Pregenerated sensors for ZFP119B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062101Ensembl transcript IDs: ENSMUST00000056147.14, ENSMUST00000189452.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAACTACACGTGCAAAGTaGACCAGGACAGACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENETTRAK*TRTDRR Trigger: TCTCCTGTCTGTCCTGGTTCACTTTGCACGTGTAGT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR TCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAACCAGTGTCAGTATTTTaGTGTATTCCCACTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEPVSVF*CIPTEA Trigger: AGCCTCAGTGGGAATACATCAAAATACTGACACTGG...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR TCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAGTTTGGTCATGTCTCTaGAGAGAACAACTCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEVWSCL*REQLRA Trigger: AGCTCTGAGTTGTTCTCTTCAGAGACATGACCAAAC...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAACTGCTTCTTTCCATATaGAGAGGGACAGTTGATACA | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENELLLSI*RGTVDT Trigger: TGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAG...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAAAGAGTACTGAGACATaGAAAGGCTATACCACACTG | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEKSTET*KGYTTL Trigger: CAGTGTGGTATAGCCTTTGCATGTCTCAGTACTCTT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR TCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAAAAGCCCATTCTTCTTaGGAGAAGTTTACATGCACA | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEKAHSS*EKFTCT Trigger: TGTGCATGTAAACTTCTCTCAAGAAGAATGGGCTTT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056147.14 |
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| CDS-3UTR GCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAAAGATAACTATTGCATaGAAAGGCCTTACCACACTG | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEKITIA*KGLTTL Trigger: CAGTGTGGTAAGGCCTTTGCATGCAATAGTTATCTT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAAAGATTACTGTTACATaGAAAGGCTTTCCCACACTG | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEKITVT*KGFPTL Trigger: CAGTGTGGGAAAGCCTTTGCATGTAACAGTAATCTT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAACTTTACCACACTGACTaGATTCATAACATTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENELYHTD*IHNILL Trigger: TAGGAGAATGTTATGAATGCAGTCAGTGTGGTAAAG...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAAAGATACCTCTTACATaGAAAGGTTTTACCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEKIPLT*KGFTTL Trigger: CAGTGTGGTAAAACCTTTGCATGTAAGAGGTATCTT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAAAGACTACTGCTATATaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: GSTNLHQPSLRKLRRENEKTTAI*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCATATAGCAGTAGTCTT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS TCA 90 bp | GAAAGAGATTGGTACACTGCTTCTTTCCATATGCAGAGGGACAGTTaGTACACCTTCCATGTCTTCCAGAACTCTGATGTTGATCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: ERDWYTASFHMQRDS*YTFHVFQNSDVDPQ Trigger: TTGAGGATCAACATCAGAGTTCTGGAAGACATGGAAGGTGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS TCA 90 bp | TTCATAACATTCTCCTATAGAGTGAGTCACACTACACGTGCAAAGTaGACCAGGACAGACAGGAGATTTTCCACTTTCCTTGTCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: FITFSYRVSHTTRAK*TRTDRRFSTFLVHR Trigger: TCTGTGGACAAGGAAAGTGGAAAATCTCCTGTCTGTCCTGGTTCACTTTGCACGTGTAGTGTGACTCACTCTATAGGAGAATGTTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS GCA 90 bp | TCTAATTGTTCTAGGAAAGAGATTGGTACACTGCTTCTTTCCATATaGAGAGGGACAGTTGATACACCTTCCATGTCTTCCAGAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: SNCSRKEIGTLLLSI*RGTVDTPSMSSRTL Trigger: CAGAGTTCTGGAAGACATGGAAGGTGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR CAA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAACAAAGCCCATTCTTCTaGAGAGAAGTTTACATGCAC | + |
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Preference number: 5 (lower is better) Translates to: GSTNLHQPSLRKLRRENEQSPFF*REVYMH Trigger: GTGCATGTAAACTTCTCTCAAGAAGAATGGGCTTTG...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056147.14 |
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| CDS-3UTR CAA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAATCCAGAACTCTGATGTaGATCCTCAATATTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: GSTNLHQPSLRKLRRENESRTLM*ILNIVV Trigger: GACCACAATATTGAGGATCAACATCAGAGTTCTGGA...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS-3UTR CAA 90 bp | GGTTCTACTAATCTTCATCAACCATCACTGAGAAAACTCAGAAGGGAAAATGAAAATTCCTTCATGCTTTaGAAGAGTACTGAGACATGC | + |
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Preference number: 5 (lower is better) Translates to: GSTNLHQPSLRKLRRENENSFML*KSTETC Trigger: GCATGTCTCAGTACTCTTCAAAAGCATGAAGGAATT...TTCATTTTCCCTTCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS TCA 72 bp | TGGTACACTGCTTCTTTCCATATGCAGAGGGACAGTTaGTACACCTTCCATGTCTTCCAGAACTCTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: WYTASFHMQRDS*YTFHVFQNSDV Trigger: AACATCAGAGTTCTGGAAGACATGGAAGGTGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS TCA 72 bp | TTCTCCTATAGAGTGAGTCACACTACACGTGCAAAGTaGACCAGGACAGACAGGAGATTTTCCACTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSYRVSHTTRAK*TRTDRRFSTFL Trigger: AAGGAAAGTGGAAAATCTCCTGTCTGTCCTGGTTCACTTTGCACGTGTAGTGTGACTCACTCTATAGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS CAA 72 bp | TTCCCACTGAGGCTGGAAAACCAAGTACTTGTAAACTaGTATCACATTCACCTCCTCTTTTCACAAAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: FPLRLENQVLVN*YHIHLLFSQRG Trigger: CCCCCTTTGTGAAAAGAGGAGGTGAATGTGATACAAGTTTACAAGTACTTGGTTTTCCAGCCTCAGTGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS CAA 90 bp | AGAGGGACAGTTGATACACCTTCCATGTCTTCCAGAACTCTGATGTaGATCCTCAATATTGTGGTCTTCCCATTTGTAGCCTATACAAGT | + |
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Preference number: 6 (lower is better) Translates to: RGTVDTPSMSSRTLM*ILNIVVFPFVAYTS Trigger: ACTTGTATAGGCTACAAATGGGAAGACCACAATATTGAGGATCAACATCAGAGTTCTGGAAGACATGGAAGGTGTATCAACTGTCCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS CAA 72 bp | TGGCTCACATTTATCACTTCCTTTTCCCATATGAGTTaGGTCATGTCTCTGAAGAGAACAACTCAGAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: WLTFITSFSHMS*VMSLKRTTQSF Trigger: AAAGCTCTGAGTTGTTCTCTTCAGAGACATGACCAAACTCATATGGGAAAAGGAAGTGATAAATGTGAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS CAA 72 bp | ACTACATATCTTCTTCTAATTGTTCTAGGAAAGAGATaGGTACACTGCTTCTTTCCATATGCAGAGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: TTYLLLIVLGKR*VHCFFPYAEGQ Trigger: CTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGAAGAAGATATGTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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| CDS CAA 90 bp | TCTTCTGTATTTGAAGATACCTGGGATGGGTTAAGCTTTTACTACTaGGCTCACATTTATCACTTCCTTTTCCCATATGAGTTTGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SSVFEDTWDGLSFYY*AHIYHFLFPYEFGH Trigger: ATGACCAAACTCATATGGGAAAAGGAAGTGATAAATGTGAGCCAAGTAGTAAAAGCTTAACCCATCCCAGGTATCTTCAAATACAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056147.14 ENSMUST00000189452.2 |
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