Pregenerated sensors for ZFP113 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037007Ensembl transcript IDs: ENSMUST00000049393.15, ENSMUST00000132318.2, ENSMUST00000165640.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCTCTCTCTGTCACAGTACTCCCCAACCCCTGTCCCTGTCCCTaGCTGCTGCCTAGAGATCAAGATAGAAAGCTCTCAGCACTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SSLSVTVLPNPCPCP*LLPRDQDRKLSALF Trigger: GAACAGTGCTGAGAGCTTTCTATCTTGATCTCTAGGCAGCAGCCAGGGACAGGGACAGGGGTTGGGGAGTACTGTGACAGAGAGAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR TCA 90 bp | GATGGCTTAGTGGGTAAGAGCACCCAACTGCTCTTCCAAAGGTCCTaGGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT | + |
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Preference number: 1 (lower is better) Translates to: DGLVGKSTQLLFQRS*VQIPATTWWLTTIR Trigger: ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTTGGGTGCTCTTACCCACTAAGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR CCA 90 bp | TTCTGTTTAGTAGTGCATTTCATTTCTGCTACAGGACGGGCAGGGTaGGGAAATATGGAAGTCATCCGTCGGGTTGGGAGCACTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: FCLVVHFISATGRAG*GNMEVIRRVGSTQG Trigger: TCCCTGAGTGCTCCCAACCCGACGGATGACTTCCATATTTCCCCACCCTGCCCGTCCTGTAGCAGAAATGAAATGCACTACTAAACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTaGCTCCATCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTIRNEI*LHLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGATGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR TCA 90 bp | CACACAAGCACCATCCTCACCTTGGAAAGAAAGGCTCTTCTGGTATaGGGAAATTGGTTTAGTGCAAACCCCTTCCCAAGAGGGGTAACT | + |
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Preference number: 1 (lower is better) Translates to: HTSTILTLERKALLV*GNWFSANPFPRGVT Trigger: AGTTACCCCTCTTGGGAAGGGGTTTGCACTAAACCAATTTCCTCATACCAGAAGAGCCTTTCTTTCCAAGGTGAGGATGGTGCTTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR GCA 90 bp | TTTACTGCTCCTATGGGATTCTCTGTCAGTGATGTCACAAGGGTCTaGCTACAGTACTGCCTGACTGCTCTTGAAAACACAGTACACTGC | + |
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Preference number: 1 (lower is better) Translates to: FTAPMGFSVSDVTRV*LQYCLTALENTVHC Trigger: GCAGTGTACTGTGTTTTCAAGAGCAGTCAGGCAGTACTGTAGGCAGACCCTTGTGACATCACTGACAGAGAATCCCATAGGAGCAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR CCA 90 bp | TTTGTTTTGTATTGTTTGCTAAAAAGAAACAATCCAGCCAGTTGGTaGTGGTATACCCAATCCCAGCACTCAGGAGGCAGAGGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FVLYCLLKRNNPASW*WYTQSQHSGGRGRQ Trigger: CTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTGGGTATACCACCACCAACTGGCTGGATTGTTTCTTTTTAGCAAACAATACAAAACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR TCA 90 bp | ATGGAAGAAGGTGTGGATCAGATGTTGACTGAGAAGCTGAAGGGATaGGAAGGAATCACACAATACACTTGGAATAACTCCCACGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: MEEGVDQMLTEKLKG*EGITQYTWNNSHVC Trigger: GCAAACGTGGGAGTTATTCCAAGTGTATTGTGTGATTCCTTCTCATCCCTTCAGCTTCTCAGTCAACATCTGATCCACACCTTCTTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR TCA 90 bp | AAGTTCACTTTAGGATTCCATTTACGGTCACTGTGCTGTTTTAACTaGCACAAGTGTGGCTCCCATACAAAAGCACTCCCTTGGGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: KFTLGFHLRSLCCFN*HKCGSHTKALPWEK Trigger: TTTTTCCCAAGGGAGTGCTTTTGTATGGGAGCCACACTTGTGTCAGTTAAAACAGCACAGTGACCGTAAATGGAATCCTAAAGTGAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR GCA 90 bp | GACCCTGAATTTGGTATGAAGATGGCTACATACATTTATATAGTCTaGAACAATGTCTACAAGAGATTGAGAGAGTTGTGTGTGACAAGT | + |
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Preference number: 1 (lower is better) Translates to: DPEFGMKMATYIYIV*NNVYKRLRELCVTS Trigger: ACTTGTCACACACAACTCTCTCAATCTCTTGTAGACATTGTTGCAGACTATATAAATGTATGTAGCCATCTTCATACCAAATTCAGGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | CGGGCAGGGTGGGGAAATATGGAAGTCATCCGTCGGGTTGGGAGCACTCAGGGATGCCTCTGTGCTCCCTaGCTGACTCCAGCTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: RAGWGNMEVIRRVGSTQGCLCAP*LTPAVT Trigger: TGTCACAGCTGGAGTCAGTCAGGGAGCACAGAGGCA...TCCCTGAGTGCTCCCAACCCGACGGATGACTTCCATATTTCCCCACCCTGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | CGGGCAGGGTGGGGAAATATGGAAGTCATCCGTCGGGTTGGGAGCACTCAGGGACCTAGGAGAGGCCCCTaGAAAGCTCAAACCTCAACC | + |
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Preference number: 2 (lower is better) Translates to: RAGWGNMEVIRRVGSTQGPRRGP*KAQTST Trigger: GGTTGAGGTTTGAGCTTTGCAGGGGCCTCTCCTAGG...TCCCTGAGTGCTCCCAACCCGACGGATGACTTCCATATTTCCCCACCCTGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | AAGACCTGTCTCTCCTCTCTCTCTGTCACAGTACTCCCCAACCCCTGTCCCTGTTGTGTGACAAGTTTGTaGCACCCCCACCCCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: KTCLSSLSVTVLPNPCPCCVTSL*HPHPLQ Trigger: TTGGAGGGGGTGGGGGTGGCACAAACTTGTCACACA...ACAGGGACAGGGGTTGGGGAGTACTGTGACAGAGAGAGAGGAGAGACAGGTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCAGCACTGTTCCAGTGCTATGCTTGTCTGTTTCCTGCCATGATGGTCATTTCTCTCTGCCTCTGTaGTCCCTGACTGACTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: ALSTVPVLCLSVSCHDGHFSLPL*SLTDSS Trigger: GCTGGAGTCAGTCAGGGAGCACAGAGGCAGAGAGAA...ATGACCATCATGGCAGGAAACAGACAAGCATAGCACTGGAACAGTGCTGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCAGCACTGTTCCAGTGCTATGCTTGTCTGTTTCCTGCCATGATGGTCATGGGATTCTCTGTCAGTaGTGTCACAAGGGTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ALSTVPVLCLSVSCHDGHGILCQ*CHKGLP Trigger: AGGCAGACCCTTGTGACATCACTGACAGAGAATCCC...ATGACCATCATGGCAGGAAACAGACAAGCATAGCACTGGAACAGTGCTGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | AATATTAAAGCTGGATTAGGAAGAGTGCTTTTGAGATGCAGCCCCTGGGAGCCTGCAAGCGGGTCTCTCTaGGTTCAAAGCCAGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: NIKAGLGRVLLRCSPWEPASGSL*VQSQSG Trigger: ACCAGACTGGCTTTGAACTCAGAGAGACCCGCTTGC...AGGCTCCCAGGGGCTGCATCTCAAAAGCACTCTTCCTAATCCAGCTTTAATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | AAGACCTGTCTCTCCTCTCTCTCTGTCACAGTACTCCCCAACCCCTGTCCCTGTGAATACTCTACAAACTaGGCTACATCTCTGGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: KTCLSSLSVTVLPNPCPCEYSTN*ATSLAF Trigger: AAAGGCCAGAGATGTAGCTCAGTTTGTAGAGTATTC...ACAGGGACAGGGGTTGGGGAGTACTGTGACAGAGAGAGAGGAGAGACAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | GGAATGAGAATGGCTGCCATAGGCTCATATACTTGCATGCTTAGTCCCAGAGAAGCTGACTCCAGACTATaGTTCTCTCTGCCTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GMRMAAIGSYTCMLSPREADSRL*FSLPLC Trigger: GCACAGAGGCAGAGAGAATCATAGTCTGGAGTCAGC...TTCTCTGGGACTAAGCATGCAAGTATATGAGCCTATGGCAGCCATTCTCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | GTCAGGCCAGTGTTAAATCTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTATCCCTGTGCCAGGATaGTTTCCCAGTCAGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VRPVLNLPVQIYLRLFTAIPVPG*FPSQPH Trigger: GTGGGGCTGACTGGGAAAGCATCCTGGCACAGGGAT...AGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAGATTTAACACTGGCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCAGCACTGTTCCAGTGCTATGCTTGTCTGTTTCCTGCCATGATGGTCATAAGGCAAGAGCTCTGTaGACGCAGGACATGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ALSTVPVLCLSVSCHDGHKARAL*TQDMKK Trigger: TTTCTTCATGTCCTGCGTCCACAGAGCTCTTGCCTT...ATGACCATCATGGCAGGAAACAGACAAGCATAGCACTGGAACAGTGCTGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | GGAATGAGAATGGCTGCCATAGGCTCATATACTTGCATGCTTAGTCCCAGAGAAACAGGACGGGCAGGGTaGGGAAATATGGAAGTCATC | + |
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Preference number: 2 (lower is better) Translates to: GMRMAAIGSYTCMLSPRETGRAG*GNMEVI Trigger: GATGACTTCCATATTTCCCCACCCTGCCCGTCCTGT...TTCTCTGGGACTAAGCATGCAAGTATATGAGCCTATGGCAGCCATTCTCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGTACCAACAGAGGCCAGAAGAGGACATCAGATCCCCTGCAGCTAGAGAATAAACGGATAACCTaGAGAAGGGGAAAGTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: CAGTNRGQKRTSDPLQLENKRIT*RRGKCV Trigger: TACACACTTTCCCCTTCTCCAGGTTATCCGTTTATT...CTCTAGCTGCAGGGGATCTGATGTCCTCTTCTGGCCTCTGTTGGTACCTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR CAA 90 bp | CAAAGCAAAAATCCCTTATGGATCAGACATATGGCTCAAAGACTCTaGTCCCTGCCAGGCCTGGTGACCTCAGCTTCATTCCTTAAACCC | + |
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Preference number: 2 (lower is better) Translates to: QSKNPLWIRHMAQRL*SLPGLVTSASFLKP Trigger: GGGTTTAAGGAATGAAGCTGAGGTCACCAGGCCTGGCAGGGACAAGAGTCTTTGAGCCATATGTCTGATCCATAAGGGATTTTTGCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | GGAATGAGAATGGCTGCCATAGGCTCATATACTTGCATGCTTAGTCCCAGAGAACAAGCCTTGAACTTGTaGTCTTCCTCTATCAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: GMRMAAIGSYTCMLSPREQALNL*SSSIRR Trigger: GCGCCTGATAGAGGAAGATCACAAGTTCAAGGCTTG...TTCTCTGGGACTAAGCATGCAAGTATATGAGCCTATGGCAGCCATTCTCATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTTCTCGGCACATGCTGACTCCAGACTATGATTCTCTCTGCCTCTGTGCTTCCTTCTCTTCTCAGTaGCTAATTTACTACTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSSRHMLTPDYDSLCLCASFSSQ*LIYYWP Trigger: AGGCCAGTAGTAAATTAGGCACTGAGAAGAGAAGGA...AGCACAGAGGCAGAGAGAATCATAGTCTGGAGTCAGCATGTGCCGAGAAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | AATATTAAAGCTGGATTAGGAAGAGTGCTTTTGAGATGCAGCCCCTGGGAGCCTTTAAGACTCTGTTCCTaGGAAACCCTGCCGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: NIKAGLGRVLLRCSPWEPLRLCS*ETLPIP Trigger: AGGGATCGGCAGGGTTTCCCAGGAACAGAGTCTTAA...AGGCTCCCAGGGGCTGCATCTCAAAAGCACTCTTCCTAATCCAGCTTTAATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGCCAGTGTTAAATCTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTCCCAAGAGGGGTAACTaGTCCCCAAGCTTCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: VRPVLNLPVQIYLRLFTAPKRGN*SPSFLL Trigger: GAGAAGGAAGCTTGGGGACCAGTTACCCCTCTTGGG...AGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAGATTTAACACTGGCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | AATATTAAAGCTGGATTAGGAAGAGTGCTTTTGAGATGCAGCCCCTGGGAGCCTGCACCATCCTCACCTTaGAAAGAAAGGCTCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NIKAGLGRVLLRCSPWEPAPSSP*KERLFW Trigger: CCAGAAGAGCCTTTCTTTCCAAGGTGAGGATGGTGC...AGGCTCCCAGGGGCTGCATCTCAAAAGCACTCTTCCTAATCCAGCTTTAATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCAGCACTGTTCCAGTGCTATGCTTGTCTGTTTCCTGCCATGATGGTCATGAGAAATGTACCCACTaGTACACAAGAGCCAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: ALSTVPVLCLSVSCHDGHEKCTH*YTRAKY Trigger: ATACTTGGCTCTTGTGTATCAGTGGGTACATTTCTC...ATGACCATCATGGCAGGAAACAGACAAGCATAGCACTGGAACAGTGCTGAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | GGAATGAGAATGGCTGCCATAGGCTCATATACTTGCATGCTTAGTCCCAGAGAAAAGCCATGCCCAATTTaGACAGTGCTGGAGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GMRMAAIGSYTCMLSPREKPCPI*TVLELK Trigger: TTTGAGCTCCAGCACTGTGCAAATTGGGCATGGCTT...TTCTCTGGGACTAAGCATGCAAGTATATGAGCCTATGGCAGCCATTCTCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | AAGACCTGTCTCTCCTCTCTCTCTGTCACAGTACTCCCCAACCCCTGTCCCTGTAAAGAAAGGCTCTTCTaGTATGAGGAAATTGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: KTCLSSLSVTVLPNPCPCKERLF*YEEIGL Trigger: TAAACCAATTTCCTCATACCAGAAGAGCCTTTCTTT...ACAGGGACAGGGGTTGGGGAGTACTGTGACAGAGAGAGAGGAGAGACAGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGTACCAACAGAGGCCAGAAGAGGACATCAGATCCCCTGCAGCTAGAGGTTAAGTTCCACATCTaGAGAAGAAATGTCAATTCA | + |
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Preference number: 2 (lower is better) Translates to: CAGTNRGQKRTSDPLQLEVKFHI*RRNVNS Trigger: TGAATTGACATTTCTTCTCCAGATGTGGAACTTAAC...CTCTAGCTGCAGGGGATCTGATGTCCTCTTCTGGCCTCTGTTGGTACCTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | CTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTCCTATGGGATTCTCTGTCAAGAATAGCCAGGGATaGCTAGGGAGAATCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LPVQIYLRLFTAPMGFSVKNSQG*LGRICL Trigger: GAGACAGATTCTCCCTAGGCATCCCTGGCTATTCTT...GACAGAGAATCCCATAGGAGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGCTTGGAAAGACAGAACTAGAAGCTAACTGTAAAACTGACAAGGAGGCAAGTGCATTTCATTTCTaGTACAGGACGGGCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VLLGKTELEANCKTDKEASAFHF*YRTGRV Trigger: CACCCTGCCCGTCCTGTAGCAGAAATGAAATGCACT...TGCCTCCTTGTCAGTTTTACAGTTAGCTTCTAGTTCTGTCTTTCCAAGCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTTCTCGGCACATGCTGACTCCAGACTATGATTCTCTCTGCCTCTGTGCTGAAGAAAATAGTTTATaGCTCTCTCTCATGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LSSRHMLTPDYDSLCLCAEENSL*LSLMWS Trigger: ACTCCACATGAGAGAGAGCCATAAACTATTTTCTTC...AGCACAGAGGCAGAGAGAATCATAGTCTGGAGTCAGCATGTGCCGAGAAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGCCAGTGTTAAATCTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTTTGAGATGCAGCCCCTaGGAGCCTGGAATAGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: VRPVLNLPVQIYLRLFTALRCSP*EPGIVV Trigger: TACAACTATTCCAGGCTCCCAGGGGCTGCATCTCAA...AGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAGATTTAACACTGGCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR CAA 90 bp | GCATATTCCTTGTCCAATATTAAAGCTGGATTAGGAAGAGTGCTTTaGAGATGCAGCCCCTGGGAGCCTGGAATAGTTGTATACGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: AYSLSNIKAGLGRVL*RCSPWEPGIVVYAF Trigger: AAAAGCGTATACAACTATTCCAGGCTCCCAGGGGCTGCATCTCAAAAGCACTCTTCCTAATCCAGCTTTAATATTGGACAAGGAATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR GCA 90 bp | CAATTTAGGAGTCATGAGAATATGGAAGAAGGTGTGGATCAGATGTTGACTGAGAGTTTCAAAAGCCCATaGCAAGACCTGTCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: QFRSHENMEEGVDQMLTESFKSP*QDLSLL Trigger: GAGGAGAGACAGGTCTTGGCATGGGCTTTTGAAACT...CTCAGTCAACATCTGATCCACACCTTCTTCCATATTCTCATGACTCCTAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | CAATTTAGGAGTCATGAGAATATGGAAGAAGGTGTGGATCAGATGTTGACTGAGTACATCTCTGGCCTTTaGGCCTCTTTCTTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QFRSHENMEEGVDQMLTEYISGL*ASFFLP Trigger: AGGAAGGAAGAAAGAGGCCCAAAGGCCAGAGATGTA...CTCAGTCAACATCTGATCCACACCTTCTTCCATATTCTCATGACTCCTAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGCTTGGAAAGACAGAACTAGAAGCTAACTGTAAAACTGACAAGGAGGCACAGCACCAAGTTTCCTaGATTCATGGAATCATGTAC | + |
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Preference number: 2 (lower is better) Translates to: VLLGKTELEANCKTDKEAQHQVS*IHGIMY Trigger: GTACATGATTCCATGAATTCAGGAAACTTGGTGCTG...TGCCTCCTTGTCAGTTTTACAGTTAGCTTCTAGTTCTGTCTTTCCAAGCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | GACACAAGTGTGGCTCCCATACAAAAGCACTCCCTTGGGAAAAACCATTCTGTTTGCCTAATTTACTACTaGCCTCACAATGTTTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: DTSVAPIQKHSLGKNHSVCLIYY*PHNVFK Trigger: CTTAAAAACATTGTGAGGCCAGTAGTAAATTAGGCA...AACAGAATGGTTTTTCCCAAGGGAGTGCTTTTGTATGGGAGCCACACTTGTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGCCAGTGTTAAATCTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTAGTTTCCTGAATTCATaGAATCATGTACCAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VRPVLNLPVQIYLRLFTASFLNS*NHVPKQ Trigger: CTGCTTTGGTACATGATTCCATGAATTCAGGAAACT...AGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAGATTTAACACTGGCCTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR-3UTR CCA 90 bp | CAATTTAGGAGTCATGAGAATATGGAAGAAGGTGTGGATCAGATGTTGACTGAGACAAAAGCACTCCCTTaGGAAAAACCATTCTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: QFRSHENMEEGVDQMLTETKALP*EKPFCL Trigger: TAAACAGAATGGTTTTTCCCAAGGGAGTGCTTTTGT...CTCAGTCAACATCTGATCCACACCTTCTTCCATATTCTCATGACTCCTAAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR CAA 90 bp | AAGTTTCCTGAATTCATGGAATCATGTACCAAAGCAGCATATTCCTaGTCCAATATTAAAGCTGGATTAGGAAGAGTGCTTTTGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: KFPEFMESCTKAAYS*SNIKAGLGRVLLRC Trigger: GCATCTCAAAAGCACTCTTCCTAATCCAGCTTTAATATTGGACAAGGAATATGCTGCTTTGGTACATGATTCCATGAATTCAGGAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR CAA 90 bp | TCCACATCTGGAGAAGAAATGTCAATTCATTGTGTCATACTCAATTaGTACAATAAACGGATAACCTGGAGAAGGGGAAAGTGTGTACTA | + |
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Preference number: 2 (lower is better) Translates to: STSGEEMSIHCVILN*YNKRITWRRGKCVL Trigger: TAGTACACACTTTCCCCTTCTCCAGGTTATCCGTTTATTGTACAAATTGAGTATGACACAATGAATTGACATTTCTTCTCCAGATGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| 3UTR CCA 72 bp | CGGGCAGTGGTGGCGCATGCCTTTAATCCTAGCACTTaGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAVVAHAFNPST*EAEAGGFLSSR Trigger: CCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTAGGATTAAAGGCATGCGCCACCACTGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | GTAGTGCATTTCATTTCTGCTACAGGACGGGCAGGGTaGGGAAATATGGAAGTCATCCGTCGGGTTGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VVHFISATGRAG*GNMEVIRRVGS Trigger: GCTCCCAACCCGACGGATGACTTCCATATTTCCCCACCCTGCCCGTCCTGTAGCAGAAATGAAATGCACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | TCTGTCACAGTACTCCCCAACCCCTGTCCCTGTCCCTaGCTGCTGCCTAGAGATCAAGATAGAAAGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SVTVLPNPCPCP*LLPRDQDRKLS Trigger: TGAGAGCTTTCTATCTTGATCTCTAGGCAGCAGCCAGGGACAGGGACAGGGGTTGGGGAGTACTGTGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR TCA 72 bp | GTGGGTAAGAGCACCCAACTGCTCTTCCAAAGGTCCTaGGTTCAAATCCCAGCAACCACATGGTGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: VGKSTQLLFQRS*VQIPATTWWLT Trigger: TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTTGGGTGCTCTTACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR TCA 72 bp | GAAGAAACACAACCTGTCTGTCTTCTCGGCACATGCTaGCTCCAGACTATGATTCTCTCTGCCTCTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EETQPVCLLGTC*LQTMILSASVL Trigger: GAGCACAGAGGCAGAGAGAATCATAGTCTGGAGTCAGCATGTGCCGAGAAGACAGACAGGTTGTGTTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR TCA 72 bp | ATATGGCTCAAAGACTCTTGTCCCTGCCAGGCCTGGTaGCCTCAGCTTCATTCCTTAAACCCACATAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IWLKDSCPCQAW*PQLHSLNPHSK Trigger: CTTGCTATGTGGGTTTAAGGAATGAAGCTGAGGTCACCAGGCCTGGCAGGGACAAGAGTCTTTGAGCCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR GCA 72 bp | TCTGTCAGTGATGTCACAAGGGTCTGCCTACAGTACTaGCTGACTGCTCTTGAAAACACAGTACACTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVSDVTRVCLQY*LTALENTVHCS Trigger: GGAGCAGTGTACTGTGTTTTCAAGAGCAGTCAGGCAGTACTGTAGGCAGACCCTTGTGACATCACTGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | ACTACTGGCCTCACAATGTTTTTAAGACTCTGTTCCTaGGAAACCCTGCCGATCCCTGTGCCAGGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TTGLTMFLRLCS*ETLPIPVPGCF Trigger: AAAGCATCCTGGCACAGGGATCGGCAGGGTTTCCCAGGAACAGAGTCTTAAAAACATTGTGAGGCCAGTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | TGTTTGCTAAAAAGAAACAATCCAGCCAGTTGGTGGTaGTATACCCAATCCCAGCACTCAGGAGGCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CLLKRNNPASWW*YTQSQHSGGRG Trigger: GCCTCTGCCTCCTGAGTGCTGGGATTGGGTATACCACCACCAACTGGCTGGATTGTTTCTTTTTAGCAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTCAGCACTGTTCCAGTGCTATGCTTGTCTGTTTCCTGCCATGATGGTCATAAACAATCCAGCCAGTaGGTGGTGGTATACCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: ALSTVPVLCLSVSCHDGHKQSSQ*VVVYPI Trigger: GATTGGGTATACCACCACCAACTGGCTGGATTGTTT...ATGACCATCATGGCAGGAAACAGACAAGCATAGCACTGGAACAGTGCTGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR TCA 72 bp | TCAGTGATGTCACAAGGGTCTGCCTACAGTACTGCCTaGCTGCTCTTGAAAACACAGTACACTGCTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVMSQGSAYSTA*LLLKTQYTAPR Trigger: TCTTGGAGCAGTGTACTGTGTTTTCAAGAGCAGTCAGGCAGTACTGTAGGCAGACCCTTGTGACATCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR TCA 72 bp | CAGGTTATTTACTGCTCCTATGGGATTCTCTGTCAGTaGTGTCACAAGGGTCTGCCTACAGTACTGCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QVIYCSYGILCQ*CHKGLPTVLPD Trigger: GTCAGGCAGTACTGTAGGCAGACCCTTGTGACATCACTGACAGAGAATCCCATAGGAGCAGTAAATAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR GCA 72 bp | CCTATGGGATTCTCTGTCAGTGATGTCACAAGGGTCTaGCTACAGTACTGCCTGACTGCTCTTGAAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: PMGFSVSDVTRV*LQYCLTALENT Trigger: TGTGTTTTCAAGAGCAGTCAGGCAGTACTGTAGGCAGACCCTTGTGACATCACTGACAGAGAATCCCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR-3UTR CAA 90 bp | GACACAAGTGTGGCTCCCATACAAAAGCACTCCCTTGGGAAAAACCATTCTGTTAGCACCATCCTCACCTaGGAAAGAAAGGCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DTSVAPIQKHSLGKNHSVSTILT*ERKALL Trigger: CAGAAGAGCCTTTCTTTCCAAGGTGAGGATGGTGCT...AACAGAATGGTTTTTCCCAAGGGAGTGCTTTTGTATGGGAGCCACACTTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAATGAGAATGGCTGCCATAGGCTCATATACTTGCATGCTTAGTCCCAGAGAACACCGGAAATGGGCTTaGAAGTTTCAAAAGCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GMRMAAIGSYTCMLSPREHRKWA*KFQKPM Trigger: CATGGGCTTTTGAAACTTCAAAGCCCATTTCCGGTG...TTCTCTGGGACTAAGCATGCAAGTATATGAGCCTATGGCAGCCATTCTCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | CAGTTCAGATCTACCTCAGGTTATTTACTGCTCCTATaGGATTCTCTGTCAGTGATGTCACAAGGGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QFRSTSGYLLLL*DSLSVMSQGSA Trigger: GGCAGACCCTTGTGACATCACTGACAGAGAATCCCATAGGAGCAGTAAATAACCTGAGGTAGATCTGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR TCA 72 bp | ACCATCCTCACCTTGGAAAGAAAGGCTCTTCTGGTATaGGGAAATTGGTTTAGTGCAAACCCCTTCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TILTLERKALLV*GNWFSANPFPR Trigger: TCTTGGGAAGGGGTTTGCACTAAACCAATTTCCTCATACCAGAAGAGCCTTTCTTTCCAAGGTGAGGATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR TCA 72 bp | CTATTACTGTACACACATGGAGGTTACAGGCCAATCTaGGAGCCAGTTTTCTCTAACATGTGGCTACTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLYTHGGYRPI*EPVFSNMWLLG Trigger: CCCTAGTAGCCACATGTTAGAGAAAACTGGCTCTCAGATTGGCCTGTAACCTCCATGTGTGTACAGTAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132318.2 |
||
| 3UTR CCA 72 bp | TATTGTTTGCTAAAAAGAAACAATCCAGCCAGTTGGTaGTGGTATACCCAATCCCAGCACTCAGGAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YCLLKRNNPASW*WYTQSQHSGGR Trigger: TCTGCCTCCTGAGTGCTGGGATTGGGTATACCACCACCAACTGGCTGGATTGTTTCTTTTTAGCAAACAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | TTGTATTGTTTGCTAAAAAGAAACAATCCAGCCAGTTaGTGGTGGTATACCCAATCCCAGCACTCAGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LYCLLKRNNPAS*WWYTQSQHSGG Trigger: GCCTCCTGAGTGCTGGGATTGGGTATACCACCACCAACTGGCTGGATTGTTTCTTTTTAGCAAACAATACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR GCA 72 bp | AATATTAAAGCTGGATTAGGAAGAGTGCTTTTGAGATaGAGCCCCTGGGAGCCTGGAATAGTTGTATACGCT | + |
|
Preference number: 3 (lower is better) Translates to: NIKAGLGRVLLR*SPWEPGIVVYA Trigger: AGCGTATACAACTATTCCAGGCTCCCAGGGGCTGCATCTCAAAAGCACTCTTCCTAATCCAGCTTTAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR GCA 72 bp | CAGTACTGCCTGACTGCTCTTGAAAACACAGTACACTaGTCCAAGAGCCTAAAGGATAGTCATTACAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QYCLTALENTVH*SKSLKDSHYRN Trigger: GTTTCTGTAATGACTATCCTTTAGGCTCTTGGAGCAGTGTACTGTGTTTTCAAGAGCAGTCAGGCAGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR GCA 72 bp | TTTCTAGGAATTAGAATGACCAACAGGGAAACTGACTaGTTACGAGCTGGTCTTGAACTCAGAGTAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLGIRMTNRETD*LRAGLELRVVQ Trigger: CTGGACTACTCTGAGTTCAAGACCAGCTCGTAAGCAGTCAGTTTCCCTGTTGGTCATTCTAATTCCTAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | GTATTTATTTGGGGAAGGGCTATTACTGTACACACATaGAGGTTACAGGCCAATCTGAGAGCCAGTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VFIWGRAITVHT*RLQANLRASFL Trigger: GAGAAAACTGGCTCTCAGATTGGCCTGTAACCTCCATGTGTGTACAGTAATAGCCCTTCCCCAAATAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132318.2 |
||
| 3UTR TCA 72 bp | AACATTGGGGCTGAGGTATATAATTCTTTCCCAGCATaGGACACTGGGTTTAATCTTCATCAGAGGGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: NIGAEVYNSFPA*DTGFNLHQRGN Trigger: ATTTCCCCTCTGATGAAGATTAAACCCAGTGTCTCATGCTGGGAAAGAATTATATACCTCAGCCCCAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | CGAATACTCTACAAACTGAGCTACATCTCTGGCCTTTaGGCCTCTTTCTTCCTTCCTTTCTTTTCTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RILYKLSYISGL*ASFFLPFFSFL Trigger: AAGAAAAGAAAAGAAAGGAAGGAAGAAAGAGGCCCAAAGGCCAGAGATGTAGCTCAGTTTGTAGAGTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR-3UTR CAA 90 bp | CAATTTAGGAGTCATGAGAATATGGAAGAAGGTGTGGATCAGATGTTGACTGAGAAGAGATTGAGAGAGTaGTGTGTGACAAGTTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QFRSHENMEEGVDQMLTEKRLRE*CVTSLC Trigger: GCACAAACTTGTCACACACAACTCTCTCAATCTCTT...CTCAGTCAACATCTGATCCACACCTTCTTCCATATTCTCATGACTCCTAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR GCA 72 bp | GGAATCACACAATACACTTGGAATAACTCCCACGTTTaGAACCTGCCTGAATGGGTAATTAGTCCTAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: GITQYTWNNSHV*NLPEWVISPNY Trigger: ATAATTAGGACTAATTACCCATTCAGGCAGGTTGCAAACGTGGGAGTTATTCCAAGTGTATTGTGTGATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CCA 72 bp | AAAATAAGCCCATCAGCACCAAGTTTCCTGAATTCATaGAATCATGTACCAAAGCAGCATATTCCTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KISPSAPSFLNS*NHVPKQHIPCP Trigger: TGGACAAGGAATATGCTGCTTTGGTACATGATTCCATGAATTCAGGAAACTTGGTGCTGATGGGCTTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR-3UTR CAA 90 bp | CAATTTAGGAGTCATGAGAATATGGAAGAAGGTGTGGATCAGATGTTGACTGAGAAAGCAGCATATTCCTaGTCCAATATTAAAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QFRSHENMEEGVDQMLTEKAAYS*SNIKAG Trigger: TCCAGCTTTAATATTGGACAAGGAATATGCTGCTTT...CTCAGTCAACATCTGATCCACACCTTCTTCCATATTCTCATGACTCCTAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR TCA 90 bp | GAAACCCTGCCGATCCCTGTGCCAGGATGCTTTCCCAGTCAGCCCCACTTTAAGAAGGTCACCAACTCCTaGGACTTGGCCTTTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETLPIPVPGCFPSQPHFKKVTNS*DLAFRS Trigger: GCTTCTAAAGGCCAAGTCTCAGGAGTTGGTGACCTT...CTTAAAGTGGGGCTGACTGGGAAAGCATCCTGGCACAGGGATCGGCAGGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR TCA 90 bp | GCTCTCAGCACTGTTCCAGTGCTATGCTTGTCTGTTTCCTGCCATGATGGTCATGGAATCGCCATCCAGTaGGAACACGTTCCCATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSTVPVLCLSVSCHDGHGIAIQ*EHVPIV Trigger: AACTATGGGAACGTGTTCTCACTGGATGGCGATTCC...ATGACCATCATGGCAGGAAACAGACAAGCATAGCACTGGAACAGTGCTGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR GCA 90 bp | GGAATGAGAATGGCTGCCATAGGCTCATATACTTGCATGCTTAGTCCCAGAGAACAGAGGTGCCTGAGATaGATGGTCTGCCTGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GMRMAAIGSYTCMLSPREQRCLR*MVCLGF Trigger: GAAACCCAGGCAGACCATGCATCTCAGGCACCTCTG...TTCTCTGGGACTAAGCATGCAAGTATATGAGCCTATGGCAGCCATTCTCATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR GCA 90 bp | AAGGGCTATTACTGTACACACATGGAGGTTACAGGCCAATCTGAGAGCCAGTTTCAGAGGTGCCTGAGATaGATGGTCTGCCTGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGYYCTHMEVTGQSESQFQRCLR*MVCLGF Trigger: GAAACCCAGGCAGACCATGCATCTCAGGCACCTCTG...AAACTGGCTCTCAGATTGGCCTGTAACCTCCATGTGTGTACAGTAATAGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132318.2 |
||
| 3UTR CAA 72 bp | ACAGCTGTAACTCCAGCTCCATGGGATCGAGTGCCCTaGAACAGCTTCCTCGGGCCCATAATTCAAAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TAVTPAPWDRVP*NSFLGPIIQKI Trigger: TATCTTTTGAATTATGGGCCCGAGGAAGCTGTTCAAGGGCACTCGATCCCATGGAGCTGGAGTTACAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGGTACCAACAGAGGCCAGAAGAGGACATCAGATCCCCTGCAGCTAGAGTCAAACTTAAGACCCTaGGAAACATCCTTTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CAGTNRGQKRTSDPLQLESNLRP*ETSFWN Trigger: ATTCCAAAAGGATGTTTCTCAGGGTCTTAAGTTTGA...CTCTAGCTGCAGGGGATCTGATGTCCTCTTCTGGCCTCTGTTGGTACCTGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR GCA 90 bp | GTGTTGCTTGGAAAGACAGAACTAGAAGCTAACTGTAAAACTGACAAGGAGGCAGTAGAGGTCCCTTTGTaGAGGCTCCAGACGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLGKTELEANCKTDKEAVEVPL*RLQTLP Trigger: TGGAAGCGTCTGGAGCCTGCACAAAGGGACCTCTAC...TGCCTCCTTGTCAGTTTTACAGTTAGCTTCTAGTTCTGTCTTTCCAAGCAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR CCA 90 bp | GTGTTGCTTGGAAAGACAGAACTAGAAGCTAACTGTAAAACTGACAAGGAGGCACCAACTCCTGAGACTTaGCCTTTAGAAGCGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLGKTELEANCKTDKEAPTPET*PLEAQQ Trigger: CTGCTGCGCTTCTAAAGGCCAAGTCTCAGGAGTTGG...TGCCTCCTTGTCAGTTTTACAGTTAGCTTCTAGTTCTGTCTTTCCAAGCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR TCA 90 bp | GTCAGGCCAGTGTTAAATCTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTGCTGCCTTTGCAGACTaGCTTCTTGTTCGTAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRPVLNLPVQIYLRLFTAAAFAD*LLVRRL Trigger: AAGCCTACGAACAAGAAGTCAGTCTGCAAAGGCAGC...AGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAGATTTAACACTGGCCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR TCA 90 bp | GTGTTGCTTGGAAAGACAGAACTAGAAGCTAACTGTAAAACTGACAAGGAGGCAATGGCGAACAAGTGCTaGGCTGTACCTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLGKTELEANCKTDKEAMANKC*AVPEGF Trigger: AAAGCCTTCAGGTACAGCTCAGCACTTGTTCGCCAT...TGCCTCCTTGTCAGTTTTACAGTTAGCTTCTAGTTCTGTCTTTCCAAGCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR GCA 90 bp | CTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTCCTATGGGATTCTCTGTCTTCCCTAGCTGCCTTTaGAGACTGACTTCTTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPVQIYLRLFTAPMGFSVFPSCL*RLTSCS Trigger: CGAACAAGAAGTCAGTCTGCAAAGGCAGCTAGGGAA...GACAGAGAATCCCATAGGAGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR GCA 90 bp | CTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTCCTATGGGATTCTCTGTCGAGGAATTCCCTAGCTaGCTTTGCAGACTGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVQIYLRLFTAPMGFSVEEFPS*LCRLTS Trigger: AGAAGTCAGTCTGCAAAGGCAGCTAGGGAATTCCTC...GACAGAGAATCCCATAGGAGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CAA 72 bp | GCTCATATACTTGCATGCTTAGTCCCAGAGAATTCTTaGGGAAGGAGTAGGTGTTGCCTTGTTGGAGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: AHILACLVPENS*GRSRCCLVGGI Trigger: GATACCTCCAACAAGGCAACACCTACTCCTTCCCAAAGAATTCTCTGGGACTAAGCATGCAAGTATATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CAA 72 bp | TTGTCCAATATTAAAGCTGGATTAGGAAGAGTGCTTTaGAGATGCAGCCCCTGGGAGCCTGGAATAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSNIKAGLGRVL*RCSPWEPGIVV Trigger: TACAACTATTCCAGGCTCCCAGGGGCTGCATCTCAAAAGCACTCTTCCTAATCCAGCTTTAATATTGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CAA 72 bp | TTTGTATTGTTTGCTAAAAAGAAACAATCCAGCCAGTaGGTGGTGGTATACCCAATCCCAGCACTCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FVLFAKKKQSSQ*VVVYPIPALRR Trigger: CCTCCTGAGTGCTGGGATTGGGTATACCACCACCAACTGGCTGGATTGTTTCTTTTTAGCAAACAATACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CAA 72 bp | CTGACACAAGTGTGGCTCCCATACAAAAGCACTCCCTaGGGAAAAACCATTCTGTTTAGTAGTGCATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTQVWLPYKSTP*GKTILFSSAFH Trigger: ATGAAATGCACTACTAAACAGAATGGTTTTTCCCAAGGGAGTGCTTTTGTATGGGAGCCACACTTGTGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR TCA 90 bp | CAATTTAGGAGTCATGAGAATATGGAAGAAGGTGTGGATCAGATGTTGACTGAGCAGTATCATCTCACATaGCCCCATACCTTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QFRSHENMEEGVDQMLTEQYHLT*PHTFRD Trigger: ATCTCTGAAGGTATGGGGTCATGTGAGATGATACTG...CTCAGTCAACATCTGATCCACACCTTCTTCCATATTCTCATGACTCCTAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCCAGTGTTAAATCTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTGATCATTTCCAGTTTTaGAATCGCCATCCAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRPVLNLPVQIYLRLFTADHFQF*NRHPVR Trigger: TCTCACTGGATGGCGATTCCAAAACTGGAAATGATC...AGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAGATTTAACACTGGCCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CAA 72 bp | GAATTCATGGAATCATGTACCAAAGCAGCATATTCCTaGTCCAATATTAAAGCTGGATTAGGAAGAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFMESCTKAAYS*SNIKAGLGRVL Trigger: AAGCACTCTTCCTAATCCAGCTTTAATATTGGACAAGGAATATGCTGCTTTGGTACATGATTCCATGAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
||
| 3UTR CAA 72 bp | GGAGAAGAAATGTCAATTCATTGTGTCATACTCAATTaGTACAATAAACGGATAACCTGGAGAAGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEEMSIHCVILN*YNKRITWRRGK Trigger: CTTTCCCCTTCTCCAGGTTATCCGTTTATTGTACAAATTGAGTATGACACAATGAATTGACATTTCTTCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| CDS-3UTR CAA 90 bp | CGGGCAGGGTGGGGAAATATGGAAGTCATCCGTCGGGTTGGGAGCACTCAGGGATCTGTAGAGGTCCCTTaGTGCAGGCTCCAGACGCTT | + |
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Preference number: 5 (lower is better) Translates to: RAGWGNMEVIRRVGSTQGSVEVP*CRLQTL Trigger: AAGCGTCTGGAGCCTGCACAAAGGGACCTCTACAGA...TCCCTGAGTGCTCCCAACCCGACGGATGACTTCCATATTTCCCCACCCTGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| CDS-3UTR CAA 90 bp | TATTTGGGGAAGGGCTATTACTGTACACACATGGAGGTTACAGGCCAATCTGAGTCCCCCAGACTGTCCTaGTCAGGAAAGGAAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: YLGKGYYCTHMEVTGQSESPRLS*SGKEGT Trigger: AGTCCCTTCCTTTCCTGACAAGGACAGTCTGGGGGA...CTCAGATTGGCCTGTAACCTCCATGTGTGTACAGTAATAGCCCTTCCCCAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132318.2 |
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| CDS-3UTR CAA 90 bp | AAGACCTGTCTCTCCTCTCTCTCTGTCACAGTACTCCCCAACCCCTGTCCCTGTTTGCAGACTGACTTCTaGTTCGTAGGCTTCTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: KTCLSSLSVTVLPNPCPCLQTDF*FVGFFK Trigger: TTTGAAGAAGCCTACGAACAAGAAGTCAGTCTGCAA...ACAGGGACAGGGGTTGGGGAGTACTGTGACAGAGAGAGAGGAGAGACAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| CDS-3UTR CAA 90 bp | CTACCAGTTCAGATCTACCTCAGGTTATTTACTGCTCCTATGGGATTCTCTGTCTCCCCCAGACTGTCCTaGTCAGGAAAGGAAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: LPVQIYLRLFTAPMGFSVSPRLS*SGKEGT Trigger: AGTCCCTTCCTTTCCTGACAAGGACAGTCTGGGGGA...GACAGAGAATCCCATAGGAGCAGTAAATAACCTGAGGTAGATCTGAACTGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049393.15 |
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| CDS TCA 90 bp | TTTCTTTCTCCAATATGGGTGAGCTTTTCCTCAACTCTAACTTGGTaGAACTCTTGTATTTTCCTATTCAGTCTTCCAACAGAGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: FLSPIWVSFSSTLTW*NSCIFLFSLPTEEF Trigger: GAATTCCTCTGTTGGAAGACTGAATAGGAAAATACAAGAGTTTCACCAAGTTAGAGTTGAGGAAAAGCTCACCCATATTGGAGAAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049393.15 ENSMUST00000165640.8 |
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| CDS CAA 72 bp | CCCCCAGACTGTCCTTGTCAGGAAAGGAAGGGACTTTaGAAGAAGAAAGAGCGCTCTCTAACAGGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PPDCPCQERKGL*KKKERSLTGAE Trigger: CTCTGCCCCTGTTAGAGAGCGCTCTTTCTTCTTCAAAAGTCCCTTCCTTTCCTGACAAGGACAGTCTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049393.15 ENSMUST00000132318.2 ENSMUST00000165640.8 |
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| CDS CAA 90 bp | ACATCTTGTCCCCCAGACTGTCCTTGTCAGGAAAGGAAGGGACTTTaGAAGAAGAAAGAGCGCTCTCTAACAGGGGCAGAGGTGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TSCPPDCPCQERKGL*KKKERSLTGAEVPE Trigger: CTCAGGCACCTCTGCCCCTGTTAGAGAGCGCTCTTTCTTCTTCAAAAGTCCCTTCCTTTCCTGACAAGGACAGTCTGGGGGACAAGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049393.15 ENSMUST00000132318.2 ENSMUST00000165640.8 |
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| CDS CAA 72 bp | AGCGCAGCAGCCAACATCTTGTCCCCCAGACTGTCCTaGTCAGGAAAGGAAGGGACTTTTGAAGAAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SAAANILSPRLS*SGKEGTFEEER Trigger: TCTTTCTTCTTCAAAAGTCCCTTCCTTTCCTGACAAGGACAGTCTGGGGGACAAGATGTTGGCTGCTGCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049393.15 ENSMUST00000132318.2 ENSMUST00000165640.8 |
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| CDS CCA 72 bp | CCATACCTTCAGAGATTACTCGATCATTTCCAGTTTTaGAATCGCCATCCAGTGAGAACACGTTCCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: PYLQRLLDHFQF*NRHPVRTRSHS Trigger: ACTATGGGAACGTGTTCTCACTGGATGGCGATTCCAAAACTGGAAATGATCGAGTAATCTCTGAAGGTATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049393.15 ENSMUST00000165640.8 |
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| CDS CAA 72 bp | TTCTCCAATATGGGTGAGCTTTTCCTCAACTCTAACTaGGTGAAACTCTTGTATTTTCCTATTCAGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSNMGELFLNSN*VKLLYFPIQSS Trigger: GGAAGACTGAATAGGAAAATACAAGAGTTTCACCAAGTTAGAGTTGAGGAAAAGCTCACCCATATTGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049393.15 ENSMUST00000165640.8 |
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| CDS CAA 90 bp | CTTATTTCTTTCTCCAATATGGGTGAGCTTTTCCTCAACTCTAACTaGGTGAAACTCTTGTATTTTCCTATTCAGTCTTCCAACAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LISFSNMGELFLNSN*VKLLYFPIQSSNRG Trigger: TCCTCTGTTGGAAGACTGAATAGGAAAATACAAGAGTTTCACCAAGTTAGAGTTGAGGAAAAGCTCACCCATATTGGAGAAAGAAATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049393.15 ENSMUST00000165640.8 |
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