAACTTTGCTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LSTDFCKGQLIDICPKNGSSKAY*ETLLSS
Trigger: TGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCT...TCCGTTCTTGGGACAAATGTCAATTAGTTGGCCCTTGCAAAAGTCAGTGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTCCCTGCTGTTGTTACTaGCAGCTTGAAGATACCGCT +
Preference number: 5 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVPCCCY*QLEDTA
Trigger: AGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGG...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGCCTGCTGCAGAAACTaGGAGTATTCCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPACCRN*EYSCNM
Trigger: CATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGACTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRLKIQH*SLVPEG
Trigger: ACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS TCA 90 bp TGTCCATCTGCTCTTCGTCATTTTTCACTGTCTCCTCGTGGACCATaGGTTCATCATGGGATATCATATCCTGTTGTCTCATTTCACTCT +
Preference number: 5 (lower is better)
Translates to: CPSALRHFSLSPRGP*VHHGISYPVVSFHS
Trigger: AGAGTGAAATGAGACAACAGGATATGATATCCCATGATGAACTCATGGTCCACGAGGAGACAGTGAAAAATGACGAAGAGCAGATGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 90 bp CTGGAGTTGTTCTTAGTGGAGAATTCATTCCTGATCGAAAGCTATTaGTGGGCATGGCTGCATAGACTTGCTTGTCTATGGAAGAGAATG +
Preference number: 5 (lower is better)
Translates to: LELFLVENSFLIESY*WAWLHRLACLWKRM
Trigger: CATTCTCTTCCATAGACAAGCAAGTCTATGCAGCCATGCCCATCAATAGCTTTCGATCAGGAATGAATTCTCCACTAAGAACAACTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGTCAGAAGGCCACCTTaGATGGCACATCTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPVRRPP*MAHLFS
Trigger: ACTAAACAGATGTGCCATCAAAGGTGGCCTTCTGAC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGAGCCTGCTGCAGAAACTaGGAGTATTCCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRACCRN*EYSCNM
Trigger: CATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGC...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGATTCTTCAGGTCAGATTaGTCCAGCACACTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRFFRSD*SSTLSL
Trigger: CAAGGAGAGTGTGCTGGACAAATCTGACCTGAAGAA...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCAGCTTGCTATGAACGCACTGCTCTTAGAACTGTACAGCACTCCATTTTACAGGGTACATCGGAAGAATaGATTGATATGCTAGAAGTC +
Preference number: 5 (lower is better)
Translates to: SACYERTALRTVQHSILQGTSEE*IDMLEV
Trigger: GACTTCTAGCATATCAATCAATTCTTCCGATGTACC...CTGTAAAATGGAGTGCTGTACAGTTCTAAGAGCAGTGCGTTCATAGCAAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCCATGGCTGCATAGACTaGCTTGTCTATGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPHGCID*LVYGRE
Trigger: TTCTCTTCCATAGACAAGCAAGTCTATGCAGCCATG...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCAAAAGTCTGGCCAGTaGTGGCATCTGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIQKSGQ*WHLVKM
Trigger: CATCTTCACCAGATGCCACAACTGGCCAGACTTTTG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTTTTTGAGAACCAACTaGGGTGGGTGTATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPFLRTN*GGCISP
Trigger: TGGAGAAATACACCCACCCAAGTTGGTTCTCAAAAA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGTTGTTACTTGCAGCTaGAAGATACCGCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPVVTCS*KIPLLL
Trigger: AAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAAC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTGTTGTTACTTGCAGCTaGAAGATACCGCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVVVTCS*KIPLLL
Trigger: AAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAAC...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACCCTGCTGTTGTTACTaGCAGCTTGAAGATACCGCT +
Preference number: 5 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPPCCCY*QLEDTA
Trigger: AGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCAGGATGCTTGGGAGCTaGATCCAACATTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIRMLGS*IQHSLT
Trigger: AGTCAGAGAATGTTGGATCAAGCTCCCAAGCATCCT...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGACAAATAGGCATCGTTTaGGCTAGTTCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRQIGIV*ASSVQS
Trigger: GCTTTGGACAGAACTAGCCAAAACGATGCCTATTTG...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS TCA 90 bp ATTGCAGTGCTCACAAACGTGAGATTTAGGGGTTTTCAAACCAAGTaGTCCATCCTCATTTATTGTAAGGATAGGGACATTGAGTGCATA +
Preference number: 5 (lower is better)
Translates to: IAVLTNVRFRGFQTK*SILIYCKDRDIECI
Trigger: TATGCACTCAATGTCCCTATCCTTACAATAAATGAGGATGGATCACTTGGTTTGAAAACCCCTAAATCTCACGTTTGTGAGCACTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232023.2
CDS-3UTR CAA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACACCCATTACAACCATaGCCCTGGAAGACTGCATTT +
Preference number: 5 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPHPLQP*PWKTAF
Trigger: AAATGCAGTCTTCCAGGGCAATGGTTGTAATGGGTG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCACACTTATAGGGACATaGAGTGCATACTGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIITLIGT*SAYCSP
Trigger: AGGACTGCAGTATGCACTCAATGTCCCTATAAGTGT...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCTCTCTGACTTGTTTTTaGTCTCTCATCAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPSLTCF*SLISCS
Trigger: TGAGCAACTGATGAGAGACAAAAAACAAGTCAGAGA...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CCAATATTTCCACGTAGCTACCCATTCAAGCATAGCATCCCAATTCATTCAGTTTCTCTGACTTGTTTTTaGTCTCTCATCAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: PIFPRSYPFKHSIPIHSVSLTCF*SLISCS
Trigger: TGAGCAACTGATGAGAGACAAAAAACAAGTCAGAGA...AACTGAATGAATTGGGATGCTATGCTTGAATGGGTAGCTACGTGGAAATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGATTTTGCAGGAGAGCGTaGTTTCCGCTTCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRFCRRA*FPLLLF
Trigger: AAAAAGAAGAAGCGGAAACAACGCTCTCCTGCAAAA...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TCTCTTGACATTGAAACTTTAAGTTCACTGTCTGTGACATATCCTCGGATTCCCGAAACGCATGTCACATaGACTACATTGAAACGGTTT +
Preference number: 5 (lower is better)
Translates to: SLDIETLSSLSVTYPRIPETHVT*TTLKRF
Trigger: AAACCGTTTCAATGTAGTCAATGTGACATGCGTTTC...GGGAATCCGAGGATATGTCACAGACAGTGAACTTAAAGTTTCAATGTCAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp ATCCACAAAAATAAAAACCACAGGAGCTACTCAGCTATTCCAAAGCCAATGAGATTTTTGAGAACCAACTaGGGTGGGTGTATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IHKNKNHRSYSAIPKPMRFLRTN*GGCISP
Trigger: TGGAGAAATACACCCACCCAAGTTGGTTCTCAAAAA...TCTCATTGGCTTTGGAATAGCTGAGTAGCTCCTGTGGTTTTTATTTTTGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCCAAATAGGCATCGTTTaGGCTAGTTCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIQIGIV*ASSVQS
Trigger: GCTTTGGACAGAACTAGCCAAAACGATGCCTATTTG...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AATGGGAAAACTATGATTTCAAGCAGTTTCATAACAAAGTGTAGAGGAAACCACACACTTATAGGGACATaGAGTGCATACTGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: NGKTMISSSFITKCRGNHTLIGT*SAYCSP
Trigger: AGGACTGCAGTATGCACTCAATGTCCCTATAAGTGT...GTGGTTTCCTCTACACTTTGTTATGAAACTGCTTGAAATCATAGTTTTCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTTTTGCAGGAGAGCGTaGTTTCCGCTTCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIFCRRA*FPLLLF
Trigger: AAAAAGAAGAAGCGGAAACAACGCTCTCCTGCAAAA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AATGGGAAAACTATGATTTCAAGCAGTTTCATAACAAAGTGTAGAGGAAACCACTTTGGAAGGGTCTGGTaGTCAGTCACAAAGTTAAGG +
Preference number: 5 (lower is better)
Translates to: NGKTMISSSFITKCRGNHFGRVW*SVTKLR
Trigger: CCTTAACTTTGTGACTGACAACCAGACCCTTCCAAA...GTGGTTTCCTCTACACTTTGTTATGAAACTGCTTGAAATCATAGTTTTCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp CACACATCAGTCTTCAGATCGATAATGGCAGAACTTAAAATAGTCACTTCAAAGGAAACGCATGTCACATaGACTACATTGAAACGGTTT +
Preference number: 5 (lower is better)
Translates to: HTSVFRSIMAELKIVTSKETHVT*TTLKRF
Trigger: AAACCGTTTCAATGTAGTCAATGTGACATGCGTTTC...CTTTGAAGTGACTATTTTAAGTTCTGCCATTATCGATCTGAAGACTGATGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCGGTACATCGGAAGAATaGATTGATATGCTAGAAGTC +
Preference number: 5 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIGTSEE*IDMLEV
Trigger: GACTTCTAGCATATCAATCAATTCTTCCGATGTACC...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp TGTCGTGAGCAGTATTCACTTAAATGTAACGTAAGTAAGCAATTAAAATGCCCACTTCTGAGAAGTGACTaGATCCAAAAAGTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: CREQYSLKCNVSKQLKCPLLRSD*IQKVCC
Trigger: ACAGCAGACTTTTTGGATCAAGTCACTTCTCAGAAG...TGGGCATTTTAATTGCTTACTTACGTTACATTTAAGTGAATACTGCTCACGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAGGAATGCTGACTAACCAAACAAAATGCAGTTATTGGATTATCTTTGTCTCTCATCAGTaGCTCAGATACATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: KAVQGMLTNQTKCSYWIIFVSHQ*LRYISK
Trigger: TTTACTGATGTATCTGAGCAACTGATGAGAGACAAA...GATAATCCAATAACTGCATTTTGTTTGGTTAGTCAGCATTCCTTGAACTGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS CAA 72 bp CGGCGGACTGGCCAGACACTCCACCCATTACAACCATaGCCCTGGAAGACTGCATTTCGTCTATGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: RRTGQTLHPLQP*PWKTAFRLCRH
Trigger: GTGGCGGCATAGACGAAATGCAGTCTTCCAGGGCAATGGTTGTAATGGGTGGAGTGTCTGGCCAGTCCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TGTGGTGCTTTCATCAATGACGCTGGCCACGGCGGCTaGTGTCACAGAAGGCTGAGAGGCTATGGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: CGAFINDAGHGG*CHRRLRGYGAH
Trigger: GTGGGCACCATAGCCTCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGCGTCATTGATGAAAGCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp TGCAGTCCTTGGGGAAGCCGCTCGTGGGTGTCCATCTaGTCTTCGTCATTTTTCACTGTCTCCTCGTGGACC +
Preference number: 6 (lower is better)
Translates to: CSPWGSRSWVSI*SSSFFTVSSWT
Trigger: GGTCCACGAGGAGACAGTGAAAAATGACGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 72 bp AGTACTGACTCCTGCAGTTCTCCAGACACGGCGGACTaGCCAGACACTCCACCCATTACAACCATTGCCCTG +
Preference number: 6 (lower is better)
Translates to: STDSCSSPDTAD*PDTPPITTIAL
Trigger: CAGGGCAATGGTTGTAATGGGTGGAGTGTCTGGCCAGTCCGCCGTGTCTGGAGAACTGCAGGAGTCAGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 90 bp TATGGATGCTGTGGTGCTTTCATCAATGACGCTGGCCACGGCGGCTaGTGTCACAGAAGGCTGAGAGGCTATGGTGCCCACATTCAGTGC +
Preference number: 6 (lower is better)
Translates to: YGCCGAFINDAGHGG*CHRRLRGYGAHIQC
Trigger: GCACTGAATGTGGGCACCATAGCCTCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGCGTCATTGATGAAAGCACCACAGCATCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 72 bp GATCTCCTGGTGAGGCAAACTTCGATCTTGAAGTACTaGCTCCTGCAGTTCTCCAGACACGGCGGACTGGCC +
Preference number: 6 (lower is better)
Translates to: DLLVRQTSILKY*LLQFSRHGGLA
Trigger: GGCCAGTCCGCCGTGTCTGGAGAACTGCAGGAGTCAGTACTTCAAGATCGAAGTTTGCCTCACCAGGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 72 bp GGGAATCCAGTATGGATGCTGTGGTGCTTTCATCAATaGCGCTGGCCACGGCGGCTTGTGTCACAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: GNPVWMLWCFHQ*RWPRRLVSQKA
Trigger: AGCCTTCTGTGACACAAGCCGCCGTGGCCAGCGTCATTGATGAAAGCACCACAGCATCCATACTGGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 72 bp GTAAGGATAGGGACATTGAGTGCATACTGCAGTCCTTaGGGAAGCCGCTCGTGGGTGTCCATCTGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: VRIGTLSAYCSP*GSRSWVSICSS
Trigger: CGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232023.2
CDS CCA 72 bp ACACTTATAGGGACATTGAGTGCATACTGCAGTCCTTaGGGAAGCCGCTCGTGGGTGTCCATCTGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: TLIGTLSAYCSP*GSRSWVSICSS
Trigger: CGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS CAA 72 bp CCAAAAAGTCTGCTGTTGACGTGGCAGAGGCGTGGTTaGTCTCGTCACCTGAAAAGGGAAACGGGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PKSLLLTWQRRG*SRHLKRETGAV
Trigger: CACAGCACCCGTTTCCCTTTTCAGGTGACGAGACAAACCACGCCTCTGCCACGTCAACAGCAGACTTTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TGTAAGGATAGGGACATTGAGTGCATACTGCAGTCCTaGGGGAAGCCGCTCGTGGGTGTCCATCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: CKDRDIECILQS*GKPLVGVHLLF
Trigger: GAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATCCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232023.2
CDS TCA 72 bp ACAGGTTTGCTGGGGCCCTCCTGCAAGTTATCCACTTaGTCGATGTCAGCACTGCCTTCTGAGTCCAGTAAC +
Preference number: 6 (lower is better)
Translates to: TGLLGPSCKLST*SMSALPSESSN
Trigger: GTTACTGGACTCAGAAGGCAGTGCTGACATCGATCAAGTGGATAACTTGCAGGAGGGCCCCAGCAAACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp TCCTGCTTTACACTTATAGGGACATTGAGTGCATACTaGAGTCCTTGGGGAAGCCGCTCGTGGGTGTCCATC +
Preference number: 6 (lower is better)
Translates to: SCFTLIGTLSAY*SPWGSRSWVSI
Trigger: GATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGTAAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS CCA 72 bp TTGAGTGCATACTGCAGTCCTTGGGGAAGCCGCTCGTaGGTGTCCATCTGCTCTTCGTCATTTTTCACTGTC +
Preference number: 6 (lower is better)
Translates to: LSAYCSPWGSRS*VSICSSSFFTV
Trigger: GACAGTGAAAAATGACGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TACACTTATAGGGACATTGAGTGCATACTGCAGTCCTaGGGGAAGCCGCTCGTGGGTGTCCATCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: YTYRDIECILQS*GKPLVGVHLLF
Trigger: GAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS CAA 90 bp GGTGCCCACATTCAGTGCGTACTCCCTGCTGTTGTTACTTGCAGCTaGAAGATACCGCTTCTTCTTCAGAAACTGCATGGCATCGTCGTA +
Preference number: 6 (lower is better)
Translates to: GAHIQCVLPAVVTCS*KIPLLLQKLHGIVV
Trigger: TACGACGATGCCATGCAGTTTCTGAAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGGAGTACGCACTGAATGTGGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 72 bp TTGGGTGGGTGTATTTCTCCAGATGCATCTTCTAGGTaGGAGCCTCCCACTGATGAGTGTGGCATCTCAACA +
Preference number: 6 (lower is better)
Translates to: LGGCISPDASSR*EPPTDECGIST
Trigger: TGTTGAGATGCCACACTCATCAGTGGGAGGCTCTCACCTAGAAGATGCATCTGGAGAAATACACCCACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp CCTCCTGCAAGTTATCCACTTGATCGATGTCAGCACTaGCTTCTGAGTCCAGTAACGCCTGCTTATCCACAA +
Preference number: 6 (lower is better)
Translates to: PPASYPLDRCQH*LLSPVTPAYPQ
Trigger: TTGTGGATAAGCAGGCGTTACTGGACTCAGAAGGCAGTGCTGACATCGATCAAGTGGATAACTTGCAGGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp TCATTTATTGTAAGGATAGGGACATTGAGTGCATACTaGAGTCCTTGGGGAAGCCGCTCGTGGGTGTCCATC +
Preference number: 6 (lower is better)
Translates to: SFIVRIGTLSAY*SPWGSRSWVSI
Trigger: GATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATCCTTACAATAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232023.2
CDS GCA 72 bp TCCATCCTCATTTATTGTAAGGATAGGGACATTGAGTaGATACTGCAGTCCTTGGGGAAGCCGCTCGTGGGT +
Preference number: 6 (lower is better)
Translates to: SILIYCKDRDIE*ILQSLGKPLVG
Trigger: ACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATCCTTACAATAAATGAGGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232023.2
CDS CAA 90 bp TTCCTGCTTTACACTTATAGGGACATTGAGTGCATACTGCAGTCCTaGGGGAAGCCGCTCGTGGGTGTCCATCTGCTCTTCGTCATTTTT +
Preference number: 6 (lower is better)
Translates to: FLLYTYRDIECILQS*GKPLVGVHLLFVIF
Trigger: AAAAATGACGAAGAGCAGATGGACACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGTAAAGCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS CAA 90 bp AGGCTATGGTGCCCACATTCAGTGCGTACTCCCTGCTGTTGTTACTaGCAGCTTGAAGATACCGCTTCTTCTTCAGAAACTGCATGGCAT +
Preference number: 6 (lower is better)
Translates to: RLWCPHSVRTPCCCY*QLEDTASSSETAWH
Trigger: ATGCCATGCAGTTTCTGAAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGGAGTACGCACTGAATGTGGGCACCATAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp AGTAATTTCCTGCTTTACACTTATAGGGACATTGAGTaGATACTGCAGTCCTTGGGGAAGCCGCTCGTGGGT +
Preference number: 6 (lower is better)
Translates to: SNFLLYTYRDIE*ILQSLGKPLVG
Trigger: ACCCACGAGCGGCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGTAAAGCAGGAAATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
CDS GCA 72 bp TCGATGTCAGCACTGCCTTCTGAGTCCAGTAACGCCTaGTTATCCACAAGCTCAAAAGCGTACTTGGAAACT +
Preference number: 6 (lower is better)
Translates to: SMSALPSESSNA*LSTSSKAYLET
Trigger: AGTTTCCAAGTACGCTTTTGAGCTTGTGGATAAGCAGGCGTTACTGGACTCAGAAGGCAGTGCTGACATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp GCCCACATTCAGTGCGTACTCCCTGCTGTTGTTACTTaGAGCTTGAAGATACCGCTTCTTCTTCAGAAACTG +
Preference number: 6 (lower is better)
Translates to: AHIQCVLPAVVT*SLKIPLLLQKL
Trigger: CAGTTTCTGAAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGGAGTACGCACTGAATGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 72 bp TCTATGGAAGAGAATGCTGGCGGATTTGGAAGGGTCTaGTTGTCAGTCACAAAGTTAAGGCTCGGGCTATTC +
Preference number: 6 (lower is better)
Translates to: SMEENAGGFGRV*LSVTKLRLGLF
Trigger: GAATAGCCCGAGCCTTAACTTTGTGACTGACAACCAGACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 72 bp GTAACGCCTGCTTATCCACAAGCTCAAAAGCGTACTTaGAAACTTTGCTGTCTTCATAGCTGGATAGGGGTG +
Preference number: 6 (lower is better)
Translates to: VTPAYPQAQKRT*KLCCLHSWIGV
Trigger: CACCCCTATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCTTGTGGATAAGCAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 72 bp GACTTGCTTGTCTATGGAAGAGAATGCTGGCGGATTTaGAAGGGTCTGGTTGTCAGTCACAAAGTTAAGGCT +
Preference number: 6 (lower is better)
Translates to: DLLVYGRECWRI*KGLVVSHKVKA
Trigger: AGCCTTAACTTTGTGACTGACAACCAGACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGACAAGCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TGCCCACATTCAGTGCGTACTCCCTGCTGTTGTTACTaGCAGCTTGAAGATACCGCTTCTTCTTCAGAAACT +
Preference number: 6 (lower is better)
Translates to: CPHSVRTPCCCY*QLEDTASSSET
Trigger: AGTTTCTGAAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGGAGTACGCACTGAATGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp ATGGAAGAGAATGCTGGCGGATTTGGAAGGGTCTGGTaGTCAGTCACAAAGTTAAGGCTCGGGCTATTCAAA +
Preference number: 6 (lower is better)
Translates to: MEENAGGFGRVW*SVTKLRLGLFK
Trigger: TTTGAATAGCCCGAGCCTTAACTTTGTGACTGACAACCAGACCCTTCCAAATCCGCCAGCATTCTCTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TTACATTCACCAAGGGAAATTCTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGTTCACCTGTCCATTGG +
Preference number: 6 (lower is better)
Translates to: LHSPREILKIQH*SLVPEGSPVHW
Trigger: CCAATGGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 90 bp GTCAGTCACAAAGTTAAGGCTCGGGCTATTCAAATAGGCATCGTTTaGGCTAGTTCTGTCCAAAGCCTGCTGCAGAAACTTGGAGTATTC +
Preference number: 6 (lower is better)
Translates to: VSHKVKARAIQIGIV*ASSVQSLLQKLGVF
Trigger: GAATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAACTAGCCAAAACGATGCCTATTTGAATAGCCCGAGCCTTAACTTTGTGACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp GACACTCCACCCATTACAACCATTGCCCTGGAAGACTaGATTTCGTCTATGCCGCCACATTTAAGAAACAAT +
Preference number: 6 (lower is better)
Translates to: DTPPITTIALED*ISSMPPHLRNN
Trigger: ATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCAGGGCAATGGTTGTAATGGGTGGAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 72 bp AAACTTTGCTGTCTTCATAGCTGGATAGGGGTGAAATaGTTTGACTTTGCTCCAAGGGCTGCTTCAGACTTC +
Preference number: 6 (lower is better)
Translates to: KLCCLHSWIGVK*FDFAPRAASDF
Trigger: GAAGTCTGAAGCAGCCCTTGGAGCAAAGTCAAACCATTTCACCCCTATCCAGCTATGAAGACAGCAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CCA 72 bp AACGGGTGCTGTGAGTCACCGACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTTCTTAGTGGAGAATTC +
Preference number: 6 (lower is better)
Translates to: NGCCESPTISPK*DLSGVVLSGEF
Trigger: GAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTCGGTGACTCACAGCACCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 72 bp GCTCTTCGTCATTTTTCACTGTCTCCTCGTGGACCATaGGTTCATCATGGGATATCATATCCTGTTGTCTCA +
Preference number: 6 (lower is better)
Translates to: ALRHFSLSPRGP*VHHGISYPVVS
Trigger: TGAGACAACAGGATATGATATCCCATGATGAACTCATGGTCCACGAGGAGACAGTGAAAAATGACGAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp AAAGTTAAGGCTCGGGCTATTCAAATAGGCATCGTTTaGGCTAGTTCTGTCCAAAGCCTGCTGCAGAAACTT +
Preference number: 6 (lower is better)
Translates to: KVKARAIQIGIV*ASSVQSLLQKL
Trigger: AAGTTTCTGCAGCAGGCTTTGGACAGAACTAGCCAAAACGATGCCTATTTGAATAGCCCGAGCCTTAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 90 bp GATCCAACATTCTCTGACTGGGTGACTTCAGGTACATCGGAAGAATaGATTGATATGCTAGAAGTCACTTCAGTATCTGCAACGCTGAAG +
Preference number: 6 (lower is better)
Translates to: DPTFSDWVTSGTSEE*IDMLEVTSVSATLK
Trigger: CTTCAGCGTTGCAGATACTGAAGTGACTTCTAGCATATCAATCAATTCTTCCGATGTACCTGAAGTCACCCAGTCAGAGAATGTTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 72 bp GGATCTTCTCGTGTCTCTGAAGCAGGTACTTCTGTATaGAACGCATGTCACATTGACTACATTGAAACGGTT +
Preference number: 6 (lower is better)
Translates to: GSSRVSEAGTSV*NACHIDYIETV
Trigger: AACCGTTTCAATGTAGTCAATGTGACATGCGTTTCATACAGAAGTACCTGCTTCAGAGACACGAGAAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 72 bp TTCTTAGTGGAGAATTCATTCCTGATCGAAAGCTATTaGTGGGCATGGCTGCATAGACTTGCTTGTCTATGG +
Preference number: 6 (lower is better)
Translates to: FLVENSFLIESY*WAWLHRLACLW
Trigger: CCATAGACAAGCAAGTCTATGCAGCCATGCCCATCAATAGCTTTCGATCAGGAATGAATTCTCCACTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS GCA 72 bp GCTTATCCACAAGCTCAAAAGCGTACTTGGAAACTTTaGTGTCTTCATAGCTGGATAGGGGTGAAATGGTTT +
Preference number: 6 (lower is better)
Translates to: AYPQAQKRTWKL*CLHSWIGVKWF
Trigger: AAACCATTTCACCCCTATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCTTGTGGATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp CACCGACTATTAGTCCAAAGTGGGACTTATCTGGAGTaGTTCTTAGTGGAGAATTCATTCCTGATCGAAAGC +
Preference number: 6 (lower is better)
Translates to: HRLLVQSGTYLE*FLVENSFLIES
Trigger: GCTTTCGATCAGGAATGAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTCGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TTCTCTGACTGGGTGACTTCAGGTACATCGGAAGAATaGATTGATATGCTAGAAGTCACTTCAGTATCTGCA +
Preference number: 6 (lower is better)
Translates to: FSDWVTSGTSEE*IDMLEVTSVSA
Trigger: TGCAGATACTGAAGTGACTTCTAGCATATCAATCAATTCTTCCGATGTACCTGAAGTCACCCAGTCAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TTTTGGCTAGTTCTGTCCAAAGCCTGCTGCAGAAACTaGGAGTATTCCTGCAACATGTTAGCTTTATCTGAT +
Preference number: 6 (lower is better)
Translates to: FWLVLSKACCRN*EYSCNMLALSD
Trigger: ATCAGATAAAGCTAACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAACTAGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS TCA 72 bp CTCACAAACGTGAGATTTAGGGGTTTTCAAACCAAGTaGTCCATCCTCATTTATTGTAAGGATAGGGACATT +
Preference number: 6 (lower is better)
Translates to: LTNVRFRGFQTK*SILIYCKDRDI
Trigger: AATGTCCCTATCCTTACAATAAATGAGGATGGATCACTTGGTTTGAAAACCCCTAAATCTCACGTTTGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232023.2
CDS CCA 72 bp GGCACATACGTTTATGTTTCAATACACGATCTGTTCTaGAAAAATACTGTAAGCAGTATTCACACTGATAAG +
Preference number: 6 (lower is better)
Translates to: GTYVYVSIHDLF*KNTVSSIHTDK
Trigger: CTTATCAGTGTGAATACTGCTTACAGTATTTTTCCAGAACAGATCGTGTATTGAAACATAAACGTATGTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9
ENSMUST00000232023.2
CDS CAA 72 bp TTTTTCTGTAAGTCTACTGGCTCTCTGACTTGTTTTTaGTCTCTCATCAGTTGCTCAGATACATCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: FFCKSTGSLTCF*SLISCSDTSVK
Trigger: TTTTACTGATGTATCTGAGCAACTGATGAGAGACAAAAAACAAGTCAGAGAGCCAGTAGACTTACAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000089677.7
ENSMUST00000165418.9