Pregenerated sensors for ZFP110 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058638Ensembl transcript IDs: ENSMUST00000004614.15, ENSMUST00000168247.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTGATGGTTTCACTCACTaGCTGCTAGGTGGTGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LASESKQAKRASFFLPCPDGFTH*LLGGVL Trigger: CAGGACACCACCTAGCAGGCAGTGAGTGAAACCATC...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTTGGCTGAGCGGTCGTTaGAGGTCCTCCCACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGWLSGR*RSSHTL Trigger: CAGAGTGTGGGAGGACCTTCAACGACCGCTCAGCCA...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTGTGCTGAGAGATGGCTaGGCGGTCGTTGAAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPVLRDG*AVVEGP Trigger: AGGACCTTCAACGACCGCTCAGCCATCTCTCAGCAC...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTCTGCCACTCCTGCCTTaGCACTCCACAGAGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPLPLLP*HSTESF Trigger: GAAGGACTCTGTGGAGTGGCAAGGCAGGAGTGGCAG...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGTCACTGGCTCTCCCTaGCCCAGACTCCATCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGVTGSP*PRLHLV Trigger: CACCAGATGGAGTCTGGGGCAGGGAGAGCCAGTGAC...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATGTGTCACAGGAGTGCTaGCACTCCTGCCTTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDVSQEC*HSCLAT Trigger: AGTGGCAAGGCAGGAGTGGCAGCACTCCTGTGACAC...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGTCCCAGGTTTTCCCTaGTCAGAACCCTGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGVPGFP*SEPCCW Trigger: CCAGCAACAGGGTTCTGAGCAGGGAAAACCTGGGAC...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAGCTGTTGAGCTGGCTTaGGGTTACCTGGGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASESKQAKRASFFLPCPLAVELA*GYLGSS Trigger: ACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGC...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATAAGCCACCACTGCTTTaGAATCTTCTGGGTGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDKPPLL*NLLGAA Trigger: CGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTT...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTATGGGACATAGCCTTCTaGGGACCAGCTGACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ASESKQAKRASFFLPCPLWDIAF*GPADSS Trigger: TGAAGAGTCAGCTGGTCCCCAGAAGGCTATGTCCCA...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTCGACTAGTTTGGTCTTaGGACTTGGAGCTTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPRLVWS*DLELSE Trigger: CTCTGAAAGCTCCAAGTCTCAAGACCAAACTAGTCG...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTAAGAACTTCATTGAGTaGGCCCTGGCTTTTGTGACG | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPKNFIE*ALAFVT Trigger: CGTCACAAAAGCCAGGGCTCACTCAATGAAGTTCTT...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATAATTGTTGGCTCTCCTaGGCCTTCCCACATCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDNCWLS*AFPHQN Trigger: GTTCTGATGTGGGAAGGCTCAGGAGAGCCAACAATT...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATTTGGAAGTCCAGCTGTaGCCACTCTTCCTCGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDLEVQL*PLFLGK Trigger: TTTACCGAGGAAGAGTGGGCACAGCTGGACTTCCAA...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATAGTCAAACGCTTGCTTaGCTGTTGAGCTGGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDSQTLA*LLSWLE Trigger: CTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACT...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATTCTTTGAACGTGTATTaGGCTGCAGCCACTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDSLNVY*AAATGD Trigger: GTCACCAGTGGCTGCAGCCCAATACACGTTCAAAGA...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTGGCTGCAGCCACTGGTaGCACAGCTTACGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVGCSHW*HSLRSW Trigger: CCAGCTTCGTAAGCTGTGTCACCAGTGGCTGCAGCC...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTACTTTTCTCCTTTAGTTaGTCAGTGGCCTCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASESKQAKRASFFLPCPLLFSFS*SVASLE Trigger: CTCCAGTGAGGCCACTGATCAACTAAAGGAGAAAAG...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTCAGAGAACTTCTTCTaGGGATGGCCTTTTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPSENFF*GWPFSC Trigger: ACAGGAAAAAGGCCATCCTCAGAAGAAGTTCTCTGA...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTATAAAGGATATCTGCTaGGCATGCAGGCTGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGIKDIC*ACRLKA Trigger: AGCCTTCAGCCTGCATGCTCAGCAGATATCCTTTAT...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTATGCCCAATAAGGTGTaGGCTCTGTGTGAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGMPNKV*ALCECL Trigger: AAGGCATTCACACAGAGCTCACACCTTATTGGGCAT...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATAAACTTCTCAGGCAGTaGATTCAGGAACTGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDKLLRQ*IQELLE Trigger: CTCGAGCAGTTCCTGAATGCACTGCCTGAGAAGTTT...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTAATTTCTCTCTGCATTaGCCAGCAGTCTTCGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPNFSLH*PAVFGF Trigger: AAAGCCGAAGACTGCTGGCCAATGCAGAGAGAAATT...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATCTCGTGTCATGGAAATaGTGTTTGTCCTGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDLVSWK*CLSCLS Trigger: GGAAAGGCAGGACAAACACCATTTCCATGACACGAG...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTGTAAACCTCGTGTCATaGAAATGGTGTTTGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPVNLVS*KWCLSC Trigger: GCAGGACAAACACCATTTCCATGACACGAGGTTTAC...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCGGTCCTCCCACACTCTaGACACTCAAATGGTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAGPPTL*TLKWSL Trigger: GAGAGACCATTTGAGTGTTCAGAGTGTGGGAGGACC...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTCAAAGACAGTAGACTaGGTACCATTCCTTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPSKTVD*VPFLER Trigger: TCTCTCAAGGAATGGTACCCAGTCTACTGTCTTTGA...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCGGCCGCTCTCCTGTGTaGATCTTCTTATGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAGRSPV*IFLWTE Trigger: CTCTGTCCATAAGAAGATCCACACAGGAGAGCGGCC...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTCGCTTGCTTGGCTGTTaGGCTGGCTTGAGGTTACCT | + |
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Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVRLLGC*AGLRLP Trigger: AGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCG...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCCTTCTGGGGACCAGCTaGCTCTTCATACTGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTALLGTS*LFILEM Trigger: CATTTCCAGTATGAAGAGTCAGCTGGTCCCCAGAAG...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTATCTAGCATCACATCATaGTACTCAGTCTTCTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: ASESKQAKRASFFLPCPLSSITS*YSVFCV Trigger: AACGCAGAAGACTGAGTATCATGATGTGATGCTAGA...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTTGTGTTTGGGTCATaGATTGGTTTTACCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPFVFGS*IGFTTG Trigger: TCCTGTGGTAAAACCAATTCATGACCCAAACACAAA...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAGAACCCTTCTGGTaGGGTTTTATATGTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LASESKQAKRASFFLPCPLEPFW*GFICFQ Trigger: CTGGAAACATATAAAACCTCACCAGAAGGGTTCTAA...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCAGGTTGTTGGAAGCGTaGAAGCCATACTGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTARLLEA*KPYCPP Trigger: TGGAGGACAGTATGGCTTCCACGCTTCCAACAACCT...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTCACCGGCTCCTCAGCTaGAACCTCAGCTGCAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVHRLLS*NLSCKS Trigger: ACTTTTGCAGCTGAGGTTCCAGCTGAGGAGCCGGTG...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAGTTTTACCACAGGAATaGGAGAGTCTGGAGTTAACT | + |
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Preference number: 4 (lower is better) Translates to: ASESKQAKRASFFLPCPLVLPQE*ESLELT Trigger: AGTTAACTCCAGACTCTCCCATTCCTGTGGTAAAAC...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAGTTTGGGTCATGAATTaGTTTTACCACAGGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: ASESKQAKRASFFLPCPLVWVMN*FYHRNG Trigger: CCCATTCCTGTGGTAAAACCAATTCATGACCCAAAC...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTAGAGACTGTTGTCACTaGCTCTCCCTGCCCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVRDCCH*LSLPQT Trigger: AGTCTGGGGCAGGGAGAGCCAGTGACAACAGTCTCT...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATTTTGGCTTTGAAAAGTaGTGCTCCACTGAAATCATG | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDFGFEK*CSTEIM Trigger: CATGATTTCAGTGGAGCATCACTTTTCAAAGCCAAA...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATTCCACAGAGTCCTTCTaGTGTTTTCTTATGCGTAAA | + |
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Preference number: 4 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDSTESF*CFLMRK Trigger: TTTACGCATAAGAAAACAGCAGAAGGACTCTGTGGA...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCGGAGCTCTGAACAAATaGTTTCCCACAGGCCATACA | + |
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Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAGALNK*FPTGHT Trigger: TGTATGGCCTGTGGGAAAGCATTTGTTCAGAGCTCC...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR CCA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAGTGTGGATCTTCTTATaGACAGAGAAATACCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: ASESKQAKRASFFLPCPLVWIFL*TEKYLA Trigger: TGCTAGGTATTTCTCTGTCCATAAGAAGATCCACAC...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCCCAGACTCCATCTGGTaGTTTTGTACAGATGAACCT | + |
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Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAPDSIW*FCTDEP Trigger: AGGTTCATCTGTACAAAATCACCAGATGGAGTCTGG...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCATCCCATGTGTTTTCTaGTGCCCAATAAGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAIPCVF*CPIRCE Trigger: CTCACACCTTATTGGGCATCAGAAAACACATGGGAT...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR GCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTCTTTCCCCAACTTTATaGCATTCAGGGCCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVLSPTL*HSGPFW Trigger: CCAGAAAGGCCCTGAATGGCATAAAGTTGGGGAAAG...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
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| CDS-3UTR TCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCATTCCCCACTTGATTTaGTTCTATGGTGTGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAIPHLI*FYGVHF Trigger: GAAATGCACACCATAGAATCAAATCAAGTGGGGAAT...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTAAATGGTGTTTGTCCTaGCTTTCCTCTTTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVKWCLS*LSSFQC Trigger: GCACTGGAAAGAGGAAAGGCAGGACAAACACCATTT...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTGCTGACTCTTCATACTaGAAATGTCGGAACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVADSSY*KCRNFW Trigger: CCAGAAGTTCCGACATTTCCAGTATGAAGAGTCAGC...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTTCTGCTGTTTTCTTATaGGTAAACCTCGTGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVSAVFL*VNLVSW Trigger: CCATGACACGAGGTTTACGCATAAGAAAACAGCAGA...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR TCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTTCTGGAAGAGTATCTTaGGGAATTTCTCTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVSGRVS*GISLCI Trigger: AATGCAGAGAGAAATTCCTCAAGATACTCTTCCAGA...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTAGGCCAAGAACATTCTaGAAGAGTATCTTGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVRPRTF*KSILRN Trigger: ATTCCTCAAGATACTCTTCCAGAATGTTCTTGGCCT...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCGAGATCTTTTGTGTTTaGGTCATGAATTGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAEIFCV*VMNWFY Trigger: GTAAAACCAATTCATGACCCAAACACAAAAGATCTC...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTTTTGGTCTTGAGACTTaGAGCTTTCAGAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVFGLET*SFQRTS Trigger: AGAAGTTCTCTGAAAGCTCCAAGTCTCAAGACCAAA...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAGGATAAATGAAGCAATTAAGAACTCCCTGATGGTTTCACTCACTGCCATGAACCTTGTAACATaGAATTGTTACTTTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRINEAIKNSLMVSLTAMNLVT*NCYFPQ Trigger: TTGGGGAAAGTAACAATTCCATGTTACAAGGTTCAT...GGCAGTGAGTGAAACCATCAGGGAGTTCTTAATTGCTTCATTTATCCTCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR TCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTATTTGGGCTGCTTCTTaGATTTTATCCCATGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVIWAAS*ILSHVF Trigger: AAACACATGGGATAAAATTCAAGAAGCAGCCCAAAT...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTTTTCCAGTGCCCTTCTaGTTAACTTTTACATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVFPVPF*LTFTYF Trigger: AAAGTATGTAAAAGTTAAGCAGAAGGGCACTGGAAA...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS CCA 90 bp | GCTTGGCTGTTGAGCTGGCTTGAGGTTACCTGGGTTCAAGTCTTCTaGATAGAGGGATTGAATCAGGGCATTCCGAGGACCAGCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: AWLLSWLEVTWVQVF*IEGLNQGIPRTSHI Trigger: GATGTGGCTGGTCCTCGGAATGCCCTGATTCAATCCCTCTATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS CCA 90 bp | TCGGAACTTCTGGCGAGAAGCTTCAGTGTCAGTCAAACGCTTGCTTaGCTGTTGAGCTGGCTTGAGGTTACCTGGGTTCAAGTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SELLARSFSVSQTLA*LLSWLEVTWVQVFW Trigger: CCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACACTGAAGCTTCTCGCCAGAAGTTCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS CCA 90 bp | CGAGGTCATATTCTCCAACAAAGCCACCACTGCTTTGCAATCTTCTaGGTGCTGCGACTCTACCCATACCCGAAACTTCTCAGGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGHILQQSHHCFAIF*VLRLYPYPKLLRQC Trigger: GCACTGCCTGAGAAGTTTCGGGTATGGGTAGAGTCGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTTGTTGGAGAATATGACCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATGCTGCCACTCCTGCCTaGCCACTCCACAGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDAATPA*PLHRVL Trigger: AAGGACTCTGTGGAGTGGCAAGGCAGGAGTGGCAGC...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS GCA 90 bp | TTTATGGAGGAGCCATGTGTCACAGGAGTGCTGCCACTCCTGCCTTaGCACTCCACAGAGTCCTTCTGCTGTTTTCTTATGCGTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: FMEEPCVTGVLPLLP*HSTESFCCFLMRKP Trigger: AGGTTTACGCATAAGAAAACAGCAGAAGGACTCTGTGGAGTGGCAAGGCAGGAGTGGCAGCACTCCTGTGACACATGGCTCCTCCATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS CCA 90 bp | GCGAGAAGCTTCAGTGTCAGTCAAACGCTTGCTTGGCTGTTGAGCTaGCTTGAGGTTACCTGGGTTCAAGTCTTCTGGATAGAGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSFSVSQTLAWLLS*LEVTWVQVFWIEGL Trigger: CAATCCCTCTATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACACTGAAGCTTCTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTGTACAGGCACTTCTGTaGGAAGTCCAGCTGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LASESKQAKRASFFLPCPVQALL*EVQLCP Trigger: TGGGCACAGCTGGACTTCCAACAGAAGTGCCTGTAC...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS TCA 90 bp | AAAGTAACTGGTAAGGTGGCCACACCCTTCCTTTTCTCCTTTAGTTaGTCAGTGGCCTCACTGGAGCAGGCAAGCGAAGCATCGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KVTGKVATPFLFSFS*SVASLEQASEASSL Trigger: TAAGGACGATGCTTCGCTTGCCTGCTCCAGTGAGGCCACTGATCAACTAAAGGAGAAAAGGAAGGGTGTGGCCACCTTACCAGTTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS GCA 90 bp | GTCATATTCTCCAACAAAGCCACCACTGCTTTGCAATCTTCTGGGTaGTGCGACTCTACCCATACCCGAAACTTCTCAGGCAGTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VIFSNKATTALQSSG*CDSTHTRNFSGSAF Trigger: GAATGCACTGCCTGAGAAGTTTCGGGTATGGGTAGAGTCGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTTGTTGGAGAATATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS GCA 90 bp | ATCGTCCTTAGACACCGAGGTCATATTCTCCAACAAAGCCACCACTaGTTTGCAATCTTCTGGGTGCTGCGACTCTACCCATACCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVLRHRGHILQQSHH*FAIFWVLRLYPYPK Trigger: TTTCGGGTATGGGTAGAGTCGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTTGTTGGAGAATATGACCTCGGTGTCTAAGGACGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS GCA 90 bp | CACTCCTGCCTTGCCACTCCACAGAGTCCTTCTGCTGTTTTCTTATaGGTAAACCTCGTGTCATGGAAATGGTGTTTGTCCTGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSCLATPQSPSAVFL*VNLVSWKWCLSCLS Trigger: GGAAAGGCAGGACAAACACCATTTCCATGACACGAGGTTTACGCATAAGAAAACAGCAGAAGGACTCTGTGGAGTGGCAAGGCAGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTTGTGTCAAGAGACTGTaGTCACTGGCTCTCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGCVKRL*SLALPA Trigger: GGCAGGGAGAGCCAGTGACAACAGTCTCTTGACACA...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAAAAGCCACCACTGCTTaGCAATCTTCTGGGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASESKQAKRASFFLPCPLKATTA*QSSGCC Trigger: GCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTT...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS TCA 90 bp | AAGCTTCAGTGTCAGTCAAACGCTTGCTTGGCTGTTGAGCTGGCTTaGGGTTACCTGGGTTCAAGTCTTCTGGATAGAGGGATTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: KLQCQSNACLAVELA*GYLGSSLLDRGIES Trigger: TGATTCAATCCCTCTATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACACTGAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS CCA 90 bp | CCACAGAGTCCTTCTGCTGTTTTCTTATGCGTAAACCTCGTGTCATaGAAATGGTGTTTGTCCTGCCTTTCCTCTTTCCAGTGCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQSPSAVFLCVNLVS*KWCLSCLSSFQCPS Trigger: AGAAGGGCACTGGAAAGAGGAAAGGCAGGACAAACACCATTTCCATGACACGAGGTTTACGCATAAGAAAACAGCAGAAGGACTCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS-3UTR CAA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTCTAGGAAGAACTTCATaGAGTGAGCCCTGGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LASESKQAKRASFFLPCPLGRTS*SEPWLL Trigger: CAAAAGCCAGGGCTCACTCAATGAAGTTCTTCCTAG...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTCATGGAAATGGTGTTaGTCCTGCCTTTCCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LASESKQAKRASFFLPCPSWKWC*SCLSSF Trigger: GAAAGAGGAAAGGCAGGACAAACACCATTTCCATGA...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTAAGGCTTTCCTACAATaGTTGGCTCTCCTGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGKAFLQ*LALLSL Trigger: AAGGCTCAGGAGAGCCAACAATTGTAGGAAAGCCTT...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | CTAGCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTACTACATCGGCAAACTaGGCTCCCCTTGTGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LASESKQAKRASFFLPCPTTSAN*APLVNF Trigger: AAAATTCACAAGGGGAGCCAAGTTTGCCGATGTAGT...AGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS TCA 90 bp | AAGAGACTGTTGTCACTGGCTCTCCCTGCCCCAGACTCCATCTGGTaGTTTTGTACAGATGAACCTTGTAACATGGAATTGTTACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRLLSLALPAPDSIW*FCTDEPCNMELLLS Trigger: GGAAAGTAACAATTCCATGTTACAAGGTTCATCTGTACAAAATCACCAGATGGAGTCTGGGGCAGGGAGAGCCAGTGACAACAGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS TCA 90 bp | GAAGTGCTAAGTTCCTCGACTCTTTCCCCTTTAGAACCCTTCTGGTaGGGTTTTATATGTTTCCAGGAATTCCTGTTCCCTTGGACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EVLSSSTLSPLEPFW*GFICFQEFLFPWTF Trigger: AAACGTCCAAGGGAACAGGAATTCCTGGAAACATATAAAACCTCACCAGAAGGGTTCTAAAGGGGAAAGAGTCGAGGAACTTAGCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS CCA 90 bp | CTTCATCAGGGGACTCTTAGAAGGAAAGGAATTCATTCCAGGGTCTaGAGAAGGCCAAGAACATTCTGGAAGAGTATCTTGAGGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHQGTLRRKGIHSRV*RRPRTFWKSILRNF Trigger: GAAATTCCTCAAGATACTCTTCCAGAATGTTCTTGGCCTTCTCCAGACCCTGGAATGAATTCCTTTCCTTCTAAGAGTCCCCTGATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS TCA 90 bp | GTAGACTGGGTACCATTCCTTGAGAGATCTTTTGTGTTTGGGTCATaGATTGGTTTTACCACAGGAATGGGAGAGTCTGGAGTTAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VDWVPFLERSFVFGS*IGFTTGMGESGVNS Trigger: AGAGTTAACTCCAGACTCTCCCATTCCTGTGGTAAAACCAATTCATGACCCAAACACAAAAGATCTCTCAAGGAATGGTACCCAGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS GCA 90 bp | CATAAGTATACTCTCTTTAGAGCCAGTGGCTTTCTGGTAAACTTTTaGAGGCACAGTAAGTGTAATGGGATCTCTACTGGTCCCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HKYTLFRASGFLVNF*RHSKCNGISTGPRF Trigger: AAACCTGGGACCAGTAGAGATCCCATTACACTTACTGTGCCTGCAAAAGTTTACCAGAAAGCCACTGGCTCTAAAGAGAGTATACTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAATATCACATTTGGCTTaGAAAAGTGATGCTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASESKQAKRASFFLPCPLISHLA*KSDAPL Trigger: CAGTGGAGCATCACTTTTCAAAGCCAAATGTGATAT...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | ATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTGATGCTGAGATATCACATTaGGCTTTGAAAAGTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPKNPVVVQFTRQDVSGDAEISH*ALKSDA Trigger: AGCATCACTTTTCAAAGCCAAATGTGATATCTCAGC...ATCACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | AGAATCCCCAAAAATCCAGTAGTTGTTCAGTTCACGAGGCAGGATGTCTCAGGTTCCTTGAGAGATCTTTaGTGTTTGGGTCATGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: RIPKNPVVVQFTRQDVSGSLRDL*CLGHEL Trigger: CAATTCATGACCCAAACACAAAAGATCTCTCAAGGA...ACCTGAGACATCCTGCCTCGTGAACTGAACAACTACTGGATTTTTGGGGATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAATGGTGTGCATTTCTTaGACCCCATCTTCTAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: ASESKQAKRASFFLPCPLMVCIS*TPSSKI Trigger: TATCTTAGAAGATGGGGTCAAAGAAATGCACACCAT...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTACATTTTATGGAAGCATaGATTTCCCTGTCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASESKQAKRASFFLPCPLHFMEA*ISLSFP Trigger: AGGAAAAGACAGGGAAATCAATGCTTCCATAAAATG...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS-3UTR CAA 90 bp | GCTAGTGAGAGCAAACAGGCAAAGAGGGCAAGCTTCTTTCTTCCATGTCCTTTAAATTTGGGCTGCTTCTaGAATTTTATCCCATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASESKQAKRASFFLPCPLNLGCF*NFIPCV Trigger: AACACATGGGATAAAATTCAAGAAGCAGCCCAAATT...TAAAGGACATGGAAGAAAGAAGCTTGCCCTCTTTGCCTGTTTGCTCTCACTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS TCA 90 bp | CTTCTGCTTAACTTTTACATACTTTCTAGGAAGAACTTCATTGAGTaGGCCCTGGCTTTTGTGACGACTAGTTTGGTCTTGAGACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLNFYILSRKNFIE*ALAFVTTSLVLRLG Trigger: TCCAAGTCTCAAGACCAAACTAGTCGTCACAAAAGCCAGGGCTCACTCAATGAAGTTCTTCCTAGAAAGTATGTAAAAGTTAAGCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS GCA 90 bp | ATGGAAATGGTGTTTGTCCTGCCTTTCCTCTTTCCAGTGCCCTTCTaGTTAACTTTTACATACTTTCTAGGAAGAACTTCATTGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MEMVFVLPFLFPVPF*LTFTYFLGRTSLSE Trigger: CTCACTCAATGAAGTTCTTCCTAGAAAGTATGTAAAAGTTAAGCAGAAGGGCACTGGAAAGAGGAAAGGCAGGACAAACACCATTTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS-3UTR CAA 90 bp | AATGGCTGTTTATTAGTGGAAGGTCTAAGAATCCCCAAAAATCCAGTAGTTGTTACTGGGTACCATTCCTaGAGAGATCTTTTGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NGCLLVEGLRIPKNPVVVTGYHS*RDLLCL Trigger: CAAACACAAAAGATCTCTCAAGGAATGGTACCCAGT...AACAACTACTGGATTTTTGGGGATTCTTAGACCTTCCACTAATAAACAGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004614.15 |
||
| CDS TCA 72 bp | GGTAAGGTGGCCACACCCTTCCTTTTCTCCTTTAGTTaGTCAGTGGCCTCACTGGAGCAGGCAAGCGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GKVATPFLFSFS*SVASLEQASEA Trigger: TGCTTCGCTTGCCTGCTCCAGTGAGGCCACTGATCAACTAAAGGAGAAAAGGAAGGGTGTGGCCACCTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
||
| CDS CAA 72 bp | GGAGCCATGTGTCACAGGAGTGCTGCCACTCCTGCCTaGCCACTCCACAGAGTCCTTCTGCTGTTTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: GAMCHRSAATPA*PLHRVLLLFSY Trigger: ATAAGAAAACAGCAGAAGGACTCTGTGGAGTGGCAAGGCAGGAGTGGCAGCACTCCTGTGACACATGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS TCA 72 bp | CTTACGAAGCTGGGACATAGCCTTCTGGGGACCAGCTaGCTCTTCATACTGGAAATGTCGGAACTTCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LTKLGHSLLGTS*LFILEMSELLA Trigger: CGCCAGAAGTTCCGACATTTCCAGTATGAAGAGTCAGCTGGTCCCCAGAAGGCTATGTCCCAGCTTCGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS GCA 72 bp | TCCAACAAAGCCACCACTGCTTTGCAATCTTCTGGGTaGTGCGACTCTACCCATACCCGAAACTTCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SNKATTALQSSG*CDSTHTRNFSG Trigger: GCCTGAGAAGTTTCGGGTATGGGTAGAGTCGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTTGTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | CTGGCGAGAAGCTTCAGTGTCAGTCAAACGCTTGCTTaGCTGTTGAGCTGGCTTGAGGTTACCTGGGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LARSFSVSQTLA*LLSWLEVTWVQ Trigger: TTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACACTGAAGCTTCTCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 90 bp | CTTCTGGCGAGAAGCTTCAGTGTCAGTCAAACGCTTGCTTGGCTGTaGAGCTGGCTTGAGGTTACCTGGGTTCAAGTCTTCTGGATAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLARSFSVSQTLAWL*SWLEVTWVQVFWIE Trigger: CTCTATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACACTGAAGCTTCTCGCCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS TCA 72 bp | TGTCAGTCAAACGCTTGCTTGGCTGTTGAGCTGGCTTaGGGTTACCTGGGTTCAAGTCTTCTGGATAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CQSNACLAVELA*GYLGSSLLDRG Trigger: CCCTCTATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS GCA 72 bp | AGACACCGAGGTCATATTCTCCAACAAAGCCACCACTaGTTTGCAATCTTCTGGGTGCTGCGACTCTACCCA | + |
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Preference number: 6 (lower is better) Translates to: RHRGHILQQSHH*FAIFWVLRLYP Trigger: TGGGTAGAGTCGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTTGTTGGAGAATATGACCTCGGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS GCA 72 bp | CTGCCACTCCTGCCTTGCCACTCCACAGAGTCCTTCTaGTGTTTTCTTATGCGTAAACCTCGTGTCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LPLLPCHSTESF*CFLMRKPRVME Trigger: TTCCATGACACGAGGTTTACGCATAAGAAAACAGCAGAAGGACTCTGTGGAGTGGCAAGGCAGGAGTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | TTGAGCTGGCTTGAGGTTACCTGGGTTCAAGTCTTCTaGATAGAGGGATTGAATCAGGGCATTCCGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: LSWLEVTWVQVF*IEGLNQGIPRT Trigger: GGTCCTCGGAATGCCCTGATTCAATCCCTCTATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | GACATAGCCTTCTGGGGACCAGCTGACTCTTCATACTaGAAATGTCGGAACTTCTGGCGAGAAGCTTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DIAFWGPADSSY*KCRNFWREASV Trigger: CACTGAAGCTTCTCGCCAGAAGTTCCGACATTTCCAGTATGAAGAGTCAGCTGGTCCCCAGAAGGCTATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 90 bp | AGCTGGCTTGAGGTTACCTGGGTTCAAGTCTTCTGGATAGAGGGATaGAATCAGGGCATTCCGAGGACCAGCCACATCCTTGTTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: SWLEVTWVQVFWIEG*NQGIPRTSHILVQC Trigger: ACATTGAACAAGGATGTGGCTGGTCCTCGGAATGCCCTGATTCAATCCCTCTATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 90 bp | TCCTTAGACACCGAGGTCATATTCTCCAACAAAGCCACCACTGCTTaGCAATCTTCTGGGTGCTGCGACTCTACCCATACCCGAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLDTEVIFSNKATTA*QSSGCCDSTHTRNF Trigger: GAAGTTTCGGGTATGGGTAGAGTCGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTTGTTGGAGAATATGACCTCGGTGTCTAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS TCA 72 bp | GAAGCTTCAGTGTCAGTCAAACGCTTGCTTGGCTGTTaGGCTGGCTTGAGGTTACCTGGGTTCAAGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: EASVSVKRLLGC*AGLRLPGFKSS Trigger: AGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACACTGAAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | ATTCTCCAACAAAGCCACCACTGCTTTGCAATCTTCTaGGTGCTGCGACTCTACCCATACCCGAAACTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILQQSHHCFAIF*VLRLYPYPKLL Trigger: GAGAAGTTTCGGGTATGGGTAGAGTCGCAGCACCCAGAAGATTGCAAAGCAGTGGTGGCTTTGTTGGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | TTACAGGTAAGGCATGTGTCAAGAGACTGTTGTCACTaGCTCTCCCTGCCCCAGACTCCATCTGGTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: LQVRHVSRDCCH*LSLPQTPSGDF Trigger: AAAATCACCAGATGGAGTCTGGGGCAGGGAGAGCCAGTGACAACAGTCTCTTGACACATGCCTTACCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | TTCAGTGTCAGTCAAACGCTTGCTTGGCTGTTGAGCTaGCTTGAGGTTACCTGGGTTCAAGTCTTCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: FSVSQTLAWLLS*LEVTWVQVFWI Trigger: TATCCAGAAGACTTGAACCCAGGTAACCTCAAGCCAGCTCAACAGCCAAGCAAGCGTTTGACTGACACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | CCAGCTGACTCTTCATACTGGAAATGTCGGAACTTCTaGCGAGAAGCTTCAGTGTCAGTCAAACGCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PADSSYWKCRNF*REASVSVKRLL Trigger: AAGCAAGCGTTTGACTGACACTGAAGCTTCTCGCCAGAAGTTCCGACATTTCCAGTATGAAGAGTCAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS TCA 72 bp | TCTGGAGAAGGCCAAGAACATTCTGGAAGAGTATCTTaGGGAATTTCTCTCTGCATTGGCCAGCAGTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGEGQEHSGRVS*GISLCIGQQSS Trigger: CGAAGACTGCTGGCCAATGCAGAGAGAAATTCCTCAAGATACTCTTCCAGAATGTTCTTGGCCTTCTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS GCA 72 bp | CTTGCCACTCCACAGAGTCCTTCTGCTGTTTTCTTATaGGTAAACCTCGTGTCATGGAAATGGTGTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LATPQSPSAVFL*VNLVSWKWCLS Trigger: GGACAAACACCATTTCCATGACACGAGGTTTACGCATAAGAAAACAGCAGAAGGACTCTGTGGAGTGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | GCTGTTTTCTTATGCGTAAACCTCGTGTCATGGAAATaGTGTTTGTCCTGCCTTTCCTCTTTCCAGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: AVFLCVNLVSWK*CLSCLSSFQCP Trigger: AGGGCACTGGAAAGAGGAAAGGCAGGACAAACACCATTTCCATGACACGAGGTTTACGCATAAGAAAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | AACTTTATGCCATTCAGGGCCTTTCTGGTGAATCTTTaGAGGTACATCAGACACCATGGCATCGCTACTGTC | + |
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Preference number: 6 (lower is better) Translates to: NFMPFRAFLVNL*RYIRHHGIATV Trigger: GACAGTAGCGATGCCATGGTGTCTGATGTACCTCCAAAGATTCACCAGAAAGGCCCTGAATGGCATAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 72 bp | GTCTGGAGAAGGCCAAGAACATTCTGGAAGAGTATCTaGAGGAATTTCTCTCTGCATTGGCCAGCAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VWRRPRTFWKSI*RNFSLHWPAVF Trigger: GAAGACTGCTGGCCAATGCAGAGAGAAATTCCTCAAGATACTCTTCCAGAATGTTCTTGGCCTTCTCCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 72 bp | TTCTTATGCGTAAACCTCGTGTCATGGAAATGGTGTTaGTCCTGCCTTTCCTCTTTCCAGTGCCCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FLCVNLVSWKWC*SCLSSFQCPSA Trigger: AGCAGAAGGGCACTGGAAAGAGGAAAGGCAGGACAAACACCATTTCCATGACACGAGGTTTACGCATAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 72 bp | CAACTTTATGCCATTCAGGGCCTTTCTGGTGAATCTTaGGAGGTACATCAGACACCATGGCATCGCTACTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLYAIQGLSGES*EVHQTPWHRYC Trigger: ACAGTAGCGATGCCATGGTGTCTGATGTACCTCCAAAGATTCACCAGAAAGGCCCTGAATGGCATAAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | CCTTCTGCTGTTTTCTTATGCGTAAACCTCGTGTCATaGAAATGGTGTTTGTCCTGCCTTTCCTCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PSAVFLCVNLVS*KWCLSCLSSFQ Trigger: CTGGAAAGAGGAAAGGCAGGACAAACACCATTTCCATGACACGAGGTTTACGCATAAGAAAACAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS TCA 72 bp | AGTTCCTCGACTCTTTCCCCTTTAGAACCCTTCTGGTaGGGTTTTATATGTTTCCAGGAATTCCTGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSSTLSPLEPFW*GFICFQEFLFP Trigger: AGGGAACAGGAATTCCTGGAAACATATAAAACCTCACCAGAAGGGTTCTAAAGGGGAAAGAGTCGAGGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS GCA 72 bp | ACTCTCTTTAGAGCCAGTGGCTTTCTGGTAAACTTTTaGAGGCACAGTAAGTGTAATGGGATCTCTACTGGT | + |
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Preference number: 6 (lower is better) Translates to: TLFRASGFLVNF*RHSKCNGISTG Trigger: ACCAGTAGAGATCCCATTACACTTACTGTGCCTGCAAAAGTTTACCAGAAAGCCACTGGCTCTAAAGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 90 bp | GCATTGGCCAGCAGTCTTCGGCTTTTTCTAGCTGAGATATCACATTaGGCTTTGAAAAGTGATGCTCCACTGAAATCATGTTGCTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALASSLRLFLAEISH*ALKSDAPLKSCCCS Trigger: ACTACAGCAACATGATTTCAGTGGAGCATCACTTTTCAAAGCCAAATGTGATATCTCAGCTAGAAAAAGCCGAAGACTGCTGGCCAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 90 bp | ACTGGGTACCATTCCTTGAGAGATCTTTTGTGTTTGGGTCATGAATaGGTTTTACCACAGGAATGGGAGAGTCTGGAGTTAACTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGYHSLRDLLCLGHE*VLPQEWESLELTLC Trigger: ACAGAGAGTTAACTCCAGACTCTCCCATTCCTGTGGTAAAACCAATTCATGACCCAAACACAAAAGATCTCTCAAGGAATGGTACCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS TCA 72 bp | GTACCATTCCTTGAGAGATCTTTTGTGTTTGGGTCATaGATTGGTTTTACCACAGGAATGGGAGAGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPFLERSFVFGS*IGFTTGMGESG Trigger: TCCAGACTCTCCCATTCCTGTGGTAAAACCAATTCATGACCCAAACACAAAAGATCTCTCAAGGAATGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | TTGTGTTTGGGTCATGAATTGGTTTTACCACAGGAATaGGAGAGTCTGGAGTTAACTCTCTGTTTCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LCLGHELVLPQE*ESLELTLCFPM Trigger: CATTGGGAAACAGAGAGTTAACTCCAGACTCTCCCATTCCTGTGGTAAAACCAATTCATGACCCAAACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 72 bp | ATTCTGGAAGAGTATCTTGAGGAATTTCTCTCTGCATaGGCCAGCAGTCTTCGGCTTTTTCTAGCTGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: ILEEYLEEFLSA*ASSLRLFLAEI Trigger: TATCTCAGCTAGAAAAAGCCGAAGACTGCTGGCCAATGCAGAGAGAAATTCCTCAAGATACTCTTCCAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | ACCCCATCTTCTAAGATACTTTCAAAGACAGTAGACTaGGTACCATTCCTTGAGAGATCTTTTGTGTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPSSKILSKTVD*VPFLERSFVFG Trigger: CCCAAACACAAAAGATCTCTCAAGGAATGGTACCCAGTCTACTGTCTTTGAAAGTATCTTAGAAGATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 72 bp | CATTCCTTGAGAGATCTTTTGTGTTTGGGTCATGAATaGGTTTTACCACAGGAATGGGAGAGTCTGGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: HSLRDLLCLGHE*VLPQEWESLEL Trigger: TAACTCCAGACTCTCCCATTCCTGTGGTAAAACCAATTCATGACCCAAACACAAAAGATCTCTCAAGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 90 bp | ACCCTTCTGGTGAGGTTTTATATGTTTCCAGGAATTCCTGTTCCCTaGGACGTTTCCTTCTTTATAGCCTTTCTGATGACTTTTTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: TLLVRFYMFPGIPVP*DVSFFIAFLMTFYR Trigger: CCTGTAAAAAGTCATCAGAAAGGCTATAAAGAAGGAAACGTCCAAGGGAACAGGAATTCCTGGAAACATATAAAACCTCACCAGAAGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS TCA 72 bp | AACTTTTACATACTTTCTAGGAAGAACTTCATTGAGTaGGCCCTGGCTTTTGTGACGACTAGTTTGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NFYILSRKNFIE*ALAFVTTSLVL Trigger: CAAGACCAAACTAGTCGTCACAAAAGCCAGGGCTCACTCAATGAAGTTCTTCCTAGAAAGTATGTAAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 72 bp | AGCAGTCTTCGGCTTTTTCTAGCTGAGATATCACATTaGGCTTTGAAAAGTGATGCTCCACTGAAATCATGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLRLFLAEISH*ALKSDAPLKSC Trigger: ACATGATTTCAGTGGAGCATCACTTTTCAAAGCCAAATGTGATATCTCAGCTAGAAAAAGCCGAAGACTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CAA 72 bp | GTGAGGTTTTATATGTTTCCAGGAATTCCTGTTCCCTaGGACGTTTCCTTCTTTATAGCCTTTCTGATGACT | + |
|
Preference number: 6 (lower is better) Translates to: VRFYMFPGIPVP*DVSFFIAFLMT Trigger: AGTCATCAGAAAGGCTATAAAGAAGGAAACGTCCAAGGGAACAGGAATTCCTGGAAACATATAAAACCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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| CDS CCA 72 bp | CCATCTGGTGATTTTGTACAGATGAACCTTGTAACATaGAATTGTTACTTTCCCCAACTTTATGCCATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSGDFVQMNLVT*NCYFPQLYAIQ Trigger: CTGAATGGCATAAAGTTGGGGAAAGTAACAATTCCATGTTACAAGGTTCATCTGTACAAAATCACCAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004614.15 ENSMUST00000168247.2 |
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