Pregenerated sensors for ZFP120 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068134Ensembl transcript IDs: ENSMUST00000089207.13, ENSMUST00000094538.6, ENSMUST00000109931.8, ENSMUST00000122859.8
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCATTTAATCATATGGTACACCTAATTCAAGTTCCCTGGCCCTaGAGTAGCTGGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTC | + |
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Preference number: 1 (lower is better) Translates to: PPFNHMVHLIQVPWP*SSWDLPNSRPASIV Trigger: GACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGGGCCAGGGAACTTGAATTAGGTGTACCATATGATTAAATGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR TCA 90 bp | GAAACTGCTGTGCAGTCATATTCACAGCCATGTTACACCTGGCACTaGATGCAAGGGTGCTGGCTACAGACCTCATCAAATCCTTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: ETAVQSYSQPCYTWH*MQGCWLQTSSNPLV Trigger: GACTAAAGGATTTGATGAGGTCTGTAGCCAGCACCCTTGCATTCAGTGCCAGGTGTAACATGGCTGTGAATATGACTGCACAGCAGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR CCA 90 bp | AATCATATGGTACACCTAATTCAAGTTCCCTGGCCCTGCAGTAGCTaGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTCCATCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: NHMVHLIQVPWPCSS*DLPNSRPASIVHLC Trigger: ACAAAGATGGACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGGGCCAGGGAACTTGAATTAGGTGTACCATATGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR GCA 90 bp | TTCTACAACATGTGTTCTTCTCTGTATTTGGAGACTACTGTGATGTaGAAAGTCTTCAAAATATTGGACACCTTCATAGGGTTTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: FYNMCSSLYLETTVM*KVFKILDTFIGFLS Trigger: GGAGAGAAACCCTATGAAGGTGTCCAATATTTTGAAGACTTTGCACATCACAGTAGTCTCCAAATACAGAGAAGAACACATGTTGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGTAGCTGGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTCCATCTTTTGGCCCTGCAGTAGCTaGGACCTTCCCAATAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PAVAGTFPIAGQLLLSIFWPCSS*DLPNSR Trigger: CCTGCTATTGGGAAGGTCCCAGCTACTGCAGGGCCA...AAAGATGGACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | TTCGGATTGAAGGTGCTCCCACAGCTGAAACTGCTGTGCAGTCATATTCACAGCTGGCCCTGCAGTAGCTaGGACCTTCCCAATAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FGLKVLPQLKLLCSHIHSWPCSS*DLPNSR Trigger: CCTGCTATTGGGAAGGTCCCAGCTACTGCAGGGCCA...GCTGTGAATATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCTTCAATCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TTCGGATTGAAGGTGCTCCCACAGCTGAAACTGCTGTGCAGTCATATTCACAGCAGGTGCTCCCACAGCTaGAACTGCTGTGCAGTCATA | + |
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Preference number: 2 (lower is better) Translates to: FGLKVLPQLKLLCSHIHSRCSHS*NCCAVI Trigger: TATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCT...GCTGTGAATATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCTTCAATCCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACTCTCACCATTGCTTCCTTAACCAGTAGACCCAGCTATTTCTTCCTCTATTGGCCCTGCAGTAGCTaGGACCTTCCCAATAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GTLTIASLTSRPSYFFLYWPCSS*DLPNSR Trigger: CCTGCTATTGGGAAGGTCCCAGCTACTGCAGGGCCA...ATAGAGGAAGAAATAGCTGGGTCTACTGGTTAAGGAAGCAATGGTGAGAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGTAGCTGGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTCCATCTTTGCCTTTGAACATGTCTaGCATGCAAAGGCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: PAVAGTFPIAGQLLLSIFAFEHV*HAKALP Trigger: TGGTAAAGCCTTTGCATGTCAGACATGTTCAAAGGC...AAAGATGGACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTAACTCTCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGAGGTGCTCCCACAGCTaGAACTGCTGTGCAGTCATA | + |
|
Preference number: 2 (lower is better) Translates to: TFNSQKNLHITDHLGINLRCSHS*NCCAVI Trigger: TATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCT...CAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGAGAGTTAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCATTGTGTTTTCTATAGCCATCCCTGCTCTTAGTGACCCAAGCCCCATGAGAGATCTCCTCTCATaGGGACTCTCACCATTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LFIVFSIAIPALSDPSPMRDLLS*GLSPLL Trigger: AAGCAATGGTGAGAGTCCCCATGAGAGGAGATCTCT...CATGGGGCTTGGGTCACTAAGAGCAGGGATGGCTATAGAAAACACAATGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TTCGGATTGAAGGTGCTCCCACAGCTGAAACTGCTGTGCAGTCATATTCACAGCTTCACGAAATCATATTaGCTGTCTCTAACCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: FGLKVLPQLKLLCSHIHSFTKSY*LSLTMA Trigger: AGCCATGGTTAGAGACAGTCAATATGATTTCGTGAA...GCTGTGAATATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCTTCAATCCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGTAGTTACAGAAAACTCATTGCTGTTCTaGAGCTGTGCTCGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SEEPPHHRPSGHKLVVTENSLLF*SCARRQ Trigger: CTGTCTCCGAGCACAGCTTCAGAACAGCAATGAGTT...TTCTGTAACTACAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | TTCGGATTGAAGGTGCTCCCACAGCTGAAACTGCTGTGCAGTCATATTCACAGCAAGACGGCCATGATATaGAAAAGCTTTACCACATTG | + |
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Preference number: 2 (lower is better) Translates to: FGLKVLPQLKLLCSHIHSKTAMI*KSFTTL Trigger: CAATGTGGTAAAGCTTTTGCATATCATGGCCGTCTT...GCTGTGAATATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCTTCAATCCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGTAGTTACAGAACTTTGGAGAGAACTGTaGCGTCCAAAGGCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: SEEPPHHRPSGHKLVVTELWREL*RPKALP Trigger: TGGTAAAGCCTTTGGACGTCACAGTTCTCTCCAAAG...TTCTGTAACTACAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | TCAACGGACCCCATAAAACAAAGGCTCCCACTCACAGAATTTCTCTCCAGTATGGAGTTTGAGTTTTGTTaGATCTCAACGGACCCCATA | + |
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Preference number: 2 (lower is better) Translates to: STDPIKQRLPLTEFLSSMEFEFC*ISTDPI Trigger: TATGGGGTCCGTTGAGATCCAACAAAACTCAAACTC...CATACTGGAGAGAAATTCTGTGAGTGGGAGCCTTTGTTTTATGGGGTCCGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTCTTTGGAGAGAACTGTaGCGTCCAAAGGCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: KNKEQLTICNRSSSGRTSLWREL*RPKALP Trigger: TGGTAAAGCCTTTGGACGTCACAGTTCTCTCCAAAG...ACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAATGCAAGGGTGCTGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCAAGACGGCCATGATATaGAAAAGCTTTACCACATTG | + |
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Preference number: 2 (lower is better) Translates to: LNARVLATDLIKSFSHRFKTAMI*KSFTTL Trigger: CAATGTGGTAAAGCTTTTGCATATCATGGCCGTCTT...GAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCAGCACCCTTGCATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGGAACTTAAAAGCTCTGTACCACTCCTGCTCTGGGTCGGGAAGTGGTTCGAAAATGCCTGTGATATaGAACTGTTGGAAACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: FWNLKALYHSCSGSGSGSKMPVI*NCWKQV Trigger: TACTTGTTTCCAACAGTTGCATATCACAGGCATTTT...CGAACCACTTCCCGACCCAGAGCAGGAGTGGTACAGAGCTTTTAAGTTCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACGGACCCCATAAAACAAAGGCTCCCACTCACAGAATTTCTCTCCAGTATGGAGACTATTGTGACATaGAAAGGCTTTACCACATTG | + |
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Preference number: 2 (lower is better) Translates to: STDPIKQRLPLTEFLSSMETIVT*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCATGTCACAATAGTCTC...CATACTGGAGAGAAATTCTGTGAGTGGGAGCCTTTGTTTTATGGGGTCCGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCGGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGAGTTTGAGTTTTGTTaGATCTCAACGGACCCCATA | + |
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Preference number: 2 (lower is better) Translates to: VLGDSLKVLSLSSPQSFIEFEFC*ISTDPI Trigger: TATGGGGTCCGTTGAGATCCAACAAAACTCAAACTC...AATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCCGAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | TTCGGATTGAAGGTGCTCCCACAGCTGAAACTGCTGTGCAGTCATATTCACAGCAATGGAGCTATAACTTaGCACAGATATTTCTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: FGLKVLPQLKLLCSHIHSNGAIT*HRYFWF Trigger: AAACCAGAAATATCTGTGCCAAGTTATAGCTCCATT...GCTGTGAATATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCTTCAATCCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTGCCTTTGAACATGTCTaGCATGCAAAGGCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: KNKEQLTICNRSSSGRTSAFEHV*HAKALP Trigger: TGGTAAAGCCTTTGCATGTCAGACATGTTCAAAGGC...ACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACTCTCACCATTGCTTCCTTAACCAGTAGACCCAGCTATTTCTTCCTCTATCTTCCTCCAATTTACTaGACTCCTCCAAATATCTAT | + |
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Preference number: 2 (lower is better) Translates to: GTLTIASLTSRPSYFFLYLPPIY*TPPNIY Trigger: ATAGATATTTGGAGGAGTTCAGTAAATTGGAGGAAG...ATAGAGGAAGAAATAGCTGGGTCTACTGGTTAAGGAAGCAATGGTGAGAGTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TCAACGGACCCCATAAAACAAAGGCTCCCACTCACAGAATTTCTCTCCAGTATGATTTGGAGACTACTGTaGTGTGCAAAGTCTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: STDPIKQRLPLTEFLSSMIWRLL*CAKSSK Trigger: TTTTGAAGACTTTGCACATCACAGTAGTCTCCAAAT...CATACTGGAGAGAAATTCTGTGAGTGGGAGCCTTTGTTTTATGGGGTCCGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGTTTTTAGCTTGTCTAACTGCAGAATCTCTTCCTCCAATTTACTGAACTCCCAGCTGAAACTGCTGTaGAGTCATATTCACAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RVFSLSNCRISSSNLLNSQLKLL*SHIHSH Trigger: ATGGCTGTGAATATGACTGCACAGCAGTTTCAGCTG...GGAGTTCAGTAAATTGGAGGAAGAGATTCTGCAGTTAGACAAGCTAAAAACACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACAGAGATGACTGTTTCGTaGAAAGGCTTTACCACATTG | + |
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Preference number: 2 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTEMTVS*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACGAAACAGTCATCTC...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGTATGTGGTCTTTTATGTATCTGGAGACTATTGTAACATCCACAGTCTTGCCTTTGAACATGTCTaGCATGCAAAGGCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: LQYVVFYVSGDYCNIHSLAFEHV*HAKALP Trigger: TGGTAAAGCCTTTGCATGTCAGACATGTTCAAAGGC...AAGACTGTGGATGTTACAATAGTCTCCAGATACATAAAAGACCACATACTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACCCAATTTCTGTGAGCTaGCAGAAATTTCTTAGACCT | + |
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Preference number: 2 (lower is better) Translates to: GDSLKVLSLSSPQSFIGYPISVS*QKFLRP Trigger: AGGTCTAAGAAATTTCTGTCAGCTCACAGAAATTGG...GTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTAACTCTCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGCCAATTTCTGTGAGCTaGCAGAAATTTCTTAGACCT | + |
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Preference number: 2 (lower is better) Translates to: TFNSQKNLHITDHLGINLPISVS*QKFLRP Trigger: AGGTCTAAGAAATTTCTGTCAGCTCACAGAAATTGG...CAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGAGAGTTAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCTGCCAGAGGGTTAAATaGTCCAATCTTTCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: WLQTSSNPLVTDSFQYQFCQRVK*SNLSRK Trigger: CTTCCTGGAAAGATTGGATCATTTAACCCTCTGGCA...GAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAATGCAAGGGTGCTGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCAAAATGCCTGTGATATaGAACTGTTGGAAACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LNARVLATDLIKSFSHRFKMPVI*NCWKQV Trigger: TACTTGTTTCCAACAGTTGCATATCACAGGCATTTT...GAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCAGCACCCTTGCATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACGGACCCCATAAAACAAAGGCTCCCACTCACAGAATTTCTCTCCAGTATGGTCCTTAAAGATTACTaGACTACACACAAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: STDPIKQRLPLTEFLSSMVLKDY*TTHKGF Trigger: AAATCCTTTGTGTGTAGTGCAGTAATCTTTAAGGAC...CATACTGGAGAGAAATTCTGTGAGTGGGAGCCTTTGTTTTATGGGGTCCGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACTCTCACCATTGCTTCCTTAACCAGTAGACCCAGCTATTTCTTCCTCTATGTCCTTAAAGATTACTaGACTACACACAAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: GTLTIASLTSRPSYFFLYVLKDY*TTHKGF Trigger: AAATCCTTTGTGTGTAGTGCAGTAATCTTTAAGGAC...ATAGAGGAAGAAATAGCTGGGTCTACTGGTTAAGGAAGCAATGGTGAGAGTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCCAGCTGAAACTGCTGTaGAGTCATATTCACAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: WLQTSSNPLVTDSFQYQFQLKLL*SHIHSH Trigger: ATGGCTGTGAATATGACTGCACAGCAGTTTCAGCTG...GAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGTTTTTAGCTTGTCTAACTGCAGAATCTCTTCCTCCAATTTACTGAACTCCGAGATGACTGTTTCGTaGAAAGGCTTTACCACATTG | + |
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Preference number: 2 (lower is better) Translates to: RVFSLSNCRISSSNLLNSEMTVS*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACGAAACAGTCATCTC...GGAGTTCAGTAAATTGGAGGAAGAGATTCTGCAGTTAGACAAGCTAAAAACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAACGGACCCCATAAAACAAAGGCTCCCACTCACAGAATTTCTCTCCAGTATAGGATGGCTCTGATATaGAAAGTCTTTATCATATTG | + |
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Preference number: 2 (lower is better) Translates to: LNGPHKTKAPTHRISLQYRMALI*KVFIIL Trigger: CAATATGATAAAGACTTTGCATATCAGAGCCATCCT...ATACTGGAGAGAAATTCTGTGAGTGGGAGCCTTTGTTTTATGGGGTCCGTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | TCAACGGACCCCATAAAACAAAGGCTCCCACTCACAGAATTTCTCTCCAGTATGTGGCACAGATATTTCTaGTTTTGGAACTTAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: STDPIKQRLPLTEFLSSMWHRYF*FWNLKA Trigger: AGCTTTTAAGTTCCAAAACCAGAAATATCTGTGCCA...CATACTGGAGAGAAATTCTGTGAGTGGGAGCCTTTGTTTTATGGGGTCCGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCATTGTGTTTTCTATAGCCATCCCTGCTCTTAGTGACCCAAGCCCCATGTCTTTCATGCCCTGTTaGTTTTCTTTAAAACTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LFIVFSIAIPALSDPSPMSFMPC*FSLKLA Trigger: TGCAAGTTTTAAAGAAAACCAACAGGGCATGAAAGA...CATGGGGCTTGGGTCACTAAGAGCAGGGATGGCTATAGAAAACACAATGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACAATTCAAAAATGCCTGTaGTATGCAACTGTTGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTIQKCL*YATVGN Trigger: GTTTCCAACAGTTGCATATCACAGGCATTTTTGAAT...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCTCTTTTACAGCTTCTTaGAGAGCTCCTTCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: WLQTSSNPLVTDSFQYQFSFTAS*RAPSEA Trigger: AGCTTCTGAAGGAGCTCTTCAAGAAGCTGTAAAAGA...GAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACTGAGTTAGTCTTGTTCAATTCTTTTACAGCTTCTTaGAGAGCTCCTTCAGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: YVIEAVLAGPVTELVLFNSFTAS*RAPSEA Trigger: AGCTTCTGAAGGAGCTCTTCAAGAAGCTGTAAAAGA...ATTGAACAAGACTAACTCAGTTACTGGTCCTGCCAGAACTGCTTCTATTACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACACTTCCTCCAATTTACTaGACTCCTCCAAATATCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTLPPIY*TPPNIY Trigger: ATAGATATTTGGAGGAGTTCAGTAAATTGGAGGAAG...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAGTATGTGGTCTTTTATGTATCTGGAGACTATTGTAACATCCACAGTCTTACTTGGAGACTATTGTaGCATGCAAAGGCTTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: LQYVVFYVSGDYCNIHSLTWRLL*HAKALP Trigger: TGGTAAAGCCTTTGCATGTCACAATAGTCTCCAAGT...AAGACTGTGGATGTTACAATAGTCTCCAGATACATAAAAGACCACATACTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACTTTAGCTTGTCTAACTaGAGAATCTCTTCCTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: NKEQLTICNRSSSGRTSNFSLSN*RISSSN Trigger: ATTGGAGGAAGAGATTCTGCAGTTAGACAAGCTAAA...GTTACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACATCCATTATTTTTCCTaGAAACCCTCACGTCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: NKEQLTICNRSSSGRTSNIHYFS*KPSRHY Trigger: ATAGTGACGTGAGGGTTTGCAGGAAAAATAATGGAT...GTTACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACATCCATTATTTTTCCTaGAAACCCTCACGTCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: GDSLKVLSLSSPQSFIGYIHYFS*KPSRHY Trigger: ATAGTGACGTGAGGGTTTGCAGGAAAAATAATGGAT...GTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACTGAGTTAGTCTTGTTCAATGAGTTTGAGTTTTGTTaGATCTCAACGGACCCCATA | + |
|
Preference number: 2 (lower is better) Translates to: YVIEAVLAGPVTELVLFNEFEFC*ISTDPI Trigger: TATGGGGTCCGTTGAGATCCAACAAAACTCAAACTC...ATTGAACAAGACTAACTCAGTTACTGGTCCTGCCAGAACTGCTTCTATTACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTCGGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTAATGGAGCTATAACTTaGCACAGATATTTCTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VLGDSLKVLSLSSPQSFINGAIT*HRYFWF Trigger: AAACCAGAAATATCTGTGCCAAGTTATAGCTCCATT...AATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCCGAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACGTCCTTAAAGATTACTaGACTACACACAAAGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: GDSLKVLSLSSPQSFIGYVLKDY*TTHKGF Trigger: AAATCCTTTGTGTGTAGTGCAGTAATCTTTAAGGAC...GTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTTAACTCTCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGGTTACAGAATTAGAATaGAAACAGAGAGGTGCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: TFNSQKNLHITDHLGINLVTELE*KQRGAK Trigger: TTTAGCACCTCTCTGTTTGCATTCTAATTCTGTAAC...CAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGAGAGTTAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACAACCTCAGTCTTTTATTaGTTACACACTTCCTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTTSVFY*LHTSLL Trigger: TAACAAGGAAGTGTGTAACCAATAAAAGACTGAGGT...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCATTCAAAAATGCCTGTaGTATGCAACTGTTGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: WLQTSSNPLVTDSFQYQFIQKCL*YATVGN Trigger: GTTTCCAACAGTTGCATATCACAGGCATTTTTGAAT...GAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR TCA 90 bp | CAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCTTTAAGACTTGGAGACTATTGTaGCATGCAAAGGCTTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: QTSSNPLVTDSFQYQFFKTWRLL*HAKALP Trigger: TGGTAAAGCCTTTGCATGTCACAATAGTCTCCAAGT...CTTAAAGAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACACTTCATAGGGTTTCTCTaGAGTATATGGTACTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: RQLEGSFSEFTSVFYWLHFIGFL*SIWYFM Trigger: CATAAAGTACCATATACTGCAGAGAAACCCTATGAA...GTGTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTTTCATAGGGTTTCTCTaGAGTATATGGTACTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: KNKEQLTICNRSSSGRTSFIGFL*SIWYFM Trigger: CATAAAGTACCATATACTGCAGAGAAACCCTATGAA...ACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTAAGTTCTTGTCACTTGCATTACCTGAGTTTGAGTTTTGTTGGATCTCAAGAGACTATTGTGACATaGAAAGGCTTTACCACATTG | + |
|
Preference number: 2 (lower is better) Translates to: TVSSCHLHYLSLSFVGSQETIVT*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCATGTCACAATAGTCTC...TTGAGATCCAACAAAACTCAAACTCAGGTAATGCAAGTGACAAGAACTTACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTAATGGAGCTATAACTTaGCACAGATATTTCTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KNKEQLTICNRSSSGRTSNGAIT*HRYFWF Trigger: AAACCAGAAATATCTGTGCCAAGTTATAGCTCCATT...ACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAATCTCTTCCTCCAATTTACTGAACTCCTCCAAATATCTATTTCTACAGTGTTTCACGAAATCATATTaGCTGTCTCTAACCATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RISSSNLLNSSKYLFLQCFTKSY*LSLTMA Trigger: AGCCATGGTTAGAGACAGTCAATATGATTTCGTGAA...ACACTGTAGAAATAGATATTTGGAGGAGTTCAGTAAATTGGAGGAAGAGATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACTGAGTTAGTCTTGTTCAATGTTACAGAATTAGAATaGAAACAGAGAGGTGCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: YVIEAVLAGPVTELVLFNVTELE*KQRGAK Trigger: TTTAGCACCTCTCTGTTTGCATTCTAATTCTGTAAC...ATTGAACAAGACTAACTCAGTTACTGGTCCTGCCAGAACTGCTTCTATTACATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCGAGACTACTGTGATGTaGAAAGTCTTCAAAATATTG | + |
|
Preference number: 2 (lower is better) Translates to: WLQTSSNPLVTDSFQYQFETTVM*KVFKIL Trigger: CAATATTTTGAAGACTTTGCACATCACAGTAGTCTC...GAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAATCTCTTCCTCCAATTTACTGAACTCCTCCAAATATCTATTTCTACAGTGTATTCAAAAATGCCTGTaGTATGCAACTGTTGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RISSSNLLNSSKYLFLQCIQKCL*YATVGN Trigger: GTTTCCAACAGTTGCATATCACAGGCATTTTTGAAT...ACACTGTAGAAATAGATATTTGGAGGAGTTCAGTAAATTGGAGGAAGAGATTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | AAATATAGTATAGAAAAATGCAATGGCAGACAAGCAGATGAGAGCAATGGCATCTTCATAGGGTTTCTCTaGAGTATATGGTACTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: KYSIEKCNGRQADESNGIFIGFL*SIWYFM Trigger: CATAAAGTACCATATACTGCAGAGAAACCCTATGAA...GATGCCATTGCTCTCATCTGCTTGTCTGCCATTGCATTTTTCTATACTATATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR GCA 90 bp | AGTACAGTAAGTTCTTGTCACTTGCATTACCTGAGTTTGAGTTTTGTTGGATCTAAAATGCCTGTGATATaGAACTGTTGGAAACAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: STVSSCHLHYLSLSFVGSKMPVI*NCWKQV Trigger: TACTTGTTTCCAACAGTTGCATATCACAGGCATTTT...AGATCCAACAAAACTCAAACTCAGGTAATGCAAGTGACAAGAACTTACTGTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTAAGTTCTTGTCACTTGCATTACCTGAGTTTGAGTTTTGTTGGATCTCAATGGCACAGATATTTCTaGTTTTGGAACTTAAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: TVSSCHLHYLSLSFVGSQWHRYF*FWNLKA Trigger: AGCTTTTAAGTTCCAAAACCAGAAATATCTGTGCCA...TTGAGATCCAACAAAACTCAAACTCAGGTAATGCAAGTGACAAGAACTTACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR CCA 72 bp | GTACACCTAATTCAAGTTCCCTGGCCCTGCAGTAGCTaGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VHLIQVPWPCSS*DLPNSRPASIV Trigger: GACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGGGCCAGGGAACTTGAATTAGGTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR GCA 72 bp | TTCTGGTTTTGGAACTTAAAAGCTCTGTACCACTCCTaGTCTGGGTCGGGAAGTGGTTCGGCAGCATGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FWFWNLKALYHS*SGSGSGSAACH Trigger: GTGACATGCTGCCGAACCACTTCCCGACCCAGAGCAGGAGTGGTACAGAGCTTTTAAGTTCCAAAACCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR CCA 72 bp | GTTTTGGAACTTAAAAGCTCTGTACCACTCCTGCTCTaGGTCGGGAAGTGGTTCGGCAGCATGTCACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLELKSSVPLLL*VGKWFGSMSQF Trigger: GAACTGTGACATGCTGCCGAACCACTTCCCGACCCAGAGCAGGAGTGGTACAGAGCTTTTAAGTTCCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGCAGTAGCTGGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTCCATCTTTGCAGGCCAGCTTCTATaGTCCATCTTTGTTCACGAA | + |
|
Preference number: 3 (lower is better) Translates to: PAVAGTFPIAGQLLLSIFAGQLL*SIFVHE Trigger: TTCGTGAACAAAGATGGACAATAGAAGCTGGCCTGC...AAAGATGGACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR GCA 72 bp | TTCGGATTGAAGGTGCTCCCACAGCTGAAACTGCTGTaGAGTCATATTCACAGCCATGTTACACCTGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: FGLKVLPQLKLL*SHIHSHVTPGT Trigger: AGTGCCAGGTGTAACATGGCTGTGAATATGACTGCACAGCAGTTTCAGCTGTGGGAGCACCTTCAATCCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR TCA 72 bp | GTGCAGTCATATTCACAGCCATGTTACACCTGGCACTaGATGCAAGGGTGCTGGCTACAGACCTCATCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VQSYSQPCYTWH*MQGCWLQTSSN Trigger: ATTTGATGAGGTCTGTAGCCAGCACCCTTGCATTCAGTGCCAGGTGTAACATGGCTGTGAATATGACTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| 3UTR-3UTR CAA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACAGTGCTCGGAGACAGCTaGAAGGTTCTTTCTCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTVLGDS*KVLSLS Trigger: ACTCAGAGAAAGAACCTTCAAGCTGTCTCCGAGCAC...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACGTGCTCGGAGACAGCTaGAAGGTTCTTTCTCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NKEQLTICNRSSSGRTSNVLGDS*KVLSLS Trigger: ACTCAGAGAAAGAACCTTCAAGCTGTCTCCGAGCAC...GTTACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATGCAAGGGTGCTGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCGCTATCAGTAGCAGCTaGAGTACAGTAAGTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LNARVLATDLIKSFSHRFAISSS*STVSSC Trigger: ACAAGAACTTACTGTACTCAAGCTGCTACTGATAGC...GAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCAGCACCCTTGCATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACAAATTCTTTCATGCCTTaGGAGAGAACTGTGACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTNSFMP*ERTVTS Trigger: GGACGTCACAGTTCTCTCCAAAGGCATGAAAGAATT...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACGAGTACAGTAAGTTCTaGTCACTTGCATTACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NKEQLTICNRSSSGRTSNEYSKF*SLALPE Trigger: CTCAGGTAATGCAAGTGACAAGAACTTACTGTACTC...GTTACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACTTCTTTTACAGCTTCTaGAAGAGCTCCTTCAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: NKEQLTICNRSSSGRTSNFFYSF*KSSFRS Trigger: GCTTCTGAAGGAGCTCTTCAAGAAGCTGTAAAAGAA...GTTACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACACAATTCTTTCATGCCTTaGGAGAGAACTGTGACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RQLEGSFSEFTSVFYWLHNSFMP*ERTVTS Trigger: GGACGTCACAGTTCTCTCCAAAGGCATGAAAGAATT...GTGTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR GCA 72 bp | GGTCAGGATAATGTTCGTGTTTTTAGCTTGTCTAACTaGAGAATCTCTTCCTCCAATTTACTGAACTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GQDNVRVFSLSN*RISSSNLLNSS Trigger: GGAGGAGTTCAGTAAATTGGAGGAAGAGATTCTGCAGTTAGACAAGCTAAAAACACGAACATTATCCTGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTGTTTTTAGCTTGTCTAACTGCAGAATCTCTTCCTCCAATTTACTGAACTCCGCTATCAGTAGCAGCTaGAGTACAGTAAGTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RVFSLSNCRISSSNLLNSAISSS*STVSSC Trigger: ACAAGAACTTACTGTACTCAAGCTGCTACTGATAGC...GGAGTTCAGTAAATTGGAGGAAGAGATTCTGCAGTTAGACAAGCTAAAAACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTGCTATCAGTAGCAGCTaGAGTACAGTAAGTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KNKEQLTICNRSSSGRTSAISSS*STVSSC Trigger: ACAAGAACTTACTGTACTCAAGCTGCTACTGATAGC...ACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTCGGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTTTCTTTCATGCCCTGTaGGTTTTCTTTAAAACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLGDSLKVLSLSSPQSFIFFHAL*VFFKTC Trigger: GCAAGTTTTAAAGAAAACCAACAGGGCATGAAAGAA...AATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCCGAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACATTGCATTACCTGAGTTaGAGTTTTGTTGGATCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTLHYLS*SFVGSQ Trigger: TTGAGATCCAACAAAACTCAAACTCAGGTAATGCAA...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACAAATAGTAACCTAGTATaGTTCAATACTTGTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTNSNLV*FNTCGV Trigger: GACCCCACAAGTATTGAACAATACTAGGTTACTATT...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACATGTTCTTTTATGTACTaGGAGACTATTGTGACATGC | + |
|
Preference number: 3 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTCSFMY*ETIVTC Trigger: GCATGTCACAATAGTCTCCAAGTACATAAAAGAACA...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGTATGTGGTCTTTTATGTATCTGGAGACTATTGTAACATCCACAGTCTTAATTCTTTCATGCCTTaGAGGATGGCTCTGATATGC | + |
|
Preference number: 3 (lower is better) Translates to: LQYVVFYVSGDYCNIHSLNSFMP*RMALIC Trigger: GCATATCAGAGCCATCCTCAAAGGCATGAAAGAATT...AAGACTGTGGATGTTACAATAGTCTCCAGATACATAAAAGACCACATACTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTTACAGCTTCTTGAAGAGCTCCTTCAGAAGCTCAAATTCTCTTAGAATGGAGTACAGTAAGTTCTaGTCACTTGCATTACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FFYSFLKSSFRSSNSLRMEYSKF*SLALPE Trigger: CTCAGGTAATGCAAGTGACAAGAACTTACTGTACTC...CATTCTAAGAGAATTTGAGCTTCTGAAGGAGCTCTTCAAGAAGCTGTAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCATAGAGGAGACCACTTaGATAAGCAAAAGCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: WLQTSSNPLVTDSFQYQFIEETT*ISKSFT Trigger: GGTAAAGCTTTTGCTTATCAAAGTGGTCTCCTCTAT...GAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTTGTTCTTTTATGTACTaGGAGACTATTGTGACATGC | + |
|
Preference number: 3 (lower is better) Translates to: KNKEQLTICNRSSSGRTSCSFMY*ETIVTC Trigger: GCATGTCACAATAGTCTCCAAGTACATAAAAGAACA...ACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR GCA 72 bp | ATGTGTTCTTCTCTGTATTTGGAGACTACTGTGATGTaGAAAGTCTTCAAAATATTGGACACCTTCATAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MCSSLYLETTVM*KVFKILDTFIG Trigger: CCCTATGAAGGTGTCCAATATTTTGAAGACTTTGCACATCACAGTAGTCTCCAAATACAGAGAAGAACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACTGAGTTAGTCTTGTTCAATTTGCATTACCTGAGTTaGAGTTTTGTTGGATCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YVIEAVLAGPVTELVLFNLHYLS*SFVGSQ Trigger: TTGAGATCCAACAAAACTCAAACTCAGGTAATGCAA...ATTGAACAAGACTAACTCAGTTACTGGTCCTGCCAGAACTGCTTCTATTACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCTTTTCAGTATCAGTTCAATAGTAACCTAGTATaGTTCAATACTTGTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: WLQTSSNPLVTDSFQYQFNSNLV*FNTCGV Trigger: GACCCCACAAGTATTGAACAATACTAGGTTACTATT...GAACTGATACTGAAAAGAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATATAGTATAGAAAAATGCAATGGCAGACAAGCAGATGAGAGCAATGGCATCATAGAGGAGACCACTTaGATAAGCAAAAGCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: KYSIEKCNGRQADESNGIIEETT*ISKSFT Trigger: GGTAAAGCTTTTGCTTATCAAAGTGGTCTCCTCTAT...GATGCCATTGCTCTCATCTGCTTGTCTGCCATTGCATTTTTCTATACTATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR TCA 72 bp | ACAACATGTGTTCTTCTCTGTATTTGGAGACTACTGTaGTGTGCAAAGTCTTCAAAATATTGGACACCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TTCVLLCIWRLL*CAKSSKYWTPS Trigger: TGAAGGTGTCCAATATTTTGAAGACTTTGCACATCACAGTAGTCTCCAAATACAGAGAAGAACACATGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATCTCTTCCTCCAATTTACTGAACTCCTCCAAATATCTATTTCTACAGTGTTTGCATTACCTGAGTTaGAGTTTTGTTGGATCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RISSSNLLNSSKYLFLQCLHYLS*SFVGSQ Trigger: TTGAGATCCAACAAAACTCAAACTCAGGTAATGCAA...ACACTGTAGAAATAGATATTTGGAGGAGTTCAGTAAATTGGAGGAAGAGATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR TCA 72 bp | GCTTGTCTAACTGCAGAATCTCTTCCTCCAATTTACTaGACTCCTCCAAATATCTATTTCTACAGTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ACLTAESLPPIY*TPPNIYFYSVF Trigger: AAAAACACTGTAGAAATAGATATTTGGAGGAGTTCAGTAAATTGGAGGAAGAGATTCTGCAGTTAGACAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR TCA 72 bp | AGCTTCTATTGTCCATCTTTGTTCACGAAATCATATTaGCTGTCTCTAACCATGGCTTCTGTTATTTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SFYCPSLFTKSY*LSLTMASVIYL Trigger: AAGATAAATAACAGAAGCCATGGTTAGAGACAGTCAATATGATTTCGTGAACAAAGATGGACAATAGAAGCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR TCA 72 bp | GCAGTATATGGTACTTTATGTATTCAAAGACGGCCATaGTATGCAAAAGCTTTACCACATTGTTACACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: AVYGTLCIQRRP*YAKALPHCYTN Trigger: ATTAGTGTAACAATGTGGTAAAGCTTTTGCATATCATGGCCGTCTTTGAATACATAAAGTACCATATACTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR GCA 72 bp | TTTCAGTATCAGTTCTTTAAGGTCCTTAAAGATTACTaGACTACACACAAAGGATTTACCACATTGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: FQYQFFKVLKDY*TTHKGFTTLHL Trigger: AAGATGCAATGTGGTAAATCCTTTGTGTGTAGTGCAGTAATCTTTAAGGACCTTAAAGAACTGATACTGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGTAGCTGGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTCCATCTTTCCATGTCGGAACTTCTaGGCTTGCCTGAGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAVAGTFPIAGQLLLSIFPCRNF*ACLRSP Trigger: CGGGGACCTCAGGCAAGCCCAGAAGTTCCGACATGG...AAAGATGGACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR GCA 90 bp | TCAACGGACCCCATAAAACAAAGGCTCCCACTCACAGAATTTCTCTCCAGTATGCGGAACTTCTGGGCTTaGCTGAGGTCCCCGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: STDPIKQRLPLTEFLSSMRNFWA*LRSPHP Trigger: TGGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCG...CATACTGGAGAGAAATTCTGTGAGTGGGAGCCTTTGTTTTATGGGGTCCGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATGCAAGGGTGCTGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCCCATGTCGGAACTTCTaGGCTTGCCTGAGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNARVLATDLIKSFSHRFPCRNF*ACLRSP Trigger: CGGGGACCTCAGGCAAGCCCAGAAGTTCCGACATGG...GAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCAGCACCCTTGCATTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTCGGAACTTCTGGGCTTaGCTGAGGTCCCCGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNKEQLTICNRSSSGRTSRNFWA*LRSPHP Trigger: TGGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCG...ACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGTAGTTACAGAACCATGTCGGAACTTCTaGGCTTGCCTGAGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SEEPPHHRPSGHKLVVTEPCRNF*ACLRSP Trigger: CGGGGACCTCAGGCAAGCCCAGAAGTTCCGACATGG...TTCTGTAACTACAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR CAA 72 bp | GTAGCTGGGACCTTCCCAATAGCAGGCCAGCTTCTATaGTCCATCTTTGTTCACGAAATCATATTGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAGTFPIAGQLL*SIFVHEIILTV Trigger: GACAGTCAATATGATTTCGTGAACAAAGATGGACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR CAA 72 bp | ACTCATTGCTGTTCTGAAGCTGTGCTCGGAGACAGCTaGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: THCCSEAVLGDS*KVLSLSSPQSF Trigger: AAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCCGAGCACAGCTTCAGAACAGCAATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR GCA 90 bp | CTGAATGCAAGGGTGCTGGCTACAGACCTCATCAAATCCTTTAGTCACAGATTCGAGATGACTGTTTCGTaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LNARVLATDLIKSFSHRFEMTVS*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACGAAACAGTCATCTC...GAATCTGTGACTAAAGGATTTGATGAGGTCTGTAGCCAGCACCCTTGCATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
||
| CDS-3UTR TCA 90 bp | CGTGTTTTTAGCTTGTCTAACTGCAGAATCTCTTCCTCCAATTTACTGAACTCCCTTTGGAGAGAACTGTaGCGTCCAAAGGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVFSLSNCRISSSNLLNSLWREL*RPKALP Trigger: TGGTAAAGCCTTTGGACGTCACAGTTCTCTCCAAAG...GGAGTTCAGTAAATTGGAGGAAGAGATTCTGCAGTTAGACAAGCTAAAAACACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
||
| CDS-3UTR GCA 90 bp | TTTTGGAACTTAAAAGCTCTGTACCACTCCTGCTCTGGGTCGGGAAGTGGTTCGAGGATGGCTCTGATATaGAAAGTCTTTATCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: FWNLKALYHSCSGSGSGSRMALI*KVFIIL Trigger: CAATATGATAAAGACTTTGCATATCAGAGCCATCCT...CGAACCACTTCCCGACCCAGAGCAGGAGTGGTACAGAGCTTTTAAGTTCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTTAACTCTCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGACTTGGAGACTATTGTaGCATGCAAAGGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNSQKNLHITDHLGINLTWRLL*HAKALP Trigger: TGGTAAAGCCTTTGCATGTCACAATAGTCTCCAAGT...CAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGAGAGTTAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
||
| CDS-3UTR TCA 90 bp | GTGCTCGGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTATTTGGAGACTACTGTaGTGTGCAAAGTCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGDSLKVLSLSSPQSFIIWRLL*CAKSSK Trigger: TTTTGAAGACTTTGCACATCACAGTAGTCTCCAAAT...AATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCCGAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACATTTGGAGACTACTGTaGTGTGCAAAGTCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GDSLKVLSLSSPQSFIGYIWRLL*CAKSSK Trigger: TTTTGAAGACTTTGCACATCACAGTAGTCTCCAAAT...GTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCAGCTTGAGTACAGTAAGTTCTTGTCACTTGCATTACCTGAGTTTGAGTGAGACTATTGTGACATaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSTVSSCHLHYLSLSETIVT*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCATGTCACAATAGTCTC...ACTCAAACTCAGGTAATGCAAGTGACAAGAACTTACTGTACTCAAGCTGCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
||
| CDS-3UTR GCA 90 bp | CGTGTTTTTAGCTTGTCTAACTGCAGAATCTCTTCCTCCAATTTACTGAACTCCGTATCACTTCTTTCATaGCTTCCGTTTCTTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVFSLSNCRISSSNLLNSVSLLS*LPFLLE Trigger: TTCTAGAAGAAACGGAAGGCATGAAAGAAGTGATAC...GGAGTTCAGTAAATTGGAGGAAGAGATTCTGCAGTTAGACAAGCTAAAAACACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
||
| CDS-3UTR GCA 90 bp | TTATTTTTCCTGCAAACCCTCACGTCACTATGTCACCAGAAAGCACAAAGCACAGAGACTACTGTGATGTaGAAAGTCTTCAAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: LFFLQTLTSLCHQKAQSTETTVM*KVFKIL Trigger: CAATATTTTGAAGACTTTGCACATCACAGTAGTCTC...TGTGCTTTGTGCTTTCTGGTGACATAGTGACGTGAGGGTTTGCAGGAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 |
||
| 3UTR CAA 72 bp | ATCAGTAGCAGCTTGAGTACAGTAAGTTCTTGTCACTaGCATTACCTGAGTTTGAGTTTTGTTGGATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSSLSTVSSCH*HYLSLSFVGSQ Trigger: TTGAGATCCAACAAAACTCAAACTCAGGTAATGCAAGTGACAAGAACTTACTGTACTCAAGCTGCTACTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR CAA 72 bp | GAAGCAGTTCTGGCAGGACCAGTAACTGAGTTAGTCTaGTTCAATAGTAACCTAGTATTGTTCAATACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EAVLAGPVTELV*FNSNLVLFNTC Trigger: ACAAGTATTGAACAATACTAGGTTACTATTGAACAAGACTAACTCAGTTACTGGTCCTGCCAGAACTGCTTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR GCA 90 bp | TATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACTGAGTTAGTCTTGTTCAATGAGACTACTGTGATGTaGAAAGTCTTCAAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: YVIEAVLAGPVTELVLFNETTVM*KVFKIL Trigger: CAATATTTTGAAGACTTTGCACATCACAGTAGTCTC...ATTGAACAAGACTAACTCAGTTACTGGTCCTGCCAGAACTGCTTCTATTACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTAAGTTCTTGTCACTTGCATTACCTGAGTTTGAGTTTTGTTGGATCTCAAAGGATGGCTCTGATATaGAAAGTCTTTATCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSSCHLHYLSLSFVGSQRMALI*KVFIIL Trigger: CAATATGATAAAGACTTTGCATATCAGAGCCATCCT...TTGAGATCCAACAAAACTCAAACTCAGGTAATGCAAGTGACAAGAACTTACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 |
||
| 3UTR CAA 72 bp | CAGCTTCTATTGTCCATCTTTGTTCACGAAATCATATaGACTGTCTCTAACCATGGCTTCTGTTATTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLSIFVHEII*TVSNHGFCYLS Trigger: AGATAAATAACAGAAGCCATGGTTAGAGACAGTCAATATGATTTCGTGAACAAAGATGGACAATAGAAGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| 3UTR CAA 72 bp | ATAGGGTTTTTCTACAACATGTGTTCTTCTCTGTATTaGGAGACTACTGTGATGTGCAAAGTCTTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: IGFFYNMCSSLY*ETTVMCKVFKI Trigger: TATTTTGAAGACTTTGCACATCACAGTAGTCTCCAAATACAGAGAAGAACACATGTTGTAGAAAAACCCTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122859.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGTAGCTGGGACCTTCCCAATAGCAGGCCAGCTTCTATTGTCCATCTTTTCGGAACTTCTGGGCTaGCCTGAGGTCCCCGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PAVAGTFPIAGQLLLSIFSELLG*PEVPAP Trigger: GGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCGA...AAAGATGGACAATAGAAGCTGGCCTGCTATTGGGAAGGTCCCAGCTACTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCATTGTGTTTTCTATAGCCATCCCTGCTCTTAGTGACCCAAGCCCCATGTCGGAACTTCTGGGCTaGCCTGAGGTCCCCGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LFIVFSIAIPALSDPSPMSELLG*PEVPAP Trigger: GGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCGA...CATGGGGCTTGGGTCACTAAGAGCAGGGATGGCTATAGAAAACACAATGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS GCA 90 bp | GCACATCATCATAGGTCACTATATCCATGTCGGAACTTCTGGGCTTaGCTGAGGTCCCCGCACCCAGGAGCGGTACACAGAACACATCAA | + |
|
Preference number: 5 (lower is better) Translates to: AHHHRSLYPCRNFWA*LRSPHPGAVHRTHQ Trigger: TTGATGTGTTCTGTGTACCGCTCCTGGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCGACATGGATATAGTGACCTATGATGATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089207.13 ENSMUST00000094538.6 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS CCA 90 bp | TCACATGCACATCATCATAGGTCACTATATCCATGTCGGAACTTCTaGGCTTGCCTGAGGTCCCCGCACCCAGGAGCGGTACACAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: SHAHHHRSLYPCRNF*ACLRSPHPGAVHRT Trigger: TGTTCTGTGTACCGCTCCTGGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCGACATGGATATAGTGACCTATGATGATGTGCATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089207.13 ENSMUST00000094538.6 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR CAA 90 bp | GGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACTCGGAACTTCTGGGCTaGCCTGAGGTCCCCGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GDSLKVLSLSSPQSFIGYSELLG*PEVPAP Trigger: GGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCGA...GTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 ENSMUST00000122859.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAGAGCAGCTGACTATATGTAATAGAAGCAGTTCTGGCAGGACCAGTAACAATTCTTTCATGCCTTaGGAGAGAACTGTGACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKEQLTICNRSSSGRTSNNSFMP*ERTVTS Trigger: GGACGTCACAGTTCTCTCCAAAGGCATGAAAGAATT...GTTACTGGTCCTGCCAGAACTGCTTCTATTACATATAGTCAGCTGCTCTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
||
| CDS-3UTR CAA 90 bp | GGAGACAGCTTGAAGGTTCTTTCTCTGAGTTCACCTCAGTCTTTTATTGGTTACATAGAGGAGACCACTTaGATAAGCAAAAGCTTTACC | + |
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Preference number: 5 (lower is better) Translates to: GDSLKVLSLSSPQSFIGYIEETT*ISKSFT Trigger: GGTAAAGCTTTTGCTTATCAAAGTGGTCTCCTCTAT...GTAACCAATAAAAGACTGAGGTGAACTCAGAGAAAGAACCTTCAAGCTGTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
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| CDS-3UTR CAA 90 bp | TCAGAAGAACCTCCACATCACAGACCATCTGGGCATAAACTTGTAGTTACAGAATGTTCTTTTATGTACTaGGAGACTATTGTGACATGC | + |
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Preference number: 5 (lower is better) Translates to: SEEPPHHRPSGHKLVVTECSFMY*ETIVTC Trigger: GCATGTCACAATAGTCTCCAAGTACATAAAAGAACA...TTCTGTAACTACAAGTTTATGCCCAGATGGTCTGTGATGTGGAGGTTCTTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089207.13 |
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| CDS TCA 90 bp | GGTTTTTCTACAACATGTGTTCTTCTCTGTATTTGGAGACTACTGTaGTGTGCAAAGTCCAAAATATTGGACACCTTCATAGGGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GFSTTCVLLCIWRLL*CAKSKILDTFIGFL Trigger: GAGAAACCCTATGAAGGTGTCCAATATTTTGGACTTTGCACATCACAGTAGTCTCCAAATACAGAGAAGAACACATGTTGTAGAAAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094538.6 |
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| CDS-3UTR CAA 90 bp | TTCTTTTACAGCTTCTTGAAGAGCTCCTTCAGAAGCTCAAATTCTCTTAGAATGAATTCTTTCATGCCTTaGAGGATGGCTCTGATATGC | + |
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Preference number: 5 (lower is better) Translates to: FFYSFLKSSFRSSNSLRMNSFMP*RMALIC Trigger: GCATATCAGAGCCATCCTCAAAGGCATGAAAGAATT...CATTCTAAGAGAATTTGAGCTTCTGAAGGAGCTCTTCAAGAAGCTGTAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089207.13 ENSMUST00000109931.8 |
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| CDS CCA 72 bp | CATCATCATAGGTCACTATATCCATGTCGGAACTTCTaGGCTTGCCTGAGGTCCCCGCACCCAGGAGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: HHHRSLYPCRNF*ACLRSPHPGAV Trigger: TACCGCTCCTGGGTGCGGGGACCTCAGGCAAGCCCAGAAGTTCCGACATGGATATAGTGACCTATGATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089207.13 ENSMUST00000094538.6 ENSMUST00000109931.8 ENSMUST00000122859.8 |
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| CDS TCA 72 bp | ACAACATGTGTTCTTCTCTGTATTTGGAGACTACTGTaGTGTGCAAAGTCCAAAATATTGGACACCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: TTCVLLCIWRLL*CAKSKILDTFI Trigger: TATGAAGGTGTCCAATATTTTGGACTTTGCACATCACAGTAGTCTCCAAATACAGAGAAGAACACATGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094538.6 |
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