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Pregenerated sensors for ZFP146 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037029

Ensembl transcript IDs: ENSMUST00000062181.9

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCACACTGACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTTaGCCGCAGACGACTGTGTTCACAGTTCAGCACTGCTCTGCTTTT +
Preference number: 1 (lower is better)
Translates to: STLTAVTTGLPACHS*PQTTVFTVQHCSAF
Trigger: AAAAGCAGAGCAGTGCTGAACTGTGAACACAGTCGTCTGCGGTCAAGAGTGGCAGGCAGGCAGGCCTGTTGTGACGGCTGTCAGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR GCA 90 bp CCGGTGTTCACGACATCTTCTGTTAAATGTTTGGCTGATTTATGGTaGTTAGCCAGAGTGACCAAACGATGCGCTATGAGGTATAAATTC +
Preference number: 1 (lower is better)
Translates to: PVFTTSSVKCLADLW*LARVTKRCAMRYKF
Trigger: GAATTTATACCTCATAGCGCATCGTTTGGTCACTCTGGCTAAGCACCATAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR CCA 90 bp TCTCCGGTGTTCACGACATCTTCTGTTAAATGTTTGGCTGATTTATaGTGCTTAGCCAGAGTGACCAAACGATGCGCTATGAGGTATAAA +
Preference number: 1 (lower is better)
Translates to: SPVFTTSSVKCLADL*CLARVTKRCAMRYK
Trigger: TTTATACCTCATAGCGCATCGTTTGGTCACTCTGGCTAAGCACCATAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR CAA 90 bp ATCCACACTGACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTaGACCGCAGACGACTGTGTTCACAGTTCAGCACTGCTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: IHTDSRHNRPACLPL*TADDCVHSSALLCF
Trigger: AAAGCAGAGCAGTGCTGAACTGTGAACACAGTCGTCTGCGGTCAAGAGTGGCAGGCAGGCAGGCCTGTTGTGACGGCTGTCAGTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR-3UTR GCA 90 bp ACTGTGTTCACAGTTCAGCACTGCTCTGCTTTTCCACCGCTGCATTCGCTGATTAGAGTGACCAAACGATaGGCTATGAGGTATAAATTC +
Preference number: 2 (lower is better)
Translates to: TVFTVQHCSAFPPLHSLIRVTKR*AMRYKF
Trigger: GAATTTATACCTCATAGCGCATCGTTTGGTCACTCT...AATCAGCGAATGCAGCGGTGGAAAAGCAGAGCAGTGCTGAACTGTGAACACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR CAA 90 bp TTCATTGTGAATTCTCCGGTGTTCACGACATCTTCTGTTAAATGTTaGGCTGATTTATGGTGCTTAGCCAGAGTGACCAAACGATGCGCT +
Preference number: 2 (lower is better)
Translates to: FIVNSPVFTTSSVKC*ADLWCLARVTKRCA
Trigger: AGCGCATCGTTTGGTCACTCTGGCTAAGCACCATAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGGAGAATTCACAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR TCA 72 bp ACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTTaGCCGCAGACGACTGTGTTCACAGTTCAGCACTGC +
Preference number: 3 (lower is better)
Translates to: TAVTTGLPACHS*PQTTVFTVQHC
Trigger: GCAGTGCTGAACTGTGAACACAGTCGTCTGCGGTCAAGAGTGGCAGGCAGGCAGGCCTGTTGTGACGGCTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR GCA 72 bp ACCGCAGACGACTGTGTTCACAGTTCAGCACTGCTCTaGTTTTCCACCGCTGCATTCGCTGATTGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: TADDCVHSSALL*FSTAAFADCRP
Trigger: AGGCCTGCAATCAGCGAATGCAGCGGTGGAAAAGCAGAGCAGTGCTGAACTGTGAACACAGTCGTCTGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR GCA 72 bp GCACTGCTCTGCTTTTCCACCGCTGCATTCGCTGATTaGAGGCCTGTATCATACACATGTCTTTCCCTTCAT +
Preference number: 3 (lower is better)
Translates to: ALLCFSTAAFAD*RPVSYTCLSLH
Trigger: ATGAAGGGAAAGACATGTGTATGATACAGGCCTGCAATCAGCGAATGCAGCGGTGGAAAAGCAGAGCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR GCA 72 bp ACGACATCTTCTGTTAAATGTTTGGCTGATTTATGGTaGTTAGCCAGAGTGACCAAACGATGCGCTATGAGG +
Preference number: 3 (lower is better)
Translates to: TTSSVKCLADLW*LARVTKRCAMR
Trigger: CCTCATAGCGCATCGTTTGGTCACTCTGGCTAAGCACCATAAATCAGCCAAACATTTAACAGAAGATGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR CAA 72 bp GACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTaGACCGCAGACGACTGTGTTCACAGTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: DSRHNRPACLPL*TADDCVHSSAL
Trigger: CAGTGCTGAACTGTGAACACAGTCGTCTGCGGTCAAGAGTGGCAGGCAGGCAGGCCTGTTGTGACGGCTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
CDS-3UTR CCA 90 bp CAGATCCACACTGACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTTGACCGTAAGATTCGATTTGTaGCTGAAGAGTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: QIHTDSRHNRPACLPLLTVRFDL*LKSFPH
Trigger: ATGTGGGAAACTCTTCAGCCACAAATCGAATCTTAC...GGTCAAGAGTGGCAGGCAGGCAGGCCTGTTGTGACGGCTGTCAGTGTGGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
CDS-3UTR TCA 90 bp CTCTGCTTTTCCACCGCTGCATTCGCTGATTGCAGGCCTGTATCATACACATGTGATTCGATTTGTGGCTaGAGAGTTTCCCACATACCT +
Preference number: 4 (lower is better)
Translates to: LCFSTAAFADCRPVSYTCDSICG*RVSHIP
Trigger: AGGTATGTGGGAAACTCTTCAGCCACAAATCGAATC...ACATGTGTATGATACAGGCCTGCAATCAGCGAATGCAGCGGTGGAAAAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
CDS-3UTR TCA 90 bp ATTGTGAATTCTCCGGTGTTCACGACATCTTCTGTTAAATGTTTGGCTGATTTAATGCAGGGCCAGGGTTaGGAACTGAGAAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: IVNSPVFTTSSVKCLADLMQGQG*ELRKGL
Trigger: AAGGCCTTTTCTCAGTTCTCAACCCTGGCCCTGCAT...TAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGGAGAATTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
CDS-3UTR CCA 90 bp TGCAGGCCTGTATCATACACATGTCTTTCCCTTCATTGTGAATTCTCCGGTGTTGGTTTCTCTCTACTATaGAAATGTTCGTGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: CRPVSYTCLSLHCEFSGVGFSLL*KCSCSV
Trigger: TACAGAGCACGAACATTTCCATAGTAGAGAGAAACC...AACACCGGAGAATTCACAATGAAGGGAAAGACATGTGTATGATACAGGCCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
3UTR CAA 72 bp AATTCTCCGGTGTTCACGACATCTTCTGTTAAATGTTaGGCTGATTTATGGTGCTTAGCCAGAGTGACCAAA +
Preference number: 4 (lower is better)
Translates to: NSPVFTTSSVKC*ADLWCLARVTK
Trigger: TTTGGTCACTCTGGCTAAGCACCATAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGGAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
CDS-3UTR CAA 90 bp CAGATCCACACTGACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTTGACCCGCTGCGAGAAGGCCTaGCCGCACTCGTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: QIHTDSRHNRPACLPLLTRCEKA*PHSLHS
Trigger: CGAGTGCAACGAGTGCGGCAAGGCCTTCTCGCAGCG...GGTCAAGAGTGGCAGGCAGGCAGGCCTGTTGTGACGGCTGTCAGTGTGGATCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
CDS-3UTR CAA 90 bp ATTGTGAATTCTCCGGTGTTCACGACATCTTCTGTTAAATGTTTGGCTGATTTACCCGGTGTGGATGTTTaGGTGCTTTATCAGGTACTT +
Preference number: 5 (lower is better)
Translates to: IVNSPVFTTSSVKCLADLPGVDV*VLYQVL
Trigger: AAGTACCTGATAAAGCACCAAAACATCCACACCGGG...TAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGGAGAATTCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9
CDS-3UTR CAA 90 bp ATTGTGAATTCTCCGGTGTTCACGACATCTTCTGTTAAATGTTTGGCTGATTTATCTGTAAGATTCGATTaGTGGCTGAAGAGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: IVNSPVFTTSSVKCLADLSVRFD*WLKSFP
Trigger: TGGGAAACTCTTCAGCCACAAATCGAATCTTACAGA...TAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGGAGAATTCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062181.9