Pregenerated sensors for ZFP13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062012Ensembl transcript IDs: ENSMUST00000057029.5, ENSMUST00000115516.11, ENSMUST00000227952.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCACTCCATCATCCCACTaGCTAAGACCCAGCGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ALLALAPPTLPCPPVPPPTPSSH*LRPSVF Trigger: GAAGACGCTGGGTCTTAGCCAGTGGGATGATGGAGT...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| 3UTR-3UTR CCA 90 bp | GCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTTTGTCCCAGCTTCCCTaGGTGTTCTCACTGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ATSQSSPHSIIPLAKTQRLSQLP*VFSLLS Trigger: AGAGAGCAGTGAGAACACCCAGGGAAGCTGGGACAA...ACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| 3UTR-3UTR CAA 90 bp | GCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCTAGCATCAGCGGGGTaGTCCCAGCTTCCCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: ATSQSSPHSIIPLAKTQRLASAG*SQLPWV Trigger: CACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAG...ACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| 3UTR-3UTR CAA 90 bp | TCTGCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCTAGCATCAGCGGGGTaGTCCCAGCTTCCCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: SAARVPALLALAPPTLPCLASAG*SQLPWV Trigger: CACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAG...GCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCGAGCGCCCCCGCAGCTaGCGCCCCCAGCATGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: ALLALAPPTLPCPPVPPPERPRS*RPQHEH Trigger: ATGCTCATGCTGGGGGCGGCAGCTGCGGGGGCGCTC...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCGGCCTCACGCCACGGTaGGTGCGTTGGTGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RLPRALASAGLSQLPWVFGLTPR*VRWWAV Trigger: CACTGCCCACCAACGCACTCACCGTGGCGTGAGGCC...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGGAAGCAGGTGGTGGTaGCGTGAGCGCCCCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSGSRWW*RERPRS Trigger: GCTGCGGGGGCGCTCACGGCACCACCACCTGCTTCC...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTGGAAGCAGGTGGTGGTaGCGTGAGCGCCCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATSQSSPHSIIPLAKTQRGSRWW*RERPRS Trigger: GCTGCGGGGGCGCTCACGGCACCACCACCTGCTTCC...ACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCGAGTGCCCTGGTGTGTaGCTAGGTCCGAGCGACGGG | + |
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Preference number: 4 (lower is better) Translates to: RLPRALASAGLSQLPWVFECPGV*LGPSDG Trigger: CCCGTCGCTCGGACCTAGTCACACACCAGGGCACTC...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGGCCTCACGCCACGGTaGGTGCGTTGGTGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSGLTPR*VRWWAV Trigger: CACTGCCCACCAACGCACTCACCGTGGCGTGAGGCC...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | TCCATCATCCCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGAGCGCCCCCGCAGCTaGCGCCCCCAGCATGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SIIPLAKTQRLPRALASAERPRS*RPQHEH Trigger: ATGCTCATGCTGGGGGCGGCAGCTGCGGGGGCGCTC...CGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGGGATGATGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGAGTGCCCTGGTGTGTaGCTAGGTCCGAGCGACGGG | + |
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Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSECPGV*LGPSDG Trigger: CCCGTCGCTCGGACCTAGTCACACACCAGGGCACTC...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCATCTTCTCGTGCCGGTaGAGGTTGGAGCGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RLPRALASAGLSQLPWVFIFSCR*RLERRL Trigger: CAGCCGCCGCTCCAACCTGCACCGGCACGAGAAGAT...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCGTGTGGATCTTCTCGTaGCGGTGCAGGTTGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLALAPPTLPCPPVPPPVWIFS*RCRLER Trigger: CCGCTCCAACCTGCACCGGCACGAGAAGATCCACAC...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTAGTCCTGTCCTCCCGTaGTGCCCCCTCACTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ATSQSSPHSIIPLAKTQRSPVLP*CPLTVW Trigger: CCACACAGTGAGGGGGCATCACGGGAGGACAGGACT...ACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCGGTGCGAGTGCCAACTaGAGCCCTTGCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLAKTQRLPRALASAGLSGASAN*SPCHTA Trigger: AGCAGTGTGGCAAGGGCTTCAGTTGGCACTCGCACC...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCAGTGCTGGATGAGGTGTaGGCTGCGGCCGAAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AARVPALLALAPPTLPCPVLDEV*AAAEAL Trigger: AAGCGCTTCGGCCGCAGCTCACACCTCATCCAGCAC...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTGCTGGATGAGGTGTaGGCTGCGGCCGAAGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSVLDEV*AAAEAL Trigger: AAGCGCTTCGGCCGCAGCTCACACCTCATCCAGCAC...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCGCGTGGAGTGGTGGCTaGAGCTCTTCCAACACGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLAKTQRLPRALASAGLSAWSGG*SSSNTR Trigger: CCTCGTGTTGGAAGAGCTTCAGCCACCACTCCACGC...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTGGGCGGAGCTCTGGGTaGAGCACTTGCTGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ATSQSSPHSIIPLAKTQRGRSSG*STCCRW Trigger: CCATCTGCAGCAAGTGCTTCACCCAGAGCTCCGCCC...ACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCTGCGGCCGAAGCGCTTaGCACAGTCCGTGCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: PLAKTQRLPRALASAGLSCGRSA*HSPCRY Trigger: ATACCTGCACGGACTGTGGCAAGCGCTTCGGCCGCA...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | CCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCGTGCTGACCACACTTTaGGTCTTCCCCCGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PPPSPHPTPSSHWLRPSVVLTTL*VFPRGP Trigger: TGGGCCCCGGGGGAAGACCCAAAGTGTGGTCAGCAC...GACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCGCATGGCCAGAGCCTTaGGTCCAGTGGTGTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: ALLALAPPTLPCPPVPPPAWPEP*VQWCGS Trigger: AGATCCACACCACTGGACCCAAGGCTCTGGCCATGC...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | TCCATCATCCCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGAGTCCTGTCCTCCCGTaGTGCCCCCTCACTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SIIPLAKTQRLPRALASASPVLP*CPLTVW Trigger: CCACACAGTGAGGGGGCATCACGGGAGGACAGGACT...CGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGGGATGATGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCCCACTAGCCACGTGCTaGCCACACTTTGGGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RLPRALASAGLSQLPWVFPLATC*PHFGSS Trigger: GGAAGACCCAAAGTGTGGTCAGCACGTGGCTAGTGG...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | CCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCGGTGCGAGTGCCAACTaGAGCCCTTGCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PPPSPHPTPSSHWLRPSVGASAN*SPCHTA Trigger: AGCAGTGTGGCAAGGGCTTCAGTTGGCACTCGCACC...GACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCAGCGTGGAGTGGTGGCTaGAGCTCTTCCAACACGAGG | + |
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Preference number: 4 (lower is better) Translates to: AARVPALLALAPPTLPCPAWSGG*SSSNTR Trigger: CCTCGTGTTGGAAGAGCTTCAGCCACCACTCCACGC...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | TCCATCATCCCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGCGGAGCTCTGGGTaGAGCACTTGCTGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SIIPLAKTQRLPRALASAGRSSG*STCCRW Trigger: CCATCTGCAGCAAGTGCTTCACCCAGAGCTCCGCCC...CGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGGGATGATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCCCAGGCAGTAAGGAGTaGAGCAGCCATCTTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: ALLALAPPTLPCPPVPPPPGSKE*SSHLSL Trigger: GAGCGAAAGATGGCTGCTGCACTCCTTACTGCCTGG...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | CCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCTGCGGCCGAAGCGCTTaGCACAGTCCGTGCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: PPPSPHPTPSSHWLRPSVCGRSA*HSPCRY Trigger: ATACCTGCACGGACTGTGGCAAGCGCTTCGGCCGCA...GACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | TCCATCATCCCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGATCTTCTCGTGCCGGTaGAGGTTGGAGCGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SIIPLAKTQRLPRALASAIFSCR*RLERRL Trigger: CAGCCGCCGCTCCAACCTGCACCGGCACGAGAAGAT...CGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGGGATGATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCAGTGTGGATCTTCTCGTaGCGGTGCAGGTTGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: AARVPALLALAPPTLPCPVWIFS*RCRLER Trigger: CCGCTCCAACCTGCACCGGCACGAGAAGATCCACAC...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | TCCATCATCCCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGTGCTGACCACACTTTaGGTCTTCCCCCGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SIIPLAKTQRLPRALASAVLTTL*VFPRGP Trigger: TGGGCCCCGGGGGAAGACCCAAAGTGTGGTCAGCAC...CGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGGGATGATGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCTTGGGTCCAGTGGTGTaGATCTTCTCGTGCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RLPRALASAGLSQLPWVFLGPVV*IFSCRC Trigger: GCACCGGCACGAGAAGATCCACACCACTGGACCCAA...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCGAGCCTTGGGTCCAGTaGTGTGGATCTTCTCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RLPRALASAGLSQLPWVFEPWVQ*CGSSRA Trigger: GGCACGAGAAGATCCACACCACTGGACCCAAGGCTC...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCGTGGGTGCGATTATGTaGGATGAGATTGGAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ALLALAPPTLPCPPVPPPVGAIM*DEIGAL Trigger: CAGCGCTCCAATCTCATCGCACATAATCGCACCCAC...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCTGCGACGGCCAAGGCTaGAACCACCTTCCCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSCDGQG*NHLPHF Trigger: GAAATGGGGAAGGTGGTTCCAGCCTTGGCCGTCGCA...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGGTCAGCTTTGTACCTaGGCCACTAGCCACGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSGQLCT*ATSHVL Trigger: CAGCACGTGGCTAGTGGCCCAGGTACAAAGCTGACC...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | CCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCGGTCAGCTTTGTACCTaGGCCACTAGCCACGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PPPSPHPTPSSHWLRPSVGQLCT*ATSHVL Trigger: CAGCACGTGGCTAGTGGCCCAGGTACAAAGCTGACC...GACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCTTGGGTCCAGTGGTGTaGATCTTCTCGTGCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSLGPVV*IFSCRC Trigger: GCACCGGCACGAGAAGATCCACACCACTGGACCCAA...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCAGGCAGTAAGGAGTaGAGCAGCCATCTTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: AARVPALLALAPPTLPCPPGSKE*SSHLSL Trigger: GAGCGAAAGATGGCTGCTGCACTCCTTACTGCCTGG...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | TCCATCATCCCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGAGCCTTGGGTCCAGTaGTGTGGATCTTCTCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SIIPLAKTQRLPRALASAEPWVQ*CGSSRA Trigger: GGCACGAGAAGATCCACACCACTGGACCCAAGGCTC...CGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGGGATGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | TCTGCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCGCATGGCCAGAGCCTTaGGTCCAGTGGTGTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: SAARVPALLALAPPTLPCAWPEP*VQWCGS Trigger: AGATCCACACCACTGGACCCAAGGCTCTGGCCATGC...GCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | CCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCCTTCTGGCTCTGCCTTaGTGTGTGTTGACTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPHPTPSSHWLRPSVLLALP*CVLTPE Trigger: CTCAGGAGTCAACACACATCAAGGCAGAGCCAGAAG...GACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCCTTCTGGCTCTGCCTTaGTGTGTGTTGACTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSLLALP*CVLTPE Trigger: CTCAGGAGTCAACACACATCAAGGCAGAGCCAGAAG...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCATGTCCTCTGGGGTCTTaGGAGGACGTGATTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AARVPALLALAPPTLPCPCPLGS*EDVIQM Trigger: CATCTGAATCACGTCCTCTCAAGACCCCAGAGGACA...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCTTACCTGGGACCTCATaGGATTTCTCCTCGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLALAPPTLPCPPVPPPLPGTS*DFSSFS Trigger: TGAGAACGAGGAGAAATCCCATGAGGTCCCAGGTAA...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCACTGTGTGGCTCTTCTaGCTCTGCCTTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLAKTQRLPRALASAGLSTVWLF*LCLDVC Trigger: ACACACATCAAGGCAGAGCCAGAAGAGCCACACAGT...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCTTTCCCAGTGTCTCTaGTCAGCTTTGTACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATSQSSPHSIIPLAKTQRLSQCL*SALYLG Trigger: GCCCAGGTACAAAGCTGACCAGAGACACTGGGAAAG...ACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCCTTTCCCAGTGTCTCTaGTCAGCTTTGTACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSLSQCL*SALYLG Trigger: GCCCAGGTACAAAGCTGACCAGAGACACTGGGAAAG...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTTGGATCAGCGTGGAGTaGTGGCTGAAGCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATSQSSPHSIIPLAKTQRWISVE*WLKLFQ Trigger: TTGGAAGAGCTTCAGCCACCACTCCACGCTGATCCA...ACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR TCA 90 bp | TCTGCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCTGTCCTCTGGGGTCTTaGGAGGACGTGATTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SAARVPALLALAPPTLPCCPLGS*EDVIQM Trigger: CATCTGAATCACGTCCTCTCAAGACCCCAGAGGACA...GCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCTTACCTGGGACCTCATaGGATTTCTCCTCGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAKTQRLPRALASAGLSLPGTS*DFSSFS Trigger: TGAGAACGAGGAGAAATCCCATGAGGTCCCAGGTAA...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCAACTGTGTGGCTCTTCTaGCTCTGCCTTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AARVPALLALAPPTLPCPTVWLF*LCLDVC Trigger: ACACACATCAAGGCAGAGCCAGAAGAGCCACACAGT...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CCA 90 bp | TCTGCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCTGGATCAGCGTGGAGTaGTGGCTGAAGCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAARVPALLALAPPTLPCWISVE*WLKLFQ Trigger: TTGGAAGAGCTTCAGCCACCACTCCACGCTGATCCA...GCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCCGACGGGTGAAGCGCTaGGCACAGCGGTCGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: RLPRALASAGLSQLPWVFRRVKR*AQRSHT Trigger: CGTGTGCGACCGCTGTGCCAAGCGCTTCACCCGTCG...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCTGCAGATGGGGCACTaGTGGGGCTTGGCGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLAKTQRLPRALASAGLSLQMGH*WGLAPV Trigger: CACCGGCGCCAAGCCCCACAAGTGCCCCATCTGCAG...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCCTGCGGCCGAAGCGCTaGCCACAGTCCGTGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLPRALASAGLSQLPWVFLRPKR*PQSVQV Trigger: TACCTGCACGGACTGTGGCAAGCGCTTCGGCCGCAG...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCCGACGGGTGAAGCGCTaGGCACAGCGGTCGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSRRVKR*AQRSHT Trigger: CGTGTGCGACCGCTGTGCCAAGCGCTTCACCCGTCG...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACTGCAGATGGGGCACTaGTGGGGCTTGGCGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AARVPALLALAPPTLPCPLQMGH*WGLAPV Trigger: CACCGGCGCCAAGCCCCACAAGTGCCCCATCTGCAG...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | GCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCACCTGTGCCACCTCCCTTGTGTCCTCTAGGGTaGCGACGGCCAAGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALLALAPPTLPCPPVPPPLCPLG*RRPRLE Trigger: TTCCAGCCTTGGCCGTCGCAACCCTAGAGGACACAA...GGGAGGTGGCACAGGTGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | CGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCCAGCTTCCCTGGGTGTTCGGCAGGAACGGACCTTaGTCCTTAGGGCCAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RLPRALASAGLSQLPWVFGRNGP*SLGPGH Trigger: GTGTCCTGGCCCTAAGGACAAAGGTCCGTTCCTGCC...GAACACCCAGGGAAGCTGGGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | GCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCCCATTGTGTCCTCTAGGGTaGCGACGGCCAAGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AARVPALLALAPPTLPCPLCPLG*RRPRLE Trigger: TTCCAGCCTTGGCCGTCGCAACCCTAGAGGACACAA...TGGGCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | TCTGCAGCTAGAGTGCCTGCCCTTCTAGCCCTGGCTCCTCCCACGTTACCATGCAGCATGGCCAGAGCCTaGGGTCCAGTGGTGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SAARVPALLALAPPTLPCSMARA*GPVVWI Trigger: GATCCACACCACTGGACCCAAGGCTCTGGCCATGCT...GCATGGTAACGTGGGAGGAGCCAGGGCTAGAAGGGCAGGCACTCTAGCTGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | TCCATCATCCCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGAGCATGGCCAGAGCCTaGGGTCCAGTGGTGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SIIPLAKTQRLPRALASASMARA*GPVVWI Trigger: GATCCACACCACTGGACCCAAGGCTCTGGCCATGCT...CGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGGGATGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCTTATGTGCGATGAGATaGGAGCGCTGGCTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLAKTQRLPRALASAGLSLCAMR*ERWLKH Trigger: GTGCTTCAGCCAGCGCTCCAATCTCATCGCACATAA...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | GTGCCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCTTATGTGCGATGAGATaGGAGCGCTGGCTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPPPSPHPTPSSHWLRPSLCAMR*ERWLKH Trigger: GTGCTTCAGCCAGCGCTCCAATCTCATCGCACATAA...GCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | CCACTGGCTAAGACCCAGCGTCTTCCCAGGGCCCTAGCATCAGCGGGGTTGTCCATCTCTGTAGAAATTTaGCTGTGTGTGGTCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLAKTQRLPRALASAGLSISVEI*LCVVQP Trigger: AGGCTGGACCACACACAGCAAAATTTCTACAGAGAT...GGACAACCCCGCTGATGCTAGGGCCCTGGGAAGACGCTGGGTCTTAGCCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS TCA 90 bp | TCACTGTGTGGCTCTTCTGGCTCTGCCTTGATGTGTGTTGACTCCTaGGAGGTTCCCAAGGGCACTGTCTCCTCCTGTCCAGAGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SLCGSSGSALMCVDS*EVPKGTVSSCPESM Trigger: CATGCTCTCTGGACAGGAGGAGACAGTGCCCTTGGGAACCTCTCAGGAGTCAACACACATCAAGGCAGAGCCAGAAGAGCCACACAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS TCA 90 bp | TCTGGGGTCTTGAGAGGACGTGATTCAGATGGGGCTGGCTTTAGCTaGCCAGCTTTCCCAGTGTCTCTGGTCAGCTTTGTACCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGVLRGRDSDGAGFS*PAFPVSLVSFVPGP Trigger: TGGCCCAGGTACAAAGCTGACCAGAGACACTGGGAAAGCTGGTCAGCTAAAGCCAGCCCCATCTGAATCACGTCCTCTCAAGACCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS-3UTR CAA 90 bp | CCACCTCCCAGTCCTCACCCCACTCCATCATCCCACTGGCTAAGACCCAGCGTCATCTCTGTAGAAATTTaGCTGTGTGTGGTCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPPSPHPTPSSHWLRPSVISVEI*LCVVQP Trigger: AGGCTGGACCACACACAGCAAAATTTCTACAGAGAT...GACGCTGGGTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS TCA 90 bp | TCACTGTGTGGCTCTTCTGGCTCTGCCTTGATGTGTGTTGACTCCTaGGAGGTTCCCAAGGGCACTGTCTCCTCCTCATGGGATTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLCGSSGSALMCVDS*EVPKGTVSSSWDFS Trigger: GGAGAAATCCCATGAGGAGGAGACAGTGCCCTTGGGAACCTCTCAGGAGTCAACACACATCAAGGCAGAGCCAGAAGAGCCACACAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227952.2 |
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| CDS CCA 90 bp | CTCCTCCTGTCCAGAGAGCATGTCTCCACAGTGTTGCACATTACCTaGGACCTCATGGGATTTCTCCTCGTTCTCAGTAGCCGCGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLSREHVSTVLHIT*DLMGFLLVLSSRDA Trigger: AGCATCGCGGCTACTGAGAACGAGGAGAAATCCCATGAGGTCCCAGGTAATGTGCAACACTGTGGAGACATGCTCTCTGGACAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS GCA 90 bp | AAGGGCACTGTCTCCTCCTGTCCAGAGAGCATGTCTCCACAGTGTTaGACATTACCTGGGACCTCATGGGATTTCTCCTCGTTCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KGTVSSCPESMSPQC*TLPGTSWDFSSFSV Trigger: TACTGAGAACGAGGAGAAATCCCATGAGGTCCCAGGTAATGTGCAACACTGTGGAGACATGCTCTCTGGACAGGAGGAGACAGTGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS CCA 72 bp | TGTACCTGGGCCACTAGCCACGTGCTGACCACACTTTaGGTCTTCCCCCGGGGCCCACCTGGCCCTAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CTWATSHVLTTL*VFPRGPPGPSP Trigger: AGGACTAGGGCCAGGTGGGCCCCGGGGGAAGACCCAAAGTGTGGTCAGCACGTGGCTAGTGGCCCAGGTACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS TCA 72 bp | CTGGTCAGCTTTGTACCTGGGCCACTAGCCACGTGCTaGCCACACTTTGGGTCTTCCCCCGGGGCCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVSFVPGPLATC*PHFGSSPGAHL Trigger: CAGGTGGGCCCCGGGGGAAGACCCAAAGTGTGGTCAGCACGTGGCTAGTGGCCCAGGTACAAAGCTGACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS CCA 72 bp | AGCATGAGCATGGCCAGAGCCTTGGGTCCAGTGGTGTaGATCTTCTCGTGCCGGTGCAGGTTGGAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SMSMARALGPVV*IFSCRCRLERR Trigger: CCGCCGCTCCAACCTGCACCGGCACGAGAAGATCCACACCACTGGACCCAAGGCTCTGGCCATGCTCATGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS CAA 72 bp | GGAGAAGGAACAACTCCACCAGGCAGGAACGGACCTTaGTCCTTAGGGCCAGGACACGGGGACATCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GEGTTPPGRNGP*SLGPGHGDIQR Trigger: GCGCTGGATGTCCCCGTGTCCTGGCCCTAAGGACAAAGGTCCGTTCCTGCCTGGTGGAGTTGTTCCTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115516.11 ENSMUST00000227952.2 |
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| CDS CAA 72 bp | CGGGACAGTACAGGAGTCCAGGGAGAAGGAACAACTTaGTCCTTAGGGCCAGGACACGGGGACATCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RDSTGVQGEGTT*SLGPGHGDIQR Trigger: GCGCTGGATGTCCCCGTGTCCTGGCCCTAAGGACAAAGTTGTTCCTTCTCCCTGGACTCCTGTACTGTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057029.5 |
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| CDS TCA 72 bp | CACTGGGTTTCTCTGGGCCGCTGTCCTCTGGGGTCTTaGGAGGACGTGATTCAGATGGGGCTGGCTTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HWVSLGRCPLGS*EDVIQMGLALA Trigger: AGCTAAAGCCAGCCCCATCTGAATCACGTCCTCTCAAGACCCCAGAGGACAGCGGCCCAGAGAAACCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS TCA 72 bp | GGCTCTTCTGGCTCTGCCTTGATGTGTGTTGACTCCTaGGAGGTTCCCAAGGGCACTGTCTCCTCCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSSGSALMCVDS*EVPKGTVSSCP Trigger: TGGACAGGAGGAGACAGTGCCCTTGGGAACCTCTCAGGAGTCAACACACATCAAGGCAGAGCCAGAAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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| CDS TCA 72 bp | GGCTCTTCTGGCTCTGCCTTGATGTGTGTTGACTCCTaGGAGGTTCCCAAGGGCACTGTCTCCTCCTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSGSALMCVDS*EVPKGTVSSSW Trigger: CCATGAGGAGGAGACAGTGCCCTTGGGAACCTCTCAGGAGTCAACACACATCAAGGCAGAGCCAGAAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227952.2 |
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| CDS CCA 72 bp | ACCAGCTTTCCCAGTGTCTCTGGTCAGCTTTGTACCTaGGCCACTAGCCACGTGCTGACCACACTTTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TSFPSVSGQLCT*ATSHVLTTLWV Trigger: GACCCAAAGTGTGGTCAGCACGTGGCTAGTGGCCCAGGTACAAAGCTGACCAGAGACACTGGGAAAGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
||
| CDS TCA 72 bp | ACTGTGTGGCTCTTCTGGCTCTGCCTTGATGTGTGTTaGCTCCTGAGAGGTTCCCAAGGGCACTGTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVWLFWLCLDVC*LLRGSQGHCLL Trigger: GAGGAGACAGTGCCCTTGGGAACCTCTCAGGAGTCAACACACATCAAGGCAGAGCCAGAAGAGCCACACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 ENSMUST00000227952.2 |
||
| CDS GCA 72 bp | GTCTCCTCCTGTCCAGAGAGCATGTCTCCACAGTGTTaGACATTACCTGGGACCTCATGGGATTTCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSSCPESMSPQC*TLPGTSWDFSS Trigger: CGAGGAGAAATCCCATGAGGTCCCAGGTAATGTGCAACACTGTGGAGACATGCTCTCTGGACAGGAGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
||
| CDS CAA 90 bp | CAAGGGCACTGTCTCCTCCTGTCCAGAGAGCATGTCTCCACAGTGTaGCACATTACCTGGGACCTCATGGGATTTCTCCTCGTTCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QGHCLLLSREHVSTV*HITWDLMGFLLVLS Trigger: ACTGAGAACGAGGAGAAATCCCATGAGGTCCCAGGTAATGTGCAACACTGTGGAGACATGCTCTCTGGACAGGAGGAGACAGTGCCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
||
| CDS CAA 72 bp | TGTCTCCTCCTGTCCAGAGAGCATGTCTCCACAGTGTaGCACATTACCTGGGACCTCATGGGATTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CLLLSREHVSTV*HITWDLMGFLL Trigger: GAGGAGAAATCCCATGAGGTCCCAGGTAATGTGCAACACTGTGGAGACATGCTCTCTGGACAGGAGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
||
| CDS CCA 72 bp | TCCAGAGAGCATGTCTCCACAGTGTTGCACATTACCTaGGACCTCATGGGATTTCTCCTCGTTCTCAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SREHVSTVLHIT*DLMGFLLVLSS Trigger: GCTACTGAGAACGAGGAGAAATCCCATGAGGTCCCAGGTAATGTGCAACACTGTGGAGACATGCTCTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057029.5 ENSMUST00000115516.11 |
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