Pregenerated sensors for ZFP141 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092416Ensembl transcript IDs: ENSMUST00000173489.3, ENSMUST00000174407.3
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGAGATTTCTACCTTTGGATCAGCAGGCACCAGGAAGAAAGAATaGCAGTGGGTTTCACTTGAGCATCTGAAACCTCAAGGCCCAATC | + |
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Preference number: 1 (lower is better) Translates to: AEISTFGSAGTRKKE*QWVSLEHLKPQGPI Trigger: GATTGGGCCTTGAGGTTTCAGATGCTCAAGTGAAACCCACTGTCATTCTTTCTTCCTGGTGCCTGCTGATCCAAAGGTAGAAATCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR TCA 90 bp | CAGGCACCAGGAAGAAAGAATGACAGTGGGTTTCACTTGAGCATCTaGAACCTCAAGGCCCAATCCAATGACATACTTCTTCCAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: QAPGRKNDSGFHLSI*NLKAQSNDILLPTK Trigger: TTTTGTTGGAAGAAGTATGTCATTGGATTGGGCCTTGAGGTTTCAGATGCTCAAGTGAAACCCACTGTCATTCTTTCTTCCTGGTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR CCA 90 bp | AACATGACCAAGGCAACTCTTAAAAGAACAATATTTAATCAAAGCTaGCTTACAGGTTCAGAGACTCAGAGCATAATCAAGAGAGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: NMTKATLKRTIFNQS*LTGSETQSIIKRES Trigger: ACTTTCTCTCTTGATTATGCTCTGAGTCTCTGAACCTGTAAGCCAGCTTTGATTAAATATTGTTCTTTTAAGAGTTGCCTTGGTCATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR CCA 90 bp | ACACCTCCTAGTTGTGTACTCCCTCAGCCAAGCATATTCAAACCACCACACTGGACAAAACATACTTCTTaGGTGAACAGTGTATCAGTA | + |
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Preference number: 2 (lower is better) Translates to: TPPSCVLPQPSIFKPPHWTKHTS*VNSVSV Trigger: TACTGATACACTGTTCACCCAAGAAGTATGTTTTGT...CCAGTGTGGTGGTTTGAATATGCTTGGCTGAGGGAGTACACAACTAGGAGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATAGACTGGCTCCCAGATaGCTAGAAAGAGGGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LVRVSFAVERHHNYSNSYRLAPR*LERGSQ Trigger: TTGAGACCCTCTTTCTAGTCATCTGGGAGCCAGTCT...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR TCA 90 bp | GTGAATATATTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTCGGCACAGGAGGAGCTaGGAGTTCTACATTTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VNILVRVSFAVERHHNYSRHRRS*EFYILF Trigger: GAACAAAATGTAGAACTCTCAGCTCCTCCTGTGCCG...ACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAATATATTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR GCA 90 bp | GTGAATATATTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTTTATTTTGGCTGACTTaGAGATGCAGAGTTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: VNILVRVSFAVERHHNYSLFWLT*RCRVFA Trigger: TGCAAAAACTCTGCATCTGCAAGTCAGCCAAAATAA...ACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAATATATTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTATATGTCTGTGTATGCTATTTTCAGTCAAACCACCAGAGTGAATATAAGAATATTTAATCAAAGCTaGCTTACAGGTTCAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: PYMSVYAIFSQTTRVNIRIFNQS*LTGSET Trigger: AGTCTCTGAACCTGTAAGCCAGCTTTGATTAAATAT...TCTTATATTCACTCTGGTGGTTTGACTGAAAATAGCATACACAGACATATAGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR GCA 90 bp | GTGAATATATTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTCTATATGTCTGTGTATaGTATTTTCAGTCAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: VNILVRVSFAVERHHNYSLYVCV*YFQSNH Trigger: GTGGTTTGACTGAAAATAGCATACACAGACATATAG...ACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAATATATTCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR TCA 72 bp | ACAGCAGGGTCCAGGCAGGTACGGCACAGGAGGAGCTaGGAGTTCTACATTTTGTTCAGGAGGCAAACAGTA | + |
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Preference number: 3 (lower is better) Translates to: TAGSRQVRHRRS*EFYILFRRQTV Trigger: TACTGTTTGCCTCCTGAACAAAATGTAGAACTCTCAGCTCCTCCTGTGCCGTACCTGCCTGGACCCTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR TCA 72 bp | AGGCACCAGGAAGAAAGAATGACAGTGGGTTTCACTTaGGCATCTGAAACCTCAAGGCCCAATCCAATGACA | + |
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Preference number: 3 (lower is better) Translates to: RHQEERMTVGFT*ASETSRPNPMT Trigger: TGTCATTGGATTGGGCCTTGAGGTTTCAGATGCTCAAGTGAAACCCACTGTCATTCTTTCTTCCTGGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR TCA 72 bp | TCTACCTTTGGATCAGCAGGCACCAGGAAGAAAGAATaGCAGTGGGTTTCACTTGAGCATCTGAAACCTCAA | + |
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Preference number: 3 (lower is better) Translates to: STFGSAGTRKKE*QWVSLEHLKPQ Trigger: TTGAGGTTTCAGATGCTCAAGTGAAACCCACTGTCATTCTTTCTTCCTGGTGCCTGCTGATCCAAAGGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR CAA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATCTGAGATTTCTACCTTaGGATCAGCAGGCACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LVRVSFAVERHHNYSNSYLRFLP*DQQAPG Trigger: TCCTGGTGCCTGCTGATCCAAAGGTAGAAATCTCAG...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR-3UTR CAA 90 bp | GTGAATATATTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAATATAAGATGCATTTaGGGGTGTCTTAAGGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: VNILVRVSFAVERHHNYSNIRCI*GCLKVS Trigger: GGAAACCTTAAGACACCCCAAAATGCATCTTATATT...ACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAATATATTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR CCA 72 bp | AAGGCAACTCTTAAAAGAACAATATTTAATCAAAGCTaGCTTACAGGTTCAGAGACTCAGAGCATAATCAAG | + |
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Preference number: 3 (lower is better) Translates to: KATLKRTIFNQS*LTGSETQSIIK Trigger: CTTGATTATGCTCTGAGTCTCTGAACCTGTAAGCCAGCTTTGATTAAATATTGTTCTTTTAAGAGTTGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | AGCAGGGTCCAGGCAGGTACGGCACAGGAGGAGCTGAGAGTTCTACATTTTGTTCTGCTGGTACAAAGGTaGTTGTGTGCACTGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: SRVQAGTAQEELRVLHFVLLVQR*LCALTR Trigger: TCTGGTCAGTGCACACAATCACCTTTGTACCAGCAG...AACAAAATGTAGAACTCTCAGCTCCTCCTGTGCCGTACCTGCCTGGACCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | ACACCTCCTAGTTGTGTACTCCCTCAGCCAAGCATATTCAAACCACCACACTGGGGCGTTCCTCCAGGTTaGAGCATCTTAAGTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: TPPSCVLPQPSIFKPPHWGVPPG*SILSLL Trigger: CAGTAGACTTAAGATGCTTCAACCTGGAGGAACGCC...CCAGTGTGGTGGTTTGAATATGCTTGGCTGAGGGAGTACACAACTAGGAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | ACACCTCCTAGTTGTGTACTCCCTCAGCCAAGCATATTCAAACCACCACACTGGACTGCTGGCTGCTTGTaGACAGCTTCTCTTGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: TPPSCVLPQPSIFKPPHWTAGCL*TASLGY Trigger: ATAGCCAAGAGAAGCTGTCCACAAGCAGCCAGCAGT...CCAGTGTGGTGGTTTGAATATGCTTGGCTGAGGGAGTACACAACTAGGAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | AGCAGGGTCCAGGCAGGTACGGCACAGGAGGAGCTGAGAGTTCTACATTTTGTTGTATGGATTCTGTGGTaGGATTTAAGAGATGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SRVQAGTAQEELRVLHFVVWILW*DLRDEP Trigger: GGGCTCATCTCTTAAATCCCACCACAGAATCCATAC...AACAAAATGTAGAACTCTCAGCTCCTCCTGTGCCGTACCTGCCTGGACCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | AGCAGGGTCCAGGCAGGTACGGCACAGGAGGAGCTGAGAGTTCTACATTTTGTTTTCCTATATTTTTGTTaGACAAAGGATCTCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SRVQAGTAQEELRVLHFVFLYFC*TKDLGC Trigger: GCATCCGAGATCCTTTGTTCAACAAAAATATAGGAA...AACAAAATGTAGAACTCTCAGCTCCTCCTGTGCCGTACCTGCCTGGACCCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | ACACCTCCTAGTTGTGTACTCCCTCAGCCAAGCATATTCAAACCACCACACTGGGTAACTTTCCAAGCCTaGAACTTCCAAATTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TPPSCVLPQPSIFKPPHWVTFQA*NFQIVL Trigger: CAGGACAATTTGGAAGTTCCAGGCTTGGAAAGTTAC...CCAGTGTGGTGGTTTGAATATGCTTGGCTGAGGGAGTACACAACTAGGAGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | ACACCTCCTAGTTGTGTACTCCCTCAGCCAAGCATATTCAAACCACCACACTGGCCTTTATTATCTTCCTaGTATCTGTGGCAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TPPSCVLPQPSIFKPPHWPLLSS*YLWQYS Trigger: TGAATACTGCCACAGATATCAGGAAGATAATAAAGG...CCAGTGTGGTGGTTTGAATATGCTTGGCTGAGGGAGTACACAACTAGGAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | CAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAAGACCACACTTCCAAATTGTCCTaGTCCTTCTCTCTGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QSNDILLPTKPHLLQQDHTSKLS*SFSLGR Trigger: TCTGCCCAGAGAGAAGGACCAGGACAATTTGGAAGT...GTGGTCTTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | GTGAATATATTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTGGTGATTGTGTGCACTaGCCAGAGACACCCCTACAT | + |
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Preference number: 4 (lower is better) Translates to: VNILVRVSFAVERHHNYSGDCVH*PETPLH Trigger: ATGTAGGGGTGTCTCTGGTCAGTGCACACAATCACC...ACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAATATATTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR GCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATACAAAGGTGATTGTGTaGACTGACCAGAGACACCCC | + |
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Preference number: 4 (lower is better) Translates to: LVRVSFAVERHHNYSNSYTKVIV*TDQRHP Trigger: GGGGTGTCTCTGGTCAGTGCACACAATCACCTTTGT...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATCCTGGTCCTTCTCTCTaGGCAGATTCTTGTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LVRVSFAVERHHNYSNSYPGPSL*ADSCLL Trigger: GAGCAAACAAGAATCTGCCCAGAGAGAAGGACCAGG...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCCAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAACCTGTATGGATTCTGTaGTGGGTTTTAAGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KAQSNDILLPTKPHLLQQPVWIL*WVLRVE Trigger: CTCAACTCTTAAAACCCACCACAGAATCCATACAGG...TTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTGGGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATATTCTGCAGTGGCTTTaGAGATGTGAGCTCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LVRVSFAVERHHNYSNSYILQWL*RCELWV Trigger: TACCCAGAGCTCACATCTTCAAAGCCACTGCAGAAT...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCCAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAAGTATGGATTTTGAGGTaGGTTTTAAGAGTTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KAQSNDILLPTKPHLLQQVWILR*VLRVEP Trigger: AGGCTCAACTCTTAAAACCCACCTCAAAATCCATAC...TTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTGGGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR GCA 90 bp | CAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAAGACCACCTGTTGTGGTTATTATaGAGTGCAAAGTCTGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: QSNDILLPTKPHLLQQDHLLWLL*SAKSVV Trigger: TACTACAGACTTTGCACTGCATAATAACCACAACAG...GTGGTCTTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR GCA 90 bp | CCCTATATGTCTGTGTATGCTATTTTCAGTCAAACCACCAGAGTGAATATAAGACTCCTGTATGGATTCTaGAGTGGCTTTGAAGATGTG | + |
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Preference number: 4 (lower is better) Translates to: PYMSVYAIFSQTTRVNIRLLYGF*SGFEDV Trigger: CACATCTTCAAAGCCACTGCAGAATCCATACAGGAG...TCTTATATTCACTCTGGTGGTTTGACTGAAAATAGCATACACAGACATATAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATGCAATTTTATACTGCTaGCTGCTTGTGGACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LVRVSFAVERHHNYSNSYAILYC*LLVDSF Trigger: GAAGCTGTCCACAAGCAGCCAGCAGTATAAAATTGC...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATGGTCTGAAGAACTTCTaGAGCATTTCCCAGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: LVRVSFAVERHHNYSNSYGLKNF*SISQIS Trigger: GGAAATCTGGGAAATGCTCCAGAAGTTCTTCAGACC...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | CCCTATATGTCTGTGTATGCTATTTTCAGTCAAACCACCAGAGTGAATATAAGAAACAGTTCCTTGTTATaGAAGCAAGACAGGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: PYMSVYAIFSQTTRVNIRNSSLL*KQDRTG Trigger: ACCAGTCCTGTCTTGCTTTCATAACAAGGAACTGTT...TCTTATATTCACTCTGGTGGTTTGACTGAAAATAGCATACACAGACATATAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | CCCTATATGTCTGTGTATGCTATTTTCAGTCAAACCACCAGAGTGAATATAAGAATTCTCTCTGTAGCCTaGGAACTGAGAAAAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: PYMSVYAIFSQTTRVNIRILSVA*ELRKGL Trigger: AAGTCCTTTTCTCAGTTCTCAGGCTACAGAGAGAAT...TCTTATATTCACTCTGGTGGTTTGACTGAAAATAGCATACACAGACATATAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| 3UTR CAA 72 bp | TTCAGTCAAACCACCAGAGTGAATATAAGATGCATTTaGGGGTGTCTTAAGGTTTCCATTGCTGTGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: FSQTTRVNIRCI*GCLKVSIAVKR Trigger: TCTTTTCACAGCAATGGAAACCTTAAGACACCCCAAAATGCATCTTATATTCACTCTGGTGGTTTGACTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATTTTGTTCAAGATAGGTaGGTAGCTCTGGTTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: LVRVSFAVERHHNYSNSYFVQDR*VALVLI Trigger: TATCAAAACCAGAGCTACTCACCTATCTTGAACAAA...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR TCA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATGAAATCTCTGTAAACTaGCTGTTGTGGTTATTATGC | + |
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Preference number: 4 (lower is better) Translates to: LVRVSFAVERHHNYSNSYEISVN*LLWLLC Trigger: GCATAATAACCACAACAGTCAGTTTACAGAGATTTC...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | AGCAGGGTCCAGGCAGGTACGGCACAGGAGGAGCTGAGAGTTCTACATTTTGTTTGGGCAGATTCTTGTTaGCTCTCTATTTTGAACAGT | + |
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Preference number: 5 (lower is better) Translates to: SRVQAGTAQEELRVLHFVWADSC*LSILNS Trigger: ACTGTTCAAAATAGAGAGCAAACAAGAATCTGCCCA...AACAAAATGTAGAACTCTCAGCTCCTCCTGTGCCGTACCTGCCTGGACCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | CAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAAGACCACTATACTGCTGGCTGCTaGTGGACAGCTTCTCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: QSNDILLPTKPHLLQQDHYTAGC*WTASLG Trigger: GCCAAGAGAAGCTGTCCACAAGCAGCCAGCAGTATA...GTGGTCTTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 90 bp | GCTTGTGGACAGCTTCTCTTGGCTATAATCCTGCTGGTACAAAGGTaGTTGTGTGCACTGACCAGAGACACCCCTACATCTATCATTATT | + |
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Preference number: 5 (lower is better) Translates to: ACGQLLLAIILLVQR*LCALTRDTPTSIII Trigger: AATAATGATAGATGTAGGGGTGTCTCTGGTCAGTGCACACAATCACCTTTGTACCAGCAGGATTATAGCCAAGAGAAGCTGTCCACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 90 bp | GTCCTGGTCCTTCTCTCTGGGCAGATTCTTGTTTGCTCTCTATTTTaGACAGTTCCTTGTTATGAAAGCAAGACAGGACTGGTTCTATGC | + |
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Preference number: 5 (lower is better) Translates to: VLVLLSGQILVCSLF*TVPCYESKTGLVLC Trigger: GCATAGAACCAGTCCTGTCTTGCTTTCATAACAAGGAACTGTTCAAAATAGAGAGCAAACAAGAATCTGCCCAGAGAGAAGGACCAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 90 bp | GCATGGCGTTCCTCCAGGTTGAAGCATCTTAAGTCTACTGAGGTCTaGAGAACTTCTGGAGCATTTCCCAGATTTCCTATATTTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: AWRSSRLKHLKSTEV*RTSGAFPRFPIFLL Trigger: CAACAAAAATATAGGAAATCTGGGAAATGCTCCAGAAGTTCTTCAGACCTCAGTAGACTTAAGATGCTTCAACCTGGAGGAACGCCATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CCA 90 bp | AACTTTCCAAGCCTGGAACTTCCAAATTGTCCTGGTCCTTCTCTCTaGGCAGATTCTTGTTTGCTCTCTATTTTGAACAGTTCCTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: NFPSLELPNCPGPSL*ADSCLLSILNSSLL Trigger: TAACAAGGAACTGTTCAAAATAGAGAGCAAACAAGAATCTGCCCAGAGAGAAGGACCAGGACAATTTGGAAGTTCCAGGCTTGGAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATCCTATCTTTAGGAAGTaGGAGGACCTGATGACCACC | + |
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Preference number: 5 (lower is better) Translates to: LVRVSFAVERHHNYSNSYPIFRK*EDLMTT Trigger: GGTGGTCATCAGGTCCTCCAACTTCCTAAAGATAGG...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | AAGGCCCAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAATCTATGGCCACGTCTTaGAAAGTTAACAGACCGTTA | + |
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Preference number: 5 (lower is better) Translates to: KAQSNDILLPTKPHLLQQSMATS*KVNRPL Trigger: TAACGGTCTGTTAACTTTCAAAGACGTGGCCATAGA...TTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTGGGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CCA 90 bp | TACAATTTGAGCACTCATTTGCAATTTTATACTGCTGGCTGCTTGTaGACAGCTTCTCTTGGCTATAATCCTGCTGGTACAAAGGTGATT | + |
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Preference number: 5 (lower is better) Translates to: YNLSTHLQFYTAGCL*TASLGYNPAGTKVI Trigger: AATCACCTTTGTACCAGCAGGATTATAGCCAAGAGAAGCTGTCCACAAGCAGCCAGCAGTATAAAATTGCAAATGAGTGCTCAAATTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | AAGGCCCAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAATCTCTGGGCAGATTCTaGTTTGCTCTCTATTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: KAQSNDILLPTKPHLLQQSLGRF*FALYFE Trigger: TTCAAAATAGAGAGCAAACAAGAATCTGCCCAGAGA...TTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTGGGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATTGTGGACAGCTTCTCTaGGCTATAATCCTGCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: LVRVSFAVERHHNYSNSYCGQLL*AIILLV Trigger: TACCAGCAGGATTATAGCCAAGAGAAGCTGTCCACA...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | CCCTATATGTCTGTGTATGCTATTTTCAGTCAAACCACCAGAGTGAATATAAGACTCTGGGTAAAGGACTaGCCACAATCTGTGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: PYMSVYAIFSQTTRVNIRLWVKD*PQSVHL Trigger: CAAATGCACAGATTGTGGCAAGTCCTTTACCCAGAG...TCTTATATTCACTCTGGTGGTTTGACTGAAAATAGCATACACAGACATATAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATGCTCTGGTTTTGATATaGAAAGACCCACAGAGACCA | + |
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Preference number: 5 (lower is better) Translates to: LVRVSFAVERHHNYSNSYALVLI*KDPQRP Trigger: TGGTCTCTGTGGGTCTTTCAATATCAAAACCAGAGC...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | CAATCCAATGACATACTTCTTCCAACAAAACCACACCTACTCCAACAAGACCACAATTTGAGCACTCATTaGCAATTTTATACTGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QSNDILLPTKPHLLQQDHNLSTH*QFYTAG Trigger: GCCAGCAGTATAAAATTGCAAATGAGTGCTCAAATT...GTGGTCTTGTTGGAGTAGGTGTGGTTTTGTTGGAAGAAGTATGTCATTGGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 90 bp | GTTAAATTCTCTTCTAGCCTTAATTTCAGTACACTGACTACAATTTaGGCACTCATTTGCAATTTTATACTGCTGGCTGCTTGTGGACAG | + |
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Preference number: 5 (lower is better) Translates to: VKFSSSLNFSTLTTI*ALICNFILLAACGQ Trigger: CTGTCCACAAGCAGCCAGCAGTATAAAATTGCAAATGAGTGCTCAAATTGTAGTCAGTGTACTGAAATTAAGGCTAGAAGAGAATTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS-3UTR CAA 90 bp | TTAGTTAGGGTTTCTTTTGCTGTGGAGAGACATCATAACTACAGTAACTCCTATTATCCCTATCAATGCTaGGTGATTCAACAGAGACTT | + |
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Preference number: 5 (lower is better) Translates to: LVRVSFAVERHHNYSNSYYPYQC*VIQQRL Trigger: AAGTCTCTGTTGAATCACCAAGCATTGATAGGGATA...ATAGGAGTTACTGTAGTTATGATGTCTCTCCACAGCAAAAGAAACCCTAACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS GCA 90 bp | TTGGTAAGAAATCTCTGTAAACTGACTGTTGTGGTTATTATGCAGTaGAAAGTCTGTAGTAAGGCCTTTATTATCTTCCTGATATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LVRNLCKLTVVVIMQ*KVCSKAFIIFLISV Trigger: CACAGATATCAGGAAGATAATAAAGGCCTTACTACAGACTTTGCACTGCATAATAACCACAACAGTCAGTTTACAGAGATTTCTTACCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 90 bp | TATCTCTGTCTGTTAAATTCTCTTCTAGCCTTAATTTCAGTACACTaGCTACAATTTGAGCACTCATTTGCAATTTTATACTGCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: YLCLLNSLLALISVH*LQFEHSFAILYCWL Trigger: CAGCCAGCAGTATAAAATTGCAAATGAGTGCTCAAATTGTAGTCAGTGTACTGAAATTAAGGCTAGAAGAGAATTTAACAGACAGAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS GCA 90 bp | ACAGGCATGGTTTTCTTTGAATATCATTTACCTTATCCCTATCAATaGTTGGTGATTCAACAGAGACTTTGCTGTACTTATCATATCTCT | + |
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Preference number: 5 (lower is better) Translates to: TGMVFFEYHLPYPYQ*LVIQQRLCCTYHIS Trigger: AGAGATATGATAAGTACAGCAAAGTCTCTGTTGAATCACCAAGCATTGATAGGGATAAGGTAAATGATATTCAAAGAAAACCATGCCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 72 bp | CAGCTTCTCTTGGCTATAATCCTGCTGGTACAAAGGTaGTTGTGTGCACTGACCAGAGACACCCCTACATCT | + |
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Preference number: 6 (lower is better) Translates to: QLLLAIILLVQR*LCALTRDTPTS Trigger: AGATGTAGGGGTGTCTCTGGTCAGTGCACACAATCACCTTTGTACCAGCAGGATTATAGCCAAGAGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 72 bp | CCACATTCTGTAGATTTGCATGGCGTTCCTCCAGGTTaGAGCATCTTAAGTCTACTGAGGTCTGAAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: PHSVDLHGVPPG*SILSLLRSEEL Trigger: AAGTTCTTCAGACCTCAGTAGACTTAAGATGCTTCAACCTGGAGGAACGCCATGCAAATCTACAGAATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CCA 72 bp | AGCCTGGAACTTCCAAATTGTCCTGGTCCTTCTCTCTaGGCAGATTCTTGTTTGCTCTCTATTTTGAACAGT | + |
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Preference number: 6 (lower is better) Translates to: SLELPNCPGPSL*ADSCLLSILNS Trigger: ACTGTTCAAAATAGAGAGCAAACAAGAATCTGCCCAGAGAGAAGGACCAGGACAATTTGGAAGTTCCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CCA 72 bp | AGCACTCATTTGCAATTTTATACTGCTGGCTGCTTGTaGACAGCTTCTCTTGGCTATAATCCTGCTGGTACA | + |
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Preference number: 6 (lower is better) Translates to: STHLQFYTAGCL*TASLGYNPAGT Trigger: TGTACCAGCAGGATTATAGCCAAGAGAAGCTGTCCACAAGCAGCCAGCAGTATAAAATTGCAAATGAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CAA 72 bp | TTGAGCACTCATTTGCAATTTTATACTGCTGGCTGCTaGTGGACAGCTTCTCTTGGCTATAATCCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LSTHLQFYTAGC*WTASLGYNPAG Trigger: ACCAGCAGGATTATAGCCAAGAGAAGCTGTCCACAAGCAGCCAGCAGTATAAAATTGCAAATGAGTGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CAA 90 bp | GACTACAATTTGAGCACTCATTTGCAATTTTATACTGCTGGCTGCTaGTGGACAGCTTCTCTTGGCTATAATCCTGCTGGTACAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: DYNLSTHLQFYTAGC*WTASLGYNPAGTKV Trigger: CACCTTTGTACCAGCAGGATTATAGCCAAGAGAAGCTGTCCACAAGCAGCCAGCAGTATAAAATTGCAAATGAGTGCTCAAATTGTAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 72 bp | TCCTCCAGGTTGAAGCATCTTAAGTCTACTGAGGTCTaGAGAACTTCTGGAGCATTTCCCAGATTTCCTATA | + |
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Preference number: 6 (lower is better) Translates to: SSRLKHLKSTEV*RTSGAFPRFPI Trigger: TATAGGAAATCTGGGAAATGCTCCAGAAGTTCTTCAGACCTCAGTAGACTTAAGATGCTTCAACCTGGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CAA 72 bp | ACTTCTGGAGCATTTCCCAGATTTCCTATATTTTTGTaGAACAAAGGATCTCGGATGCCCAACAAGTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: TSGAFPRFPIFL*NKGSRMPNKFR Trigger: TCGAAACTTGTTGGGCATCCGAGATCCTTTGTTCAACAAAAATATAGGAAATCTGGGAAATGCTCCAGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 72 bp | TTGCAATGTAGGGTTCTTCATTTTGTTCAAGATAGGTaGGTAGCTCTGGTTTTGATATTGAAAGACCCACAG | + |
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Preference number: 6 (lower is better) Translates to: LQCRVLHFVQDR*VALVLILKDPQ Trigger: CTGTGGGTCTTTCAATATCAAAACCAGAGCTACTCACCTATCTTGAACAAAATGAAGAACCCTACATTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173489.3 ENSMUST00000174407.3 |
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| CDS TCA 72 bp | TCTTGTTTGCTCTCTATTTTGAACAGTTCCTTGTTATaGAAGCAAGACAGGACTGGTTCTATGCCTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SCLLSILNSSLL*KQDRTGSMPFA Trigger: TGCAAAAGGCATAGAACCAGTCCTGTCTTGCTTTCATAACAAGGAACTGTTCAAAATAGAGAGCAAACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 72 bp | AGTGCAAAGTCTGTAGTAAGGCCTTTATTATCTTCCTaGTATCTGTGGCAGTATTCAGAAATACCCAACCAA | + |
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Preference number: 6 (lower is better) Translates to: SAKSVVRPLLSS*YLWQYSEIPNQ Trigger: TTGGTTGGGTATTTCTGAATACTGCCACAGATATCAGGAAGATAATAAAGGCCTTACTACAGACTTTGCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS GCA 72 bp | GTTCCTTGTTATGAAAGCAAGACAGGACTGGTTCTATaGCTTTTGCAATGTAGGGTTCTTCATTTTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: VPCYESKTGLVL*LLQCRVLHFVQ Trigger: TTGAACAAAATGAAGAACCCTACATTGCAAAAGGCATAGAACCAGTCCTGTCTTGCTTTCATAACAAGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173489.3 ENSMUST00000174407.3 |
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| CDS CCA 72 bp | TTTGAACAGTTCCTTGTTATGAAAGCAAGACAGGACTaGTTCTATGCCTTTTGCAATGTAGGGTTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: FEQFLVMKARQD*FYAFCNVGFFI Trigger: AATGAAGAACCCTACATTGCAAAAGGCATAGAACCAGTCCTGTCTTGCTTTCATAACAAGGAACTGTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CCA 72 bp | AGAAATACCCAACCAATGATGGCTTTCACGTCCTACTaGATTCTCATACACAGTCTTATGTTGATCTACATT | + |
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Preference number: 6 (lower is better) Translates to: RNTQPMMAFTSY*ILIHSLMLIYI Trigger: AATGTAGATCAACATAAGACTGTGTATGAGAATCCAGTAGGACGTGAAAGCCATCATTGGTTGGGTATTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CAA 72 bp | TGTTATGAAAGCAAGACAGGACTGGTTCTATGCCTTTaGCAATGTAGGGTTCTTCATTTTGTTCAAGATAGG | + |
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Preference number: 6 (lower is better) Translates to: CYESKTGLVLCL*QCRVLHFVQDR Trigger: CCTATCTTGAACAAAATGAAGAACCCTACATTGCAAAAGGCATAGAACCAGTCCTGTCTTGCTTTCATAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173489.3 ENSMUST00000174407.3 |
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| CDS CAA 72 bp | AGAACTTCTGGAGCATTTCCCAGATTTCCTATATTTTaGTTGAACAAAGGATCTCGGATGCCCAACAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: RTSGAFPRFPIF*LNKGSRMPNKF Trigger: AAACTTGTTGGGCATCCGAGATCCTTTGTTCAACAAAAATATAGGAAATCTGGGAAATGCTCCAGAAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS TCA 72 bp | TCTTCTAGCCTTAATTTCAGTACACTGACTACAATTTaGGCACTCATTTGCAATTTTATACTGCTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSLNFSTLTTI*ALICNFILLAA Trigger: AGCAGCCAGCAGTATAAAATTGCAAATGAGTGCTCAAATTGTAGTCAGTGTACTGAAATTAAGGCTAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS GCA 72 bp | AATCTCTGTAAACTGACTGTTGTGGTTATTATGCAGTaGAAAGTCTGTAGTAAGGCCTTTATTATCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: NLCKLTVVVIMQ*KVCSKAFIIFL Trigger: CAGGAAGATAATAAAGGCCTTACTACAGACTTTGCACTGCATAATAACCACAACAGTCAGTTTACAGAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CAA 90 bp | ACTAGGAGTTACATCTTGTTTATAGATATTCCAGGAGTCGTTACCTaGGTAAGAAATCTCTGTAAACTGACTGTTGTGGTTATTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: TRSYILFIDIPGVVT*VRNLCKLTVVVIMQ Trigger: CTGCATAATAACCACAACAGTCAGTTTACAGAGATTTCTTACCAAGGTAACGACTCCTGGAATATCTATAAACAAGATGTAACTCCTAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CAA 90 bp | GGCATGGTTTTCTTTGAATATCATTTACCTTATCCCTATCAATGCTaGGTGATTCAACAGAGACTTTGCTGTACTTATCATATCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GMVFFEYHLPYPYQC*VIQQRLCCTYHISV Trigger: GACAGAGATATGATAAGTACAGCAAAGTCTCTGTTGAATCACCAAGCATTGATAGGGATAAGGTAAATGATATTCAAAGAAAACCATGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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| CDS CAA 72 bp | ACAATTACTTATCTGTCCTTCACTAGGAGTTACATCTaGTTTATAGATATTCCAGGAGTCGTTACCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: TITYLSFTRSYI*FIDIPGVVTLV Trigger: TACCAAGGTAACGACTCCTGGAATATCTATAAACAAGATGTAACTCCTAGTGAAGGACAGATAAGTAATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174407.3 |
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