Pregenerated sensors for ZFP111 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000087598Ensembl transcript IDs: ENSMUST00000056683.3, ENSMUST00000073833.14, ENSMUST00000086006.12
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGGAGGAAAGGAAGGAGGAAGGAAGGGAGGCAGGCAGGCAGGCTaGCTAGTGGATAGTGACAGACAGATGAATGGACAGAAAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: KGGKEGGRKGGRQAG*LVDSDRQMNGQKGK Trigger: CTTTCCTTTCTGTCCATTCATCTGTCTGTCACTATCCACTAGCCAGCCTGCCTGCCTGCCTCCCTTCCTTCCTCCTTCCTTTCCTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR GCA 90 bp | CTTCATGACCACTTCAGCCATCATCATCTGGAGACGCTCCACCCATaGCAGAGACCGAATCAAAGGAAGATACTGGAGACATGGTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: LHDHFSHHHLETLHP*QRPNQRKILETWSL Trigger: TAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGGTCTCTGGCATGGGTGGAGCGTCTCCAGATGATGATGGCTGAAGTGGTCATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR CCA 90 bp | TCGATACCTGCCACTTCCTTCATGACCACTTCAGCCATCATCATCTaGAGACGCTCCACCCATGCCAGAGACCGAATCAAAGGAAGATAC | + |
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Preference number: 1 (lower is better) Translates to: SIPATSFMTTSAIII*RRSTHARDRIKGRY Trigger: GTATCTTCCTTTGATTCGGTCTCTGGCATGGGTGGAGCGTCTCCAGATGATGATGGCTGAAGTGGTCATGAAGGAAGTGGCAGGTATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR CCA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATaGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GREGKKQNLHCRGIG*TSHVKIQVSGPSGH Trigger: GTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR GCA 90 bp | AGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCATTaGAGGGGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: RIPGLGREGKKQNLH*RGIGWTSHVKIQVS Trigger: ACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR GCA 90 bp | GGAATACGCTTAGGAAGGCACTGGTGGATGACAAAAAGTCATAGGTaGTCAGAAGATACTAGCTTCACCTCCGTCGCTACAGTTTCACTC | + |
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Preference number: 1 (lower is better) Translates to: GIRLGRHWWMTKSHR*SEDTSFTSVATVSL Trigger: GAGTGAAACTGTAGCGACGGAGGTGAAGCTAGTATCTTCTGAGCACCTATGACTTTTTGTCATCCACCAGTGCCTTCCTAAGCGTATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 90 bp | GAGGGAGGGAGGGAGGGAGGGGGAGAGAGAGAGAGACTGACTGACTaGCTCCAGGCAATCTTAACTATTAAAGATCTTAAAGAAAATTTC | + |
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Preference number: 1 (lower is better) Translates to: EGGREGGGERERLTD*LQAILTIKDLKENF Trigger: GAAATTTTCTTTAAGATCTTTAATAGTTAAGATTGCCTGGAGTCAGTCAGTCAGTCTCTCTCTCTCTCCCCCTCCCTCCCTCCCTCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 90 bp | TACAGCAACCCTAAATACCTCATAAGACCAAGTCTTAACCCGCACTaGTGTTCTCCTTCCACTGCCTCAAGAAGAAGGAACAAGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: YSNPKYLIRPSLNPH*CSPSTASRRRNKKE Trigger: TTCTTTCTTGTTCCTTCTTCTTGAGGCAGTGGAAGGAGAACATCAGTGCGGGTTAAGACTTGGTCTTATGAGGTATTTAGGGTTGCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR CCA 90 bp | TTAGAGGAACCTTTGCAATTTAAATTGCTTGGGACTCTTCGTGGTTaGTTTAAAATGGCCAGAGCCTGCCTAACTCAAGAAGAGTTTTTA | + |
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Preference number: 1 (lower is better) Translates to: LEEPLQFKLLGTLRG*FKMARACLTQEEFL Trigger: TAAAAACTCTTCTTGAGTTAGGCAGGCTCTGGCCATTTTAAACCAACCACGAAGAGTCCCAAGCAATTTAAATTGCAAAGGTTCCTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 90 bp | AGACAGACACATAAATTACAAAACAAGATCACAATTACTCATCCCTaGAGTGGGTTTGGCTTAATGCCGCTTGTGTTAATTTTGGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RQTHKLQNKITITHP*SGFGLMPLVLILVS Trigger: GGAGACCAAAATTAACACAAGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTTTGTAATTTATGTGTCTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | GCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCTCAGCCATCATCATCTaGAGACGCTCCACCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: AGLLGSQGLEGRVRSRISSAIII*RRSTHA Trigger: GGCATGGGTGGAGCGTCTCCAGATGATGATGGCTGA...GGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCACTGCCTCAAGAAGAAGGAACAAGAAAGAACAGCCAGGGCTGGCCTCCGAGAGAGAGACTGACTaGCTGACTCCAGGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: PSTASRRRNKKEQPGLASERETD*LTPGNL Trigger: AAGATTGCCTGGAGTCAGTCAGTCAGTCTCTCTCTC...GGAGGCCAGCCCTGGCTGTTCTTTCTTGTTCCTTCTTCTTGAGGCAGTGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR-3UTR TCA 90 bp | GCCCTAGTGGCCACTTCCCTGACTGGGTCCGGGGTATCAGAGATGAGCTATAGATGCATCTTTCATTTATaGATCCAGAGAGCTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: ALVATSLTGSGVSEMSYRCIFHL*IQRALG Trigger: CCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCA...TCTATAGCTCATCTCTGATACCCCGGACCCAGTCAGGGAAGTGGCCACTAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCACTGCCTCAAGAAGAAGGAACAAGAAAGAACAGCCAGGGCTGGCCTCCCCTGCTAGCTCCTCTTaGGAGTTAATCCCTGATAAA | + |
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Preference number: 2 (lower is better) Translates to: PSTASRRRNKKEQPGLASPASSS*ELIPDK Trigger: TTTATCAGGGATTAACTCCCAAGAGGAGCTAGCAGG...GGAGGCCAGCCCTGGCTGTTCTTTCTTGTTCCTTCTTCTTGAGGCAGTGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR-3UTR TCA 90 bp | CAGACAAAGGCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCTGCATCTTTCATTTATaGATCCAGAGAGCTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QTKAGLLGSQGLEGRVRSCIFHL*IQRALG Trigger: CCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCA...GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGCCTTTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCACTGCCTCAAGAAGAAGGAACAAGAAAGAACAGCCAGGGCTGGCCTCCGCACCAAGTCAGGCATaGACTTTTGAAACCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PSTASRRRNKKEQPGLASAPSQA*TFETFQ Trigger: TTGAAAGGTTTCAAAAGTTCATGCCTGACTTGGTGC...GGAGGCCAGCCCTGGCTGTTCTTTCTTGTTCCTTCTTCTTGAGGCAGTGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | CAGACAAAGGCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCTTAACTCTGGAATATTaGAGGGTAGTGTTTGCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: QTKAGLLGSQGLEGRVRSLTLEY*RVVFAS Trigger: GCTAGCAAACACTACCCTCCAATATTCCAGAGTTAA...GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGCCTTTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACAAGATCACAATTACTCATCCCTGAAGTGGGTTTGGCTTAATGCCGCTTCAGCCATCATCATCTaGAGACGCTCCACCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: TKQDHNYSSLKWVWLNAASAIII*RRSTHA Trigger: GGCATGGGTGGAGCGTCTCCAGATGATGATGGCTGA...AGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | TTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGCACATAAGACACTGAGGGAGAATCCAGAGAGCTCTTaGGCAGGTGTGCATGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: FWSPKLLTGVSAHKTLRENPESS*AGVHVQ Trigger: TTGCACATGCACACCTGCCCAAGAGCTCTCTGGATT...CTCCCTCAGTGTCTTATGTGCAGACACTCCTGTAAGCAGTTTTGGAGACCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR GCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGGCTCTTGGGCAGGTGTaGATGTGCAACCTGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LNAACVNFGLQNCLQECLALGQV*MCNLLE Trigger: TTCCAACAGGTTGCACATGCACACCTGCCCAAGAGC...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACAAGATCACAATTACTCATCCCTGAAGTGGGTTTGGCTTAATGCCGCTGCTCTTGGGCAGGTGTaGATGTGCAACCTGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TKQDHNYSSLKWVWLNAAALGQV*MCNLLE Trigger: TTCCAACAGGTTGCACATGCACACCTGCCCAAGAGC...AGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATGGACTAGCTATCAGAATGCTATCTaGCTATGTAATTCGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: GREGKKQNLHCRGIGWTSYQNAI*LCNSPC Trigger: ACATGGCGAATTACATAGTCAGATAGCATTCTGATA...GCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR GCA 90 bp | AATTTAAATTGCTTGGGACTCTTCGTGGTTGGTTTAAAATGGCCAGAGCCTGCCGACACTGAGGGAGTTTaGCCTCAGTTGGTTCTGATT | + |
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Preference number: 2 (lower is better) Translates to: NLNCLGLFVVGLKWPEPADTEGV*PQLVLI Trigger: AATCAGAACCAACTGAGGGCAAACTCCCTCAGTGTC...GGCAGGCTCTGGCCATTTTAAACCAACCACGAAGAGTCCCAAGCAATTTAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | TGCAGGGGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTAAGATACTGGAGACATaGTCCCTAATTGCATCTGAT | + |
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Preference number: 2 (lower is better) Translates to: CRGIGWTSHVKIQVSGPSKILET*SLIASD Trigger: ATCAGATGCAATTAGGGACCATGTCTCCAGTATCTT...ACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR CAA 90 bp | TTACAGATGGTATTAATCATACTCTTAAAGAAACAGGCATTAAGGTaGGCACTAGCCAGCCGACTGCCTTTCTTCACTTTGTACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LQMVLIILLKKQALR*ALASRLPFFTLYSQ Trigger: CTGACTGTACAAAGTGAAGAAAGGCAGTCGGCTGGCTAGTGCCAACCTTAATGCCTGTTTCTTTAAGAGTATGATTAATACCATCTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGAAGATACTGGAGACATaGTCCCTAATTGCATCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LNAACVNFGLQNCLQECLKILET*SLIASD Trigger: ATCAGATGCAATTAGGGACCATGTCTCCAGTATCTT...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR GCA 90 bp | AATTTAAATTGCTTGGGACTCTTCGTGGTTGGTTTAAAATGGCCAGAGCCTGCCATTCTAGACCCAATTTaGAGAATTACAAGTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: NLNCLGLFVVGLKWPEPAILDPI*RITSLA Trigger: AGCAAGACTTGTAATTCTGCAAATTGGGTCTAGAAT...GGCAGGCTCTGGCCATTTTAAACCAACCACGAAGAGTCCCAAGCAATTTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR CAA 90 bp | GCAGAATTACAAGTCTTGCTTCAATTTAGAAATTGCCTTTCTCTATaGGACACGTTCAAGTTCATTCTCTGCTTCATGGTCCTATGCATG | + |
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Preference number: 2 (lower is better) Translates to: AELQVLLQFRNCLSL*DTFKFILCFMVLCM Trigger: CATGCATAGGACCATGAAGCAGAGAATGAACTTGAACGTGTCCAATAGAGAAAGGCAATTTCTAAATTGAAGCAAGACTTGTAATTCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGACATGCTATTATGAAATGAGCTCATCAGACCTTAAAAGACAGACACATTTAACTCTGGAATATTaGAGGGTAGTGTTTGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: TGTCYYEMSSSDLKRQTHLTLEY*RVVFAS Trigger: GCTAGCAAACACTACCCTCCAATATTCCAGAGTTAA...ATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGACATGCTATTATGAAATGAGCTCATCAGACCTTAAAAGACAGACACATTATCAGAATGCTATCTaGCTATGTAATTCGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: TGTCYYEMSSSDLKRQTHYQNAI*LCNSPC Trigger: ACATGGCGAATTACATAGTCAGATAGCATTCTGATA...ATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR CAA 90 bp | GCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCGAATCCAGAGAGCTCTaGGGCAGGTGTGCATGTGCA | + |
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Preference number: 3 (lower is better) Translates to: AGLLGSQGLEGRVRSRISESREL*GRCACA Trigger: TGCACATGCACACCTGCCCAAGAGCTCTCTGGATTC...GGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR CCA 72 bp | AAGGAAGGAGGAAGGAAGGGAGGCAGGCAGGCAGGCTaGCTAGTGGATAGTGACAGACAGATGAATGGACAG | + |
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Preference number: 3 (lower is better) Translates to: KEGGRKGGRQAG*LVDSDRQMNGQ Trigger: CTGTCCATTCATCTGTCTGTCACTATCCACTAGCCAGCCTGCCTGCCTGCCTCCCTTCCTTCCTCCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR CCA 72 bp | GCCACTTCCTTCATGACCACTTCAGCCATCATCATCTaGAGACGCTCCACCCATGCCAGAGACCGAATCAAA | + |
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Preference number: 3 (lower is better) Translates to: ATSFMTTSAIII*RRSTHARDRIK Trigger: TTTGATTCGGTCTCTGGCATGGGTGGAGCGTCTCCAGATGATGATGGCTGAAGTGGTCATGAAGGAAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR GCA 72 bp | CACTTCAGCCATCATCATCTGGAGACGCTCCACCCATaGCAGAGACCGAATCAAAGGAAGATACTGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: HFSHHHLETLHP*QRPNQRKILET Trigger: TGTCTCCAGTATCTTCCTTTGATTCGGTCTCTGGCATGGGTGGAGCGTCTCCAGATGATGATGGCTGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR CAA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGTTAGGATCCCAGGGCTaGGAAGGGAGGGTAAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LNAACVNFGLQNCLQECLLGSQG*EGRVRS Trigger: GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAA...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR GCA 72 bp | GGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCATTaGAGGGGTATAGGATGGACTAGCCATGTAAAAATT | + |
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Preference number: 3 (lower is better) Translates to: GLGREGKKQNLH*RGIGWTSHVKI Trigger: AATTTTTACATGGCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR GCA 72 bp | TTAGGAAGGCACTGGTGGATGACAAAAAGTCATAGGTaGTCAGAAGATACTAGCTTCACCTCCGTCGCTACA | + |
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Preference number: 3 (lower is better) Translates to: LGRHWWMTKSHR*SEDTSFTSVAT Trigger: TGTAGCGACGGAGGTGAAGCTAGTATCTTCTGAGCACCTATGACTTTTTGTCATCCACCAGTGCCTTCCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 72 bp | AGGGAGGGAGGGGGAGAGAGAGAGAGACTGACTGACTaGCTCCAGGCAATCTTAACTATTAAAGATCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: REGGGERERLTD*LQAILTIKDLK Trigger: TTTAAGATCTTTAATAGTTAAGATTGCCTGGAGTCAGTCAGTCAGTCTCTCTCTCTCTCCCCCTCCCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 72 bp | CCTAAATACCTCATAAGACCAAGTCTTAACCCGCACTaGTGTTCTCCTTCCACTGCCTCAAGAAGAAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: PKYLIRPSLNPH*CSPSTASRRRN Trigger: GTTCCTTCTTCTTGAGGCAGTGGAAGGAGAACATCAGTGCGGGTTAAGACTTGGTCTTATGAGGTATTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR GCA 72 bp | GGGACTCTTCGTGGTTGGTTTAAAATGGCCAGAGCCTaGCTAACTCAAGAAGAGTTTTTACTGTGGATGGAT | + |
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Preference number: 3 (lower is better) Translates to: GTLRGWFKMARA*LTQEEFLLWMD Trigger: ATCCATCCACAGTAAAAACTCTTCTTGAGTTAGGCAGGCTCTGGCCATTTTAAACCAACCACGAAGAGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR CCA 72 bp | GGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATaGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: GKKQNLHCRGIG*TSHVKIQVSGP Trigger: AGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| 3UTR-3UTR CAA 90 bp | TTTAGAAATTGCCTTTCTCTATTGGACACGTTCAAGTTCATTCTCTGCTTCATGGAATCCAGAGAGCTCTaGGGCAGGTGTGCATGTGCA | + |
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Preference number: 3 (lower is better) Translates to: FRNCLSLLDTFKFILCFMESREL*GRCACA Trigger: TGCACATGCACACCTGCCCAAGAGCTCTCTGGATTC...CATGAAGCAGAGAATGAACTTGAACGTGTCCAATAGAGAAAGGCAATTTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 72 bp | TTAGCAAAATCTTACAGCACTCAGTTAAACTGCTCCTaGATTCCTGCTAGCTCCTCTTGGGAGTTAATCCCT | + |
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Preference number: 3 (lower is better) Translates to: LAKSYSTQLNCS*IPASSSWELIP Trigger: AGGGATTAACTCCCAAGAGGAGCTAGCAGGAATTCAGGAGCAGTTTAACTGAGTGCTGTAAGATTTTGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR CCA 72 bp | CCTTTGCAATTTAAATTGCTTGGGACTCTTCGTGGTTaGTTTAAAATGGCCAGAGCCTGCCTAACTCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: PLQFKLLGTLRG*FKMARACLTQE Trigger: TTCTTGAGTTAGGCAGGCTCTGGCCATTTTAAACCAACCACGAAGAGTCCCAAGCAATTTAAATTGCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 72 bp | CAACAGAGATTCCATCAACTACTGGAAGCACTGAATTaGATCAGGATGGGGCAAAGTAAAATCTACAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: QQRFHQLLEALN*IRMGQSKIYRE Trigger: CTCTCTGTAGATTTTACTTTGCCCCATCCTGATTCAATTCAGTGCTTCCAGTAGTTGATGGAATCTCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR TCA 72 bp | GCTACCAACAGAGATTCCATCAACTACTGGAAGCACTaGATTGAATCAGGATGGGGCAAAGTAAAATCTACA | + |
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Preference number: 3 (lower is better) Translates to: ATNRDSINYWKH*IESGWGKVKST Trigger: TGTAGATTTTACTTTGCCCCATCCTGATTCAATTCAGTGCTTCCAGTAGTTGATGGAATCTCTGTTGGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| 3UTR GCA 72 bp | GACACGTTCAAGTTCATTCTCTGCTTCATGGTCCTATaGATGAAGGTAAGGATTAAATTAGTTCCTTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: DTFKFILCFMVL*MKVRIKLVPWQ Trigger: TTGCCAAGGAACTAATTTAATCCTTACCTTCATGCATAGGACCATGAAGCAGAGAATGAACTTGAACGTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| 3UTR CCA 72 bp | AAACAAGATCACAATTACTCATCCCTGAAGTGGGTTTaGCTTAATGCCGCTTGTGTTAATTTTGGTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KQDHNYSSLKWV*LNAACVNFGLQ Trigger: TTGGAGACCAAAATTAACACAAGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR TCA 72 bp | TCTTGGGAGTTAATCCCTGATAAACCTGAGTCTTTGTaGTTTAAAACAAATGGTACATCTGTCCTGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SWELIPDKPESL*FKTNGTSVLPF Trigger: AAAAGGCAGGACAGATGTACCATTTGTTTTAAATCACAAAGACTCAGGTTTATCAGGGATTAACTCCCAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| 3UTR CCA 72 bp | ATTACAAAACAAGATCACAATTACTCATCCCTGAAGTaGGTTTGGCTTAATGCCGCTTGTGTTAATTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ITKQDHNYSSLK*VWLNAACVNFG Trigger: ACCAAAATTAACACAAGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTTTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR TCA 72 bp | CATAAATTACAAAACAAGATCACAATTACTCATCCCTaGAGTGGGTTTGGCTTAATGCCGCTTGTGTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: HKLQNKITITHP*SGFGLMPLVLI Trigger: AATTAACACAAGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTTTGTAATTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR TCA 72 bp | ATTTCCTACAATTCACAGGGACATGCTATTATGAAATaGGCTCATCAGACCTTAAAAGACAGACACATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ISYNSQGHAIMK*AHQTLKDRHIN Trigger: ATTTATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGTGAATTGTAGGAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGTGGCCACTTCCCTGACTGGGTCCGGGGTATCAGAGATGAGCTATAGAGTGTGCACCCTCTGGTaGGCATGGAGGTTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALVATSLTGSGVSEMSYRVCTLW*AWRFQA Trigger: GGCCTGGAACCTCCATGCCCACCAGAGGGTGCACAC...TCTATAGCTCATCTCTGATACCCCGGACCCAGTCAGGGAAGTGGCCACTAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGTGGCCACTTCCCTGACTGGGTCCGGGGTATCAGAGATGAGCTATAGAGGTGTGACAACTGAGTaGAGCCCTTCCCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALVATSLTGSGVSEMSYRGVTTE*SPSHSC Trigger: ACAGCTGTGGGAAGGGCTTCACTCAGTTGTCACACC...TCTATAGCTCATCTCTGATACCCCGGACCCAGTCAGGGAAGTGGCCACTAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGTGGCCACTTCCCTGACTGGGTCCGGGGTATCAGAGATGAGCTATAGAACTCTCTGGTGGGTGTaGAGGTTTGAGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVATSLTGSGVSEMSYRTLWWV*RFELQL Trigger: CAGCTGCAGCTCAAACCTTCACACCCACCAGAGAGT...TCTATAGCTCATCTCTGATACCCCGGACCCAGTCAGGGAAGTGGCCACTAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGTGGCCACTTCCCTGACTGGGTCCGGGGTATCAGAGATGAGCTATAGAGCCCTGAGCTCCAGATaGATTCCTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVATSLTGSGVSEMSYRALSSR*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCATCTGGAGCTCAGGGC...TCTATAGCTCATCTCTGATACCCCGGACCCAGTCAGGGAAGTGGCCACTAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTTCCCTCCGGGGAGGCTCTTCTaGTACCCTGTGGCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWTSHVKIQVSGPSGHFPPGRLF*YPVAGG Trigger: TCCTCCTGCCACAGGGTATCAGAAGAGCCTCCCCGG...AGGGAAGTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CAGACAAAGGCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCGCCCTGAGCTCCAGATaGATTCCTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTKAGLLGSQGLEGRVRSALSSR*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCATCTGGAGCTCAGGGC...GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGCCTTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CAGACAAAGGCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCGTGAGTCTGAAGTGCTaGGCTCTGACGGAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTKAGLLGSQGLEGRVRSVSLKC*ALTESL Trigger: AAGGCTTTCCGTCAGAGCTCAGCACTTCAGACTCAC...GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGCCTTTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGTGGCCACTTCCCTGACTGGGTCCGGGGTATCAGAGATGAGCTATAGAAGCTTGAGGCTGAAGTaGAACCCTTCCCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVATSLTGSGVSEMSYRSLRLK*NPSHTL Trigger: AAGAGTGTGGGAAGGGTTTCACTTCAGCCTCAAGCT...TCTATAGCTCATCTCTGATACCCCGGACCCAGTCAGGGAAGTGGCCACTAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATGGACTAGCGCCCAGAGACAAGGCTaGAGCCTTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GREGKKQNLHCRGIGWTSAQRQG*SLSHTP Trigger: AGGAGTGTGGGAAAGGCTTCAGCCTTGTCTCTGGGC...GCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATGGACTAGCGTGGGACTGGAGGTGTaGGACCTGACTGAACCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GREGKKQNLHCRGIGWTSVGLEV*DLTEPL Trigger: AAGCGGTTCAGTCAGGTCTCACACCTCCAGTCCCAC...GCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATGGACTAGCCCCCAGCAGAGAAGCTaGCCCAGTGAAAGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GREGKKQNLHCRGIGWTSPQQRS*PSERHL Trigger: AAGGTGCCTTTCACTGGGGCAGCTTCTCTGCTGGGG...GCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATGGACTAGCTTTTCCCACGGCTGTTaGCCCTGTAGGGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GREGKKQNLHCRGIGWTSFSHGC*PCRASP Trigger: GGGAGAAGCCCTACAGGGGCAACAGCCGTGGGAAAA...GCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | GCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCCCTGTATGGACCCGCTaGTGTCTTTGGAAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLLGSQGLEGRVRSRISPVWTR*CLWKLE Trigger: CTCAAGCTTCCAAAGACACCAGCGGGTCCATACAGG...GGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | GCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCTCTGACGGAAAGCCTTaGCACACTCTTGACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLLGSQGLEGRVRSRISSDGKP*HTLDTC Trigger: ACAGGTGTCAAGAGTGTGGCAAGGCTTTCCGTCAGA...GGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | GGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTTCCCTGTGTGCACTCTCTGGTaGGACTGGAGGTGTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GWTSHVKIQVSGPSGHFPVCTLW*DWRCET Trigger: GGTCTCACACCTCCAGTCCCACCAGAGAGTGCACAC...AGGGAAGTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTCCGGGGAGGCTCTTCTaGTACCCTGTGGCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTPGRLF*YPVAGG Trigger: TCCTCCTGCCACAGGGTATCAGAAGAGCCTCCCCGG...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CAGACAAAGGCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCATGAGTCTGAAGGTATaGAGTCCGACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTKAGLLGSQGLEGRVRSMSLKV*SPTEAL Trigger: AAGGGCTTCAGTCGGACTTCATACCTTCAGACTCAT...GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGCCTTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTTCCCTTGGAGGTGTGACAACTaGGTGAAGCCCTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GWTSHVKIQVSGPSGHFPWRCDN*VKPFPQ Trigger: CTGTGGGAAGGGCTTCACTCAGTTGTCACACCTCCA...AGGGAAGTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | CCTTCCACTGCCTCAAGAAGAAGGAACAAGAAAGAACAGCCAGGGCTGGCCTCCCTGAGCCAGCAGCTGTaGCTTGTTTTTCATCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTASRRRNKKEQPGLASLSQQL*LVFHQS Trigger: ACTCTGATGAAAAACAAGCCACAGCTGCTGGCTCAG...GGAGGCCAGCCCTGGCTGTTCTTTCTTGTTCCTTCTTCTTGAGGCAGTGGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCACTTTCCCTGAGTGTTaGTTACAGCTTCTAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLGSQGLEGRVRSRISTFPEC*LQLLEL Trigger: GAGCTCTAGAAGCTGTAATCAACACTCAGGGAAAGT...GGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATAGACAGAGACTTCGATACCTGCCACTTCCTTCATGACCACTTCAGCGGTGTGACAACTGAGTaGAGCCCTTCCCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSIDRDFDTCHFLHDHFSGVTTE*SPSHSC Trigger: ACAGCTGTGGGAAGGGCTTCACTCAGTTGTCACACC...GCTGAAGTGGTCATGAAGGAAGTGGCAGGTATCGAAGTCTCTGTCTATGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTGGAGGTGTGACAACTaGGTGAAGCCCTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GIGWTSHVKIQVSGPSGHWRCDN*VKPFPQ Trigger: CTGTGGGAAGGGCTTCACTCAGTTGTCACACCTCCA...GTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GTGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGCCCAGAGACAAGGCTaGAGCCTTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHASFIYESRELLGRCACAQRQG*SLSHTP Trigger: AGGAGTGTGGGAAAGGCTTCAGCCTTGTCTCTGGGC...ACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTTCCCTGACTTGAGGCAAGACTaGAGCCTTTCCCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GWTSHVKIQVSGPSGHFPDLRQD*SLSHSP Trigger: AGGACTGTGGGAAAGGCTTCAGTCTTGCCTCAAGTC...AGGGAAGTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATGGACTAGCTGCCTGGTGTCCTCCTaGGTACTATGTACAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GREGKKQNLHCRGIGWTSCLVSS*VLCTGE Trigger: TTCTCCTGTACATAGTACGCAGGAGGACACCAGGCA...GCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR CAA 72 bp | AGGTTGGCACTAGCCAGCCGACTGCCTTTCTTCACTTaGTACAGTCAGTCAGTCCTTGGTTTTCAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLALASRLPFFT*YSQSVLGFQKG Trigger: CCCCTTCTGAAAACCAAGGACTGACTGACTGTACAAAGTGAAGAAAGGCAGTCGGCTGGCTAGTGCCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGTGTACAGGAGAATGCTaGGCCAGCAGCTGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CMHLSFMNPESSWAGVHVCTGEC*ASSCGL Trigger: CAAGCCACAGCTGCTGGCTCAGCATTCTCCTGTACA...CACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTTTTTCCCACGGCTGTTaGCCCTGTAGGGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTFSHGC*PCRASP Trigger: GGGAGAAGCCCTACAGGGGCAACAGCCGTGGGAAAA...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATAGACAGAGACTTCGATACCTGCCACTTCCTTCATGACCACTTCAGCACCCGCTGGTGTCTTTaGAAGCTTGAGGCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSIDRDFDTCHFLHDHFSTRWCL*KLEAEV Trigger: CACTTCAGCCTCAAGCTTCCAAAGACACCAGCGGGT...GCTGAAGTGGTCATGAAGGAAGTGGCAGGTATCGAAGTCTCTGTCTATGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | GGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACACCCGCTGGTGTCTTTaGAAGCTTGAGGCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIGWTSHVKIQVSGPSGHTRWCL*KLEAEV Trigger: CACTTCAGCCTCAAGCTTCCAAAGACACCAGCGGGT...GTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTGTGTGCACTCTCTGGTaGGACTGGAGGTGTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTVCTLW*DWRCET Trigger: GGTCTCACACCTCCAGTCCCACCAGAGAGTGCACAC...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGCACATAAGACACTGAGGGAGGTGGCACTGCTCCAATaGGTGAGAACACTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKLLTGVSAHKTLREVALLQ*VRTLSL Trigger: CAGGGAAAGTGTTCTCACTCATTGGAGCAGTGCCAC...CTCCCTCAGTGTCTTATGTGCAGACACTCCTGTAAGCAGTTTTGGAGACCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTACTCTCTGGTGGGTGTaGAGGTTTGAGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTTLWWV*RFELQL Trigger: CAGCTGCAGCTCAAACCTTCACACCCACCAGAGAGT...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGGCCCGGAATTCAAGCTaGATTCCTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CMHLSFMNPESSWAGVHVARNSS*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCAGCTTGAATTCCGGGC...CACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TGCAGGGGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGCCCGGAATTCAAGCTaGATTCCTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CRGIGWTSHVKIQVSGPSARNSS*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCAGCTTGAATTCCGGGC...ACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGCCCCAGCAGAGAAGCTaGCCCAGTGAAAGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNAACVNFGLQNCLQECLPQQRS*PSERHL Trigger: AAGGTGCCTTTCACTGGGGCAGCTTCTCTGCTGGGG...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | TTCTCCATAGACAGAGACTTCGATACCTGCCACTTCCTTCATGACCACTTCAGCTCAGATCAGGAGAACTaGTATCCTCAGAATCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSIDRDFDTCHFLHDHFSSDQEN*YPQNPG Trigger: CCCGGGATTCTGAGGATAGCAGTTCTCCTGATCTGA...GCTGAAGTGGTCATGAAGGAAGTGGCAGGTATCGAAGTCTCTGTCTATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | GTGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTATCTTATTTGGACTCTaGCCTCCCACTGCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHASFIYESRELLGRCACILFGL*PPTARR Trigger: CCTCCTGGCAGTGGGAGGCCAGAGTCCAAATAAGAT...ACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | ACAGGGACATGCTATTATGAAATGAGCTCATCAGACCTTAAAAGACAGACACATGTGTGCACCCTCTGGTaGGCATGGAGGTTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGTCYYEMSSSDLKRQTHVCTLW*AWRFQA Trigger: GGCCTGGAACCTCCATGCCCACCAGAGGGTGCACAC...ATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGTGTACAGGAGAATGCTaGGCCAGCAGCTGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNAACVNFGLQNCLQECLCTGEC*ASSCGL Trigger: CAAGCCACAGCTGCTGGCTCAGCATTCTCCTGTACA...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTGTGAGTCTGAAGTGCTaGGCTCTGACGGAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTVSLKC*ALTESL Trigger: AAGGCTTTCCGTCAGAGCTCAGCACTTCAGACTCAC...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GTGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGTGAGCACTAAGCCCTaGGCTCCAGATGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHASFIYESRELLGRCACVSTKP*APDEFL Trigger: AAGGAATTCATCTGGAGCTCAGGGCTTAGTGCTCAC...ACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | TGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGTCAGATCAGGAGAACTaGTATCCTCAGAATCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CMHLSFMNPESSWAGVHVSDQEN*YPQNPG Trigger: CCCGGGATTCTGAGGATAGCAGTTCTCCTGATCTGA...CACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTTCTGACGGAAAGCCTTaGCACACTCTTGACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRGIGWTSHVKIQVSGPSSDGKP*HTLDTC Trigger: ACAGGTGTCAAGAGTGTGGCAAGGCTTTCCGTCAGA...ACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGTTTCTCTCTAGTGTaGACTTGGCGGTGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CRGIGWTSHVKIQVSGPSGFSLV*TWRWML Trigger: CAACATCCACCGCCAAGTGCACACTAGAGAGAAACC...ACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATAGACAGAGACTTCGATACCTGCCACTTCCTTCATGACCACTTCAGCACTTTCCCTGAGTGTTaGTTACAGCTTCTAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSIDRDFDTCHFLHDHFSTFPEC*LQLLEL Trigger: GAGCTCTAGAAGCTGTAATCAACACTCAGGGAAAGT...GCTGAAGTGGTCATGAAGGAAGTGGCAGGTATCGAAGTCTCTGTCTATGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTAGCTTGAGGCTGAAGTaGAACCCTTCCCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTSLRLK*NPSHTL Trigger: AAGAGTGTGGGAAGGGTTTCACTTCAGCCTCAAGCT...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | ACAAAACAAGATCACAATTACTCATCCCTGAAGTGGGTTTGGCTTAATGCCGCTGACTTGAGGCAAGACTaGAGCCTTTCCCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKQDHNYSSLKWVWLNAADLRQD*SLSHSP Trigger: AGGACTGTGGGAAAGGCTTCAGTCTTGCCTCAAGTC...AGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | ACAGGGACATGCTATTATGAAATGAGCTCATCAGACCTTAAAAGACAGACACATGTGGGACTGGAGGTGTaGGACCTGACTGAACCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGTCYYEMSSSDLKRQTHVGLEV*DLTEPL Trigger: AAGCGGTTCAGTCAGGTCTCACACCTCCAGTCCCAC...ATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGATCTTATTTGGACTCTaGCCTCCCACTGCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNAACVNFGLQNCLQECLILFGL*PPTARR Trigger: CCTCCTGGCAGTGGGAGGCCAGAGTCCAAATAAGAT...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | TGCAGGGGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTCTGAGCCAGCAGCTGTaGCTTGTTTTTCATCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CRGIGWTSHVKIQVSGPSLSQQL*LVFHQS Trigger: ACTCTGATGAAAAACAAGCCACAGCTGCTGGCTCAG...ACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR CAA 72 bp | GTGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTaGGGCAGGTGTGCATGTGCAACCTGTTGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHASFIYESREL*GRCACATCWKH Trigger: ATGCTTCCAACAGGTTGCACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGGTGAGCACTAAGCCCTaGGCTCCAGATGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNAACVNFGLQNCLQECLVSTKP*APDEFL Trigger: AAGGAATTCATCTGGAGCTCAGGGCTTAGTGCTCAC...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | ACAAAACAAGATCACAATTACTCATCCCTGAAGTGGGTTTGGCTTAATGCCGCTATGAGTCTGAAGGTATaGAGTCCGACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKQDHNYSSLKWVWLNAAMSLKV*SPTEAL Trigger: AAGGGCTTCAGTCGGACTTCATACCTTCAGACTCAT...AGCGGCATTAAGCCAAACCCACTTCAGGGATGAGTAATTGTGATCTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | GGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTTCTTCCTGGATAAATaGTTTCTTGAACTGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GIGWTSHVKIQVSGPSGHFFLDK*FLELAH Trigger: GTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAA...GTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATAGACAGAGACTTCGATACCTGCCACTTCCTTCATGACCACTTCAGCGTAGCGCTTTCTTCCTaGATAAATGCTTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSIDRDFDTCHFLHDHFSVALSS*INAFLN Trigger: GTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTAC...GCTGAAGTGGTCATGAAGGAAGTGGCAGGTATCGAAGTCTCTGTCTATGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGCACATAAGACACTGAGGGAGCTCTGGCTAGTTTGTTaGTATTATGGCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKLLTGVSAHKTLRELWLVC*YYGLFL Trigger: GAGAAACAAGCCATAATATCAACAAACTAGCCAGAG...CTCCCTCAGTGTCTTATGTGCAGACACTCCTGTAAGCAGTTTTGGAGACCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | GTGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTCTCTGGCTAGTTTGTTaGTATTATGGCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHASFIYESRELLGRCACLWLVC*YYGLFL Trigger: GAGAAACAAGCCATAATATCAACAAACTAGCCAGAG...ACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | TGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGCCAGACAGAAATTCCTaGTTTTCAGTAATGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CMHLSFMNPESSWAGVHVPDRNS*FSVMLE Trigger: TTCCAGCATTACTGAAAATCAGGAATTTCTGTCTGG...CACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | TTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGCACATAAGACACTGAGGGAGTTCTTCCTGGATAAATaGTTTCTTGAACTGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKLLTGVSAHKTLREFFLDK*FLELAH Trigger: GTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAA...CTCCCTCAGTGTCTTATGTGCAGACACTCCTGTAAGCAGTTTTGGAGACCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | ACAGGGACATGCTATTATGAAATGAGCTCATCAGACCTTAAAAGACAGACACATGGTTTCTCTCTAGTGTaGACTTGGCGGTGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTCYYEMSSSDLKRQTHGFSLV*TWRWML Trigger: CAACATCCACCGCCAAGTGCACACTAGAGAGAAACC...ATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | TGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGAAATCGCTTCTGGCATaGATTGCATTTGAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CMHLSFMNPESSWAGVHVKSLLA*IAFEWL Trigger: AAGCCATTCAAATGCAATGCATGCCAGAAGCGATTT...CACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR CAA 72 bp | ATACACAGCTGCTTGTCACTTTTAGTGGGAGTTTTATaGGCTAGTATTAAGCACTGGCCTGCTATCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IHSCLSLLVGVL*ASIKHWPAIWY Trigger: GTACCAGATAGCAGGCCAGTGCTTAATACTAGCCAATAAAACTCCCACTAAAAGTGACAAGCAGCTGTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTCCAGACAGAAATTCCTaGTTTTCAGTAATGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTPDRNS*FSVMLE Trigger: TTCCAGCATTACTGAAAATCAGGAATTTCTGTCTGG...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR GCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTAAATCGCTTCTGGCATaGATTGCATTTGAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTKSLLA*IAFEWL Trigger: AAGCCATTCAAATGCAATGCATGCCAGAAGCGATTT...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGAATGCTTTCTTGAACTaGCACACTGAAGCTATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNAACVNFGLQNCLQECLNAFLN*HTEAMP Trigger: AGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATT...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CCA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTGTAGCGCTTTCTTCCTaGATAAATGCTTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PNQRKILETWSLIASDWTVALSS*INAFLN Trigger: GTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTAC...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR CAA 72 bp | GTATTAATCATACTCTTAAAGAAACAGGCATTAAGGTaGGCACTAGCCAGCCGACTGCCTTTCTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLIILLKKQALR*ALASRLPFFTL Trigger: CAAAGTGAAGAAAGGCAGTCGGCTGGCTAGTGCCAACCTTAATGCCTGTTTCTTTAAGAGTATGATTAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| 3UTR CAA 72 bp | TGTGTGTTCAGCCTGAAAGAGGCATCCAATAGGTTATaGATAAATACACAGCTGCTTGTCACTTTTAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVFSLKEASNRL*INTQLLVTFSG Trigger: CCCACTAAAAGTGACAAGCAGCTGTGTATTTATCAATAACCTATTGGATGCCTCTTTCAGGCTGAACACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGTGCAGACAGTTTTTCTaGTGGTTCTGTCTTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LNAACVNFGLQNCLQECLCRQFF*WFCLFL Trigger: TAGGAAAAGACAGAACCATCAGAAAAACTGTCTGCA...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR TCA 90 bp | ACAGGGACATGCTATTATGAAATGAGCTCATCAGACCTTAAAAGACAGACACATTGCAGACAGTTTTTCTaGTGGTTCTGTCTTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TGTCYYEMSSSDLKRQTHCRQFF*WFCLFL Trigger: TAGGAAAAGACAGAACCATCAGAAAAACTGTCTGCA...ATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| 3UTR CAA 72 bp | CAAGTCTTGCTTCAATTTAGAAATTGCCTTTCTCTATaGGACACGTTCAAGTTCATTCTCTGCTTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVLLQFRNCLSL*DTFKFILCFMV Trigger: GACCATGAAGCAGAGAATGAACTTGAACGTGTCCAATAGAGAAAGGCAATTTCTAAATTGAAGCAAGACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | GCCCTAGTGGCCACTTCCCTGACTGGGTCCGGGGTATCAGAGATGAGCTATAGAAGCCTTGCCACACTCTaGACACCTGTAGCGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALVATSLTGSGVSEMSYRSLATL*TPVALS Trigger: AGAAAGCGCTACAGGTGTCAAGAGTGTGGCAAGGCT...TCTATAGCTCATCTCTGATACCCCGGACCCAGTCAGGGAAGTGGCCACTAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | CAGACAAAGGCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCGCCAGCAGCTGTGGCTaGTTTTTCATCAGAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTKAGLLGSQGLEGRVRSASSCG*FFIRVC Trigger: GCAGACTCTGATGAAAAACAAGCCACAGCTGCTGGC...GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGCCTTTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | GCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAGAATCTCCCAATCTCCATCTTATTaGGACTCTGGCCTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AGLLGSQGLEGRVRSRISQSPSY*DSGLPL Trigger: CAGTGGGAGGCCAGAGTCCAAATAAGATGGAGATTG...GGAGATTCTGCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | CAGACAAAGGCGGGACTTTTAGGATCCCAGGGCTTGGAAGGGAGGGTAAGAAGCAATTCTCTGATGGATTaGGAGACCAGACCTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTKAGLLGSQGLEGRVRSNSLMD*ETRPLA Trigger: GGCCAGAGGTCTGGTCTCCAAATCCATCAGAGAATT...GCTTCTTACCCTCCCTTCCAAGCCCTGGGATCCTAAAAGTCCCGCCTTTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS TCA 90 bp | AAGCTATGCCTGGTGTCCTCCTGCGTACTATGTACAGGAGAATGCTaGGCCAGCAGCTGTGGCTTGTTTTTCATCAGAGTCTGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: KLCLVSSCVLCTGEC*ASSCGLFFIRVCRQ Trigger: CTGTCTGCAGACTCTGATGAAAAACAAGCCACAGCTGCTGGCTCAGCATTCTCCTGTACATAGTACGCAGGAGGACACCAGGCATAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | GGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTTCCCTATACAGCTGAAGCGCTaGCCACAGTCGCCACACTTA | + |
|
Preference number: 5 (lower is better) Translates to: GWTSHVKIQVSGPSGHFPIQLKR*PQSPHL Trigger: TAAGTGTGGCGACTGTGGCAAGCGCTTCAGCTGTAT...AGGGAAGTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | GGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACCTGCAGCTGAAGCGTTaGCCACAGTCTCCACACTTA | + |
|
Preference number: 5 (lower is better) Translates to: GIGWTSHVKIQVSGPSGHLQLKR*PQSPHL Trigger: TAAGTGTGGAGACTGTGGCAAACGCTTCAGCTGCAG...GTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGAGGGTAAGAAGCAGAATCTCCATTGCAGGGGTATAGGATGGACTAGCCGCTTCTGGCATGCATaGCATTTGAATGGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GREGKKQNLHCRGIGWTSRFWHA*HLNGFL Trigger: CAAGAAGCCATTCAAATGCAATGCATGCCAGAAGCG...GCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCTTACCCTCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | TGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGAGCCTTGCCACACTCTaGACACCTGTAGCGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CMHLSFMNPESSWAGVHVSLATL*TPVALS Trigger: AGAAAGCGCTACAGGTGTCAAGAGTGTGGCAAGGCT...CACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | TGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGATACAGCTGAAGCGCTaGCCACAGTCGCCACACTTA | + |
|
Preference number: 5 (lower is better) Translates to: CMHLSFMNPESSWAGVHVIQLKR*PQSPHL Trigger: TAAGTGTGGCGACTGTGGCAAGCGCTTCAGCTGTAT...CACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
||
| CDS-3UTR CAA 90 bp | TGCAGGGGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTCGCTTCTGGCACTCATaGCATTGGAAGGGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CRGIGWTSHVKIQVSGPSRFWHS*HWKGFS Trigger: TGAGAAGCCCTTCCAATGCAATGAGTGCCAGAAGCG...ACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACCCCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS GCA 90 bp | GCTAGTTTGTTGATATTATGGCTTGTTTCTCCCCAGCAGAGAAGCTaGCCCAGTGAAAGGCACCTTAATCCTGTTGCGTCAACAATCTCC | + |
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Preference number: 5 (lower is better) Translates to: ASLLILWLVSPQQRS*PSERHLNPVASTIS Trigger: GGAGATTGTTGACGCAACAGGATTAAGGTGCCTTTCACTGGGGCAGCTTCTCTGCTGGGGAGAAACAAGCCATAATATCAACAAACTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CCA 90 bp | GTCCTCCTGCGTACTATGTACAGGAGAATGCTGAGCCAGCAGCTGTaGCTTGTTTTTCATCAGAGTCTGCAGACAGTTTTTCTGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: VLLRTMYRRMLSQQL*LVFHQSLQTVFLMV Trigger: AACCATCAGAAAAACTGTCTGCAGACTCTGATGAAAAACAAGCCACAGCTGCTGGCTCAGCATTCTCCTGTACATAGTACGCAGGAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CCA 90 bp | TTGACACCTGTAGCGCTTTCTTCCTGGATAAATGCTTTCTTGAACTaGCACACTGAAGCTATGCCTGGTGTCCTCCTGCGTACTATGTAC | + |
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Preference number: 5 (lower is better) Translates to: LTPVALSSWINAFLN*HTEAMPGVLLRTMY Trigger: GTACATAGTACGCAGGAGGACACCAGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTACAGGTGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTCTGCAGCTGAAGCGTTaGCCACAGTCTCCACACTTA | + |
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Preference number: 5 (lower is better) Translates to: PNQRKILETWSLIASDWTLQLKR*PQSPHL Trigger: TAAGTGTGGAGACTGTGGCAAACGCTTCAGCTGCAG...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | CCGAATCAAAGGAAGATACTGGAGACATGGTCCCTAATTGCATCTGATTGGACTCGCTTCTGGCACTCATaGCATTGGAAGGGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PNQRKILETWSLIASDWTRFWHS*HWKGFS Trigger: TGAGAAGCCCTTCCAATGCAATGAGTGCCAGAAGCG...AGTCCAATCAGATGCAATTAGGGACCATGTCTCCAGTATCTTCCTTTGATTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS TCA 90 bp | TGTAGCGCTTTCTTCCTGGATAAATGCTTTCTTGAACTGGCACACTaGAGCTATGCCTGGTGTCCTCCTGCGTACTATGTACAGGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: CSAFFLDKCFLELAH*SYAWCPPAYYVQEN Trigger: ATTCTCCTGTACATAGTACGCAGGAGGACACCAGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | GGTATAGGATGGACTAGCCATGTAAAAATTCAGGTAAGTGGCCCTAGTGGCCACTGGATAAATGCTTTCTaGAACTGGCACACTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: GIGWTSHVKIQVSGPSGHWINAF*NWHTEA Trigger: AGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCA...GTGGCCACTAGGGCCACTTACCTGAATTTTTACATGGCTAGTCCATCCTATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | TTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGCACATAAGACACTGAGGGAGTGGATAAATGCTTTCTaGAACTGGCACACTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: FWSPKLLTGVSAHKTLREWINAF*NWHTEA Trigger: AGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCA...CTCCCTCAGTGTCTTATGTGCAGACACTCCTGTAAGCAGTTTTGGAGACCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | CTTAATGCCGCTTGTGTTAATTTTGGTCTCCAAAACTGCTTACAGGAGTGTCTGCGCTTCTGGCATGCATaGCATTTGAATGGCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LNAACVNFGLQNCLQECLRFWHA*HLNGFL Trigger: CAAGAAGCCATTCAAATGCAATGCATGCCAGAAGCG...CAGACACTCCTGTAAGCAGTTTTGGAGACCAAAATTAACACAAGCGGCATTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | ACAGGGACATGCTATTATGAAATGAGCTCATCAGACCTTAAAAGACAGACACATCAATCTCCATCTTATTaGGACTCTGGCCTCCCACTG | + |
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Preference number: 5 (lower is better) Translates to: TGTCYYEMSSSDLKRQTHQSPSY*DSGLPL Trigger: CAGTGGGAGGCCAGAGTCCAAATAAGATGGAGATTG...ATGTGTCTGTCTTTTAAGGTCTGATGAGCTCATTTCATAATAGCATGTCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | GTGCATGCATCTTTCATTTATGAATCCAGAGAGCTCTTGGGCAGGTGTGCATGTGCTCTGGCTAGTTTGTaGATATTATGGCTTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VHASFIYESRELLGRCACALASL*ILWLVS Trigger: AGAAACAAGCCATAATATCAACAAACTAGCCAGAGC...ACATGCACACCTGCCCAAGAGCTCTCTGGATTCATAAATGAAAGATGCATGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056683.3 ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | TTTAGAAATTGCCTTTCTCTATTGGACACGTTCAAGTTCATTCTCTGCTTCATGAATTCTCTGATGGATTaGGAGACCAGACCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: FRNCLSLLDTFKFILCFMNSLMD*ETRPLA Trigger: GGCCAGAGGTCTGGTCTCCAAATCCATCAGAGAATT...CATGAAGCAGAGAATGAACTTGAACGTGTCCAATAGAGAAAGGCAATTTCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| CDS-3UTR CAA 90 bp | TTTAGAAATTGCCTTTCTCTATTGGACACGTTCAAGTTCATTCTCTGCTTCATGGCTCTGGCTAGTTTGTaGATATTATGGCTTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FRNCLSLLDTFKFILCFMALASL*ILWLVS Trigger: AGAAACAAGCCATAATATCAACAAACTAGCCAGAGC...CATGAAGCAGAGAATGAACTTGAACGTGTCCAATAGAGAAAGGCAATTTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086006.12 |
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| CDS TCA 72 bp | GTGTGCACTCTCTGGTGGGACTGGAGGTGTGAGACCTaGCTGAACCGCTTCTGGCACTCATTGCATTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VCTLWWDWRCET*LNRFWHSLHWK Trigger: CTTCCAATGCAATGAGTGCCAGAAGCGGTTCAGTCAGGTCTCACACCTCCAGTCCCACCAGAGAGTGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CAA 90 bp | CTCCCCAGCAGAGAAGCTGCCCCAGTGAAAGGCACCTTAATCCTGTaGCGTCAACAATCTCCATCTTATTTGGACTCTGGCCTCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: LPSREAAPVKGTLIL*RQQSPSYLDSGLPL Trigger: CAGTGGGAGGCCAGAGTCCAAATAAGATGGAGATTGTTGACGCAACAGGATTAAGGTGCCTTTCACTGGGGCAGCTTCTCTGCTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS TCA 72 bp | GGACCCGCTGATGGCTGTGGAAGTTGCATCTCAAGTTaGAGGGCTTCCCATAATCACACTTGGACGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GPADGCGSCISS*RASHNHTWTVC Trigger: GCAAACCGTCCAAGTGTGATTATGGGAAGCCCTTCAACTTGAGATGCAACTTCCACAGCCATCAGCGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS TCA 72 bp | CTGGTGTCCTCCTGCGTACTATGTACAGGAGAATGCTaGGCCAGCAGCTGTGGCTTGTTTTTCATCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: LVSSCVLCTGEC*ASSCGLFFIRV Trigger: GACTCTGATGAAAAACAAGCCACAGCTGCTGGCTCAGCATTCTCCTGTACATAGTACGCAGGAGGACACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CCA 72 bp | GTAGCGCTTTCTTCCTGGATAAATGCTTTCTTGAACTaGCACACTGAAGCTATGCCTGGTGTCCTCCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: VALSSWINAFLN*HTEAMPGVLLR Trigger: ACGCAGGAGGACACCAGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CAA 90 bp | ACACTCTTGACACCTGTAGCGCTTTCTTCCTGGATAAATGCTTTCTaGAACTGGCACACTGAAGCTATGCCTGGTGTCCTCCTGCGTACT | + |
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Preference number: 6 (lower is better) Translates to: TLLTPVALSSWINAF*NWHTEAMPGVLLRT Trigger: AGTACGCAGGAGGACACCAGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTACAGGTGTCAAGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS GCA 72 bp | TTGATATTATGGCTTGTTTCTCCCCAGCAGAGAAGCTaGCCCAGTGAAAGGCACCTTAATCCTGTTGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LILWLVSPQQRS*PSERHLNPVAS Trigger: TGACGCAACAGGATTAAGGTGCCTTTCACTGGGGCAGCTTCTCTGCTGGGGAGAAACAAGCCATAATATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS GCA 72 bp | ATGGAGGTTCCAGGCCTGACTAAATCGCTTCTGGCATaGATTGCATTTGAATGGCTTCTTGCCAGTTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: MEVPGLTKSLLA*IAFEWLLASFD Trigger: GTCGAAACTGGCAAGAAGCCATTCAAATGCAATGCATGCCAGAAGCGATTTAGTCAGGCCTGGAACCTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CAA 72 bp | ACACCTGTAGCGCTTTCTTCCTGGATAAATGCTTTCTaGAACTGGCACACTGAAGCTATGCCTGGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TPVALSSWINAF*NWHTEAMPGVL Trigger: GAGGACACCAGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTACAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS TCA 72 bp | CCCCAAGAACCCTGGGCTCTCCCAGACAGAAATTCCTaGTTTTCAGTAATGCTGGAATGGTCATTTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PQEPWALPDRNS*FSVMLEWSFVR Trigger: TCTGACAAATGACCATTCCAGCATTACTGAAAATCAGGAATTTCTGTCTGGGAGAGCCCAGGGTTCTTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CCA 72 bp | CTTGCCACACTCTTGACACCTGTAGCGCTTTCTTCCTaGATAAATGCTTTCTTGAACTGGCACACTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LATLLTPVALSS*INAFLNWHTEA Trigger: AGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTACAGGTGTCAAGAGTGTGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS TCA 72 bp | TTCTTCCTGGATAAATGCTTTCTTGAACTGGCACACTaGAGCTATGCCTGGTGTCCTCCTGCGTACTATGTA | + |
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Preference number: 6 (lower is better) Translates to: FFLDKCFLELAH*SYAWCPPAYYV Trigger: TACATAGTACGCAGGAGGACACCAGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS TCA 72 bp | GAATCCTCTTGTGAGCCTGGAGAAGCGAACACTGCATaGAGCGCTTCTTACACACTTTACATGTGTAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: ESSCEPGEANTA*SASYTLYMCKV Trigger: AACCTTACACATGTAAAGTGTGTAAGAAGCGCTTCATGCAGTGTTCGCTTCTCCAGGCTCACAAGAGGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CCA 72 bp | CGTACTATGTACAGGAGAATGCTGAGCCAGCAGCTGTaGCTTGTTTTTCATCAGAGTCTGCAGACAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: RTMYRRMLSQQL*LVFHQSLQTVF Trigger: AAAAACTGTCTGCAGACTCTGATGAAAAACAAGCCACAGCTGCTGGCTCAGCATTCTCCTGTACATAGTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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| CDS CAA 72 bp | GTGTTGATTACAGCTTCTAGAGCTCTGGCTAGTTTGTaGATATTATGGCTTGTTTCTCCCCAGCAGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: VLITASRALASL*ILWLVSPQQRS Trigger: GCTTCTCTGCTGGGGAGAAACAAGCCATAATATCAACAAACTAGCCAGAGCTCTAGAAGCTGTAATCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056683.3 ENSMUST00000073833.14 ENSMUST00000086006.12 |
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