Pregenerated sensors for ZFP14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053985Ensembl transcript IDs: ENSMUST00000077787.8, ENSMUST00000207072.2, ENSMUST00000207873.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTTGGTCAAGTGTTAACTACTTTATCCTTAAGTCAGTGCTGTTGTaGAGTACAGCAGGTGGGCTCTACCCTGGGCCTCACTCACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SWSSVNYFILKSVLL*STAGGLYPGPHSPA Trigger: GGCTGGTGAGTGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTAGTTAACACTTGACCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR TCA 90 bp | GCCATCCAGAAACTGAGAATCCCAGTGGATCAGCTCTTAAGGAAATaGATTCAGGTGTCTAACCTGTTCCCTCCAATGTGGATCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: AIQKLRIPVDQLLRK*IQVSNLFPPMWILL Trigger: GAGAAGGATCCACATTGGAGGGAACAGGTTAGACACCTGAATTCATTTCCTTAAGAGCTGATCCACTGGGATTCTCAGTTTCTGGATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR GCA 90 bp | GTATTTATTTGTGTGATTTCTGTTTGTATGTGTGCAGTGGACTTGTaGCCAGGTGCATGTGGAGATCCTAGGTTATCTGAGGAACCATGT | + |
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Preference number: 1 (lower is better) Translates to: VFICVISVCMCAVDL*PGACGDPRLSEEPC Trigger: ACATGGTTCCTCAGATAACCTAGGATCTCCACATGCACCTGGGCACAAGTCCACTGCACACATACAAACAGAAATCACACAAATAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR CCA 90 bp | GATATAGCTAGATATAGTTTGGCTAGCCATCTTGCTTTGGATATCTaGTCTCTATCTCCAGAGGCTGGAATTACAAGTGAGCCACTACAT | + |
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Preference number: 1 (lower is better) Translates to: DIARYSLASHLALDI*SLSPEAGITSEPLH Trigger: ATGTAGTGGCTCACTTGTAATTCCAGCCTCTGGAGATAGAGACCAGATATCCAAAGCAAGATGGCTAGCCAAACTATATCTAGCTATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR TCA 90 bp | AATGAGATCCCTAAGCTGCTAGTTGTCCTTTATGTTAGCTATCCTTaGAACTGCGTGATTAAACATGAATTTGGTCAGAGAAGGGATTCT | + |
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Preference number: 1 (lower is better) Translates to: NEIPKLLVVLYVSYP*NCVIKHEFGQRRDS Trigger: AGAATCCCTTCTCTGACCAAATTCATGTTTAATCACGCAGTTTCAAGGATAGCTAACATAAAGGACAACTAGCAGCTTAGGGATCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR TCA 90 bp | ATTCATGAAACTCAGTCTCCTTTCAACATGAAGTTTTTGCTCAAGTaGCAAAAATCTCCCATTTCCTATAATTTCCTAGGTCTTACCCAG | + |
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Preference number: 1 (lower is better) Translates to: IHETQSPFNMKFLLK*QKSPISYNFLGLTQ Trigger: CTGGGTAAGACCTAGGAAATTATAGGAAATGGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGACTGAGTTTCATGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCCGATATAGCTGGCCATCCAGAAACTaGGAATCCCAGTGGATCAGC | + |
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Preference number: 2 (lower is better) Translates to: LYALGQGLSIQPRARRYSWPSRN*ESQWIS Trigger: GCTGATCCACTGGGATTCTCAGTTTCTGGATGGCCA...GCTATATCGGCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTCCACTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCCTGGGGATCCAAAGTTaGGTCCTCATGCTTACACAG | + |
|
Preference number: 2 (lower is better) Translates to: TLPLYALGQGLSIQPRARLGIQS*VLMLTQ Trigger: CTGTGTAAGCATGAGGACCCAACTTTGGATCCCCAG...GCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAGTGGAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTCCACTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCAAAGTTGGGTCCTCATaGTTACACAGCAAGCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: TLPLYALGQGLSIQPRARKVGSS*LHSKHF Trigger: AAAGTGCTTGCTGTGTAAGCATGAGGACCCAACTTT...GCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAGTGGAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATCCTGCTAGCAGCCACCTTTCTTGGCTTGTGCAGTATCATTAGAGCAGCATGGCCATCCAGAAACTaGGAATCCCAGTGGATCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SILLAATFLGLCSIIRAAWPSRN*ESQWIS Trigger: GCTGATCCACTGGGATTCTCAGTTTCTGGATGGCCA...TGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGGGCCTCACTCAGCTCTTAAGGAAATaGATTCAGGTGTCTAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LSQCCCAVQQVGSTLGLTQLLRK*IQVSNL Trigger: CAGGTTAGACACCTGAATTCATTTCCTTAAGAGCTG...AGTGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCCGATATAGCATCCTTGAAACTGCGTaGTTAAACATGAATTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LYALGQGLSIQPRARRYSILETA*LNMNLV Trigger: GACCAAATTCATGTTTAATCACGCAGTTTCAAGGAT...GCTATATCGGCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGGGCCTCACTACCTTTCTTGGCTTGTaGAGTATCATTAGAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LSQCCCAVQQVGSTLGLTTFLGL*SIIRAA Trigger: TGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGT...AGTGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGCCAGCCTTAGCTGAAACCTCAAAGACCCAACTAAGGCATACCTGGACTTTTAAGTGGGGATGGTaGGCTTTTAAAGCAACACAG | + |
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Preference number: 2 (lower is better) Translates to: WEPALAETSKTQLRHTWTFKWGW*AFKATQ Trigger: CTGTGTTGCTTTAAAAGCCCACCATCCCCACTTAAA...AGTCCAGGTATGCCTTAGTTGGGTCTTTGAGGTTTCAGCTAAGGCTGGCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATCCTGCTAGCAGCCACCTTTCTTGGCTTGTGCAGTATCATTAGAGCAGCAACTGGAAGAGAGTGGTaGGATGTAGATGATAACAGA | + |
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Preference number: 2 (lower is better) Translates to: SILLAATFLGLCSIIRAATGREW*DVDDNR Trigger: TCTGTTATCATCTACATCTCACCACTCTCTTCCAGT...TGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTAATGCTTAGGGTCCTGTCCAGTGTCACACTGGAAGAGAGTGGTGAGATGTTTAAGTGGGGATGGTaGGCTTTTAAAGCAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: ALMLRVLSSVTLEESGEMFKWGW*AFKATQ Trigger: CTGTGTTGCTTTAAAAGCCCACCATCCCCACTTAAA...CATCTCACCACTCTCTTCCAGTGTGACACTGGACAGGACCCTAAGCATTAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCTTTCAACATGAAGTTTTTGCTCAAGTGACAAAAATCTCCCATTTCCTAGTGCAGTACAGCAGGTaGGCTCTACCCTGGGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VSFQHEVFAQVTKISHFLVQYSR*ALPWAS Trigger: TGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCAC...TAGGAAATGGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTAATGCTTAGGGTCCTGTCCAGTGTCACACTGGAAGAGAGTGGTGAGATGACATTTAAGTGGGGATaGTGGGCTTTTAAAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: ALMLRVLSSVTLEESGEMTFKWG*WAFKAT Trigger: TGTTGCTTTAAAAGCCCACCATCCCCACTTAAATGT...CATCTCACCACTCTCTTCCAGTGTGACACTGGACAGGACCCTAAGCATTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGCAAAACAAGGCATTAATGCTTAGGGTCCTGTCCAGTGTCACACTGGAAACATTTAAGTGGGGATaGTGGGCTTTTAAAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: SEQNKALMLRVLSSVTLETFKWG*WAFKAT Trigger: TGTTGCTTTAAAAGCCCACCATCCCCACTTAAATGT...TTCCAGTGTGACACTGGACAGGACCCTAAGCATTAATGCCTTGTTTTGCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGCTAAACGTTTCCCTACATTCATCAAAATTCTTTCATGGGAATTTGCTGAATGTAACATTTAAGTaGGGATGGTGGGCTTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: MRLNVSLHSSKFFHGNLLNVTFK*GWWAFK Trigger: TTTAAAAGCCCACCATCCCCACTTAAATGTTACATT...CAGCAAATTCCCATGAAAGAATTTTGATGAATGTAGGGAAACGTTTAGCCTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR GCA 72 bp | GCCTCCATCCTGCTAGCAGCCACCTTTCTTGGCTTGTaGAGTATCATTAGAGCAGCAGCCACACTGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: ASILLAATFLGL*SIIRAAATLDS Trigger: GCTGTCCAGTGTGGCTGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCTTCCACTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCGCTATTGTCACCATTTaGACAGTGAGCAAAACAAGG | + |
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Preference number: 3 (lower is better) Translates to: TLPLYALGQGLSIQPRARAIVTI*TVSKTR Trigger: CCTTGTTTTGCTCACTGTCAAAATGGTGACAATAGC...GCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAGTGGAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR GCA 72 bp | GTTGGTCAAGTGTTAACTACTTTATCCTTAAGTCAGTaGTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTG | + |
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Preference number: 3 (lower is better) Translates to: VGQVLTTLSLSQ*CCAVQQVGSTL Trigger: CAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTAGTTAACACTTGACCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR GCA 72 bp | TGTGTGATTTCTGTTTGTATGTGTGCAGTGGACTTGTaGCCAGGTGCATGTGGAGATCCTAGGTTATCTGAG | + |
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Preference number: 3 (lower is better) Translates to: CVISVCMCAVDL*PGACGDPRLSE Trigger: CTCAGATAACCTAGGATCTCCACATGCACCTGGGCACAAGTCCACTGCACACATACAAACAGAAATCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR TCA 72 bp | AAACTGAGAATCCCAGTGGATCAGCTCTTAAGGAAATaGATTCAGGTGTCTAACCTGTTCCCTCCAATGTGG | + |
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Preference number: 3 (lower is better) Translates to: KLRIPVDQLLRK*IQVSNLFPPMW Trigger: CCACATTGGAGGGAACAGGTTAGACACCTGAATTCATTTCCTTAAGAGCTGATCCACTGGGATTCTCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR CCA 72 bp | TGTGACATTCAATTTCACGAGACTTCTGGAGTAAGCTaGTCTGATAACTCCATTTTACCAGTAGAATGTGGT | + |
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Preference number: 3 (lower is better) Translates to: CDIQFHETSGVS*SDNSILPVECG Trigger: ACCACATTCTACTGGTAAAATGGAGTTATCAGACCAGCTTACTCCAGAAGTCTCGTGAAATTGAATGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCTTTCAACATGAAGTTTTTGCTCAAGTGACAAAAATCTCCCATTTCCTAGCTATTGTCACCATTTaGACAGTGAGCAAAACAAGG | + |
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Preference number: 3 (lower is better) Translates to: VSFQHEVFAQVTKISHFLAIVTI*TVSKTR Trigger: CCTTGTTTTGCTCACTGTCAAAATGGTGACAATAGC...TAGGAAATGGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR TCA 72 bp | CCTAAGCTGCTAGTTGTCCTTTATGTTAGCTATCCTTaGAACTGCGTGATTAAACATGAATTTGGTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: PKLLVVLYVSYP*NCVIKHEFGQR Trigger: TCTCTGACCAAATTCATGTTTAATCACGCAGTTTCAAGGATAGCTAACATAAAGGACAACTAGCAGCTTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| 3UTR CCA 72 bp | CGTTATTGTATGATACATGCTACCATGACTGCTAGTTaGTCAAGTGTTAACTACTTTATCCTTAAGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: RYCMIHATMTAS*SSVNYFILKSV Trigger: CACTGACTTAAGGATAAAGTAGTTAACACTTGACCAACTAGCAGTCATGGTAGCATGTATCATACAATAACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR TCA 72 bp | ACTCAGTCTCCTTTCAACATGAAGTTTTTGCTCAAGTaGCAAAAATCTCCCATTTCCTATAATTTCCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: TQSPFNMKFLLK*QKSPISYNFLG Trigger: ACCTAGGAAATTATAGGAAATGGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGACTGAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | ACTCTTCCACTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCGCTGCTGCCTCAATCTaGAGGTCTTCCCACATTCCT | + |
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Preference number: 4 (lower is better) Translates to: TLPLYALGQGLSIQPRARAAASI*RSSHIP Trigger: AGGAATGTGGGAAGACCTTCAGATTGAGGCAGCAGC...GCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAGTGGAAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | CTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCCGATATAGCTGGGTATGGATTCTCTaGTGGCGAACAAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LYALGQGLSIQPRARRYSWVWIL*WRTSCC Trigger: GCAGCAGCTTGTTCGCCATCAGAGAATCCATACCCA...GCTATATCGGCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCCAGCCAATGGCCATCCAGAAACTGAGAATCCCAGTGGATCAGCTCTTAGGTGCGCCCGCTGTCTaGAGGGTTGCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: IFQPMAIQKLRIPVDQLLGAPAV*RVAHTP Trigger: AGGAGTGTGGGCAACCCTTCAGACAGCGGGCGCACC...TAAGAGCTGATCCACTGGGATTCTCAGTTTCTGGATGGCCATTGGCTGGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR CAA 72 bp | CTGGCCTCCATCCTGCTAGCAGCCACCTTTCTTGGCTaGTGCAGTATCATTAGAGCAGCAGCCACACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LASILLAATFLG*CSIIRAAATLD Trigger: GTCCAGTGTGGCTGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGGGCCTCACTGTGCTGACTAAGCGTTaGGCGGCGGATAAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSQCCCAVQQVGSTLGLTVLTKR*AADKGL Trigger: AAGACCTTTATCCGCCGCTCAACGCTTAGTCAGCAC...AGTGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGCAAAACAAGGCATTAATGCTTAGGGTCCTGTCCAGTGTCACACTGGAATGCCGAGCCAGCTGCTaGTGGACCCGGAAGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: SEQNKALMLRVLSSVTLECRASC*WTRKAF Trigger: AAAGGCCTTCCGGGTCCATCAGCAGCTGGCTCGGCA...TTCCAGTGTGACACTGGACAGGACCCTAAGCATTAATGCCTTGTTTTGCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | ACTCTTCCACTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCCTAAGACCAGAACCCTaGGGGCTTAGGTTTTTAATT | + |
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Preference number: 4 (lower is better) Translates to: TLPLYALGQGLSIQPRARLRPEP*GLRFLI Trigger: AATTAAAAACCTAAGCCCTCAGGGTTCTGGTCTTAG...GCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAGTGGAAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGGGCCTCACTCCAAAGTGGATTTTCTaGTGTACTCGAAGGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LSQCCCAVQQVGSTLGLTPKWIF*CTRRSG Trigger: CCCAGACCTTCGAGTACATCAGAAAATCCACTTTGG...AGTGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGGGCCTCACTGCTGTTGGCATATTCTaGAGGACTTACCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LSQCCCAVQQVGSTLGLTAVGIF*RTYHSP Trigger: AGGACTGTGGTAAGTCCTTCAGAATATGCCAACAGC...AGTGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | GCATTAATGCTTAGGGTCCTGTCCAGTGTCACACTGGAAGAGAGTGGTGAGATGTGGGTATGGATTCTCTaGTGGCGAACAAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ALMLRVLSSVTLEESGEMWVWIL*WRTSCC Trigger: GCAGCAGCTTGTTCGCCATCAGAGAATCCATACCCA...CATCTCACCACTCTCTTCCAGTGTGACACTGGACAGGACCCTAAGCATTAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR GCA 90 bp | TACTTTATCCTTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTCTGTGGATCTTCTGGTaGTGGGTCAGGTGTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: YFILKSVLLCSTAGGLYPLWIFW*WVRCEC Trigger: GCACTCACACCTGACCCAGCACCAGAAGATCCACAG...AGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGGGCCTCACTCTAAGACCAGAACCCTaGGGGCTTAGGTTTTTAATT | + |
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Preference number: 4 (lower is better) Translates to: LSQCCCAVQQVGSTLGLTLRPEP*GLRFLI Trigger: AATTAAAAACCTAAGCCCTCAGGGTTCTGGTCTTAG...AGTGAGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TACTTTATCCTTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGCTGGGAGTAGCTACTaGAGGTCTTCCAGCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: YFILKSVLLCSTAGGLYPAGSSY*RSSSIP Trigger: TGGAATGCTGGAAGACCTTCAGTAGCTACTCCCAGC...AGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | ATGAGGCTAAACGTTTCCCTACATTCATCAAAATTCTTTCATGGGAATTTGCTGGGTGCGCCCGCTGTCTaGAGGGTTGCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: MRLNVSLHSSKFFHGNLLGAPAV*RVAHTP Trigger: AGGAGTGTGGGCAACCCTTCAGACAGCGGGCGCACC...CAGCAAATTCCCATGAAAGAATTTTGATGAATGTAGGGAAACGTTTAGCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TCCATCCTGCTAGCAGCCACCTTTCTTGGCTTGTGCAGTATCATTAGAGCAGCAAGTTTCTCAGAAGTGTaGAGTCTCTGGTGTCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SILLAATFLGLCSIIRAASFSEV*SLWCRV Trigger: TACCCGACACCAGAGACTTCACACTTCTGAGAAACT...TGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TCCATCCTGCTAGCAGCCACCTTTCTTGGCTTGTGCAGTATCATTAGAGCAGCACCAAAGTGGATTTTCTaGTGTACTCGAAGGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SILLAATFLGLCSIIRAAPKWIF*CTRRSG Trigger: CCCAGACCTTCGAGTACATCAGAAAATCCACTTTGG...TGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR GCA 90 bp | TACTTTATCCTTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTTGGGTCAGGTGTGAGTaGTGTCTGAAGGCCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: YFILKSVLLCSTAGGLYPWVRCE*CLKAFL Trigger: TAAGAAGGCCTTCAGACAGCACTCACACCTGACCCA...AGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR CAA 72 bp | TCAAGTGTTAACTACTTTATCCTTAAGTCAGTGCTGTaGTGCAGTACAGCAGGTGGGCTCTACCCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSVNYFILKSVL*CSTAGGLYPGP Trigger: AGGCCCAGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTAGTTAACACTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TACTTTATCCTTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTAGTTTCTCAGAAGTGTaGAGTCTCTGGTGTCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: YFILKSVLLCSTAGGLYPSFSEV*SLWCRV Trigger: TACCCGACACCAGAGACTTCACACTTCTGAGAAACT...AGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGCAAAACAAGGCATTAATGCTTAGGGTCCTGTCCAGTGTCACACTGGAAATGTACTCGAAGGTCTaGGCCACACACGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SEQNKALMLRVLSSVTLEMYSKV*ATHEGF Trigger: AAAGCCTTCGTGTGTGGCCCAGACCTTCGAGTACAT...TTCCAGTGTGACACTGGACAGGACCCTAAGCATTAATGCCTTGTTTTGCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR CCA 90 bp | TCCATCCTGCTAGCAGCCACCTTTCTTGGCTTGTGCAGTATCATTAGAGCAGCATGGACGGTCAGCTGTTaGCATATTCTGAAGGACTTA | + |
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Preference number: 4 (lower is better) Translates to: SILLAATFLGLCSIIRAAWTVSC*HILKDL Trigger: TAAGTCCTTCAGAATATGCCAACAGCTGACCGTCCA...TGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCCAGCCAATGGCCATCCAGAAACTGAGAATCCCAGTGGATCAGCTCTTAATGAATGCTCTGATGTaGAATCAGCTGGGAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: IFQPMAIQKLRIPVDQLLMNALM*NQLGVA Trigger: AGCTACTCCCAGCTGATTTCACATCAGAGCATTCAT...TAAGAGCTGATCCACTGGGATTCTCAGTTTCTGGATGGCCATTGGCTGGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR GCA 90 bp | CTCGCCGATATAGCTAGATATAGTTTGGCTAGCCATCTTGCTTTGGATATCTGGTGGGTCAGGTGTGAGTaGTGTCTGAAGGCCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LADIARYSLASHLALDIWWVRCE*CLKAFL Trigger: TAAGAAGGCCTTCAGACAGCACTCACACCTGACCCA...CCAGATATCCAAAGCAAGATGGCTAGCCAAACTATATCTAGCTATATCGGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| CDS-3UTR CCA 90 bp | ATCTTCCAGCCAATGGCCATCCAGAAACTGAGAATCCCAGTGGATCAGCTCTTATGGACGGTCAGCTGTTaGCATATTCTGAAGGACTTA | + |
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Preference number: 4 (lower is better) Translates to: IFQPMAIQKLRIPVDQLLWTVSC*HILKDL Trigger: TAAGTCCTTCAGAATATGCCAACAGCTGACCGTCCA...TAAGAGCTGATCCACTGGGATTCTCAGTTTCTGGATGGCCATTGGCTGGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | TGGGAGCCAGCCTTAGCTGAAACCTCAAAGACCCAACTAAGGCATACCTGGACTTTGTGTTTACATTCCTaGTCATCACTAAGACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WEPALAETSKTQLRHTWTLCLHS*SSLRPE Trigger: TTCTGGTCTTAGTGATGATCAGGAATGTAAACACAA...AGTCCAGGTATGCCTTAGTTGGGTCTTTGAGGTTTCAGCTAAGGCTGGCTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | CTCGCCGATATAGCTAGATATAGTTTGGCTAGCCATCTTGCTTTGGATATCTGGGCTGTTGGCATATTCTaGAGGACTTACCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LADIARYSLASHLALDIWAVGIF*RTYHSP Trigger: AGGACTGTGGTAAGTCCTTCAGAATATGCCAACAGC...CCAGATATCCAAAGCAAGATGGCTAGCCAAACTATATCTAGCTATATCGGCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| CDS-3UTR GCA 90 bp | TGGGAGCCAGCCTTAGCTGAAACCTCAAAGACCCAACTAAGGCATACCTGGACTAATATACTTCACAAATaGCCTTGTCTGAAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: WEPALAETSKTQLRHTWTNILHK*PCLKMK Trigger: CTTCATCTTCAGACAAGGGCATTTGTGAAGTATATT...AGTCCAGGTATGCCTTAGTTGGGTCTTTGAGGTTTCAGCTAAGGCTGGCTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | ATGAGGCTAAACGTTTCCCTACATTCATCAAAATTCTTTCATGGGAATTTGCTGGCTGCTGCCTCAATCTaGAGGTCTTCCCACATTCCT | + |
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Preference number: 4 (lower is better) Translates to: MRLNVSLHSSKFFHGNLLAAASI*RSSHIP Trigger: AGGAATGTGGGAAGACCTTCAGATTGAGGCAGCAGC...CAGCAAATTCCCATGAAAGAATTTTGATGAATGTAGGGAAACGTTTAGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | AATAATATGTGTAGGTGCTATTGTCACCATTTTGACAGTGAGCAAAACAAGGCAGCTGGGAGTAGCTACTaGAGGTCTTCCAGCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: NNMCRCYCHHFDSEQNKAAGSSY*RSSSIP Trigger: TGGAATGCTGGAAGACCTTCAGTAGCTACTCCCAGC...TGCCTTGTTTTGCTCACTGTCAAAATGGTGACAATAGCACCTACACATATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR CCA 90 bp | GTCTCCTTTCAACATGAAGTTTTTGCTCAAGTGACAAAAATCTCCCATTTCCTATGGATCTTCTGGTGCTaGGTCAGGTGTGAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VSFQHEVFAQVTKISHFLWIFWC*VRCECC Trigger: ACAGCACTCACACCTGACCCAGCACCAGAAGATCCA...TAGGAAATGGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR CCA 90 bp | ATGAGGCTAAACGTTTCCCTACATTCATCAAAATTCTTTCATGGGAATTTGCTGATGTACTCGAAGGTCTaGGCCACACACGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: MRLNVSLHSSKFFHGNLLMYSKV*ATHEGF Trigger: AAAGCCTTCGTGTGTGGCCCAGACCTTCGAGTACAT...CAGCAAATTCCCATGAAAGAATTTTGATGAATGTAGGGAAACGTTTAGCCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| 3UTR CAA 72 bp | GATATAGCTAGATATAGTTTGGCTAGCCATCTTGCTTaGGATATCTGGTCTCTATCTCCAGAGGCTGGAATT | + |
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Preference number: 4 (lower is better) Translates to: DIARYSLASHLA*DIWSLSPEAGI Trigger: AATTCCAGCCTCTGGAGATAGAGACCAGATATCCAAAGCAAGATGGCTAGCCAAACTATATCTAGCTATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | AATAATATGTGTAGGTGCTATTGTCACCATTTTGACAGTGAGCAAAACAAGGCAATGAATGCTCTGATGTaGAATCAGCTGGGAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: NNMCRCYCHHFDSEQNKAMNALM*NQLGVA Trigger: AGCTACTCCCAGCTGATTTCACATCAGAGCATTCAT...TGCCTTGTTTTGCTCACTGTCAAAATGGTGACAATAGCACCTACACATATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR TCA 90 bp | GTCTCCTTTCAACATGAAGTTTTTGCTCAAGTGACAAAAATCTCCCATTTCCTATTGTGTTTACATTCCTaGTCATCACTAAGACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VSFQHEVFAQVTKISHFLLCLHS*SSLRPE Trigger: TTCTGGTCTTAGTGATGATCAGGAATGTAAACACAA...TAGGAAATGGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR GCA 90 bp | GTCTCCTTTCAACATGAAGTTTTTGCTCAAGTGACAAAAATCTCCCATTTCCTAAATATACTTCACAAATaGCCTTGTCTGAAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: VSFQHEVFAQVTKISHFLNILHK*PCLKMK Trigger: CTTCATCTTCAGACAAGGGCATTTGTGAAGTATATT...TAGGAAATGGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR CAA 90 bp | ACTCTTCCACTGTATGCACTGGGGCAGGGGCTCTCAATCCAACCCAGAGCTCGCGATGAAGTATCGGTCTaGAATCTAGACTCCAAATCC | + |
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Preference number: 5 (lower is better) Translates to: TLPLYALGQGLSIQPRARDEVSV*NLDSKS Trigger: GGATTTGGAGTCTAGATTCAAGACCGATACTTCATC...GCGAGCTCTGGGTTGGATTGAGAGCCCCTGCCCCAGTGCATACAGTGGAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207873.2 |
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| CDS-3UTR CAA 90 bp | TCCATCCTGCTAGCAGCCACCTTTCTTGGCTTGTGCAGTATCATTAGAGCAGCAGTGGACGGTCAGCTGTaGGCATATTCTGAAGGACTT | + |
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Preference number: 5 (lower is better) Translates to: SILLAATFLGLCSIIRAAVDGQL*AYSEGL Trigger: AAGTCCTTCAGAATATGCCAACAGCTGACCGTCCAC...TGCTGCTCTAATGATACTGCACAAGCCAAGAAAGGTGGCTGCTAGCAGGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGCAAAACAAGGCATTAATGCTTAGGGTCCTGTCCAGTGTCACACTGGAAGTGGACGGTCAGCTGTaGGCATATTCTGAAGGACTT | + |
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Preference number: 5 (lower is better) Translates to: SEQNKALMLRVLSSVTLEVDGQL*AYSEGL Trigger: AAGTCCTTCAGAATATGCCAACAGCTGACCGTCCAC...TTCCAGTGTGACACTGGACAGGACCCTAAGCATTAATGCCTTGTTTTGCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS-3UTR CAA 90 bp | TACTTTATCCTTAAGTCAGTGCTGTTGTGCAGTACAGCAGGTGGGCTCTACCCTGATGAAGTATCGGTCTaGAATCTAGACTCCAAATCC | + |
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Preference number: 5 (lower is better) Translates to: YFILKSVLLCSTAGGLYPDEVSV*NLDSKS Trigger: GGATTTGGAGTCTAGATTCAAGACCGATACTTCATC...AGGGTAGAGCCCACCTGCTGTACTGCACAACAGCACTGACTTAAGGATAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS CAA 90 bp | TTCTCAATCAACTCCCACTGTAACGAATATACTTCACAAATGCCCTaGTCTGAAGATGAAGTATCGGTCTTGAATCTAGACTCCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: FSINSHCNEYTSQMP*SEDEVSVLNLDSKS Trigger: GGATTTGGAGTCTAGATTCAAGACCGATACTTCATCTTCAGACAAGGGCATTTGTGAAGTATATTCGTTACAGTGGGAGTTGATTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077787.8 ENSMUST00000207072.2 ENSMUST00000207873.2 |
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| CDS CAA 72 bp | AACTCCCACTGTAACGAATATACTTCACAAATGCCCTaGTCTGAAGATGAAGTATCGGTCTTGAATCTAGAC | + |
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Preference number: 6 (lower is better) Translates to: NSHCNEYTSQMP*SEDEVSVLNLD Trigger: GTCTAGATTCAAGACCGATACTTCATCTTCAGACAAGGGCATTTGTGAAGTATATTCGTTACAGTGGGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077787.8 ENSMUST00000207072.2 ENSMUST00000207873.2 |
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