Pregenerated sensors for ZFP114 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068962Ensembl transcript IDs: ENSMUST00000086010.7, ENSMUST00000205309.2, ENSMUST00000206547.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTGCCAAGAGACAGAAAATTTTCTTAAACCTTTCTTGTTGGGTTaGAGAGATGGTTCATGGATTAAGAGCACTGGTTGCTCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: CCQETENFLKPFLLG*RDGSWIKSTGCSSR Trigger: TCTGGAAGAGCAACCAGTGCTCTTAATCCATGAACCATCTCTTCAACCCAACAAGAAAGGTTTAAGAAAATTTTCTGTCTCTTGGCAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR GCA 90 bp | ATCATCCTGAATAAGTTCAGGAGTTACTCTATGCAAAACAACTCCTaGATACTGAAAGTCAGCAACTATGGTAGGACATTCAGAAAAATC | + |
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Preference number: 1 (lower is better) Translates to: IILNKFRSYSMQNNS*ILKVSNYGRTFRKI Trigger: GATTTTTCTGAATGTCCTACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCTGAACTTATTCAGGATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR-3UTR CCA 90 bp | CATGGATTAAGAGCACTGGTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCCCATCAGGAGGAGCATaGAGTCCATCTGATGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: HGLRALVALPEDQGSIPSPSGGA*SPSDGR Trigger: TCTGCCATCAGATGGACTCCATGCTCCTCCTGATGG...GCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAACCAGTGCTCTTAATCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACCCCCCTGTTAATCTCTaGATCCTCTGGGTTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: FSHIAATSSLSILINYPYPPVNL*ILWVLG Trigger: CCCCAAAACCCAGAGGATTCAGAGATTAACAGGGGG...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGCCCCCTGTTAATCTCTaGATCCTCTGGGTTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: AFWIFVVNFSHIAATSSLPPVNL*ILWVLG Trigger: CCCCAAAACCCAGAGGATTCAGAGATTAACAGGGGG...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATCAGGAGGAGCATaGAGTCCATCTGATGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VNFSHIAATSSLSILINYPSGGA*SPSDGR Trigger: TCTGCCATCAGATGGACTCCATGCTCCTCCTGATGG...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTTACTCTATGCAAAACAACTCCTGCATACTGAAAGTCAGCAACTATGGTGAATCCTCTGGGTTTTaGGGCAATTTTAACCATCAG | + |
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Preference number: 2 (lower is better) Translates to: RSYSMQNNSCILKVSNYGESSGF*GNFNHQ Trigger: CTGATGGTTAAAATTGCCCCAAAACCCAGAGGATTC...ACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR CAA 90 bp | TCACTTTATATTTTTGTGACTTGTAACCAGCCATTCCCACCATTCTaGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SLYIFVTCNQPFPPF*HQYETEAFQGFVFF Trigger: AAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGTGGGAATGGCTGGTTACAAGTCACAAAAATATAAAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGAATCCTCTGGGTTTTaGGGCAATTTTAACCATCAG | + |
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Preference number: 2 (lower is better) Translates to: AFWIFVVNFSHIAATSSLESSGF*GNFNHQ Trigger: CTGATGGTTAAAATTGCCCCAAAACCCAGAGGATTC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| 3UTR TCA 72 bp | ATTCCCAGCATCCACGTGGAAGCTCACATCTGCCTGTaGCTCCAGTTCAAGGGGATCTTATACCCTTACACA | + |
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Preference number: 3 (lower is better) Translates to: IPSIHVEAHICL*LQFKGILYPYT Trigger: TGTGTAAGGGTATAAGATCCCCTTGAACTGGAGTCACAGGCAGATGTGAGCTTCCACGTGGATGCTGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR TCA 72 bp | GAGGCATATGAGACTTCGAATCACTTTATATTTTTGTaGCTTGTAACCAGCCATTCCCACCATTCTTGCATC | + |
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Preference number: 3 (lower is better) Translates to: EAYETSNHFIFL*LVTSHSHHSCI Trigger: GATGCAAGAATGGTGGGAATGGCTGGTTACAAGTCACAAAAATATAAAGTGATTCGAAGTCTCATATGCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR TCA 72 bp | TCAGGAGTTACTCTATGCAAAACAACTCCTGCATACTaGAAGTCAGCAACTATGGTAGGACATTCAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SGVTLCKTTPAY*KSATMVGHSEK Trigger: TTTTTCTGAATGTCCTACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR TCA 72 bp | CTTGCGCTTAGAAGCCTGGTAGATCAGTATGTGATCTaGTCTGTATTGTATACAATAAAGGGTTTCTATGTC | + |
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Preference number: 3 (lower is better) Translates to: LALRSLVDQYVI*SVLYTIKGFYV Trigger: GACATAGAAACCCTTTATTGTATACAATACAGATCAGATCACATACTGATCTACCAGGCTTCTAAGCGCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR TCA 72 bp | GAGACAGAAAATTTTCTTAAACCTTTCTTGTTGGGTTaGAGAGATGGTTCATGGATTAAGAGCACTGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: ETENFLKPFLLG*RDGSWIKSTGC Trigger: GCAACCAGTGCTCTTAATCCATGAACCATCTCTTCAACCCAACAAGAAAGGTTTAAGAAAATTTTCTGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| 3UTR GCA 72 bp | AATAAGTTCAGGAGTTACTCTATGCAAAACAACTCCTaGATACTGAAAGTCAGCAACTATGGTAGGACATTC | + |
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Preference number: 3 (lower is better) Translates to: NKFRSYSMQNNS*ILKVSNYGRTF Trigger: GAATGTCCTACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCTGAACTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR GCA 90 bp | CTCTTCCAGAGGACCAGGGTTCAATTCCCAGCATCCACGTGGAAGCTCACATCTGAGGCCTGGGGAAGCTaGTCTGCTCCCCAGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LFQRTRVQFPASTWKLTSEAWGS*SAPQWQ Trigger: CTGCCACTGGGGAGCAGAGCAGCTTCCCCAGGCCTC...AGATGTGAGCTTCCACGTGGATGCTGGGAATTGAACCCTGGTCCTCTGGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | CATGGATTAAGAGCACTGGTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCGACTCTCCGGACAGCTaGCATCCTCGGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HGLRALVALPEDQGSIPSDSPDS*HPRRPG Trigger: CCCAGGCCTCCGAGGATGCCAGCTGTCCGGAGAGTC...GCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAACCAGTGCTCTTAATCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR TCA 90 bp | CATGGATTAAGAGCACTGGTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCCGGAAGCCGCCCCAGTaGAAGAAACCTCAGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: HGLRALVALPEDQGSIPSRKPPQ*KKPQSC Trigger: ACAGGACTGAGGTTTCTTTCACTGGGGCGGCTTCCG...GCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAACCAGTGCTCTTAATCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR TCA 90 bp | GTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCATCCACGTGGAAGCTCACGATATGAAGTCCGACTaGAGCCCTTCCCACAGACAC | + |
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Preference number: 4 (lower is better) Translates to: VALPEDQGSIPSIHVEAHDMKSD*SPSHRH Trigger: GTGTCTGTGGGAAGGGCTTCAGTCGGACTTCATATC...GTGAGCTTCCACGTGGATGCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | GTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCATCCACGTGGAAGCTCACGCTGATGACAGCTTCTaGAGCTCCGGCCAGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VALPEDQGSIPSIHVEAHADDSF*SSGQFV Trigger: AACAAACTGGCCGGAGCTCCAGAAGCTGTCATCAGC...GTGAGCTTCCACGTGGATGCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR TCA 90 bp | CTCTTCCAGAGGACCAGGGTTCAATTCCCAGCATCCACGTGGAAGCTCACATCTGTGTCTTTGGAAGTGTaGGGCCTGACTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LFQRTRVQFPASTWKLTSVSLEV*GLTEAL Trigger: AAGGGCTTCAGTCAGGCCTCACACTTCCAAAGACAC...AGATGTGAGCTTCCACGTGGATGCTGGGAATTGAACCCTGGTCCTCTGGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | CATGGATTAAGAGCACTGGTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCGTATGGACCCGCTGGTaGCTTTGGAAGCTTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGLRALVALPEDQGSIPSVWTRW*LWKLEA Trigger: AGCCTCAAGCTTCCAAAGCCACCAGCGGGTCCATAC...GCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAACCAGTGCTCTTAATCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | CATGGATTAAGAGCACTGGTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCCCTGTATGGACCCGCTaGTGGCTTTGGAAGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: HGLRALVALPEDQGSIPSPVWTR*WLWKLE Trigger: CTCAAGCTTCCAAAGCCACCAGCGGGTCCATACAGG...GCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAACCAGTGCTCTTAATCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR TCA 90 bp | GTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCATCCACGTGGAAGCTCACACTCTCTGGTTAGTCTaGAGATGTGCGTTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VALPEDQGSIPSIHVEAHTLWLV*RCAFLL Trigger: CAGCAAGAACGCACATCTTCAGACTAACCAGAGAGT...GTGAGCTTCCACGTGGATGCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR GCA 90 bp | CATGGATTAAGAGCACTGGTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCTGCCACAGTCACCACTaGTGTGGGCTTTGTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HGLRALVALPEDQGSIPSCHSHH*CGLCLF Trigger: AAAGAGACAAAGCCCACAGCAGTGGTGACTGTGGCA...GCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAACCAGTGCTCTTAATCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACGACTCTCCGGACAGCTaGCATCCTCGGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYDSPDS*HPRRPG Trigger: CCCAGGCCTCCGAGGATGCCAGCTGTCCGGAGAGTC...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | CATGGATTAAGAGCACTGGTTGCTCTTCCAGAGGACCAGGGTTCAATTCCCAGCTGCAGTGCGTTGTTATaGTGGGAAATGCAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HGLRALVALPEDQGSIPSCSALL*WEMQLS Trigger: GCTGAGTTGCATTTCCCACCATAACAACGCACTGCA...GCTGGGAATTGAACCCTGGTCCTCTGGAAGAGCAACCAGTGCTCTTAATCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACTGCTCTGCTCCCCAGTaGCAGGGGAAGTGGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYCSAPQ*QGKWHC Trigger: GCAGTGCCACTTCCCCTGCCACTGGGGAGCAGAGCA...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | ACCATTCTTGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTTTTGCATCCTCGGAGGCCTaGGGAAGCTGCTCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TILASVRNGSISGICILFASSEA*GSCSAP Trigger: GGGAGCAGAGCAGCTTCCCCAGGCCTCCGAGGATGC...AAAAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR GCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGAGGCCTGGGGAAGCTaGTCTGCTCCCCAGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLEAWGS*SAPQWQ Trigger: CTGCCACTGGGGAGCAGAGCAGCTTCCCCAGGCCTC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | AGGAGTTACTCTATGCAAAACAACTCCTGCATACTGAAAGTCAGCAACTATGGTATGAGTCGTCTTGCCTaGACTCTGGCCTCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: RSYSMQNNSCILKVSNYGMSRLA*TLASHC Trigger: GCAGTGGGAGGCCAGAGTCCAGGCAAGACGACTCAT...ACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | ACCATTCTTGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTTTTTGCTCTGCTCCCCAGTaGCAGGGGAAGTGGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: TILASVRNGSISGICILFCSAPQ*QGKWHC Trigger: GCAGTGCCACTTCCCCTGCCACTGGGGAGCAGAGCA...AAAAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACGCATCCTCGGAGGCCTaGGGAAGCTGCTCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYASSEA*GSCSAP Trigger: GGGAGCAGAGCAGCTTCCCCAGGCCTCCGAGGATGC...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACCCACAGCTGTCGCAGTaGGAGGGCTTCTTGCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYPQLSQ*EGFLPV Trigger: AACGGGCAAGAAGCCCTCCCACTGCGACAGCTGTGG...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR GCA 90 bp | AGGAGTTACTCTATGCAAAACAACTCCTGCATACTGAAAGTCAGCAACTATGGTGAAGATGAGTCGTCTTaGCTGGACTCTGGCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RSYSMQNNSCILKVSNYGEDESS*LDSGLP Trigger: TGGGAGGCCAGAGTCCAGGCAAGACGACTCATCTTC...ACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGTCTTGCCTGGACTCTaGCCTCCCACTGCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLVLPGL*PPTARR Trigger: CCTCCTGGCAGTGGGAGGCCAGAGTCCAGGCAAGAC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACGTCTTGCCTGGACTCTaGCCTCCCACTGCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYVLPGL*PPTARR Trigger: CCTCCTGGCAGTGGGAGGCCAGAGTCCAGGCAAGAC...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACATGAGTCGTCTTGCCTaGACTCTGGCCTCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYMSRLA*TLASHC Trigger: GCAGTGGGAGGCCAGAGTCCAGGCAAGACGACTCAT...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | AGGAGTTACTCTATGCAAAACAACTCCTGCATACTGAAAGTCAGCAACTATGGTGTGTGCACGCGGCAGTaGATGTTGAGATCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RSYSMQNNSCILKVSNYGVCTRQ*MLRSEV Trigger: CACCTCAGATCTCAACATCCACTGCCGCGTGCACAC...ACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR TCA 90 bp | ACCATTCTTGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTTTTGCCCTGTGCTCTGGGTaGATTCCTTCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TILASVRNGSISGICILFALCSG*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCACCCAGAGCACAGGGC...AAAAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR TCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACGTGTGGACCCTCTGGTaGATACTAAGCCCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYVWTLW*ILSPVL Trigger: GAGCACAGGGCTTAGTATTCACCAGAGGGTCCACAC...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCACAGCTGTCGCAGTaGGAGGGCTTCTTGCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYPQLSQ*EGFLPV Trigger: AACGGGCAAGAAGCCCTCCCACTGCGACAGCTGTGG...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACGTGTGCACGCGGCAGTaGATGTTGAGATCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYVCTRQ*MLRSEV Trigger: CACCTCAGATCTCAACATCCACTGCCGCGTGCACAC...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR TCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGCGGAAGCCGCCCCAGTaGAAGAAACCTCAGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLRKPPQ*KKPQSC Trigger: ACAGGACTGAGGTTTCTTTCACTGGGGCGGCTTCCG...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR TCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGCCCTGTGCTCTGGGTaGATTCCTTCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLALCSG*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCACCCAGAGCACAGGGC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR TCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACGATGCGATCTCTGACTaGAGCCCTTACAGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYDAISD*SPYSRC Trigger: GCATCTGCTGTAAGGGCTTCAGTCAGAGATCGCATC...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACACTCTCTGGTGGGTGTaGAGGTTCGAGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYTLWWV*RFELQL Trigger: CAGCTGCAGCTCGAACCTCCACACCCACCAGAGAGT...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACCTAAGCCCTGTGCTCTaGGTGAATTCCTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYLSPVL*VNSFPH Trigger: GTGTGGGAAGGAATTCACCCAGAGCACAGGGCTTAG...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR TCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACGTGTGGACCCTCTGGTaGATACTAAGCCCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYVWTLW*ILSPVL Trigger: GAGCACAGGGCTTAGTATTCACCAGAGGGTCCACAC...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGAAGATGAGTCGTCTTaGCTGGACTCTGGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLEDESS*LDSGLP Trigger: TGGGAGGCCAGAGTCCAGGCAAGACGACTCATCTTC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | AACAACTCCTGCATACTGAAAGTCAGCAACTATGGTAGGACATTCAGAAAAATCCTCCGGCCAGTTTGTTaGCATCATGGCTTGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NNSCILKVSNYGRTFRKILRPVC*HHGLSL Trigger: AAGTGACAAGCCATGATGCCAACAAACTGGCCGGAG...GATTTTTCTGAATGTCCTACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACGTATGGACCCGCTGGTaGCTTTGGAAGCTTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYVWTRW*LWKLEA Trigger: AGCCTCAAGCTTCCAAAGCCACCAGCGGGTCCATAC...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGCCTGTATGGACCCGCTaGTGGCTTTGGAAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLPVWTR*WLWKLE Trigger: CTCAAGCTTCCAAAGCCACCAGCGGGTCCATACAGG...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR TCA 90 bp | AACAACTCCTGCATACTGAAAGTCAGCAACTATGGTAGGACATTCAGAAAAATCTTCGGACACTGCTTCTaGGGCTTCTGTTTCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NNSCILKVSNYGRTFRKIFGHCF*GFCFLL Trigger: TAGCAAGAAACAGAAGCCTCAGAAGCAGTGTCCGAA...GATTTTTCTGAATGTCCTACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGATATGAAGTCCGACTaGAGCCCTTCCCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLDMKSD*SPSHRH Trigger: GTGTCTGTGGGAAGGGCTTCAGTCGGACTTCATATC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR TCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACGTGTCTTTGGAAGTGTaGGGCCTGACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYVSLEV*GLTEAL Trigger: AAGGGCTTCAGTCAGGCCTCACACTTCCAAAGACAC...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGATGCGATCTCTGACTaGAGCCCTTACAGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLDAISD*SPYSRC Trigger: GCATCTGCTGTAAGGGCTTCAGTCAGAGATCGCATC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGCTGATGACAGCTTCTaGAGCTCCGGCCAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLADDSF*SSGQFV Trigger: AACAAACTGGCCGGAGCTCCAGAAGCTGTCATCAGC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTACTCTATGCAAAACAACTCCTGCATACTGAAAGTCAGCAACTATGGTTCAATAATGCTGGAATaGCTGTTTGTGGGACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSYSMQNNSCILKVSNYGSIMLE*LFVGLS Trigger: GGAGAGTCCCACAAACAGCCATTCCAGCATTATTGA...ACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACAGTGCGTTGTTATGGTaGGAAATGCAACTCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYSALLW*EMQLSV Trigger: CACGCTGAGTTGCATTTCCCACCATAACAACGCACT...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACCAGTCACCACTGCTGTaGGCTTTGTCTCTTTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYQSPLL*ALSLLC Trigger: GCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTG...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGCTAAGCCCTGTGCTCTaGGTGAATTCCTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLLSPVL*VNSFPH Trigger: GTGTGGGAAGGAATTCACCCAGAGCACAGGGCTTAG...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| 3UTR CAA 72 bp | ATTTTTGTGACTTGTAACCAGCCATTCCCACCATTCTaGCATCAGTACGAAACGGAAGCATTTCAGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IFVTCNQPFPPF*HQYETEAFQGF Trigger: AAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGTGGGAATGGCTGGTTACAAGTCACAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR TCA 90 bp | ACCATTCTTGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTTTTGTGACACTGGAAAAATaGCTTTGCCACAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TILASVRNGSISGICILFVTLEK*LCHSHH Trigger: GTGGTGACTGTGGCAAAGTCATTTTTCCAGTGTCAC...AAAAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTGCCACAGTCACCACTaGTGTGGGCTTTGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLCHSHH*CGLCLF Trigger: AAAGAGACAAAGCCCACAGCAGTGGTGACTGTGGCA...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACAAACATGATGCTGGGTaGTGGGTGACACTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYKHDAG*WVTLEK Trigger: TTTTTCCAGTGTCACCCAGCACCCAGCATCATGTTT...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACTCAATAATGCTGGAATaGCTGTTTGTGGGACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYSIMLE*LFVGLS Trigger: GGAGAGTCCCACAAACAGCCATTCCAGCATTATTGA...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | ACCATTCTTGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTTTTAGTGCGTTGTTATGGTaGGAAATGCAACTCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TILASVRNGSISGICILFSALLW*EMQLSV Trigger: CACGCTGAGTTGCATTTCCCACCATAACAACGCACT...AAAAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR CCA 90 bp | AACAACTCCTGCATACTGAAAGTCAGCAACTATGGTAGGACATTCAGAAAAATCGATGAAGTTCGTGATTaGGTCTGTCAGTCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NNSCILKVSNYGRTFRKIDEVRD*VCQSRL Trigger: AAGCCTTGACTGACAGACCCAATCACGAACTTCATC...GATTTTTCTGAATGTCCTACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACGATGAAGTTCGTGATTaGGTCTGTCAGTCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYDEVRD*VCQSRL Trigger: AAGCCTTGACTGACAGACCCAATCACGAACTTCATC...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR TCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACGTGACACTGGAAAAATaGCTTTGCCACAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYVTLEK*LCHSHH Trigger: GTGGTGACTGTGGCAAAGTCATTTTTCCAGTGTCAC...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR TCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACACTCTCTGGTTAGTCTaGAGATGTGCGTTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYTLWLV*RCAFLL Trigger: CAGCAAGAACGCACATCTTCAGACTAACCAGAGAGT...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACGCTTTGTCTCTTTTATaGAGTGCGTTGTTATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSILINYPYALSLL*SALLWW Trigger: CCACCATAACAACGCACTGCATAAAAGAGACAAAGC...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACTGCAGTGCGTTGTTATaGTGGGAAATGCAACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYCSALL*WEMQLS Trigger: GCTGAGTTGCATTTCCCACCATAACAACGCACTGCA...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCAGTCACCACTGCTGTaGGCTTTGTCTCTTTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: VNFSHIAATSSLSILINYQSPLL*ALSLLC Trigger: GCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTG...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS-3UTR TCA 90 bp | ACCATTCTTGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTTTTCCAGACAGAAATTCCTaGTTTTCAATAATGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TILASVRNGSISGICILFPDRNS*FSIMLE Trigger: TTCCAGCATTATTGAAAATCAGGAATTTCTGTCTGG...AAAAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGCCAGACAGAAATTCCTaGTTTTCAATAATGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFWIFVVNFSHIAATSSLPDRNS*FSIMLE Trigger: TTCCAGCATTATTGAAAATCAGGAATTTCTGTCTGG...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| 3UTR CAA 72 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTaGATTAACTACCCATACTATCAAATCTTAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FSHIAATSSLSI*INYPYYQILAQ Trigger: TTGTGCTAAGATTTGATAGTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| 3UTR CAA 72 bp | GTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTaGTCAATCTTGATTAACTACCCATACTATCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VVNFSHIAATSS*SILINYPYYQI Trigger: GATTTGATAGTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
||
| CDS CCA 90 bp | TGGCTGTTTGTGGGACTCTCCGGACAGCTGGCATCCTCGGAGGCCTaGGGAAGCTGCTCTGCTCCCCAGTGGCAGGGGAAGTGGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLFVGLSGQLASSEA*GSCSAPQWQGKWHC Trigger: GCAGTGCCACTTCCCCTGCCACTGGGGAGCAGAGCAGCTTCCCCAGGCCTCCGAGGATGCCAGCTGTCCGGAGAGTCCCACAAACAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
||
| CDS GCA 90 bp | GCTTCTGGAGCTCCGGCCAGTTTGTTGGCATCATGGCTTGTCACTTaGCAGCACGGAAGCCGCCCCAGTGAAAGAAACCTCAGTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASGAPASLLASWLVT*QHGSRPSERNLSPV Trigger: AACAGGACTGAGGTTTCTTTCACTGGGGCGGCTTCCGTGCTGGCAAGTGACAAGCCATGATGCCAACAAACTGGCCGGAGCTCCAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCAGAGGACCAGGGTTCAATTCCCAGCATCCACGTGGAAGCTCACATCTATCATGGCTTGTCACTaGCCAGCACGGAAGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFQRTRVQFPASTWKLTSIMACH*PARKPP Trigger: GGGCGGCTTCCGTGCTGGCAAGTGACAAGCCATGAT...AGATGTGAGCTTCCACGTGGATGCTGGGAATTGAACCCTGGTCCTCTGGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS GCA 90 bp | TTTGCCACAGTCACCACTGCTGTGGGCTTTGTCTCTTTTATGCAGTaGGTTGTTATGGTGGGAAATGCAACTCAGCGTGTCAACACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FATVTTAVGFVSFMQ*VVMVGNATQRVNTR Trigger: CCGGGTGTTGACACGCTGAGTTGCATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTGTGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
||
| CDS CCA 90 bp | TCACCACTGCTGTGGGCTTTGTCTCTTTTATGCAGTGCGTTGTTATaGTGGGAAATGCAACTCAGCGTGTCAACACCCGGAAGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLLWALSLLCSALL*WEMQLSVSTPGSNC Trigger: GCAGTTGCTTCCGGGTGTTGACACGCTGAGTTGCATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCAGAGGACCAGGGTTCAATTCCCAGCATCCACGTGGAAGCTCACATCTTGGATGAACACTTTGTaGAATGGGGGTGTCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LFQRTRVQFPASTWKLTSWMNTL*NGGVLM Trigger: CATGAGGACACCCCCATTCAACAAAGTGTTCATCCA...AGATGTGAGCTTCCACGTGGATGCTGGGAATTGAACCCTGGTCCTCTGGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
||
| CDS TCA 90 bp | TTGGTAGACCCTCCTTTCTATGTAAACATGATGCTGGGTGCTGGGTaGCACTGGAAAAATGACTTTGCCACAGTCACCACTGCTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVDPPFYVNMMLGAG*HWKNDFATVTTAVG Trigger: GCCCACAGCAGTGGTGACTGTGGCAAAGTCATTTTTCCAGTGTCACCCAGCACCCAGCATCATGTTTACATAGAAAGGAGGGTCTACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
||
| CDS GCA 90 bp | GAAGTTCGTGATTGGGTCTGTCAGTCAAGGCTTCTTGGCCCTTGCTaGATTGGTAGACCCTCCTTTCTATGTAAACATGATGCTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EVRDWVCQSRLLGPC*IGRPSFLCKHDAGC Trigger: GCACCCAGCATCATGTTTACATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCCAATCACGAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
||
| CDS GCA 90 bp | GATGAAGTTCGTGATTGGGTCTGTCAGTCAAGGCTTCTTGGCCCTTaGTGCATTGGTAGACCCTCCTTTCTATGTAAACATGATGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DEVRDWVCQSRLLGP*CIGRPSFLCKHDAG Trigger: CCCAGCATCATGTTTACATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCCAATCACGAACTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
||
| CDS GCA 90 bp | ATGACTTTGCCACAGTCACCACTGCTGTGGGCTTTGTCTCTTTTATaGAGTGCGTTGTTATGGTGGGAAATGCAACTCAGCGTGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: MTLPQSPLLWALSLL*SALLWWEMQLSVST Trigger: TGTTGACACGCTGAGTTGCATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTGTGGCAAAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CCA 90 bp | CTGGGTGACACTGGAAAAATGACTTTGCCACAGTCACCACTGCTGTaGGCTTTGTCTCTTTTATGCAGTGCGTTGTTATGGTGGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LGDTGKMTLPQSPLL*ALSLLCSALLWWEM Trigger: CATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTGTGGCAAAGTCATTTTTCCAGTGTCACCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACATCATGGCTTGTCACTaGCCAGCACGGAAGCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: FSHIAATSSLSILINYPYIMACH*PARKPP Trigger: GGGCGGCTTCCGTGCTGGCAAGTGACAAGCCATGAT...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | ACCATTCTTGCATCAGTACGAAACGGAAGCATTTCAGGGATTTGTATTCTTTTTCAGTGGGAGGGCTTCTaGCCCGTTTGCACTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TILASVRNGSISGICILFQWEGF*PVCTLW Trigger: CCAGAGAGTGCAAACGGGCAAGAAGCCCTCCCACTG...AAAAAGAATACAAATCCCTGAAATGCTTCCGTTTCGTACTGATGCAAGAATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CAA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACGCTCCGGCCAGTTTGTaGGCATCATGGCTTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FSHIAATSSLSILINYPYAPASL*ASWLVT Trigger: AGTGACAAGCCATGATGCCAACAAACTGGCCGGAGC...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCAGTGGGAGGGCTTCTaGCCCGTTTGCACTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VNFSHIAATSSLSILINYQWEGF*PVCTLW Trigger: CCAGAGAGTGCAAACGGGCAAGAAGCCCTCCCACTG...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACCCACTGCTGTGGGCTTaGTCTCTTTTATGCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSHIAATSSLSILINYPYPLLWA*SLLCSA Trigger: CGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGG...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | AGGAGTTACTCTATGCAAAACAACTCCTGCATACTGAAAGTCAGCAACTATGGTTTGGCCCTTGCTGCATaGGTAGACCCTCCTTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: RSYSMQNNSCILKVSNYGLALAA*VDPPFY Trigger: ATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAA...ACCATAGTTGCTGACTTTCAGTATGCAGGAGTTGTTTTGCATAGAGTAACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086010.7 |
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| CDS-3UTR CAA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGCTCCGGCCAGTTTGTaGGCATCATGGCTTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: AFWIFVVNFSHIAATSSLAPASL*ASWLVT Trigger: AGTGACAAGCCATGATGCCAACAAACTGGCCGGAGC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACTTGGCCCTTGCTGCATaGGTAGACCCTCCTTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FSHIAATSSLSILINYPYLALAA*VDPPFY Trigger: ATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAA...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACTCCTGGATGAACACTTaGTTGAATGGGGGTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSHIAATSSLSILINYPYSWMNT*LNGGVL Trigger: GAGGACACCCCCATTCAACAAAGTGTTCATCCAGGA...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGGTCAGTCAAGGCTTCTaGGCCCTTGCTGCATTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AFWIFVVNFSHIAATSSLVSQGF*ALAALV Trigger: TACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGAC...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | GTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACGTCAGTCAAGGCTTCTaGGCCCTTGCTGCATTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VNFSHIAATSSLSILINYVSQGF*ALAALV Trigger: TACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGAC...GTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | TTCTCACATATAGCTGCTACGAGCTCTTTGTCAATCTTGATTAACTACCCATACTGGATGAACACTTTGTaGAATGGGGGTGTCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FSHIAATSSLSILINYPYWMNTL*NGGVLM Trigger: CATGAGGACACCCCCATTCAACAAAGTGTTCATCCA...GTATGGGTAGTTAATCAAGATTGACAAAGAGCTCGTAGCAGCTATATGTGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS-3UTR CAA 90 bp | GCTTTTTGGATATTTGTTGTTAATTTCTCACATATAGCTGCTACGAGCTCTTTGTCCTGGATGAACACTTaGTTGAATGGGGGTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AFWIFVVNFSHIAATSSLSWMNT*LNGGVL Trigger: GAGGACACCCCCATTCAACAAAGTGTTCATCCAGGA...CAAAGAGCTCGTAGCAGCTATATGTGAGAAATTAACAACAAATATCCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS CCA 72 bp | GTGGGACTCTCCGGACAGCTGGCATCCTCGGAGGCCTaGGGAAGCTGCTCTGCTCCCCAGTGGCAGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VGLSGQLASSEA*GSCSAPQWQGK Trigger: CTTCCCCTGCCACTGGGGAGCAGAGCAGCTTCCCCAGGCCTCCGAGGATGCCAGCTGTCCGGAGAGTCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 90 bp | CTTGCCAGCACGGAAGCCGCCCCAGTGAAAGAAACCTCAGTCCTGTaGTGTGAAGATGAGTCGTCTTGCCTGGACTCTGGCCTCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LASTEAAPVKETSVL*CEDESSCLDSGLPL Trigger: CAGTGGGAGGCCAGAGTCCAGGCAAGACGACTCATCTTCACACAACAGGACTGAGGTTTCTTTCACTGGGGCGGCTTCCGTGCTGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS GCA 72 bp | GCTCCGGCCAGTTTGTTGGCATCATGGCTTGTCACTTaGCAGCACGGAAGCCGCCCCAGTGAAAGAAACCTC | + |
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Preference number: 6 (lower is better) Translates to: APASLLASWLVT*QHGSRPSERNL Trigger: GAGGTTTCTTTCACTGGGGCGGCTTCCGTGCTGGCAAGTGACAAGCCATGATGCCAACAAACTGGCCGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS GCA 72 bp | GAAACCTCAGTCCTGTTGTGTGAAGATGAGTCGTCTTaGCTGGACTCTGGCCTCCCACTGCCAGGAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ETSVLLCEDESS*LDSGLPLPGGS Trigger: GGAACCTCCTGGCAGTGGGAGGCCAGAGTCCAGGCAAGACGACTCATCTTCACACAACAGGACTGAGGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CCA 72 bp | CCTCAGTCCTGTTGTGTGAAGATGAGTCGTCTTGCCTaGACTCTGGCCTCCCACTGCCAGGAGGTTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQSCCVKMSRLA*TLASHCQEVPE Trigger: TTCAGGAACCTCCTGGCAGTGGGAGGCCAGAGTCCAGGCAAGACGACTCATCTTCACACAACAGGACTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 72 bp | ACGGAAGCCGCCCCAGTGAAAGAAACCTCAGTCCTGTaGTGTGAAGATGAGTCGTCTTGCCTGGACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TEAAPVKETSVL*CEDESSCLDSG Trigger: GCCAGAGTCCAGGCAAGACGACTCATCTTCACACAACAGGACTGAGGTTTCTTTCACTGGGGCGGCTTCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 72 bp | ATGCTGATGACAGCTTCTGGAGCTCCGGCCAGTTTGTaGGCATCATGGCTTGTCACTTGCCAGCACGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: MLMTASGAPASL*ASWLVTCQHGS Trigger: GCTTCCGTGCTGGCAAGTGACAAGCCATGATGCCAACAAACTGGCCGGAGCTCCAGAAGCTGTCATCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 72 bp | CCCACAGCTGTCGCAGTGGGAGGGCTTCTTGCCCGTTaGCACTCTCTGGTTAGTCTGAAGATGTGCGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PTAVAVGGLLAR*HSLVSLKMCVL Trigger: AAGAACGCACATCTTCAGACTAACCAGAGAGTGCAAACGGGCAAGAAGCCCTCCCACTGCGACAGCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086010.7 ENSMUST00000206547.2 |
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| CDS CAA 90 bp | CCACAGTCACCACTGCTGTGGGCTTTGTCTCTTTTATGCAGTGCGTaGTTATGGTGGGAAATGCAACTCAGCGTGTCAACACCCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PQSPLLWALSLLCSA*LWWEMQLSVSTPGS Trigger: GCTTCCGGGTGTTGACACGCTGAGTTGCATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 90 bp | TTCGTGATTGGGTCTGTCAGTCAAGGCTTCTTGGCCCTTGCTGCATaGGTAGACCCTCCTTTCTATGTAAACATGATGCTGGGTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FVIGSVSQGFLALAA*VDPPFYVNMMLGAG Trigger: CCCAGCACCCAGCATCATGTTTACATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCCAATCACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS TCA 72 bp | GGCTCCGTTTTCACCAGCGTCTTCGGACACTGCTTCTaGGGCTTCTGTTTCTTGCTAAGATGTGTCTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: GSVFTSVFGHCF*GFCFLLRCVLP Trigger: GGGTAAGACACATCTTAGCAAGAAACAGAAGCCTCAGAAGCAGTGTCCGAAGACGCTGGTGAAAACGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS TCA 72 bp | AAACATGATGCTGGGTGCTGGGTGACACTGGAAAAATaGCTTTGCCACAGTCACCACTGCTGTGGGCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: KHDAGCWVTLEK*LCHSHHCCGLC Trigger: ACAAAGCCCACAGCAGTGGTGACTGTGGCAAAGTCATTTTTCCAGTGTCACCCAGCACCCAGCATCATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS GCA 72 bp | GTCACCACTGCTGTGGGCTTTGTCTCTTTTATGCAGTaGGTTGTTATGGTGGGAAATGCAACTCAGCGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VTTAVGFVSFMQ*VVMVGNATQRV Trigger: GACACGCTGAGTTGCATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS GCA 72 bp | CCACAGTCACCACTGCTGTGGGCTTTGTCTCTTTTATaGAGTGCGTTGTTATGGTGGGAAATGCAACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PQSPLLWALSLL*SALLWWEMQLS Trigger: GCTGAGTTGCATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 72 bp | GGGTCTGTCAGTCAAGGCTTCTTGGCCCTTGCTGCATaGGTAGACCCTCCTTTCTATGTAAACATGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSVSQGFLALAA*VDPPFYVNMML Trigger: CAGCATCATGTTTACATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 90 bp | CACAGGCTGATGAAGTTCGTGATTGGGTCTGTCAGTCAAGGCTTCTaGGCCCTTGCTGCATTGGTAGACCCTCCTTTCTATGTAAACATG | + |
|
Preference number: 6 (lower is better) Translates to: HRLMKFVIGSVSQGF*ALAALVDPPFYVNM Trigger: CATGTTTACATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCCAATCACGAACTTCATCAGCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS GCA 72 bp | CGTGATTGGGTCTGTCAGTCAAGGCTTCTTGGCCCTTaGTGCATTGGTAGACCCTCCTTTCTATGTAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: RDWVCQSRLLGP*CIGRPSFLCKH Trigger: ATGTTTACATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCCAATCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 72 bp | ATGAAGTTCGTGATTGGGTCTGTCAGTCAAGGCTTCTaGGCCCTTGCTGCATTGGTAGACCCTCCTTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: MKFVIGSVSQGF*ALAALVDPPFY Trigger: ATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCCAATCACGAACTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS CAA 90 bp | GACACTGGAAAAATGACTTTGCCACAGTCACCACTGCTGTGGGCTTaGTCTCTTTTATGCAGTGCGTTGTTATGGTGGGAAATGCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: DTGKMTLPQSPLLWA*SLLCSALLWWEMQL Trigger: GAGTTGCATTTCCCACCATAACAACGCACTGCATAAAAGAGACAAAGCCCACAGCAGTGGTGACTGTGGCAAAGTCATTTTTCCAGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS TCA 72 bp | CCTCCTTTCTATGTAAACATGATGCTGGGTGCTGGGTaGCACTGGAAAAATGACTTTGCCACAGTCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: PPFYVNMMLGAG*HWKNDFATVTT Trigger: AGTGGTGACTGTGGCAAAGTCATTTTTCCAGTGTCACCCAGCACCCAGCATCATGTTTACATAGAAAGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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| CDS GCA 72 bp | GATTGGGTCTGTCAGTCAAGGCTTCTTGGCCCTTGCTaGATTGGTAGACCCTCCTTTCTATGTAAACATGAT | + |
|
Preference number: 6 (lower is better) Translates to: DWVCQSRLLGPC*IGRPSFLCKHD Trigger: ATCATGTTTACATAGAAAGGAGGGTCTACCAATGCAGCAAGGGCCAAGAAGCCTTGACTGACAGACCCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086010.7 ENSMUST00000205309.2 ENSMUST00000206547.2 |
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