Pregenerated sensors for ZFP108 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030486Ensembl transcript IDs: ENSMUST00000072713.7, ENSMUST00000205982.2, ENSMUST00000206777.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAGGAGATAGATGTGGTCTCTaGCTGAAGCCCTTACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KKVQSKILSSFFIMSSVGDRCGL*LKPLLQ Trigger: CTGCAGTAAGGGCTTCAGTCAGAGACCACATCTATC...TCCTACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAGATAGATGTGGTCTCTaGCTGAAGCCCTTACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AKKVQSKILSSFFIMSSVDRCGL*LKPLLQ Trigger: CTGCAGTAAGGGCTTCAGTCAGAGACCACATCTATC...TACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGAATCAGTGTTCTTTTTATTATATGGTGGGGAATCGAATTAGTCCTTTGTGGAGTCCACCTGAGTaGAGAACAAACCTAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: FRNQCSFYYMVGNRISPLWSPPE*RTNLGF Trigger: AAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA...CAAAGGACTAATTCGATTCCCCACCATATAATAAAAAGAACACTGATTCCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAGGATGGAGTCCACCTGAGTaGAGAACAAACCTAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: KKVQSKILSSFFIMSSVGWSPPE*RTNLGF Trigger: AAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA...TCCTACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCCGTGCTTTTAGGATGTTTATTGGCAATTTCTTCCATATAGTTGCTATAAGCTCAGTAGGAGAATaGGTTGAGAGCAAAATACCA | + |
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Preference number: 2 (lower is better) Translates to: KSRAFRMFIGNFFHIVAISSVGE*VESKIP Trigger: TGGTATTTTGCTCTCAACTCATTCTCCTACTGAGCT...TATAGCAACTATATGGAAGAAATTGCCAATAAACATCCTAAAAGCACGGGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
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| 3UTR TCA 72 bp | GTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTaGGTGCAGAACAAACCTAGGGTTTCCCTGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: VTLVTTSSVEST*VQNKPRVSLHC Trigger: ACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCGACCGGACCTCTGGCTaGAGACTTTCCCACACGTGT | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCDRTSG*RLSHTC Trigger: ACACGTGTGGGAAAGTCTTCAGCCAGAGGTCCGGTC...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCTGCTCCCTTGTGGCATaGCTCCAGGAAGTGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCCSLVA*LQEVGT Trigger: GGTTCCCACTTCCTGGAGCCATGCCACAAGGGAGCA...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | GCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGTGCTCCCTTGTGGCATaGCTCCAGGAAGTGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: AAWSPPECRTNLGFPCTVCSLVA*LQEVGT Trigger: GGTTCCCACTTCCTGGAGCCATGCCACAAGGGAGCA...CACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTGAACACTTGGTTGAATaGGGACACTGGGGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WSPPECRTNLGFPCTVGPEHLVE*GHWGSA Trigger: GGCAGAGCCCCAGTGTCCTCATTCAACCAAGTGTTC...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCGCCCCGAGTTCCATCTaGATTCCTTCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCAPSSI*IPSHTP Trigger: AGGAGTGTGGGAAGGAATTCAGATGGAACTCGGGGC...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCATCTTGTTTGGACTCTaGCCTCCCACTGCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCILFGL*PPTARR Trigger: CCTCCTGGCAGTGGGAGGCCAGAGTCCAAACAAGAT...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTACTCTCTGGTGGGTGTaGAGGTTCCAGCTACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: WSPPECRTNLGFPCTVGPTLWWV*RFQLQL Trigger: CAGCTGTAGCTGGAACCTCCACACCCACCAGAGAGT...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCAACTCTGGCCTCCCACTaGCAGGAGGTTCCTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SGFGDTGNNQQRGVHLSATLASH*QEVPEV Trigger: AACTTCAGGAACCTCCTGGCAGTGGGAGGCCAGAGT...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTAGACTTCTTGGCCCTTaGTGCACTGGTAGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: WSPPECRTNLGFPCTVGPRLLGP*CTGRPS Trigger: AGAAGGCCTACCAGTGCAGCAAGGGCCAAGAAGTCT...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | GCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGAGACTTCTTGGCCCTTaGTGCACTGGTAGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AAWSPPECRTNLGFPCTVRLLGP*CTGRPS Trigger: AGAAGGCCTACCAGTGCAGCAAGGGCCAAGAAGTCT...CACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCAGTGTGGACTCTCTGGTaGGTGTGGAGGTTCCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: SGFGDTGNNQQRGVHLSAVWTLW*VWRFQL Trigger: TAGCTGGAACCTCCACACCCACCAGAGAGTCCACAC...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTTTACTCGAAGAGCTTTaGGCGCCCCCAGACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: WSPPECRTNLGFPCTVGPLLEEL*APPDRN Trigger: ATTTCTGTCTGGGGGCGCTCAAAGCTCTTCGAGTAA...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCATGGGATTGATGACTTaGTCACAGTCACCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCMGLMT*SQSPLL Trigger: CAGCAGCGGTGACTGTGATCAAGTCATCAATCCCAT...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | AGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGTGTGTGGAAGTGTaGGGCCTGACTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: SPPECRTNLGFPCTVGPLMCVEV*GLTEAL Trigger: AAGGGCTTCAGTCAGGCCTCACACTTCCACACACAT...TAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTGATCACAGTCACCGCTaGTGGGGACTTTGTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: WSPPECRTNLGFPCTVGPDHSHR*WGLCLF Trigger: AAAGAGACAAAGTCCCCAGCAGCGGTGACTGTGATC...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCCTGTATGGACCCTCTaGTGTCTTTGGAAGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: WSPPECRTNLGFPCTVGPPVWTL*CLWKLE Trigger: CTCAAGCTTCCAAAGACACCAGAGGGTCCATACAGG...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTAGCTTGAGGCTGAACTaGAATCCTTCCCACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: WSPPECRTNLGFPCTVGPSLRLN*NPSHTL Trigger: AAGAGTGTGGGAAGGATTTCAGTTCAGCCTCAAGCT...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATATCATGGCTCGTCATTTaGCAGCATGGAAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PECRTNLGFPCTVGPLMISWLVI*QHGSRS Trigger: GGAGCGGCTTCCATGCTGGCAAATGACGAGCCATGA...TATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | AACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTGGTCTCCCAGGGAGGCTTTTCTaGTCCCTTGTGGCATGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NKPRVSLHCGPSNDRCGLPGRLF*SLVAWL Trigger: GAGCCATGCCACAAGGGAGCAGAAAAGCCTCCCTGG...GAGACCACATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCAACCCTCTGGTGTCTTTaGAAGCTTGAGGCTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SGFGDTGNNQQRGVHLSATLWCL*KLEAEL Trigger: CAGTTCAGCCTCAAGCTTCCAAAGACACCAGAGGGT...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCACCTGTATGGACCCTCTaGTGTCTTTGGAAGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SGFGDTGNNQQRGVHLSAPVWTL*CLWKLE Trigger: CTCAAGCTTCCAAAGACACCAGAGGGTCCATACAGG...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | AACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTGGTCTCGAACACTTGGTTGAATaGGGACACTGGGGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NKPRVSLHCGPSNDRCGLEHLVE*GHWGSA Trigger: GGCAGAGCCCCAGTGTCCTCATTCAACCAAGTGTTC...GAGACCACATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCAAGCTTGAGGCTGAACTaGAATCCTTCCCACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: SGFGDTGNNQQRGVHLSASLRLN*NPSHTL Trigger: AAGAGTGTGGGAAGGATTTCAGTTCAGCCTCAAGCT...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAATGGGCCTGCAGACTTaGGGCATGACTGAAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PECRTNLGFPCTVGPLMIMGLQT*GMTEAF Trigger: AAAGGCTTCAGTCATGCCTCAAGTCTGCAGGCCCAT...TATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCATTCTCTCGTGTATCTaGAGATGGTCCCACTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCILSCI*RWSHFV Trigger: CACAAAGTGGGACCATCTCCAGATACACGAGAGAAT...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCTCTCTCACTAGGATGTaGTTTACTCGAAGAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCSLTRM*FTRRAL Trigger: CAAAGCTCTTCGAGTAAATCACATCCTAGTGAGAGA...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCGCACCTTACTCCCATTaGATGAAGAGTCTCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: QPAAWSPPECRTNLGFPCAPYSH*MKSLYL Trigger: AAGATAGAGACTCTTCATGCAATGGGAGTAAGGTGC...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | GCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGCACCTTACTCCCATTaGATGAAGAGTCTCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: AAWSPPECRTNLGFPCTVAPYSH*MKSLYL Trigger: AAGATAGAGACTCTTCATGCAATGGGAGTAAGGTGC...CACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | AGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAGGACAGTGTTTCCATTaGTCATGTCTCTCACTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPPECRTNLGFPCTVGPLGQCFH*SCLSLG Trigger: TCCTAGTGAGAGACATGACCAATGGAAACACTGTCC...TAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCATTCTGGCTAGTTTGTTaGCATCATGGCTCGTCATTT | + |
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Preference number: 4 (lower is better) Translates to: SGFGDTGNNQQRGVHLSAFWLVC*HHGSSF Trigger: AAATGACGAGCCATGATGTCAACAAACTAGCCAGAA...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | AGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTGGTCTTACTCGAAGAGCTTTaGGCGCCCCCAGACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RTNLGFPCTVGPLMIDVVLLEEL*APPDRN Trigger: ATTTCTGTCTGGGGGCGCTCAAAGCTCTTCGAGTAA...GACCACATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | AGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTGGTCATGGGATTGATGACTTaGTCACAGTCACCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTNLGFPCTVGPLMIDVVMGLMT*SQSPLL Trigger: CAGCAGCGGTGACTGTGATCAAGTCATCAATCCCAT...GACCACATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| 3UTR CAA 72 bp | AATACCAAAATACCATCTCTCCTGAAGCTTCTGGGTTaGGTGACACTGGTAACAACCAGCAGCGTGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: NTKIPSLLKLLG*VTLVTTSSVES Trigger: GGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGAAGCTTCAGGAGAGATGGTATTTTGGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | GTTACCCACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTCCTGTGTGGACCCGCTaGTGGCTGTGGAGGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VTHSETISALVGVTMIFCPVWTR*WLWRLK Trigger: CTTCAACCTCCACAGCCATCAGCGGGTCCACACAGG...ACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | AGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTGGTCTATCTTGATGGGAAATaGAACTCAGCACGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: RTNLGFPCTVGPLMIDVVYLDGK*NSARQH Trigger: GTGCTGACGTGCTGAGTTGCATTTCCCATCAAGATA...GACCACATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATACACATCACATCTGTATaGCTTTTCCCTGGTATGAAC | + |
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Preference number: 4 (lower is better) Translates to: PECRTNLGFPCTVGPLMIHITSV*LFPGMN Trigger: GTTCATACCAGGGAAAAGCCATACAGATGTGATGTG...TATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | GAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATTCTCTCACTAGGATGTaGTTTACTCGAAGAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ECRTNLGFPCTVGPLMIDSLTRM*FTRRAL Trigger: CAAAGCTCTTCGAGTAAATCACATCCTAGTGAGAGA...ATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR GCA 90 bp | AGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTGGTCATCCTCTCTGTGGTGTaGATTTTCAAATGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTNLGFPCTVGPLMIDVVILSVV*IFKCVW Trigger: CCACACACATTTGAAAATGCACACCACAGAGAGGAT...GACCACATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR TCA 90 bp | AACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTGGTCTCCTTACTCCCATTGCATaGAGAGTCTCTATCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKPRVSLHCGPSNDRCGLLTPIA*RVSILF Trigger: AAACAAGATAGAGACTCTTCATGCAATGGGAGTAAG...GAGACCACATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGAATCAGTGTTCTTTTTATTATATGGTGGGGAATCGAATTAGTCCTTTGTCCTGTGTGGACCCGCTaGTGGCTGTGGAGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGISVLFIIWWGIELVLCPVWTR*WLWRLK Trigger: CTTCAACCTCCACAGCCATCAGCGGGTCCACACAGG...ACAAAGGACTAATTCGATTCCCCACCATATAATAAAAAGAACACTGATTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
||
| CDS-3UTR TCA 90 bp | GTTACCCACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTTGGAGGATTGAGGCCTaGCGGAACCTTTTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTHSETISALVGVTMIFCWRIEA*RNLFWH Trigger: GTGCCAGAAAAGGTTCCGTCAGGCCTCAATCCTCCA...ACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR GCA 90 bp | GTTACCCACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTACTCTGGCCTCCCACTaGCAGGAGGTTCCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTHSETISALVGVTMIFCTLASH*QEVPEV Trigger: AACTTCAGGAACCTCCTGGCAGTGGGAGGCCAGAGT...ACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | GTTACCCACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTGTGTGGACTCTCTGGTaGGTGTGGAGGTTCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VTHSETISALVGVTMIFCVWTLW*VWRFQL Trigger: TAGCTGGAACCTCCACACCCACCAGAGAGTCCACAC...ACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTTGGTTTTGGAGGATTGAGGCCTaGCGGAACCTTTTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSETISALVGVTMIFCWFWRIEA*RNLFWH Trigger: GTGCCAGAAAAGGTTCCGTCAGGCCTCAATCCTCCA...AAACCAACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCCCGTGCTTTTAGGATGTTTATTGGCAATTTCTTCCATATAGTTGCTATAGACCGGACCTCTGGCTaGAGACTTTCCCACACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSRAFRMFIGNFFHIVAIDRTSG*RLSHTC Trigger: ACACGTGTGGGAAAGTCTTCAGCCAGAGGTCCGGTC...TATAGCAACTATATGGAAGAAATTGCCAATAAACATCCTAAAAGCACGGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
||
| CDS-3UTR TCA 90 bp | GTTACCCACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTATGTGTGTGGAAGTGTaGGGCCTGACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTHSETISALVGVTMIFCMCVEV*GLTEAL Trigger: AAGGGCTTCAGTCAGGCCTCACACTTCCACACACAT...ACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAATCAGTGTTCTTTTTATTATATGGTGGGGAATCGAATTAGTCCTTTGCCAGGGAGGCTTTTCTaGTCCCTTGTGGCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRNQCSFYYMVGNRISPLPGRLF*SLVAWL Trigger: GAGCCATGCCACAAGGGAGCAGAAAAGCCTCCCTGG...CAAAGGACTAATTCGATTCCCCACCATATAATAAAAAGAACACTGATTCCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
||
| CDS-3UTR CCA 90 bp | CACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTTGGTTTATCTTGTTTGGACTCTaGCCTCCCACTGCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSETISALVGVTMIFCWFILFGL*PPTARR Trigger: CCTCCTGGCAGTGGGAGGCCAGAGTCCAAACAAGAT...AAACCAACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR GCA 90 bp | GTTACCCACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTGATCACAGTCACCGCTaGTGGGGACTTTGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTHSETISALVGVTMIFCDHSHR*WGLCLF Trigger: AAAGAGACAAAGTCCCCAGCAGCGGTGACTGTGATC...ACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | GCTAAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAACTCTCTGGTGGGTGTaGAGGTTCCAGCTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKKVQSKILSSFFIMSSVTLWWV*RFQLQL Trigger: CAGCTGTAGCTGGAACCTCCACACCCACCAGAGAGT...TACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAGGAACCCTCTGGTGTCTTTaGAAGCTTGAGGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KKVQSKILSSFFIMSSVGTLWCL*KLEAEL Trigger: CAGTTCAGCCTCAAGCTTCCAAAGACACCAGAGGGT...TCCTACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR GCA 90 bp | TTCAGGAATCAGTGTTCTTTTTATTATATGGTGGGGAATCGAATTAGTCCTTTGTATCTTGATGGGAAATaGAACTCAGCACGTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FRNQCSFYYMVGNRISPLYLDGK*NSARQH Trigger: GTGCTGACGTGCTGAGTTGCATTTCCCATCAAGATA...CAAAGGACTAATTCGATTCCCCACCATATAATAAAAAGAACACTGATTCCTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
||
| CDS-3UTR CCA 90 bp | GCTAAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAATTCTCTCGTGTATCTaGAGATGGTCCCACTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKKVQSKILSSFFIMSSVILSCI*RWSHFV Trigger: CACAAAGTGGGACCATCTCCAGATACACGAGAGAAT...TACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | GCTAAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTATTCTGGCTAGTTTGTTaGCATCATGGCTCGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AKKVQSKILSSFFIMSSVFWLVC*HHGSSF Trigger: AAATGACGAGCCATGATGTCAACAAACTAGCCAGAA...TACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAGGAATCCTCTCTGTGGTGTaGATTTTCAAATGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKVQSKILSSFFIMSSVGILSVV*IFKCVW Trigger: CCACACACATTTGAAAATGCACACCACAGAGAGGAT...TCCTACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CCA 90 bp | TTCAGGAATCAGTGTTCTTTTTATTATATGGTGGGGAATCGAATTAGTCCTTTGCACATCACATCTGTATaGCTTTTCCCTGGTATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRNQCSFYYMVGNRISPLHITSV*LFPGMN Trigger: GTTCATACCAGGGAAAAGCCATACAGATGTGATGTG...CAAAGGACTAATTCGATTCCCCACCATATAATAAAAAGAACACTGATTCCTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
||
| CDS-3UTR TCA 90 bp | GCTAAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTACCAGACAGAAATTCTTaGCTTTCAGTAATACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AKKVQSKILSSFFIMSSVPDRNS*LSVIPE Trigger: TTCTGGTATTACTGAAAGTCAAGAATTTCTGTCTGG...TACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR TCA 90 bp | AAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAGGACCAGACAGAAATTCTTaGCTTTCAGTAATACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKVQSKILSSFFIMSSVGPDRNS*LSVIPE Trigger: TTCTGGTATTACTGAAAGTCAAGAATTTCTGTCTGG...TCCTACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCACGTGGTCCTGGAGGATaGAGGCCTGACGGAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGFGDTGNNQQRGVHLSARGPGG*RPDGTF Trigger: AAAGGTTCCGTCAGGCCTCAATCCTCCAGGACCACG...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTGGCACCTTACTCCCATaGCATGAAGAGTCTCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: WSPPECRTNLGFPCTVGPGTLLP*HEESLS Trigger: AGATAGAGACTCTTCATGCAATGGGAGTAAGGTGCC...AGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCGGCACCTTACTCCCATaGCATGAAGAGTCTCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: QPAAWSPPECRTNLGFPCGTLLP*HEESLS Trigger: AGATAGAGACTCTTCATGCAATGGGAGTAAGGTGCC...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGGCTTTTCTGCTCCCTaGTGGCATGGCTCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ECRTNLGFPCTVGPLMIDGFSAP*WHGSRK Trigger: CTTCCTGGAGCCATGCCACAAGGGAGCAGAAAAGCC...ATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | CAACCAGCAGCGTGGAGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCCCGCTGCTGGGGACTTaGTCTCTTTTATGCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: QPAAWSPPECRTNLGFPCPLLGT*SLLCSI Trigger: TATACTGCATAAAAGAGACAAAGTCCCCAGCAGCGG...GCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCACGCTGCTGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATATCATGGCTCGTCATTaGCCAGCATGGAAGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ECRTNLGFPCTVGPLMIDIMARH*PAWKPL Trigger: GAGCGGCTTCCATGCTGGCAAATGACGAGCCATGAT...ATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | AGTCCACCTGAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTACCGCTGCTGGGGACTTaGTCTCTTTTATGCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: SPPECRTNLGFPCTVGPLPLLGT*SLLCSI Trigger: TATACTGCATAAAAGAGACAAAGTCCCCAGCAGCGG...TAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 90 bp | CGTGACACCAGTAGCGCTTTGTTCCTAGATGAACACTTGGTTGAATaGGGACACTGGGGCTCTGCCTGGTGTCCTTGTGAGTACTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDTSSALFLDEHLVE*GHWGSAWCPCEYYA Trigger: TGCATAGTACTCACAAGGACACCAGGCAGAGCCCCAGTGTCCTCATTCAACCAAGTGTTCATCTAGGAACAAAGCGCTACTGGTGTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGTTTGGTGACACTGGTAACAACCAGCAGCGTGGAGTCCACCTGAGTGCACTTTTCTGGCACACATaGCATTTGAATGGTCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGFGDTGNNQQRGVHLSALFWHT*HLNGLS Trigger: CGAGAGACCATTCAAATGCAATGTGTGCCAGAAAAG...TGCACTCAGGTGGACTCCACGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS GCA 90 bp | TCTTCTGGAGTTCTGGCTAGTTTGTTGACATCATGGCTCGTCATTTaGCAGCATGGAAGCCGCTCCAGTGAAAGGCACCTTACTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SSGVLASLLTSWLVI*QHGSRSSERHLTPI Trigger: AATGGGAGTAAGGTGCCTTTCACTGGAGCGGCTTCCATGCTGGCAAATGACGAGCCATGATGTCAACAAACTAGCCAGAACTCCAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS GCA 90 bp | ATGGGAAATGCAACTCAGCACGTCAGCACTGAGAGCCGACAGCTGTaGCTTATTTTTCACCCAAGTCTGAGGACAGTGTTTCCATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MGNATQHVSTESRQL*LIFHPSLRTVFPLV Trigger: GACCAATGGAAACACTGTCCTCAGACTTGGGTGAAAAATAAGGCACAGCTGTCGGCTCTCAGTGCTGACGTGCTGAGTTGCATTTCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGGAGTTCTGGCTAGTTaGTTGACATCATGGCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ECRTNLGFPCTVGPLMIDGVLAS*LTSWLV Trigger: GACGAGCCATGATGTCAACAAACTAGCCAGAACTCC...ATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 90 bp | GTTGACATCATGGCTCGTCATTTGCCAGCATGGAAGCCGCTCCAGTaGAAGGCACCTTACTCCCATTGCATGAAGAGTCTCTATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VDIMARHLPAWKPLQ*KAPYSHCMKSLYLV Trigger: AACAAGATAGAGACTCTTCATGCAATGGGAGTAAGGTGCCTTTCACTGGAGCGGCTTCCATGCTGGCAAATGACGAGCCATGATGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 90 bp | CCGCTGCTGGGGACTTTGTCTCTTTTATGCAGTATATTGTTATCTTaGTGGGAAATGCAACTCAGCACGTCAGCACTGAGAGCCGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLGTLSLLCSILLS*WEMQLSTSALRADS Trigger: GCTGTCGGCTCTCAGTGCTGACGTGCTGAGTTGCATTTCCCATCAAGATAACAATATACTGCATAAAAGAGACAAAGTCCCCAGCAGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS CCA 90 bp | GTGTTTATTCCATCTTCTGGAGTTCTGGCTAGTTTGTTGACATCATaGCTCGTCATTTGCCAGCATGGAAGCCGCTCCAGTGAAAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFIPSSGVLASLLTS*LVICQHGSRSSERH Trigger: GTGCCTTTCACTGGAGCGGCTTCCATGCTGGCAAATGACGAGCCATGATGTCAACAAACTAGCCAGAACTCCAGAAGATGGAATAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS TCA 90 bp | TTCCTTGAGTGTTTATTCCATCTTCTGGAGTTCTGGCTAGTTTGTTaGCATCATGGCTCGTCATTTGCCAGCATGGAAGCCGCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLECLFHLLEFWLVC*HHGSSFASMEAAPV Trigger: CACTGGAGCGGCTTCCATGCTGGCAAATGACGAGCCATGATGTCAACAAACTAGCCAGAACTCCAGAAGATGGAATAAACACTCAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGCAGAACAAACCTAGGGTTTCCCTGCACTGTGGGCCCTCTAATGATAGATGTTCTGGCTAGTTTGTaGACATCATGGCTCGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ECRTNLGFPCTVGPLMIDVLASL*TSWLVI Trigger: AATGACGAGCCATGATGTCAACAAACTAGCCAGAAC...ATCTATCATTAGAGGGCCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR CAA 90 bp | CACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTTGGTTTCGTGGTCCTGGAGGATaGAGGCCTGACGGAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSETISALVGVTMIFCWFRGPGG*RPDGTF Trigger: AAAGGTTCCGTCAGGCCTCAATCCTCCAGGACCACG...AAACCAACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTAGGAGGCTTTTCTGCTCCCTaGTGGCATGGCTCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KKVQSKILSSFFIMSSVGGFSAP*WHGSRK Trigger: CTTCCTGGAGCCATGCCACAAGGGAGCAGAAAAGCC...TCCTACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAATCAGTGTTCTTTTTATTATATGGTGGGGAATCGAATTAGTCCTTTGATCATGGCTCGTCATTaGCCAGCATGGAAGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FRNQCSFYYMVGNRISPLIMARH*PAWKPL Trigger: GAGCGGCTTCCATGCTGGCAAATGACGAGCCATGAT...CAAAGGACTAATTCGATTCCCCACCATATAATAAAAAGAACACTGATTCCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAATCAGTGTTCTTTTTATTATATGGTGGGGAATCGAATTAGTCCTTTGGGAGTTCTGGCTAGTTaGTTGACATCATGGCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FRNQCSFYYMVGNRISPLGVLAS*LTSWLV Trigger: GACGAGCCATGATGTCAACAAACTAGCCAGAACTCC...CAAAGGACTAATTCGATTCCCCACCATATAATAAAAAGAACACTGATTCCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205982.2 |
||
| CDS-3UTR CAA 90 bp | CACAGTGAAACAATCTCAGCATTAGTAGGAGTCACAATGATTTTCTGTTGGTTTCTGGTAGGCCTTCTGTaGTGTGTAATCACAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: HSETISALVGVTMIFCWFLVGLL*CVITIL Trigger: CAGGATTGTGATTACACACAACAGAAGGCCTACCAG...AAACCAACAGAAAATCATTGTGACTCCTACTAATGCTGAGATTGTTTCACTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | GCTAAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTACTGGTAGGCCTTCTGTaGTGTGTAATCACAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: AKKVQSKILSSFFIMSSVLVGLL*CVITIL Trigger: CAGGATTGTGATTACACACAACAGAAGGCCTACCAG...TACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS-3UTR CAA 90 bp | GCTAAGAAGGTCCAGTCTAAAATACTATCTTCCTTTTTCATAATGAGCTCAGTACTTTTCTGGCACACATaGCATTTGAATGGTCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: AKKVQSKILSSFFIMSSVLFWHT*HLNGLS Trigger: CGAGAGACCATTCAAATGCAATGTGTGCCAGAAAAG...TACTGAGCTCATTATGAAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS GCA 72 bp | ACAGCCATCATCCTCAGAGGCCCAGGGAGGCTTTTCTaGTCCCTTGTGGCATGGCTCCAGGAAGTGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: TAIILRGPGRLF*SLVAWLQEVGT Trigger: GGTTCCCACTTCCTGGAGCCATGCCACAAGGGAGCAGAAAAGCCTCCCTGGGCCTCTGAGGATGATGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | CTCCCCTGTGTGTACCCTCTCGTGGTCCTGGAGGATTaGGGCCTGACGGAACCTTTTCTGGCACACATTGCA | + |
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Preference number: 6 (lower is better) Translates to: LPCVYPLVVLED*GLTEPFLAHIA Trigger: TGCAATGTGTGCCAGAAAAGGTTCCGTCAGGCCTCAATCCTCCAGGACCACGAGAGGGTACACACAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS CCA 72 bp | AGAGGCCCAGGGAGGCTTTTCTGCTCCCTTGTGGCATaGCTCCAGGAAGTGGGAACCCTTTCCTTGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RGPGRLFCSLVA*LQEVGTLSLSV Trigger: AACACTCAAGGAAAGGGTTCCCACTTCCTGGAGCCATGCCACAAGGGAGCAGAAAAGCCTCCCTGGGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | ATGGCTCGTCATTTGCCAGCATGGAAGCCGCTCCAGTaGAAGGCACCTTACTCCCATTGCATGAAGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: MARHLPAWKPLQ*KAPYSHCMKSL Trigger: GAGACTCTTCATGCAATGGGAGTAAGGTGCCTTTCACTGGAGCGGCTTCCATGCTGGCAAATGACGAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | CAATCCTGGGTGAGGGATGACATGGGATTGATGACTTaGTCACAGTCACCGCTGCTGGGGACTTTGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: QSWVRDDMGLMT*SQSPLLGTLSL Trigger: AAGAGACAAAGTCCCCAGCAGCGGTGACTGTGATCAAGTCATCAATCCCATGTCATCCCTCACCCAGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | AGTAGCGCTTTGTTCCTAGATGAACACTTGGTTGAATaGGGACACTGGGGCTCTGCCTGGTGTCCTTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSALFLDEHLVE*GHWGSAWCPCE Trigger: CTCACAAGGACACCAGGCAGAGCCCCAGTGTCCTCATTCAACCAAGTGTTCATCTAGGAACAAAGCGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | GTGTGTACCCTCTCGTGGTCCTGGAGGATTGAGGCCTaGCGGAACCTTTTCTGGCACACATTGCATTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VCTLSWSWRIEA*RNLFWHTLHLN Trigger: ATTCAAATGCAATGTGTGCCAGAAAAGGTTCCGTCAGGCCTCAATCCTCCAGGACCACGAGAGGGTACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS GCA 72 bp | GTTCTGGCTAGTTTGTTGACATCATGGCTCGTCATTTaGCAGCATGGAAGCCGCTCCAGTGAAAGGCACCTT | + |
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Preference number: 6 (lower is better) Translates to: VLASLLTSWLVI*QHGSRSSERHL Trigger: AAGGTGCCTTTCACTGGAGCGGCTTCCATGCTGGCAAATGACGAGCCATGATGTCAACAAACTAGCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS GCA 72 bp | GCAACTCAGCACGTCAGCACTGAGAGCCGACAGCTGTaGCTTATTTTTCACCCAAGTCTGAGGACAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ATQHVSTESRQL*LIFHPSLRTVF Trigger: AAACACTGTCCTCAGACTTGGGTGAAAAATAAGGCACAGCTGTCGGCTCTCAGTGCTGACGTGCTGAGTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS CCA 72 bp | CCTTACTCCCATTGCATGAAGAGTCTCTATCTTGTTTaGACTCTGGCCTCCCACTGCCAGGAGGTTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PYSHCMKSLYLV*TLASHCQEVPE Trigger: TTCAGGAACCTCCTGGCAGTGGGAGGCCAGAGTCCAAACAAGATAGAGACTCTTCATGCAATGGGAGTAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS CCA 72 bp | CCATCTTCTGGAGTTCTGGCTAGTTTGTTGACATCATaGCTCGTCATTTGCCAGCATGGAAGCCGCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PSSGVLASLLTS*LVICQHGSRSS Trigger: ACTGGAGCGGCTTCCATGCTGGCAAATGACGAGCCATGATGTCAACAAACTAGCCAGAACTCCAGAAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS CAA 72 bp | ATGAAGTTCCAGACTAGGGCTGTCACTGAAGACTTCTaGGCCCTTGCTGCACTGGTAGGCCTTCTGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: MKFQTRAVTEDF*ALAALVGLLLC Trigger: ACACAACAGAAGGCCTACCAGTGCAGCAAGGGCCAAGAAGTCTTCAGTGACAGCCCTAGTCTGGAACTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | ACAGTGTTTCCATTGGTCATGTCTCTCACTAGGATGTaGTTTACTCGAAGAGCTTTGAGCGCCCCCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: TVFPLVMSLTRM*FTRRALSAPRQ Trigger: CTGTCTGGGGGCGCTCAAAGCTCTTCGAGTAAATCACATCCTAGTGAGAGACATGACCAATGGAAACACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | CTTCTGTTGTGTGTAATCACAATCCTGGGTGAGGGATaGCATGGGATTGATGACTTGATCACAGTCACCGCT | + |
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Preference number: 6 (lower is better) Translates to: LLLCVITILGEG*HGIDDLITVTA Trigger: AGCGGTGACTGTGATCAAGTCATCAATCCCATGTCATCCCTCACCCAGGATTGTGATTACACACAACAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS CAA 72 bp | GTGTTTATTCCATCTTCTGGAGTTCTGGCTAGTTTGTaGACATCATGGCTCGTCATTTGCCAGCATGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: VFIPSSGVLASL*TSWLVICQHGS Trigger: GCTTCCATGCTGGCAAATGACGAGCCATGATGTCAACAAACTAGCCAGAACTCCAGAAGATGGAATAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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| CDS TCA 72 bp | GGGACTTTGTCTCTTTTATGCAGTATATTGTTATCTTaGTGGGAAATGCAACTCAGCACGTCAGCACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GTLSLLCSILLS*WEMQLSTSALR Trigger: TCTCAGTGCTGACGTGCTGAGTTGCATTTCCCATCAAGATAACAATATACTGCATAAAAGAGACAAAGTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072713.7 ENSMUST00000205982.2 ENSMUST00000206777.2 |
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