Pregenerated sensors for ZFP128 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060397Ensembl transcript IDs: ENSMUST00000144578.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACACTATGCCAGTGCAGAGACTTTATTCCTGGTAAACTCACTGTaGGATAATGGAGAAGATATCTCAAGGTGTCTGCTGTTGCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: PHYASAETLFLVNSL*DNGEDISRCLLLLG Trigger: ACCCAGCAACAGCAGACACCTTGAGATATCTTCTCCATTATCCCACAGTGAGTTTACCAGGAATAAAGTCTCTGCACTGGCATAGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR GCA 90 bp | TCTTCTGCTCTGGTTGAGAGGAGTACAATCAATAACCCCAGTCACTaGTTTCATTCAAATTCTGGCCCAGAAGCACTGCTCAAAAACCCA | + |
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Preference number: 1 (lower is better) Translates to: SSALVERSTINNPSH*FHSNSGPEALLKNP Trigger: TGGGTTTTTGAGCAGTGCTTCTGGGCCAGAATTTGAATGAAAGCAGTGACTGGGGTTATTGATTGTACTCCTCTCAACCAGAGCAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CCA 90 bp | ATACTATTGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTaGACACTTAAGTATGTTGAGCAGTATCCAGGGCCTCCACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: ILLIFGARKFLEELL*TLKYVEQYPGPPPR Trigger: TCTGGGTGGAGGCCCTGGATACTGCTCAACATACTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATTATTGTGCCATCTCTTaGCACCCATACACTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HQPQLCGRHHFLRKSEVNYCAIS*HPYTVW Trigger: CCACACAGTGTATGGGTGGCAAGAGATGGCACAATA...ATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 90 bp | AACTCACTGTGGGATAATGGAGAAGATATCTCAAGGTGTCTGCTGTaGCTGGGTCTAGTGGCACACAGCTATGATCCCAGACTTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: NSLWDNGEDISRCLL*LGLVAHSYDPRLRE Trigger: CTCCCTAAGTCTGGGATCATAGCTGTGTGCCACTAGACCCAGCAACAGCAGACACCTTGAGATATCTTCTCCATTATCCCACAGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 90 bp | GTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATACTGATATaGTGCCATCTCTTGCCACCCATACACTGTGTGGGCATAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: VGGTTSLGSQRSILI*CHLLPPIHCVGIMF Trigger: AAACATTATGCCCACACAGTGTATGGGTGGCAAGAGATGGCACAATATCAGTATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 90 bp | GGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACACTTAAGTATGTaGAGCAGTATCCAGGGCCTCCACCCAGATAGCAGTAACATCTTT | + |
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Preference number: 2 (lower is better) Translates to: GLENSWKSCSGHLSM*SSIQGLHPDSSNIF Trigger: AAAGATGTTACTGCTATCTGGGTGGAGGCCCTGGATACTGCTCAACATACTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 90 bp | ACTTCCTTAGGAAGTCAGAGGTCAATACTGATATTGTGCCATCTCTaGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: TSLGSQRSILILCHL*PPIHCVGIMFVPGN Trigger: GTTACCAGGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAGATGGCACAATATCAGTATTGACCTCTGACTTCCTAAGGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 90 bp | CCTTCTGGGTTGAGTTTGTATCAGGGCTTCTCCATGTTAATACTATaGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: PSGLSLYQGFSMLIL*IFGARKFLEELLWT Trigger: TGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAGTATTAACATGGAGAAGCCCTGATACAAACTCAACCCAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCCCAGCTTGGGCCACATaGCACCTTGTCTCAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: FLNYTQQGSYVISTLCQCPAWAT*HLVSEN Trigger: GTTTTCTGAGACAAGGTGTCATGTGGCCCAAGCTGG...GCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATTACTCAACCTTCTGGGTTGAGTTTGTATCAGGGCTTCTCCATGTTAATACTGGTAAACTCACTGTaGGATAATGGAGAAGATATC | + |
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Preference number: 2 (lower is better) Translates to: FITQPSGLSLYQGFSMLILVNSL*DNGEDI Trigger: GATATCTTCTCCATTATCCCACAGTGAGTTTACCAG...TATTAACATGGAGAAGCCCTGATACAAACTCAACCCAGAAGGTTGAGTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR GCA 72 bp | CTGGTTGAGAGGAGTACAATCAATAACCCCAGTCACTaGTTTCATTCAAATTCTGGCCCAGAAGCACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LVERSTINNPSH*FHSNSGPEALL Trigger: GAGCAGTGCTTCTGGGCCAGAATTTGAATGAAAGCAGTGACTGGGGTTATTGATTGTACTCCTCTCAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CCA 72 bp | GCCAGTGCAGAGACTTTATTCCTGGTAAACTCACTGTaGGATAATGGAGAAGATATCTCAAGGTGTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: ASAETLFLVNSL*DNGEDISRCLL Trigger: CAGCAGACACCTTGAGATATCTTCTCCATTATCCCACAGTGAGTTTACCAGGAATAAAGTCTCTGCACTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CCA 72 bp | ATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTaGACACTTAAGTATGTTGAGCAGTATCCAGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: IFGARKFLEELL*TLKYVEQYPGP Trigger: AGGCCCTGGATACTGCTCAACATACTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR-3UTR CAA 90 bp | AAAACAAAAACAGGAGCTGAGTTTGATACGTTTGAGAACCACCAACCTCAACTGATATTGTGCCATCTCTaGCCACCCATACACTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: KTKTGAEFDTFENHQPQLILCHL*PPIHCV Trigger: CACACAGTGTATGGGTGGCAAGAGATGGCACAATAT...CAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGTTTTTGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR-3UTR CAA 90 bp | CTATTGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACACTTAAGAGGTCAATACTGATATaGTGCCATCTCTTGCCACCC | + |
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Preference number: 3 (lower is better) Translates to: LLIFGARKFLEELLWTLKRSILI*CHLLPP Trigger: GGGTGGCAAGAGATGGCACAATATCAGTATTGACCT...CTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR GCA 72 bp | CAACAAGGGTCATATGTTATTTCCACACTATGCCAGTaGAGAGACTTTATTCCTGGTAAACTCACTGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: QQGSYVISTLCQ*RDFIPGKLTVG Trigger: TCCCACAGTGAGTTTACCAGGAATAAAGTCTCTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR GCA 72 bp | TACACACAACAAGGGTCATATGTTATTTCCACACTATaGCAGTGCAGAGACTTTATTCCTGGTAAACTCACT | + |
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Preference number: 3 (lower is better) Translates to: YTQQGSYVISTL*QCRDFIPGKLT Trigger: AGTGAGTTTACCAGGAATAAAGTCTCTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CCA 72 bp | TTACATGCCAGCCTAGTGTTTTATTACTCAACCTTCTaGGTTGAGTTTGTATCAGGGCTTCTCCATGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: LHASLVFYYSTF*VEFVSGLLHVN Trigger: ATTAACATGGAGAAGCCCTGATACAAACTCAACCCAGAAGGTTGAGTAATAAAACACTAGGCTGGCATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CCA 72 bp | ACAAATATATTCAGAGAGATGAACAAGATGGTTTTCTaGGGTGGATGTGAAAACAATACTGGTAGGAGACCC | + |
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Preference number: 3 (lower is better) Translates to: TNIFREMNKMVF*GGCENNTGRRP Trigger: GGGTCTCCTACCAGTATTGTTTTCACATCCACCCCAGAAAACCATCTTGTTCATCTCTCTGAATATATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCAAACAGGAGCTGAGTTaGATACGTTTGAGAACCACC | + |
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Preference number: 3 (lower is better) Translates to: FLNYTQQGSYVISTLCQCKQELS*IRLRTT Trigger: GGTGGTTCTCAAACGTATCAAACTCAGCTCCTGTTT...GCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR-3UTR CAA 90 bp | CTATTGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACACTTAAGAACTGGGTTTCTGACTaGAATTCACATAGAAACACA | + |
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Preference number: 3 (lower is better) Translates to: LLIFGARKFLEELLWTLKNWVSD*NSHRNT Trigger: TGTGTTTCTATGTGAATTCAAGTCAGAAACCCAGTT...CTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | AACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATACTGCCAGCGTGCTTCCGCTaGTGCTGGGCCAGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: NLNCVGGTTSLGSQRSILPACFR*CWAREE Trigger: TTCCTCCCTGGCCCAGCATCAGCGGAAGCACGCTGG...CAGTATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 72 bp | GGACTGGTGGCAGCCGATCTTGGAGCTAAACCAGGATaGAGCGCCACAGTTCTGGGCAAAGGTGGAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GLVAADLGAKPG*SATVLGKGGSL Trigger: CAAGCTTCCACCTTTGCCCAGAACTGTGGCGCTCAATCCTGGTTTAGCTCCAAGATCGGCTGCCACCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | CACCAACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATGGCCTTTCCTCAGTGTaGGTCCGCAGGTGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HQPQLCGRHHFLRKSEVNGLSSV*VRRCRK Trigger: CTTCCTGCACCTGCGGACTCACACTGAGGAAAGGCC...ATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | ACAGGAGCTGAGTTTGATACGTTTGAGAACCACCAACCTCAACTGTGTGGGAGGGGGCCAGGGTTCTGCTaGCTTGTCCTGCCTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TGAEFDTFENHQPQLCGRGPGFC*LVLPLA Trigger: AGCCAAAGGCAGGACAAGCCAGCAGAACCCTGGCCC...CCTCCCACACAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR GCA 90 bp | CTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCTGGTAACTCAAAAGGTGCCTCCTCTGTCTaGCACCCACAGCTCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LLPPIHCVGIMFVPGNSKGASSV*HPQLST Trigger: GGTGCTGAGCTGTGGGTGGCAGACAGAGGAGGCACC...TTTTGAGTTACCAGGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | CACCAACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATTGTCCTGCCTTTGGCTaGGCAACAGGAAGCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: HQPQLCGRHHFLRKSEVNCPAFG*ATGSSL Trigger: AAGGGAGCTTCCTGTTGCCCAGCCAAAGGCAGGACA...ATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR GCA 90 bp | GAAGAGCTGCTCTGGACACTTAAGTATGTTGAGCAGTATCCAGGGCCTCCACCCCAGCTGGGAGATAACTaGAGGTTTGGGAAGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: EELLWTLKYVEQYPGPPPQLGDN*RFGKIR Trigger: CCTGATCTTCCCAAACCTGCAGTTATCTCCCAGCTG...GGGTGGAGGCCCTGGATACTGCTCAACATACTTAAGTGTCCAGAGCAGCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | CTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCTGGTAACTCAAAACGATACAGAGTCCTCTaGGTAGGGTCCAGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LLPPIHCVGIMFVPGNSKRYRVL*VGSSCP Trigger: GGGGCAGCTGGACCCTACCCAGAGGACTCTGTATCG...TTTTGAGTTACCAGGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | GATATTGTGCCATCTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCGGGAGGAACTGTGCCTaGAGCCCTTTCCACAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: DIVPSLATHTLCGHNVCAGRNCA*SPFHSD Trigger: ATCACTGTGGAAAGGGCTTCAGGCACAGTTCCTCCC...GGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAGATGGCACAATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR GCA 90 bp | TTTATTACTCAACCTTCTGGGTTGAGTTTGTATCAGGGCTTCTCCATGTTAATAGATGGCAGGCCCCGGTaGCTCCTCTGTCTGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: FITQPSGLSLYQGFSMLIDGRPR*LLCLPP Trigger: GGGTGGCAGACAGAGGAGGCACCGGGGCCTGCCATC...TATTAACATGGAGAAGCCCTGATACAAACTCAACCCAGAAGGTTGAGTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR GCA 90 bp | CTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCTGGTAACTCAAAACTGGTCCTTCTTGAGTaGCTGCCTCTGGCCATCACT | + |
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Preference number: 4 (lower is better) Translates to: LLPPIHCVGIMFVPGNSKLVLLE*LPLAIT Trigger: AGTGATGGCCAGAGGCAGGCACTCAAGAAGGACCAG...TTTTGAGTTACCAGGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | TTAAGTTGCAGGGACAAAAATGACTCCACATATTACCAAATGTCCTCTGAGGTCAGAATCCAGCCTGGATaGCAGGCCCCGGTGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LSCRDKNDSTYYQMSSEVRIQPG*QAPVPP Trigger: AGGAGGCACCGGGGCCTGCCATCCAGGCTGGATTCT...GACCTCAGAGGACATTTGGTAATATGTGGAGTCATTTTTGTCCCTGCAACTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | CTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCTGGTAACTCAAAACCTAGGGATGAATTCTaGTTGAAGGCCCTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LLPPIHCVGIMFVPGNSKPRDEF*LKALPQ Trigger: CTGTGGGAGGGCCTTCAATCAGAATTCATCCCTAGG...TTTTGAGTTACCAGGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | CACCAACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATGGTGAGAACTCTGAGTaGAACACTTTCCACACTGAT | + |
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Preference number: 4 (lower is better) Translates to: HQPQLCGRHHFLRKSEVNGENSE*NTFHTD Trigger: ATCAGTGTGGAAAGTGTTTCACTCAGAGTTCTCACC...ATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | AACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATACTGATCTCGGAAAGTCACTaGCTCCTGAAGTTGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: NLNCVGGTTSLGSQRSILISESH*LLKLCC Trigger: GCAACACAACTTCAGGAGCCAGTGACTTTCCGAGAT...CAGTATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | GATATTGTGCCATCTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCGCACCTTGTTCCAGCTaGGAGATAACTGCAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: DIVPSLATHTLCGHNVCAAPCSS*EITAGL Trigger: CAAACCTGCAGTTATCTCCCAGCTGGAACAAGGTGC...GGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAGATGGCACAATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 72 bp | ACCACTTCCTTAGGAAGTCAGAGGTCAATACTGATATaGTGCCATCTCTTGCCACCCATACACTGTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TTSLGSQRSILI*CHLLPPIHCVG Trigger: GCCCACACAGTGTATGGGTGGCAAGAGATGGCACAATATCAGTATTGACCTCTGACTTCCTAAGGAAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 72 bp | TGGGATAATGGAGAAGATATCTCAAGGTGTCTGCTGTaGCTGGGTCTAGTGGCACACAGCTATGATCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: WDNGEDISRCLL*LGLVAHSYDPR Trigger: TCTGGGATCATAGCTGTGTGCCACTAGACCCAGCAACAGCAGACACCTTGAGATATCTTCTCCATTATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| 3UTR CAA 72 bp | AATTCTTGGAAGAGCTGCTCTGGACACTTAAGTATGTaGAGCAGTATCCAGGGCCTCCACCCAGATAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: NSWKSCSGHLSM*SSIQGLHPDSS Trigger: ACTGCTATCTGGGTGGAGGCCCTGGATACTGCTCAACATACTTAAGTGTCCAGAGCAGCTCTTCCAAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGCTCTGGACACTTAAGTATGTTGAGCAGTATCCAGGGCCTCCACCCTGCGTTATGGTTAAATaGCTTCCCACAATCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: EELLWTLKYVEQYPGPPPCVMVK*LPTIST Trigger: TGTACTGATTGTGGGAAGTCATTTAACCATAACGCA...GGGTGGAGGCCCTGGATACTGCTCAACATACTTAAGTGTCCAGAGCAGCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | CTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCTGGTAACTCAAAATGGATTCGCTCATGTTaGACAAGGGAGGAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPPIHCVGIMFVPGNSKWIRSC*TREEFW Trigger: CCAGAACTCCTCCCTTGTTCAACATGAGCGAATCCA...TTTTGAGTTACCAGGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR GCA 90 bp | CTATTGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACACTTAAGACAGGGCCAGGGTTCTaGTGGCTTGTCCTGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLIFGARKFLEELLWTLKTGPGF*WLVLPL Trigger: CAAAGGCAGGACAAGCCAGCAGAACCCTGGCCCTGT...CTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR GCA 90 bp | CACCAACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATACAGGGTTTTGCTCCTaGATAATTTCACGAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: HQPQLCGRHHFLRKSEVNTGFCS*IISRRS Trigger: TGACCTTCGTGAAATTATGCAGGAGCAAAACCCTGT...ATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | AAAACAAAAACAGGAGCTGAGTTTGATACGTTTGAGAACCACCAACCTCAACTGGGCTTGTCCTGCCTTTaGCTGGGCAACAGGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KTKTGAEFDTFENHQPQLGLSCL*LGNRKL Trigger: GAGCTTCCTGTTGCCCAGCCAAAGGCAGGACAAGCC...CAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGTTTTTGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR CCA 90 bp | CACCAACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATGAAGTGGTATCTCTTTaGGGTCATTCAAGTTACTCT | + |
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Preference number: 4 (lower is better) Translates to: HQPQLCGRHHFLRKSEVNEVVSL*GHSSYS Trigger: AGAGTAACTTGAATGACCCCAAAGAGATACCACTTC...ATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS-3UTR TCA 90 bp | CTATTGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACACTTAAGGGGATGAATTCTGATTaGAGGCCCTCCCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLIFGARKFLEELLWTLKGMNSD*RPSHSP Trigger: AGGACTGTGGGAGGGCCTTCAATCAGAATTCATCCC...CTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR GCA 90 bp | GATATTGTGCCATCTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCACAAGGAACAGCCTTTaGAAACCCATCCTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DIVPSLATHTLCGHNVCATRNSL*KPILFC Trigger: ACAGAAAAGGATGGGTTTGCAAAGGCTGTTCCTTGT...GGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAGATGGCACAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR GCA 90 bp | AACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATACTGCAAAGGCTTTTTGACTaGCATTGTCATCAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NLNCVGGTTSLGSQRSILQRLFD*HCHQRT Trigger: AGTCCTTTGATGACAATGGCAGTCAAAAAGCCTTTG...CAGTATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CCA 90 bp | AAAACAAAAACAGGAGCTGAGTTTGATACGTTTGAGAACCACCAACCTCAACTGGGATGGTTCCATTTTTaGGAGGCCCTGGTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTKTGAEFDTFENHQPQLGWFHF*EALVLE Trigger: CTCAAGGACCAGGGCCTCCCAAAAATGGAACCATCC...CAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGTTTTTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR TCA 90 bp | GATATTGTGCCATCTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCAAACACTTTCCACACTaGTTACACTTAAAGGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: DIVPSLATHTLCGHNVCAKHFPH*LHLKGL Trigger: TAGGCCCTTTAAGTGTAATCAGTGTGGAAAGTGTTT...GGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAGATGGCACAATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| 3UTR CAA 72 bp | GGTCATCCTTGGATATATAGTGAGTTTGAGGCCAGCTaGGGCCACATGACACCTTGTCTCAGAAAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GHPWIYSEFEAS*GHMTPCLRKQK Trigger: TTTTTGTTTTCTGAGACAAGGTGTCATGTGGCCCAAGCTGGCCTCAAACTCACTATATATCCAAGGATGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| 3UTR CAA 72 bp | ACACCTTGTCTCAGAAAACAAAAACAGGAGCTGAGTTaGATACGTTTGAGAACCACCAACCTCAACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPCLRKQKQELS*IRLRTTNLNCV Trigger: CACACAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGTTTTTGTTTTCTGAGACAAGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTACTCAACCTTCTGGGTTGAGTTTGTATCAGGGCTTCTCCATGTTAATAATCAAAGGACTGTGTTaGAGGGGAGTCTGTCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FITQPSGLSLYQGFSMLIIKGLC*RGVCPL Trigger: CAACGGACAGACTCCCCTGCAACACAGTCCTTTGAT...TATTAACATGGAGAAGCCCTGATACAAACTCAACCCAGAAGGTTGAGTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCAGATTAAAGCCGGCGCCTaGTCAAAGATCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKLHTTRVICYFHTMPVQIKAGA*SKISLC Trigger: ACAGAGGCTGATCTTTGAGCAGGCGCCGGCTTTAAT...CTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR GCA 90 bp | AAAACAAAAACAGGAGCTGAGTTTGATACGTTTGAGAACCACCAACCTCAACTGCAAACAGCATGGAGTTaGCCACTGAAGGTTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KTKTGAEFDTFENHQPQLQTAWS*PLKVLL Trigger: TAGAAGAACCTTCAGTGGGCAACTCCATGCTGTTTG...CAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGTTTTTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGTTGCAGGGACAAAAATGACTCCACATATTACCAAATGTCCTCTGAGGTCGTGATTACACTCGTATaGCCTTTCCTCAGTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCRDKNDSTYYQMSSEVVITLV*PFLSVS Trigger: ACTCACACTGAGGAAAGGCCATACGAGTGTAATCAC...GACCTCAGAGGACATTTGGTAATATGTGGAGTCATTTTTGTCCCTGCAACTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR GCA 90 bp | CTATTGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACACTTAAGACATGCACAGGGTTTTaGTCCTGCATAATTTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LLIFGARKFLEELLWTLKTCTGF*SCIISR Trigger: TCGTGAAATTATGCAGGAGCAAAACCCTGTGCATGT...CTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGTTGCAGGGACAAAAATGACTCCACATATTACCAAATGTCCTCTGAGGTCGGTTTATCTTGCACCTaGCTTTTTGTGAGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSCRDKNDSTYYQMSSEVGLSCT*LFVSSV Trigger: TACAGAACTCACAAAAAGTCAGGTGCAAGATAAACC...GACCTCAGAGGACATTTGGTAATATGTGGAGTCATTTTTGTCCCTGCAACTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| 3UTR CAA 72 bp | TTGAGTTTGTATCAGGGCTTCTCCATGTTAATACTATaGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLYQGFSMLIL*IFGARKFLEEL Trigger: CAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAGTATTAACATGGAGAAGCCCTGATACAAACTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCGTGAGATGTGCGTTATaGTTAAATGACTTCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FLNYTQQGSYVISTLCQCVRCAL*LNDFPQ Trigger: TTGTGGGAAGTCATTTAACCATAACGCACATCTCAC...GCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CCA 90 bp | GTGCCTCCTCTGTCTGCCACCCACAGCTCAGCACCTTGTTCCAGCTaGGAGATAACTGCAGGTTTGGGAAGATCAGGACCCACAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPPLSATHSSAPCSS*EITAGLGRSGPTER Trigger: TCTCTCTGTGGGTCCTGATCTTCCCAAACCTGCAGTTATCTCCCAGCTGGAACAAGGTGCTGAGCTGTGGGTGGCAGACAGAGGAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGCTGAGTTTGATACGTTTGAGAACCACCAACCTCAACTGTGTGGGAGGCAGGGTTCTGCTGGCTaGTCCTGCCTTTGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGAEFDTFENHQPQLCGRQGSAG*SCLWLG Trigger: GCCCAGCCAAAGGCAGGACAAGCCAGCAGAACCCTG...CCTCCCACACAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS TCA 90 bp | GCTGGGCAACAGGAAGCTCCCTTGAATTTGAGTTTGTATTCTGAATaGGTCTTGAGCCCCGTCTACACGGCTGTTCTTGCCTTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: AGQQEAPLNLSLYSE*VLSPVYTAVLAFCY Trigger: GTAGCAGAAGGCAAGAACAGCCGTGTAGACGGGGCTCAAGACTCATTCAGAATACAAACTCAAATTCAAGGGAGCTTCCTGTTGCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS TCA 90 bp | TTTGGCTGGGCAACAGGAAGCTCCCTTGAATTTGAGTTTGTATTCTaGATGAGTCTTGAGCCCCGTCTACACGGCTGTTCTTGCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FGWATGSSLEFEFVF*MSLEPRLHGCSCLL Trigger: CAGAAGGCAAGAACAGCCGTGTAGACGGGGCTCAAGACTCATTCAGAATACAAACTCAAATTCAAGGGAGCTTCCTGTTGCCCAGCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCAGGCTCCTGAAGTTGTGTaGCTTGCGGCCGCGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKLHTTRVICYFHTMPVQAPEVV*LAAARP Trigger: TGGCCTCGCGGCCGCAAGCAACACAACTTCAGGAGC...CTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGCTGCTCTGGACACTTAAGTATGTTGAGCAGTATCCAGGGCCTCCACCCCTTATAGGGTTTATCTaGCACCTGACTTTTTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EELLWTLKYVEQYPGPPPLIGFI*HLTFCE Trigger: CTCACAAAAAGTCAGGTGCAAGATAAACCCTATAAG...GGGTGGAGGCCCTGGATACTGCTCAACATACTTAAGTGTCCAGAGCAGCTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS GCA 90 bp | TGGTATCTCTTTGGGGTCATTCAAGTTACTCTGGTCCTTCTTGAGTaGCTGCCTCTGGCCATCACTTTCCTGATCTATCCCTATCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: WYLFGVIQVTLVLLE*LPLAITFLIYPYHR Trigger: TCTATGATAGGGATAGATCAGGAAAGTGATGGCCAGAGGCAGGCACTCAAGAAGGACCAGAGTAACTTGAATGACCCCAAAGAGATACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCAGCTGAAGTTGTGTTGCTaGCGGCCGCGAGGCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FKLHTTRVICYFHTMPVQLKLCC*RPRGHC Trigger: GCAATGGCCTCGCGGCCGCAAGCAACACAACTTCAG...CTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | AACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATACTGTTTGTGGCTTTGACTTaGAAGTGGTATCTCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NLNCVGGTTSLGSQRSILFVALT*KWYLFG Trigger: CCCAAAGAGATACCACTTCAAAGTCAAAGCCACAAA...CAGTATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | CACCAACCTCAACTGTGTGGGAGGCACCACTTCCTTAGGAAGTCAGAGGTCAATTTGATCAAAGGCTTTTaGACTGCCATTGTCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HQPQLCGRHHFLRKSEVNLIKGF*TAIVIK Trigger: TTTGATGACAATGGCAGTCAAAAAGCCTTTGATCAA...ATTGACCTCTGACTTCCTAAGGAAGTGGTGCCTCCCACACAGTTGAGGTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | CTATTGATATTTGGGGCTAGAAAATTCTTGGAAGAGCTGCTCTGGACACTTAAGGGGCCTATCACTCCGTaGAGTCCTTTCACCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LLIFGARKFLEELLWTLKGPITP*SPFTLT Trigger: AGTCAAGGTGAAAGGACTCAACGGAGTGATAGGCCC...CTTAAGTGTCCAGAGCAGCTCTTCCAAGAATTTTCTAGCCCCAAATATCAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGCTGAGTTTGATACGTTTGAGAACCACCAACCTCAACTGTGTGGGAGGCAACAGGAAGCTCCCTaGAATTTGAGTTTGTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGAEFDTFENHQPQLCGRQQEAP*NLSLYS Trigger: AGAATACAAACTCAAATTCAAGGGAGCTTCCTGTTG...CCTCCCACACAGTTGAGGTTGGTGGTTCTCAAACGTATCAAACTCAGCTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCAGTGGCTTGTCCTGCCTTaGGCTGGGCAACAGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FKLHTTRVICYFHTMPVQWLVLP*AGQQEA Trigger: AGCTTCCTGTTGCCCAGCCAAAGGCAGGACAAGCCA...CTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCCACCCATACACTGTGTGGGCATAATGTTTGTGCCTGGTAACTCAAAAAACATGCACAGGGTTTaGCTCCTGCATAATTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LLPPIHCVGIMFVPGNSKNMHRV*LLHNFT Trigger: CGTGAAATTATGCAGGAGCAAAACCCTGTGCATGTT...TTTTGAGTTACCAGGCACAAACATTATGCCCACACAGTGTATGGGTGGCAAGAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCAGAGGCCATTGCCACTGTaGCTGCTTTGTCCTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FKLHTTRVICYFHTMPVQRPLPL*LLCPGG Trigger: ACCACCAGGACAAAGCAGCAACAGTGGCAATGGCCT...CTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCCCACAGCTCAGCACCTaGTTCCAGCTGGGAGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: FLNYTQQGSYVISTLCQCPQLST*FQLGDN Trigger: GTTATCTCCCAGCTGGAACAAGGTGCTGAGCTGTGG...GCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAATTACACACAACAAGGGTCATATGTTATTTCCACACTATGCCAGTGCAGGAGATAACTGCAGGTTaGGGAAGATCAGGACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FKLHTTRVICYFHTMPVQEITAG*GRSGPT Trigger: TGTGGGTCCTGATCTTCCCAAACCTGCAGTTATCTC...CTGCACTGGCATAGTGTGGAAATAACATATGACCCTTGTTGTGTGTAATTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTACTCAACCTTCTGGGTTGAGTTTGTATCAGGGCTTCTCCATGTTAATAGACAAGGAACAGCCTTaGCAAACCCATCCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FITQPSGLSLYQGFSMLIDKEQP*QTHPFL Trigger: CAGAAAAGGATGGGTTTGCAAAGGCTGTTCCTTGTC...TATTAACATGGAGAAGCCCTGATACAAACTCAACCCAGAAGGTTGAGTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CCA 72 bp | AATGTGTGGTCTTCAGGTTCAAGAATCCAGCCTGGATaGCAGGCCCCGGTGCCTCCTCTGTCTGCCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: NVWSSGSRIQPG*QAPVPPLSATH Trigger: GTGGGTGGCAGACAGAGGAGGCACCGGGGCCTGCCATCCAGGCTGGATTCTTGAACCTGAAGACCACACATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CAA 72 bp | CCACATCTCGGAAAGTCACTGGCTCCTGAAGTTGTGTaGCTTGCGGCCGCGAGGCCATTGCCACTGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PHLGKSLAPEVV*LAAARPLPLLL Trigger: CAGCAACAGTGGCAATGGCCTCGCGGCCGCAAGCAACACAACTTCAGGAGCCAGTGACTTTCCGAGATGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CAA 72 bp | TTCACGAAGGTCAAACAGGGCCAGGGTTCTGCTGGCTaGTCCTGCCTTTGGCTGGGCAACAGGAAGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: FTKVKQGQGSAG*SCLWLGNRKLP Trigger: AGGGAGCTTCCTGTTGCCCAGCCAAAGGCAGGACAAGCCAGCAGAACCCTGGCCCTGTTTGACCTTCGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CCA 72 bp | CTGTCTGCCACCCACAGCTCAGCACCTTGTTCCAGCTaGGAGATAACTGCAGGTTTGGGAAGATCAGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LSATHSSAPCSS*EITAGLGRSGP Trigger: GGGTCCTGATCTTCCCAAACCTGCAGTTATCTCCCAGCTGGAACAAGGTGCTGAGCTGTGGGTGGCAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CCA 72 bp | TCCATTTTTGGGAGGCCCTGGTCCTTGAGCAATGTGTaGTCTTCAGGTTCAAGAATCCAGCCTGGATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SIFGRPWSLSNV*SSGSRIQPGWQ Trigger: CTGCCATCCAGGCTGGATTCTTGAACCTGAAGACCACACATTGCTCAAGGACCAGGGCCTCCCAAAAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CAA 90 bp | CACGAAGGTCAAACAGGGCCAGGGTTCTGCTGGCTTGTCCTGCCTTaGGCTGGGCAACAGGAAGCTCCCTTGAATTTGAGTTTGTATTCT | + |
|
Preference number: 6 (lower is better) Translates to: HEGQTGPGFCWLVLP*AGQQEAPLNLSLYS Trigger: AGAATACAAACTCAAATTCAAGGGAGCTTCCTGTTGCCCAGCCAAAGGCAGGACAAGCCAGCAGAACCCTGGCCCTGTTTGACCTTCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS TCA 72 bp | ATCACTCCGTTGAGTCCTTTCACCTTGACTCAACGGTaGGTCACAGCCGAGGGGTTCTGTCCATTCGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: ITPLSPFTLTQR*VTAEGFCPFVL Trigger: AAGTACGAATGGACAGAACCCCTCGGCTGTGACTCACCGTTGAGTCAAGGTGAAAGGACTCAACGGAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS GCA 72 bp | TTTGGGGTCATTCAAGTTACTCTGGTCCTTCTTGAGTaGCTGCCTCTGGCCATCACTTTCCTGATCTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: FGVIQVTLVLLE*LPLAITFLIYP Trigger: GGGATAGATCAGGAAAGTGATGGCCAGAGGCAGGCACTCAAGAAGGACCAGAGTAACTTGAATGACCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CCA 72 bp | TCTGTAATAGGGGATGGTTCCATTTTTGGGAGGCCCTaGTCCTTGAGCAATGTGTGGTCTTCAGGTTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVIGDGSIFGRP*SLSNVWSSGSR Trigger: TCTTGAACCTGAAGACCACACATTGCTCAAGGACCAGGGCCTCCCAAAAATGGAACCATCCCCTATTACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS TCA 72 bp | GCAACAGGAAGCTCCCTTGAATTTGAGTTTGTATTCTaGATGAGTCTTGAGCCCCGTCTACACGGCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATGSSLEFEFVF*MSLEPRLHGCS Trigger: AGAACAGCCGTGTAGACGGGGCTCAAGACTCATTCAGAATACAAACTCAAATTCAAGGGAGCTTCCTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS TCA 72 bp | AGATTCTCTGGTGTCAAACAGCATGGAGTTGCCCACTaGAGGTTCTTCTACCCCAATAACATGCACAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RFSGVKQHGVAH*RFFYPNNMHRV Trigger: AACCCTGTGCATGTTATTGGGGTAGAAGAACCTTCAGTGGGCAACTCCATGCTGTTTGACACCAGAGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS GCA 72 bp | TCTTCTACCCCAATAACATGCACAGGGTTTTGCTCCTaGATAATTTCACGAAGGTCAAACAGGGCCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSTPITCTGFCS*IISRRSNRARV Trigger: AACCCTGGCCCTGTTTGACCTTCGTGAAATTATGCAGGAGCAAAACCCTGTGCATGTTATTGGGGTAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS GCA 72 bp | ATCTATCCCTATCATAGAACGACAAGGAACAGCCTTTaGAAACCCATCCTTTTCTGTAATAGGGGATGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: IYPYHRTTRNSL*KPILFCNRGWF Trigger: GAACCATCCCCTATTACAGAAAAGGATGGGTTTGCAAAGGCTGTTCCTTGTCGTTCTATGATAGGGATAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
||
| CDS CCA 72 bp | CACAAGTCCAAGACTTTTGTGGCTTTGACTTTGAAGTaGTATCTCTTTGGGGTCATTCAAGTTACTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HKSKTFVALTLK*YLFGVIQVTLV Trigger: GACCAGAGTAACTTGAATGACCCCAAAGAGATACCACTTCAAAGTCAAAGCCACAAAAGTCTTGGACTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS CAA 72 bp | GGCTTCCACAAGTCCAAGACTTTTGTGGCTTTGACTTaGAAGTGGTATCTCTTTGGGGTCATTCAAGTTACT | + |
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Preference number: 6 (lower is better) Translates to: GFHKSKTFVALT*KWYLFGVIQVT Trigger: AGTAACTTGAATGACCCCAAAGAGATACCACTTCAAAGTCAAAGCCACAAAAGTCTTGGACTTGTGGAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS CAA 72 bp | GAGTTCTGTAATGGGCATAATTTGATCAAAGGCTTTTaGACTGCCATTGTCATCAAAGGACTGTGTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: EFCNGHNLIKGF*TAIVIKGLCCR Trigger: CCTGCAACACAGTCCTTTGATGACAATGGCAGTCAAAAAGCCTTTGATCAAATTATGCCCATTACAGAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS CAA 90 bp | TTTATCTTGCACCTGACTTTTTGTGAGTTCTGTAATGGGCATAATTaGATCAAAGGCTTTTTGACTGCCATTGTCATCAAAGGACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: FILHLTFCEFCNGHN*IKGFLTAIVIKGLC Trigger: ACACAGTCCTTTGATGACAATGGCAGTCAAAAAGCCTTTGATCAAATTATGCCCATTACAGAACTCACAAAAAGTCAGGTGCAAGATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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| CDS CAA 72 bp | CACCTGACTTTTTGTGAGTTCTGTAATGGGCATAATTaGATCAAAGGCTTTTTGACTGCCATTGTCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: HLTFCEFCNGHN*IKGFLTAIVIK Trigger: TTTGATGACAATGGCAGTCAAAAAGCCTTTGATCAAATTATGCCCATTACAGAACTCACAAAAAGTCAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144578.2 |
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