Pregenerated sensors for ZFP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051034Ensembl transcript IDs: ENSMUST00000049778.7
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACTCCTTACACCTGTATCGTCTCCCCTCATAGATGGGCCTTTTTaGTGCAAATGGAAGGTTCAGCAGTTGTTAAAGACACTAAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: RLLTPVSSPLIDGPF*CKWKVQQLLKTLSA Trigger: TGCACTTAGTGTCTTTAACAACTGCTGAACCTTCCATTTGCACCAAAAAGGCCCATCTATGAGGGGAGACGATACAGGTGTAAGGAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR CAA 90 bp | CTGAAGACAGCTACAGTGTACTTATGTATAATAATAAATAAACCTTaGGGCCAGAGCGAGCAGAGACCGAGGGAGCAGGGCCAACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKTATVYLCIIINKP*GQSEQRPREQGQPE Trigger: CTCTGGTTGGCCCTGCTCCCTCGGTCTCTGCTCGCTCTGGCCCAAAGGTTTATTTATTATTATACATAAGTACACTGTAGCTGTCTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR GCA 90 bp | CAACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTGTACTCACATAGATGGGCCTTTTTGGTaGAAATGGAAGGTTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QQPHEGSQPSVQLQCTHIDGPFW*KWKVQQ Trigger: CTGCTGAACCTTCCATTTGCACCAAAAAGGCCCATC...TATGTGAGTACACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACCCTTTTTGGTGCAAATaGAAGGTTCAGCAGTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: IRALTVLPKVLCSNPSNHPFWCK*KVQQLL Trigger: TAACAACTGCTGAACCTTCCATTTGCACCAAAAAGG...GTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR TCA 90 bp | GGATTTTACGTCACAGTCAACACAAACGAATACCAACAATTCGGTGTTCATTGTGGATTATTTTTCTGCTaGGATGGCCTGAGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GFYVTVNTNEYQQFGVHCGLFFC*DGLRAE Trigger: CTCAGCCCTCAGGCCATCTCAGCAGAAAAATAATCC...ACAATGAACACCGAATTGTTGGTATTCGTTTGTGTTGACTGTGACGTAAAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR CCA 90 bp | CCCACGAGCAGAGAGAACTTTTGTACTTTCACTCCTAAGGTTTGCCATGGGATTAACAGTTTTCAACTATaGGATGTTCAGTACACACTC | + |
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Preference number: 2 (lower is better) Translates to: PTSRENFCTFTPKVCHGINSFQL*DVQYTL Trigger: GAGTGTGTACTGAACATCCCATAGTTGAAAACTGTT...AATCCCATGGCAAACCTTAGGAGTGAAAGTACAAAAGTTCTCTCTGCTCGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTGTGGTGTGTCTGAAGACAGCTACAGTGTACTTATGTATAATAATAAATTTCCCAACAACCACATaGAGGCTCACAACCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: PLVVCLKTATVYLCIIINFPTTT*RLTTIC Trigger: ACAGATGGTTGTGAGCCTTCATGTGGTTGTTGGGAA...ATTTATTATTATACATAAGTACACTGTAGCTGTCTTCAGACACACCACAAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR TCA 90 bp | GGATTTTACGTCACAGTCAACACAAACGAATACCAACAATTCGGTGTTCATTGTACCAGAGATAACAAGTaGAGAACCATTCACTCCATG | + |
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Preference number: 2 (lower is better) Translates to: GFYVTVNTNEYQQFGVHCTRDNK*RTIHSM Trigger: CATGGAGTGAATGGTTCTTCACTTGTTATCTCTGGT...ACAATGAACACCGAATTGTTGGTATTCGTTTGTGTTGACTGTGACGTAAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR CCA 72 bp | TCGTCTCCCCTCATAGATGGGCCTTTTTGGTGCAAATaGAAGGTTCAGCAGTTGTTAAAGACACTAAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SSPLIDGPFWCK*KVQQLLKTLSA Trigger: TGCACTTAGTGTCTTTAACAACTGCTGAACCTTCCATTTGCACCAAAAAGGCCCATCTATGAGGGGAGACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR CCA 72 bp | ACACCTGTATCGTCTCCCCTCATAGATGGGCCTTTTTaGTGCAAATGGAAGGTTCAGCAGTTGTTAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: TPVSSPLIDGPF*CKWKVQQLLKT Trigger: TGTCTTTAACAACTGCTGAACCTTCCATTTGCACCAAAAAGGCCCATCTATGAGGGGAGACGATACAGGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR CAA 90 bp | AAGAACGGTTTAAAACTTCTCAGAAAGCAGGATTATTTTTCTGCTGAGATGGCCCACGACTTAAAGGTCTaGCCAGACTCCTTACACCTG | + |
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Preference number: 3 (lower is better) Translates to: KNGLKLLRKQDYFSAEMAHDLKV*PDSLHL Trigger: CAGGTGTAAGGAGTCTGGCAAGACCTTTAAGTCGTG...GGCCATCTCAGCAGAAAAATAATCCTGCTTTCTGAGAAGTTTTAAACCGTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR CAA 90 bp | AAGAACGGTTTAAAACTTCTCAGAAAGCAGGATTATTTTTCTGCTGAGATGGCCTGGAAGGTTCAGCAGTaGTTAAAGACACTAAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: KNGLKLLRKQDYFSAEMAWKVQQ*LKTLSA Trigger: TGCACTTAGTGTCTTTAACAACTGCTGAACCTTCCA...GGCCATCTCAGCAGAAAAATAATCCTGCTTTCTGAGAAGTTTTAAACCGTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR TCA 72 bp | CTGAGGGTTAGACATAGGACAATACTCTTCCCAATATaGATTTGCTACTGTCCAATAAAGAAGAGCAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: LRVRHRTILFPI*ICYCPIKKSSD Trigger: ATCACTGCTCTTCTTTATTGGACAGTAGCAAATTCATATTGGGAAGAGTATTGTCCTATGTCTAACCCTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR-3UTR CAA 90 bp | AAGAACGGTTTAAAACTTCTCAGAAAGCAGGATTATTTTTCTGCTGAGATGGCCCTTCCTAGTAAGGCTTaGCTTATTATACACATACAC | + |
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Preference number: 3 (lower is better) Translates to: KNGLKLLRKQDYFSAEMALPSKA*LIIHIH Trigger: GTGTATGTGTATAATAAGCAAAGCCTTACTAGGAAG...GGCCATCTCAGCAGAAAAATAATCCTGCTTTCTGAGAAGTTTTAAACCGTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | GGCTGGGCCTGGGGGTGCATGTCTTTAGTCCCAGTGCTCTGGACACAGAGGCAGGGTTTCTACTTCTCTTaGAAGCTTTGCCGCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: GWAWGCMSLVPVLWTQRQGFYFS*KLCRTL Trigger: AAGAGTGCGGCAAAGCTTTCAAGAGAAGTAGAAACC...CTGCCTCTGTGTCCAGAGCACTGGGACTAAAGACATGCACCCCCAGGCCCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | AGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACATGGCTGGGAGGAGAGCCTaGAGGGCTTGCCACACTCTC | + |
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Preference number: 4 (lower is better) Translates to: RALTVLPKVLCSNPSNHMAGRRA*RACHTL Trigger: GAGAGTGTGGCAAGCCCTTCAGGCTCTCCTCCCAGC...CATGTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | ATAAGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACGGCTTGGCGCCGGTATaGAGTATCTGGTGGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: IRALTVLPKVLCSNPSNHGLAPV*SIWWRV Trigger: CACCCGCCACCAGATACTTCATACCGGCGCCAAGCC...GTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | CCCACGAGCAGAGAGAACTTTTGTACTTTCACTCCTAAGGTTTGCCATGGGATTTGTGTCACCTGGTGCTaGGCGAGGTTTCTACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PTSRENFCTFTPKVCHGICVTWC*ARFLLL Trigger: GAGAAGTAGAAACCTCGCTCAGCACCAGGTGACACA...AATCCCATGGCAAACCTTAGGAGTGAAAGTACAAAAGTTCTCTCTGCTCGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CCA 90 bp | CCCACGAGCAGAGAGAACTTTTGTACTTTCACTCCTAAGGTTTGCCATGGGATTCCGCTGTGGATTCTCTaGTGTCGGATAAGCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: PTSRENFCTFTPKVCHGIPLWIL*CRISCE Trigger: TTCACAGCTTATCCGACACCAGAGAATCCACAGCGG...AATCCCATGGCAAACCTTAGGAGTGAAAGTACAAAAGTTCTCTCTGCTCGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CCA 90 bp | ATAAGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACCCAGCATGGATCCTCTaGTGTTTAGTCAGGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: IRALTVLPKVLCSNPSNHPAWIL*CLVRYE Trigger: CTCATACCTGACTAAACACCAGAGGATCCATGCTGG...GTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | ATAAGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACGTGTCGGATAAGCTGTaGAGAACACTTGAACGGTTT | + |
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Preference number: 4 (lower is better) Translates to: IRALTVLPKVLCSNPSNHVSDKL*RTLERF Trigger: AAACCGTTCAAGTGTTCTTCACAGCTTATCCGACAC...GTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CCA 90 bp | GGATTTTACGTCACAGTCAACACAAACGAATACCAACAATTCGGTGTTCATTGTTGGTGTCGGATAAGCTaGGAGGAGAGCCTGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GFYVTVNTNEYQQFGVHCWCRIS*EESLKG Trigger: GCCCTTCAGGCTCTCCTCCCAGCTTATCCGACACCA...ACAATGAACACCGAATTGTTGGTATTCGTTTGTGTTGACTGTGACGTAAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR CAA 72 bp | GCTACAGTGTACTTATGTATAATAATAAATAAACCTTaGGGCCAGAGCGAGCAGAGACCGAGGGAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ATVYLCIIINKP*GQSEQRPREQG Trigger: GCCCTGCTCCCTCGGTCTCTGCTCGCTCTGGCCCAAAGGTTTATTTATTATTATACATAAGTACACTGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CCA 90 bp | ATAAGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACGGAATCTCTTCAAAGTaGATCTTCATATGCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: IRALTVLPKVLCSNPSNHGISSK*IFICWI Trigger: GATCCAGCATATGAAGATCCACTTTGAAGAGATTCC...GTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR GCA 90 bp | CCTCTTGTGGTGTGTCTGAAGACAGCTACAGTGTACTTATGTATAATAATAAATGTGTGGATTATCTGGTaGCGGGTGAGGGTGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: PLVVCLKTATVYLCIIINVWIIW*RVRVEL Trigger: CAGTTCCACCCTCACCCGGCACCAGATAATCCACAC...ATTTATTATTATACATAAGTACACTGTAGCTGTCTTCAGACACACCACAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR GCA 90 bp | GGATTTTACGTCACAGTCAACACAAACGAATACCAACAATTCGGTGTTCATTGTAGTAAGGACAGAAAGTaGAGAAAAGGCTCTGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GFYVTVNTNEYQQFGVHCSKDRK*RKGSAA Trigger: TGCGGCAGAGCCTTTTCTGCACTTTCTGTCCTTACT...ACAATGAACACCGAATTGTTGGTATTCGTTTGTGTTGACTGTGACGTAAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CCA 90 bp | CCTCTTGTGGTGTGTCTGAAGACAGCTACAGTGTACTTATGTATAATAATAAATCCTGTGTGGATTATCTaGTGCCGACTGAGGGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: PLVVCLKTATVYLCIIINPVWII*CRLRVE Trigger: TTCGACCCTCAGTCGGCACCAGATAATCCACACAGG...ATTTATTATTATACATAAGTACACTGTAGCTGTCTTCAGACACACCACAAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | AAAACAAATTCCATCCTTTCAAAGATGAGTTCAAATCACTCTGACACCTGTGATATGTCGGTTCAGCTGTaGGGAGAAGCAGTAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KTNSILSKMSSNHSDTCDMSVQL*GEAVGF Trigger: AAAGCCTACTGCTTCTCCTCACAGCTGAACCGACAT...ATCACAGGTGTCAGAGTGATTTGAACTCATCTTTGAAAGGATGGAATTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR GCA 90 bp | AAGAACGGTTTAAAACTTCTCAGAAAGCAGGATTATTTTTCTGCTGAGATGGCCAGAAGCAGTAGGCTTTaGCACACTCTGTGCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: KNGLKLLRKQDYFSAEMARSSRL*HTLCIC Trigger: ACAAATGCACAGAGTGTGGCAAAGCCTACTGCTTCT...GGCCATCTCAGCAGAAAAATAATCCTGCTTTCTGAGAAGTTTTAAACCGTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CCA 90 bp | AAGAACGGTTTAAAACTTCTCAGAAAGCAGGATTATTTTTCTGCTGAGATGGCCTGGATCTTCATATGCTaGATCAAGAAGGAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KNGLKLLRKQDYFSAEMAWIFIC*IKKEEQ Trigger: CTGCTCCTCCTTCTTGATCCAGCATATGAAGATCCA...GGCCATCTCAGCAGAAAAATAATCCTGCTTTCTGAGAAGTTTTAAACCGTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | GGATTTTACGTCACAGTCAACACAAACGAATACCAACAATTCGGTGTTCATTGTGTGCTTAGTAAGGTATaGAGAACAATTGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GFYVTVNTNEYQQFGVHCVLSKV*RTIEGL Trigger: AAGGCCTTCAATTGTTCTTCATACCTTACTAAGCAC...ACAATGAACACCGAATTGTTGGTATTCGTTTGTGTTGACTGTGACGTAAAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CCA 90 bp | AAAACAAATTCCATCCTTTCAAAGATGAGTTCAAATCACTCTGACACCTGTGATCTCTTCACACTTGTGTaGTTTCTCCCTCTTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KTNSILSKMSSNHSDTCDLFTLV*FLPLVC Trigger: ACACACAAGAGGGAGAAACCACACAAGTGTGAAGAG...ATCACAGGTGTCAGAGTGATTTGAACTCATCTTTGAAAGGATGGAATTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | AAAACAAATTCCATCCTTTCAAAGATGAGTTCAAATCACTCTGACACCTGTGATGTGCTTAGTAAGGTATaGAGTACAGTTGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KTNSILSKMSSNHSDTCDVLSKV*STVEGL Trigger: AAGGCCTTCAACTGTACTTCATACCTTACTAAGCAC...ATCACAGGTGTCAGAGTGATTTGAACTCATCTTTGAAAGGATGGAATTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| 3UTR CAA 72 bp | TACATATTTGTAAGATTTCTGCCCAACGATAATTTTTaGTATACACCAAGTTTTGAGGTATGGGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: YIFVRFLPNDNF*YTPSFEVWAGP Trigger: AGGCCCAGCCCATACCTCAAAACTTGGTGTATACAAAAAATTATCGTTGGGCAGAAATCTTACAAATATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR TCA 90 bp | AAAACAAATTCCATCCTTTCAAAGATGAGTTCAAATCACTCTGACACCTGTGATGTAAGTTCTGGGTGTTaGTCAAAGTCTTTTACAGAG | + |
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Preference number: 4 (lower is better) Translates to: KTNSILSKMSSNHSDTCDVSSGC*SKSFTE Trigger: CTCTGTAAAAGACTTTGATCAACACCCAGAACTTAC...ATCACAGGTGTCAGAGTGATTTGAACTCATCTTTGAAAGGATGGAATTTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | GGCTGGGCCTGGGGGTGCATGTCTTTAGTCCCAGTGCTCTGGACACAGAGGCAGGAACAATTGAAGGCCTaGCCACACTCCTGGCACACA | + |
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Preference number: 5 (lower is better) Translates to: GWAWGCMSLVPVLWTQRQEQLKA*PHSWHT Trigger: TGTGTGCCAGGAGTGTGGCAAGGCCTTCAATTGTTC...CTGCCTCTGTGTCCAGAGCACTGGGACTAAAGACATGCACCCCCAGGCCCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | AGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACATGGTGAATGATGCGGTGTaGGTAGAGGACCGAGCGGTA | + |
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Preference number: 5 (lower is better) Translates to: RALTVLPKVLCSNPSNHMVNDAV*VEDRAV Trigger: TACCGCTCGGTCCTCTACCAACACCGCATCATTCAC...CATGTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | AGAGCACTGACTGTTCTTCCGAAGGTCCTGTGTTCAAATCCCAGCAACCACATGCTGTTATTGAAGGCCTaGTCGCACTCTGGGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: RALTVLPKVLCSNPSNHMLLLKA*SHSGHL Trigger: CAAATGCCCAGAGTGCGACAAGGCCTTCAATAACAG...CATGTGGTTGCTGGGATTTGAACACAGGACCTTCGGAAGAACAGTCAGTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | CAACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTGTACTCACATACTGTTATTGAAGGCCTaGCCGCACTCTGGGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: QQPHEGSQPSVQLQCTHILLLKA*PHSGHL Trigger: CAAATGCCCAGAGTGCGGCAAGGCCTTCAATAACAG...TATGTGAGTACACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | CCCACGAGCAGAGAGAACTTTTGTACTTTCACTCCTAAGGTTTGCCATGGGATTCCACACTCTGTGCATTaGTATAGCCTGTCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PTSRENFCTFTPKVCHGIPHSVH*YSLSPA Trigger: TGCTGGAGACAGGCTATACAAATGCACAGAGTGTGG...AATCCCATGGCAAACCTTAGGAGTGAAAGTACAAAAGTTCTCTCTGCTCGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | CAACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTGTACTCACATAATGAATTACCTGGTGTaGACTGAGCGTGTGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: QQPHEGSQPSVQLQCTHIMNYLV*TERVAP Trigger: AGGAGCCACACGCTCAGTCAACACCAGGTAATTCAT...TATGTGAGTACACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | CAACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTGTACTCACATAAGGTTTCTACTTCTCTaGAAAGCTTTGCCGCACTCT | + |
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Preference number: 5 (lower is better) Translates to: QQPHEGSQPSVQLQCTHIRFLLL*KALPHS Trigger: AGAGTGCGGCAAAGCTTTCAAGAGAAGTAGAAACCT...TATGTGAGTACACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | CAACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTGTACTCACATAGGTAAGTTCTGGGTGTaGATCAAAGTCTTTTACAGA | + |
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Preference number: 5 (lower is better) Translates to: QQPHEGSQPSVQLQCTHIGKFWV*IKVFYR Trigger: TCTGTAAAAGACTTTGATCAACACCCAGAACTTACC...TATGTGAGTACACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | CCTCTTGTGGTGTGTCTGAAGACAGCTACAGTGTACTTATGTATAATAATAAATAGGTATGAAGTACAGTaGAAGGCCTTGCCGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: PLVVCLKTATVYLCIIINRYEVQ*KALPHS Trigger: GGAGTGCGGCAAGGCCTTCAACTGTACTTCATACCT...ATTTATTATTATACATAAGTACACTGTAGCTGTCTTCAGACACACCACAAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS-3UTR CAA 90 bp | CCTCTTGTGGTGTGTCTGAAGACAGCTACAGTGTACTTATGTATAATAATAAATTCACATTCTTCCTGCTaGTACGGCTTCTCTCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PLVVCLKTATVYLCIIINSHSSC*YGFSLC Trigger: GCACAGAGAGAAGCCGTACAAGCAGGAAGAATGTGA...ATTTATTATTATACATAAGTACACTGTAGCTGTCTTCAGACACACCACAAGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS TCA 72 bp | GGCGCCGGTGTGAACAATGTGGTGTCGGGTAAGGGTTaGTTGATACCTGAACGCTTTCCCGCACTCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GAGVNNVVSGKG*LIPERFPALSA Trigger: TGCAGAGAGTGCGGGAAAGCGTTCAGGTATCAATCAACCCTTACCCGACACCACATTGTTCACACCGGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS CAA 72 bp | TTTGTAGGGTCTTGCGGCCGTGTGAATGATGCGGTGTaGGTAGAGGACCGAGCGGTATTTAAAGGCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FVGSCGRVNDAV*VEDRAVFKGFP Trigger: GGGAAAGCCTTTAAATACCGCTCGGTCCTCTACCAACACCGCATCATTCACACGGCCGCAAGACCCTACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS TCA 72 bp | GCCTCCTTTATGCACCCTGAGATGCTGATCGCAAGCTaGGTCATCACATTCTTCCTGCTTGTACGGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ASFMHPEMLIAS*VITFFLLVRLL Trigger: GAGAAGCCGTACAAGCAGGAAGAATGTGATGACTCAGCTTGCGATCAGCATCTCAGGGTGCATAAAGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS TCA 72 bp | CTTTGCATTCATAGGGCATGCCTCCTTTATGCACCCTaGGATGCTGATCGCAAGCTGAGTCATCACATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LCIHRACLLYAP*DADRKLSHHIL Trigger: AAGAATGTGATGACTCAGCTTGCGATCAGCATCTCAGGGTGCATAAAGGAGGCATGCCCTATGAATGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS CAA 90 bp | CGGCTTCTCTCTGTGCACACATTGCCGGATGGTAAGTTCTGGGTGTaGATCAAAGTCTTTTACAGAGTTGTTACAGTCAGAAAGATTCTC | + |
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Preference number: 6 (lower is better) Translates to: RLLSVHTLPDGKFWV*IKVFYRVVTVRKIL Trigger: GAGAATCTTTCTGACTGTAACAACTCTGTAAAAGACTTTGATCAACACCCAGAACTTACCATCCGGCAATGTGTGCACAGAGAGAAGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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| CDS CAA 72 bp | TCTGTGCACACATTGCCGGATGGTAAGTTCTGGGTGTaGATCAAAGTCTTTTACAGAGTTGTTACAGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SVHTLPDGKFWV*IKVFYRVVTVR Trigger: TCTGACTGTAACAACTCTGTAAAAGACTTTGATCAACACCCAGAACTTACCATCCGGCAATGTGTGCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049778.7 |
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