Pregenerated sensors for ZFP101 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055240Ensembl transcript IDs: ENSMUST00000167107.10, ENSMUST00000174417.2, ENSMUST00000174512.4
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTaGGCAAGCCAGGGGAAGCAAGGCAGTAAAGAACATCCCTCCATG | + |
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Preference number: 1 (lower is better) Translates to: DHLWAGSLGFYKRAG*ASQGKQGSKEHPSM Trigger: CATGGAGGGATGTTCTTTACTGCCTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR GCA 90 bp | GTGGGATGGAGACAGCATGAGCCGATAGGTCAAGTGATGGATGTGTaGTGTGTATGGCAGAGCCAGAAACATTGTGTTACCCAAGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: VGWRQHEPIGQVMDV*CVWQSQKHCVTQAL Trigger: GAGGGCTTGGGTAACACAATGTTTCTGGCTCTGCCATACACAGCACACATCCATCACTTGACCTATCGGCTCATGCTGTCTCCATCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR TCA 90 bp | CTCTGTCACCAGATCTCTGCCCAGATGTCCCATGAAGAGGGGCTGTaGTCTGGAAGGCAGGCAGGAGCCAAAATAAGTTCTTACTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LCHQISAQMSHEEGL*SGRQAGAKISSYFL Trigger: TAGGAAGTAAGAACTTATTTTGGCTCCTGCCTGCCTTCCAGATCACAGCCCCTCTTCATGGGACATCTGGGCAGAGATCTGGTGACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CCA 90 bp | CTTGAGTTCCTGCTTCCAGAGATGGCCCAGCTTAGCCTCCTGGCCTaGCTTCCCATGATGATAGACTGTGACATGAAGTATAAGCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LEFLLPEMAQLSLLA*LPMMIDCDMKYKPK Trigger: TTTTGGCTTATACTTCATGTCACAGTCTATCATCATGGGAAGCCAGGCCAGGAGGCTAAGCTGGGCCATCTCTGGAAGCAGGAACTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR TCA 90 bp | GAACCTATCTTTGACTCCCAGCACCCACACAATGGCTCACAACTGTaGATAGGAATCTTAGGCCCTTTTCTGTCCTCCATGGGCACTACA | + |
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Preference number: 1 (lower is better) Translates to: EPIFDSQHPHNGSQL*IGILGPFLSSMGTT Trigger: TGTAGTGCCCATGGAGGACAGAAAAGGGCCTAAGATTCCTATTCACAGTTGTGAGCCATTGTGTGGGTGCTGGGAGTCAAAGATAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CCA 90 bp | GCTGAAACCCCAGTTACAGAGGAAACATCGGGATGGAAGGGTTTATaGAGATCATCTGAGATTTTTGTACCGAGTGCCAGGGTTGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: AETPVTEETSGWKGL*RSSEIFVPSARVGV Trigger: AACTCCAACCCTGGCACTCGGTACAAAAATCTCAGATGATCTCCATAAACCCTTCCATCCCGATGTTTCCTCTGTAACTGGGGTTTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CCA 90 bp | GGTATTAATTTTGGCAGTATGAGAGCTGCAGGAACAAAGGAGTCATaGAGAGCTGAGGCAGGGTACCATGAAAGGCCAGAAGATGTCACT | + |
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Preference number: 1 (lower is better) Translates to: GINFGSMRAAGTKES*RAEAGYHERPEDVT Trigger: AGTGACATCTTCTGGCCTTTCATGGTACCCTGCCTCAGCTCTCCATGACTCCTTTGTTCCTGCAGCTCTCATACTGCCAAAATTAATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR TCA 90 bp | AGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTaGATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCGTGATGTT | + |
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Preference number: 1 (lower is better) Translates to: SPDFLGDEQQCGSVS*INPFLPNLLLGRDV Trigger: AACATCACGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR TCA 90 bp | CAACTTGACACAGGCTGGAGTTATCACAGAGAAAGGAGCTCCAGTTaGGGAAATGCCTCCATGAGATCCAGCTATAAGGCATTTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: QLDTGWSYHRERSSS*GNASMRSSYKAFSQ Trigger: TTGAGAAAATGCCTTATAGCTGGATCTCATGGAGGCATTTCCTCAACTGGAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CCA 90 bp | TTGATCAGCACAAAGACCACAAGGGGCTACGGTTGCATTTCAAGTTaGCAGCAAAGCATGACAATGTGTAAGATTCTGCCAGGTGGTATT | + |
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Preference number: 1 (lower is better) Translates to: LISTKTTRGYGCISS*QQSMTMCKILPGGI Trigger: AATACCACCTGGCAGAATCTTACACATTGTCATGCTTTGCTGCCAACTTGAAATGCAACCGTAGCCCCTTGTGGTCTTTGTGCTGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR TCA 90 bp | AGACCACAAGGGGCTACGGTTGCATTTCAAGTTGGCAGCAAAGCATaGCAATGTGTAAGATTCTGCCAGGTGGTATTAATTTTGGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: RPQGATVAFQVGSKA*QCVRFCQVVLILAV Trigger: TACTGCCAAAATTAATACCACCTGGCAGAATCTTACACATTGTCATGCTTTGCTGCCAACTTGAAATGCAACCGTAGCCCCTTGTGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR GCA 90 bp | ATGCGTTCTCTCATGATGCGGATCACAATGGAGGTTTCTATGAGCTaGATCACATTGCTGATTTTCATAGGATTTCTCTCGAGAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: MRSLMMRITMEVSMS*ITLLIFIGFLSRTS Trigger: GGAAGTTCTCGAGAGAAATCCTATGAAAATCAGCAATGTGATGCAGCTCATAGAAACCTCCATTGTGATCCGCATCATGAGAGAACGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR TCA 90 bp | GTGCCTGCTTCTTCCCTTTTGAAATCAGAAATGCGTAACTACATTTaGTTTATAGGAGCCCTCAGCAGAGAACTTTTGGCACTGAATATG | + |
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Preference number: 1 (lower is better) Translates to: VPASSLLKSEMRNYI*FIGALSRELLALNM Trigger: CATATTCAGTGCCAAAAGTTCTCTGCTGAGGGCTCCTATAAATCAAATGTAGTTACGCATTTCTGATTTCAAAAGGGAAGAAGCAGGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CCA 90 bp | TGGAACAGGTTCACCTTAAAAGTCCTAAGTGCTATTCAAATGTCCTaGATTAGATACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: WNRFTLKVLSAIQMS*IRYCILLASYPTCK Trigger: CTTACAGGTAGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTGAATAGCACTTAGGACTTTTAAGGTGAACCTGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| 3UTR CCA 90 bp | CGAATTGTTACGTCGCATTTTGATGACATTCAGGAATTGCAGAGATaGGATCCTCAAATTCTGAATGATCACCCAATGCAGGCTTATACA | + |
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Preference number: 1 (lower is better) Translates to: RIVTSHFDDIQELQR*DPQILNDHPMQAYT Trigger: TGTATAAGCCTGCATTGGGTGATCATTCAGAATTTGAGGATCCCATCTCTGCAATTCCTGAATGTCATCAAAATGCGACGTAACAATTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR TCA 90 bp | ATTTTGATGACATTCAGGAATTGCAGAGATGGGATCCTCAAATTCTaGATGATCACCCAATGCAGGCTTATACACATCTATTTTAGGATT | + |
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Preference number: 1 (lower is better) Translates to: ILMTFRNCRDGILKF*MITQCRLIHIYFRI Trigger: AATCCTAAAATAGATGTGTATAAGCCTGCATTGGGTGATCATTCAGAATTTGAGGATCCCATCTCTGCAATTCCTGAATGTCATCAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTGAAGCCCAGATGAAACAGGGAACCTATCTTTaGCTCCCAGCACCCACACAA | + |
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Preference number: 2 (lower is better) Translates to: VLPKPSEDQKIMSEAQMKQGTYL*LPAPTQ Trigger: TTGTGTGGGTGCTGGGAGTCAAAGATAGGTTCCCTG...TTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | TCCATCAGACTGGTTTGTAGGCAAGTCTGTGGGGTGGGTATTTTCTaGATTAATAATGGACATGTAAGGCCTAGCCCATCTGGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SIRLVCRQVCGVGIF*INNGHVRPSPSGWC Trigger: GCACCACCCAGATGGGCTAGGCCTTACATGTCCATTATTAATCAAGAAAATACCCACCCCACAGACTTGCCTACAAACCAGTCTGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | TCCTCCCTCACAGTTCCAAGTATATCCTTCCTGAAGCTGTGTGCTTaGTTAAAGAGGATGGCCTTCCCTGAAGAGAGGAACACCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SSLTVPSISFLKLCA*LKRMAFPEERNTSL Trigger: AAGACTGGTGTTCCTCTCTTCAGGGAAGGCCATCCTCTTTAACAAAGCACACAGCTTCAGGAAGGATATACTTGGAACTGTGAGGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTGAAGCCCAGATGAAAGGGATCCTCAAATTCTaGATGATCACCCAATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLPKPSEDQKIMSEAQMKGILKF*MITQCR Trigger: CCTGCATTGGGTGATCATTCAGAATTTGAGGATCCC...TTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | CTTTCAGCTGGAACAGCCAACGAATGCTCAGAGTTTAATGATCTGTTTGGGCAATATAAGAGAGCAGGCTaGGCAAGCCAGGGGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LSAGTANECSEFNDLFGQYKRAG*ASQGKQ Trigger: TTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATA...TTGCCCAAACAGATCATTAAACTCTGAGCATTCGTTGGCTGTTCCAGCTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTGAAGCCCAGATGAAACTCCAGTTGAGGAAATaGCTCCATGAGATCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: VLPKPSEDQKIMSEAQMKLQLRK*LHEIQL Trigger: TAGCTGGATCTCATGGAGGCATTTCCTCAACTGGAG...TTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | AGGAAACATCGGGATGGAAGGGTTTATGGAGATCATCTGAGATTTTaGTACCGAGTGCCAGGGTTGGAGTTCCTGAAGAAAAGCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RKHRDGRVYGDHLRF*YRVPGLEFLKKSQE Trigger: TTCCTGGCTTTTCTTCAGGAACTCCAACCCTGGCACTCGGTACAAAAATCTCAGATGATCTCCATAAACCCTTCCATCCCGATGTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | GTGATCTGGAAGGCAGGCAGGAGCCAAAATAAGTTCTTACTTCCTAAGTTCTATGAGGTGACTCAGCAGTaGGGAGGAGTGACAGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VIWKAGRSQNKFLLPKFYEVTQQ*GGVTVL Trigger: AAGAACTGTCACTCCTCCTCACTGCTGAGTCACCTC...ATAGAACTTAGGAAGTAAGAACTTATTTTGGCTCCTGCCTGCCTTCCAGATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTGAAGCCCAGATGAAACTTTCCTCCCCAACTTaGTTCTTGGTCGTGATGTTT | + |
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Preference number: 2 (lower is better) Translates to: VLPKPSEDQKIMSEAQMKLSSPT*FLVVMF Trigger: AAACATCACGACCAAGAAGCAAGTTGGGGAGGAAAG...TTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGATGTGGCCAGCTAAGGAGTGTCTCTTTTCCTCCCTCACAGTTCCAAGTCAGGAATTGCAGAGATaGGATCCTCAAATTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: GVMWPAKECLFSSLTVPSQELQR*DPQILN Trigger: ATTCAGAATTTGAGGATCCCATCTCTGCAATTCCTG...ACTTGGAACTGTGAGGGAGGAAAAGAGACACTCCTTAGCTGGCCACATCACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTTTGTTAAAGAGGATGGCCTTCCCTGAAGAGAGGAACACCAGTCTTCAACCAGAAGATCATGAGTaGAGCCCAGATGAAATACAC | + |
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Preference number: 2 (lower is better) Translates to: CALLKRMAFPEERNTSLQPEDHE*SPDEIH Trigger: GTGTATTTCATCTGGGCTTCACTCATGATCTTCTGG...TTGAAGACTGGTGTTCCTCTCTTCAGGGAAGGCCATCCTCTTTAACAAAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTGAAGCCCAGATGAAAGATTGTAGCTGTGCCTaGTTCTTCCCTTTTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: VLPKPSEDQKIMSEAQMKDCSCA*FFPFEI Trigger: GATTTCAAAAGGGAAGAAGCAGGCACAGCTACAATC...TTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTGTCACCAGATCTCTGCCCAGATGTCCCATGAAGAGGGGCTGTGATCTGTCAATGTTGTACATGTaGAACTCAGAAGACAACTTT | + |
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Preference number: 2 (lower is better) Translates to: ISVTRSLPRCPMKRGCDLSMLYM*NSEDNF Trigger: AAAGTTGTCTTCTGAGTTCCACATGTACAACATTGA...CAGATCACAGCCCCTCTTCATGGGACATCTGGGCAGAGATCTGGTGACAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | GAACAGCCAACGAATGCTCAGAGTTTAATGATCTGTTTGGGCAACTaGGAATGTAAGGATGCTAACAGCAATGTGGACAATGGAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: EQPTNAQSLMICLGN*ECKDANSNVDNGSC Trigger: GCAGCTTCCATTGTCCACATTGCTGTTAGCATCCTTACATTCCAAGTTGCCCAAACAGATCATTAAACTCTGAGCATTCGTTGGCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTGAAGCCCAGATGAAACTGCTTCTTCCCTTTTaGAATCAGAAATGCGTAACT | + |
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Preference number: 2 (lower is better) Translates to: VLPKPSEDQKIMSEAQMKLLLPF*NQKCVT Trigger: AGTTACGCATTTCTGATTTCAAAAGGGAAGAAGCAG...TTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTTTGTTAAAGAGGATGGCCTTCCCTGAAGAGAGGAACACCAGTCTTCAAAGAAAAGCCAGGAAGTaGATGATGGACCTTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: CALLKRMAFPEERNTSLQRKARK*MMDLSI Trigger: TATGCTAAGGTCCATCATCCACTTCCTGGCTTTTCT...TTGAAGACTGGTGTTCCTCTCTTCAGGGAAGGCCATCCTCTTTAACAAAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | TTTATCACAGGACAAGAAAGCAAACTAAAGGAGGCCCACAGGCTATaGCCGTTACAGACTAGCCATGTTGTTTTTGGAAAGAAAGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: FITGQESKLKEAHRL*PLQTSHVVFGKKAE Trigger: TTCCGCTTTCTTTCCAAAAACAACATGGCTAGTCTGTAACGGCAATAGCCTGTGGGCCTCCTTTAGTTTGCTTTCTTGTCCTGTGATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | CTTTCAGCTGGAACAGCCAACGAATGCTCAGAGTTTAATGATCTGTTTGGGCAATTTCAGAGGGATGTCTaGGAGTATAAAGGTGATGTG | + |
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Preference number: 2 (lower is better) Translates to: LSAGTANECSEFNDLFGQFQRDV*EYKGDV Trigger: CACATCACCTTTATACTCTCAGACATCCCTCTGAAA...TTGCCCAAACAGATCATTAAACTCTGAGCATTCGTTGGCTGTTCCAGCTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTCTTGAGTTTGACCACTaGGGTGCACATCCCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFLEFDH*GAHPRV Trigger: CACCCTGGGATGTGCACCTCAGTGGTCAAACTCAAG...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | TTGTATGGAATGCACCACTGGAAAGAAAATCTCTTAGAGAGCGAATaGTTACGTCGCATTTTGATGACATTCAGGAATTGCAGAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LYGMHHWKENLLESE*LRRILMTFRNCRDG Trigger: CCCATCTCTGCAATTCCTGAATGTCATCAAAATGCGACGTAACAATTCGCTCTCTAAGAGATTTTCTTTCCAGTGGTGCATTCCATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR CCA 90 bp | GTGATCTGGAAGGCAGGCAGGAGCCAAAATAAGTTCTTACTTCCTAAGTTCTATAAGGCAATGTTTGTATaGAATGCACCACTGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VIWKAGRSQNKFLLPKFYKAMFV*NAPLER Trigger: TCTTTCCAGTGGTGCATTCCATACAAACATTGCCTT...ATAGAACTTAGGAAGTAAGAACTTATTTTGGCTCCTGCCTGCCTTCCAGATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR GCA 90 bp | AATGTTGTACATGTGGAACTCAGAAGACAACTTTTGGGAACTCCATGTGAGTTTATGACATTCAGGAATTaGAGAGATGGGATCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: NVVHVELRRQLLGTPCEFMTFRN*RDGILK Trigger: TTTGAGGATCCCATCTCTGCAATTCCTGAATGTCAT...AAACTCACATGGAGTTCCCAAAAGTTGTCTTCTGAGTTCCACATGTACAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR GCA 90 bp | GTGATCTGGAAGGCAGGCAGGAGCCAAAATAAGTTCTTACTTCCTAAGTTCTATAATGTTTGTATGGAATaGACCACTGGAAAGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: VIWKAGRSQNKFLLPKFYNVCME*TTGKKI Trigger: GATTTTCTTTCCAGTGGTGCATTCCATACAAACATT...ATAGAACTTAGGAAGTAAGAACTTATTTTGGCTCCTGCCTGCCTTCCAGATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAAGGAAAGCAGATAGACATCAAAATATGTATGGGAACAGGATTTCATCCTCAGAAGACAACTTTTaGGAACTCCATGTGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PVRKADRHQNMYGNRISSSEDNF*ELHVSF Trigger: GAAACTCACATGGAGTTCCCAAAAGTTGTCTTCTGA...GGATGAAATCCTGTTCCCATACATATTTTGATGTCTATCTGCTTTCCTTACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTCAGCAATGTGGACAATaGAAGCTGCCTTGTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFQQCGQ*KLPCQV Trigger: AACTTGACAAGGCAGCTTCCATTGTCCACATTGCTG...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | AGGCAGGCAGGAGCCAAAATAAGTTCTTACTTCCTAAGTTCTATTTaGTCCTGGTGTTTATCTCAGCAAGAAAAAGCAAATTACAAACAG | + |
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Preference number: 2 (lower is better) Translates to: RQAGAKISSYFLSSI*SWCLSQQEKANYKQ Trigger: CTGTTTGTAATTTGCTTTTTCTTGCTGAGATAAACACCAGGACAAAATAGAACTTAGGAAGTAAGAACTTATTTTGGCTCCTGCCTGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 90 bp | TTCACAACATTTAAGTTGGTTATATTTCACTCCACTGTGAACTTTTaGGTGTGTGAGAAGGTATTTCCAAGAACTGAATCCTGTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: FTTFKLVIFHSTVNF*VCEKVFPRTESCGT Trigger: GGTACCACAGGATTCAGTTCTTGGAAATACCTTCTCACACACCAAAAAGTTCACAGTGGAGTGAAATATAACCAACTTAAATGTTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | CACAAATACATTCAATGTTGTACATGTGGAACTCAGAAGACAACTTTTGGGAACTGTAAATTACTCTCTTaGGTTTCAATGACCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: HKYIQCCTCGTQKTTFGNCKLLS*VSMTPE Trigger: TTCTGGGGTCATTGAAACTCAAGAGAGTAATTTACA...GTTCCCAAAAGTTGTCTTCTGAGTTCCACATGTACAACATTGAATGTATTTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTTTCCCAAGTTGCTTTTaGTTGTGGTATTTATCACAG | + |
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Preference number: 2 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFFPSCF*LWYLSQ Trigger: CTGTGATAAATACCACAATCAAAAGCAACTTGGGAA...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTTACCTGGGAAGATTTTaGTACTGGAATGCTTTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFYLGRF*YWNAFD Trigger: ATCAAAAGCATTCCAGTACCAAAATCTTCCCAGGTA...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTCAATGTGTAAGATTCTaGCAGGTGGTATTAATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFQCVRF*QVVLIL Trigger: CAAAATTAATACCACCTGGCAGAATCTTACACATTG...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | CAAGGGGGAAGGGCCCCTTGTGGGTGGGACCATCTCTaGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGGRAPCGWDHL*AGSLGFYKRAG Trigger: GCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTTCCCCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCTGTCACCAGATCTCTGCCCAGATGTCCCATGAAGAGGGGCTGTGATCTGCCAGGGAACCTATCTTaGACTCCCAGCACCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: ISVTRSLPRCPMKRGCDLPGNLS*TPSTHT Trigger: TGTGTGGGTGCTGGGAGTCAAAGATAGGTTCCCTGG...CAGATCACAGCCCCTCTTCATGGGACATCTGGGCAGAGATCTGGTGACAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | TCAATTAGTGATCAAGGGGGAAGGGCCCCTTGTGGGTaGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SISDQGGRAPCG*DHLWAGSLGFY Trigger: ATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTTCCCCCTTGATCACTAATTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | GCCAAGGACAGCAGTAGTTGTGGGATGGAGACAGCATaGGCCGATAGGTCAAGTGATGGATGTGTGCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AKDSSSCGMETA*ADRSSDGCVLC Trigger: ACACAGCACACATCCATCACTTGACCTATCGGCTCATGCTGTCTCCATCCCACAACTACTGCTGTCCTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | CTGCTTCCAGAGATGGCCCAGCTTAGCCTCCTGGCCTaGCTTCCCATGATGATAGACTGTGACATGAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LLPEMAQLSLLA*LPMMIDCDMKY Trigger: ATACTTCATGTCACAGTCTATCATCATGGGAAGCCAGGCCAGGAGGCTAAGCTGGGCCATCTCTGGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | TGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTaGGCAAGCCAGGGGAAGCAAGGCAGTAAAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: WAGSLGFYKRAG*ASQGKQGSKEH Trigger: ATGTTCTTTACTGCCTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | GTTCAGCATTCCTATGGGTGGGTTTGTAGTGGCACATaGCTCTGCCTTCAAGGGACCTGTAGTCCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VQHSYGWVCSGT*LCLQGTCSPLL Trigger: CAGAAGAGGACTACAGGTCCCTTGAAGGCAGAGTCATGTGCCACTACAAACCCACCCATAGGAATGCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | TTTGGCAGTATGAGAGCTGCAGGAACAAAGGAGTCATaGAGAGCTGAGGCAGGGTACCATGAAAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FGSMRAAGTKES*RAEAGYHERPE Trigger: TTCTGGCCTTTCATGGTACCCTGCCTCAGCTCTCCATGACTCCTTTGTTCCTGCAGCTCTCATACTGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | TTTGACTCCCAGCACCCACACAATGGCTCACAACTGTaGATAGGAATCTTAGGCCCTTTTCTGTCCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: FDSQHPHNGSQL*IGILGPFLSSM Trigger: CATGGAGGACAGAAAAGGGCCTAAGATTCCTATTCACAGTTGTGAGCCATTGTGTGGGTGCTGGGAGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | CATGTAAGGCCTAGCCCATCTGGGTGGTGCCACTCTTaGCCATATGGGCCTGCATTCTATAAGTTCTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: HVRPSPSGWCHS*PYGPAFYKFYK Trigger: CTTATAGAACTTATAGAATGCAGGCCCATATGGTCAAGAGTGGCACCACCCAGATGGGCTAGGCCTTACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | ACAGGCTGGAGTTATCACAGAGAAAGGAGCTCCAGTTaGGGAAATGCCTCCATGAGATCCAGCTATAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TGWSYHRERSSS*GNASMRSSYKA Trigger: TGCCTTATAGCTGGATCTCATGGAGGCATTTCCTCAACTGGAGCTCCTTTCTCTGTGATAACTCCAGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR GCA 72 bp | AGACAGCATGAGCCGATAGGTCAAGTGATGGATGTGTaGTGTGTATGGCAGAGCCAGAAACATTGTGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: RQHEPIGQVMDV*CVWQSQKHCVT Trigger: GGTAACACAATGTTTCTGGCTCTGCCATACACAGCACACATCCATCACTTGACCTATCGGCTCATGCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTAGGGGGAAGGGCCCCTaGTGGGTGGGACCATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFRGKGP*WVGPSL Trigger: CAGAGATGGTCCCACCCACAAGGGGCCCTTCCCCCT...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | TGGGCAACTTGGAATGTAAGGATGCTAACAGCAATGTaGACAATGGAAGCTGCCTTGTCAAGTTTCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WATWNVRMLTAM*TMEAALSSFRG Trigger: CCCTCTGAAACTTGACAAGGCAGCTTCCATTGTCCACATTGCTGTTAGCATCCTTACATTCCAAGTTGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCAGCTGGAACAGCCAACGAATGCTCAGAGTTTAATGATCTGTTTGGGCAATCCCCAACTTGCTTCTaGGTCGTGATGTTTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSAGTANECSEFNDLFGQSPTCF*VVMFCP Trigger: TGGACAAAACATCACGACCAAGAAGCAAGTTGGGGA...TTGCCCAAACAGATCATTAAACTCTGAGCATTCGTTGGCTGTTCCAGCTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | ATCTTAGGCCCTTTTCTGTCCTCCATGGGCACTACATaGATGTGGCACAGATATACATGCAAACCAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: ILGPFLSSMGTT*MWHRYTCKPST Trigger: TGTGCTTGGTTTGCATGTATATCTGTGCCACATTCATGTAGTGCCCATGGAGGACAGAAAAGGGCCTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | GTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTaGAGCCCAGATGAAATACACTCAGCTACAGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: VTQALRRPEDHE*SPDEIHSATEL Trigger: CAATTCTGTAGCTGAGTGTATTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR GCA 72 bp | GTTTCTCACATACAAACTGCTTCCACATCCTGTTGCTaGAGGAGGCATGTCCTCATTAACAATATACTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: VSHIQTASTSCC*RRHVLINNILR Trigger: CCGGAGTATATTGTTAATGAGGACATGCCTCCTGCAGCAACAGGATGTGGAAGCAGTTTGTATGTGAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | ACAAAGACCACAAGGGGCTACGGTTGCATTTCAAGTTaGCAGCAAAGCATGACAATGTGTAAGATTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TKTTRGYGCISS*QQSMTMCKILP Trigger: TGGCAGAATCTTACACATTGTCATGCTTTGCTGCCAACTTGAAATGCAACCGTAGCCCCTTGTGGTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | AGTTTCAGAGGGATGTCTGAGAGTATAAAGGTGATGTaGCTGCAACTTAGGTCATTCCCCTTGATCACTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFRGMSESIKVM*LQLRSFPLITR Trigger: CCTAGTGATCAAGGGGAATGACCTAAGTTGCAGCCACATCACCTTTATACTCTCAGACATCCCTCTGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTACCCAAGCCCTCAGAAGACCAGAAGATCATGAGTGAAGCCCAGATGAAATTACTAGGTTCTCAGTaGTCCTGTCATTCTCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: VLPKPSEDQKIMSEAQMKLLGSQ*SCHSQM Trigger: CATTTGAGAATGACAGGACAACTGAGAACCTAGTAA...TTTCATCTGGGCTTCACTCATGATCTTCTGGTCTTCTGAGGGCTTGGGTAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | TTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTaGATAAACCCTTTCCTCCCCAACTTGCTTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FLGDEQQCGSVS*INPFLPNLLLG Trigger: ACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | GGGGCTACGGTTGCATTTCAAGTTGGCAGCAAAGCATaGCAATGTGTAAGATTCTGCCAGGTGGTATTAATT | + |
|
Preference number: 3 (lower is better) Translates to: GATVAFQVGSKA*QCVRFCQVVLI Trigger: AATTAATACCACCTGGCAGAATCTTACACATTGTCATGCTTTGCTGCCAACTTGAAATGCAACCGTAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR GCA 72 bp | ATTTTGATCAGCACAAAGACCACAAGGGGCTACGGTTaGATTTCAAGTTGGCAGCAAAGCATGACAATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ILISTKTTRGYG*ISSWQQSMTMC Trigger: ACACATTGTCATGCTTTGCTGCCAACTTGAAATGCAACCGTAGCCCCTTGTGGTCTTTGTGCTGATCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTTTATGGAGATCATCTGAGATTTTTGTACCGAGTGCCAGGGTTGGAGTTAAGAGGGAACCTCTATaGAGAAAACAGTTCCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGLWRSSEIFVPSARVGVKREPL*RKQFHQ Trigger: CTGATGGAACTGTTTTCTCAATAGAGGTTCCCTCTT...AACTCCAACCCTGGCACTCGGTACAAAAATCTCAGATGATCTCCATAAACCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | GAAGCTGTGTGCTTTGTTAAAGAGGATGGCCTTCCCTaGAGAGAGGAACACCAGTCTTCAATTAAAGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: EAVCFVKEDGLP*REEHQSSIKGI Trigger: TATACCTTTAATTGAAGACTGGTGTTCCTCTCTTCAGGGAAGGCCATCCTCTTTAACAAAGCACACAGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | TGGGAGGACATAGCTTATTGTGATTTGTCCCTCTTCTaGGCAAGCAGGCATGGGTTGTATACAAAAAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: WEDIAYCDLSLF*ASRHGLYTKSN Trigger: GTTACTTTTTGTATACAACCCATGCCTGCTTGCTCAGAAGAGGGACAAATCACAATAAGCTATGTCCTCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | ACGTCGCATTTTGATGACATTCAGGAATTGCAGAGATaGGATCCTCAAATTCTGAATGATCACCCAATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSHFDDIQELQR*DPQILNDHPMQ Trigger: CTGCATTGGGTGATCATTCAGAATTTGAGGATCCCATCTCTGCAATTCCTGAATGTCATCAAAATGCGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR GCA 72 bp | AAGTGTTTAGAACTTTCAGCTGGAACAGCCAACGAATaGTCAGAGTTTAATGATCTGTTTGGGCAACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KCLELSAGTANE*SEFNDLFGQLG Trigger: TCCAAGTTGCCCAAACAGATCATTAAACTCTGAGCATTCGTTGGCTGTTCCAGCTGAAAGTTCTAAACACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTACCCTACCTGTAAGGAAAGCAGATAGACATCAAAATATGTATGGGAACCACAATAAAGGCAAGTaGACCACACAGTTTATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPTLPVRKADRHQNMYGNHNKGK*TTQFIV Trigger: AACTATAAACTGTGTGGTCAACTTGCCTTTATTGTG...GTTCCCATACATATTTTGATGTCTATCTGCTTTCCTTACAGGTAGGGTAGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
||
| 3UTR TCA 72 bp | ACATTCAGGAATTGCAGAGATGGGATCCTCAAATTCTaGATGATCACCCAATGCAGGCTTATACACATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TFRNCRDGILKF*MITQCRLIHIY Trigger: ATAGATGTGTATAAGCCTGCATTGGGTGATCATTCAGAATTTGAGGATCCCATCTCTGCAATTCCTGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTCTCAAATGGTTTCTCTaGAGTTTGACCACTGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFLKWFL*SLTTEV Trigger: CACCTCAGTGGTCAAACTCAAGAGAAACCATTTGAG...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | TCAGGAATTGCAGAGATGGGATCCTCAAATTCTGAATaGTCACCCAATGCAGGCTTATACACATCTATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SGIAEMGSSNSE*SPNAGLYTSIL Trigger: TAAAATAGATGTGTATAAGCCTGCATTGGGTGATCATTCAGAATTTGAGGATCCCATCTCTGCAATTCCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | TCTTCCCTTTTGAAATCAGAAATGCGTAACTACATTTaGTTTATAGGAGCCCTCAGCAGAGAACTTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLLKSEMRNYI*FIGALSRELLA Trigger: TGCCAAAAGTTCTCTGCTGAGGGCTCCTATAAATCAAATGTAGTTACGCATTTCTGATTTCAAAAGGGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | TTCACCTTAAAAGTCCTAAGTGCTATTCAAATGTCCTaGATTAGATACTGTATTTTGCTAGCCTCCTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: FTLKVLSAIQMS*IRYCILLASYP Trigger: AGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTGAATAGCACTTAGGACTTTTAAGGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGACAATGTGTAAGATTCTGCCAGGTGGTATTAATTTTGGCAGTATGAGACACAATAAAGGCAAGTaGACCACACAGTTTATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SMTMCKILPGGINFGSMRHNKGK*TTQFIV Trigger: AACTATAAACTGTGTGGTCAACTTGCCTTTATTGTG...TCTCATACTGCCAAAATTAATACCACCTGGCAGAATCTTACACATTGTCATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | ATTGTTGTTGTTAACTTGACACAAGATATGGTCATCTaGGAAGAGGGAACCTCTATTGAGAAAACAGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IVVVNLTQDMVI*EEGTSIEKTVP Trigger: TGGAACTGTTTTCTCAATAGAGGTTCCCTCTTCTCAGATGACCATATCTTGTGTCAAGTTAACAACAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CCA 72 bp | AATGGCTTTACTTCACTGTGGAGTTTTTCATCGATCTaGTCAGATGTACACTTCATAAAGGTATTCTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: NGFTSLWSFSSI*SDVHFIKVFSL Trigger: CAATGAGAATACCTTTATGAAGTGTACATCTGACCAGATCGATGAAAAACTCCACAGTGAAGTAAAGCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTGGGGTGGGTATTTTCTaGATTAATAATGGACATGTA | + |
|
Preference number: 3 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFGVGIF*INNGHV Trigger: TACATGTCCATTATTAATCAAGAAAATACCCACCCC...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR TCA 72 bp | AAGCCAAAAGAAATCATTTCCTTCCCAAGTTGCTTTTaGTTGTGGTATTTATCACAGGACAAGAAAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KPKEIISFPSCF*LWYLSQDKKAN Trigger: GTTTGCTTTCTTGTCCTGTGATAAATACCACAATCAAAAGCAACTTGGGAAGGAAATGATTTCTTTTGGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CAA 72 bp | AGAAAATCAGTGGGCGGCGCTCTTCCATGGTTTTACTaGAGTTCCTGCTTCCAGAGATGGCCCAGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKSVGGALPWFY*SSCFQRWPSLA Trigger: GGCTAAGCTGGGCCATCTCTGGAAGCAGGAACTCAAGTAAAACCATGGAAGAGCGCCGCCCACTGATTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| CDS-3UTR TCA 90 bp | AGCTATCTCGCGTGGCCCACCCAAACTTTTTCCATACCTCACAATAAAGGCAAGCTTGAGTTTGACCACTaGGGTGCACATCCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SYLAWPTQTFSIPHNKGKLEFDH*GAHPRV Trigger: CACCCTGGGATGTGCACCTCAGTGGTCAAACTCAAG...CTTGCCTTTATTGTGAGGTATGGAAAAAGTTTGGGTGGGCCACGCGAGATAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
||
| 3UTR CAA 72 bp | CGGGATGGAAGGGTTTATGGAGATCATCTGAGATTTTaGTACCGAGTGCCAGGGTTGGAGTTCCTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDGRVYGDHLRF*YRVPGLEFLKK Trigger: TTTCTTCAGGAACTCCAACCCTGGCACTCGGTACAAAAATCTCAGATGATCTCCATAAACCCTTCCATCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| CDS-3UTR CCA 90 bp | AGCTATCTCGCGTGGCCCACCCAAACTTTTTCCATACCTCACAATAAAGGCAAGCTGCTTACACACAAATaGCTTTACTTCACTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SYLAWPTQTFSIPHNKGKLLTHK*LYFTVE Trigger: CTCCACAGTGAAGTAAAGCCATTTGTGTGTAAGCAG...CTTGCCTTTATTGTGAGGTATGGAAAAAGTTTGGGTGGGCCACGCGAGATAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
||
| 3UTR CAA 72 bp | GATTTTGATCAGCACAAAGACCACAAGGGGCTACGGTaGCATTTCAAGTTGGCAGCAAAGCATGACAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: DFDQHKDHKGLR*HFKLAAKHDNV Trigger: CACATTGTCATGCTTTGCTGCCAACTTGAAATGCAACCGTAGCCCCTTGTGGTCTTTGTGCTGATCAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CAA 72 bp | ACAGTTCCAAGTATATCCTTCCTGAAGCTGTGTGCTTaGTTAAAGAGGATGGCCTTCCCTGAAGAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVPSISFLKLCA*LKRMAFPEERN Trigger: GTTCCTCTCTTCAGGGAAGGCCATCCTCTTTAACAAAGCACACAGCTTCAGGAAGGATATACTTGGAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| 3UTR CAA 72 bp | GGACAAGAAAGCAAACTAAAGGAGGCCCACAGGCTATaGCCGTTACAGACTAGCCATGTTGTTTTTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQESKLKEAHRL*PLQTSHVVFGK Trigger: CTTTCCAAAAACAACATGGCTAGTCTGTAACGGCAATAGCCTGTGGGCCTCCTTTAGTTTGCTTTCTTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
||
| CDS-3UTR TCA 90 bp | CTAAGCTATCTCGCGTGGCCCACCCAAACTTTTTCCATACCTCACAATAAAGGCAGGGTGAATTACCAATaGCGTTTCTCACATACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSYLAWPTQTFSIPHNKGRVNYQ*RFSHTN Trigger: GTTTGTATGTGAGAAACGTCATTGGTAATTCACCCT...GCCTTTATTGTGAGGTATGGAAAAAGTTTGGGTGGGCCACGCGAGATAGCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
||
| CDS-3UTR TCA 90 bp | TGGCCCACCCAAACTTTTTCCATACCTCACAATAAAGGCAAGTTGACCACACAGGACTCCTTTGGTGCATaGGAAGGTATTTCAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPTQTFSIPHNKGKLTTQDSFGA*EGISTE Trigger: TTCAGTTGAAATACCTTCTCATGCACCAAAGGAGTC...CTGTGTGGTCAACTTGCCTTTATTGTGAGGTATGGAAAAAGTTTGGGTGGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| 3UTR CAA 72 bp | AGGATGCTAACAGCAATGTGGACAATGGAAGCTGCCTaGTCAAGTTTCAGAGGGATGTCTGAGAGTATAAAG | + |
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Preference number: 4 (lower is better) Translates to: RMLTAMWTMEAA*SSFRGMSESIK Trigger: CTTTATACTCTCAGACATCCCTCTGAAACTTGACAAGGCAGCTTCCATTGTCCACATTGCTGTTAGCATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 72 bp | AGGCCCACAGGCTATTGCCGTTACAGACTAGCCATGTaGTTTTTGGAAAGAAAGCGGAAGTGTTTAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: RPTGYCRYRLAM*FLERKRKCLEL Trigger: AAGTTCTAAACACTTCCGCTTTCTTTCCAAAAACAACATGGCTAGTCTGTAACGGCAATAGCCTGTGGGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| CDS-3UTR TCA 90 bp | CAAATGTCCTGGATTAGATACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAGAATGCCCCAAACGTTTaGAGGCTTTCCCACATTTCT | + |
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Preference number: 4 (lower is better) Translates to: QMSWIRYCILLASYPTCKNAPNV*RLSHIS Trigger: AGAAATGTGGGAAAGCCTTCAAACGTTTGGGGCATT...CTTACAGGTAGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR GCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTGCTTCCACATCCTGTTaGTGCAGGAGGCATGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFASTSC*CRRHVL Trigger: GAGGACATGCCTCCTGCAGCAACAGGATGTGGAAGC...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CCA 90 bp | ATGTGGAACTCAGAAGACAACTTTTGGGAACTCCATGTGAGTTTCAGGGTTAAAGACTGTTTCTGTCACTaGAAGTGGCAAAGGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: MWNSEDNFWELHVSFRVKDCFCH*KWQRLS Trigger: GGAAAGCCTTTGCCACTTCCAGTGACAGAAACAGTC...TTTAACCCTGAAACTCACATGGAGTTCCCAAAAGTTGTCTTCTGAGTTCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| 3UTR CAA 72 bp | CGGATCACAATGGAGGTTTCTATGAGCTGCATCACATaGCTGATTTTCATAGGATTTCTCTCGAGAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: RITMEVSMSCIT*LIFIGFLSRTS Trigger: GGAAGTTCTCGAGAGAAATCCTATGAAAATCAGCAATGTGATGCAGCTCATAGAAACCTCCATTGTGATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| CDS-3UTR GCA 90 bp | CAAATGTCCTGGATTAGATACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAGTTCTCACATACAAACTaGTTCCACATCCTGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: QMSWIRYCILLASYPTCKFSHTN*FHILLL Trigger: CAGCAACAGGATGTGGAAGCAGTTTGTATGTGAGAA...CTTACAGGTAGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR GCA 90 bp | CAAATGTCCTGGATTAGATACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAGAAGGCTTCTCCACACTaGTTACACACAAATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QMSWIRYCILLASYPTCKKASPH*LHTNGF Trigger: AAAGCCATTTGTGTGTAAGCAGTGTGGAGAAGCCTT...CTTACAGGTAGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CCA 90 bp | CCTGTAAGGAAAGCAGATAGACATCAAAATATGTATGGGAACAGGATTTCATCCATCCTCAAAGGTCACTaGTTCCATTTCCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRKADRHQNMYGNRISSILKGH*FHFQLR Trigger: CCGAAGCTGGAAATGGAACCAGTGACCTTTGAGGAT...GGATGAAATCCTGTTCCCATACATATTTTGATGTCTATCTGCTTTCCTTACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CCA 90 bp | ATGTGGAACTCAGAAGACAACTTTTGGGAACTCCATGTGAGTTTCAGGGTTAAATTCTGTCACTGGAAGTaGCAAAGGCTTTCCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: MWNSEDNFWELHVSFRVKFCHWK*QRLSHN Trigger: ATTGTGGGAAAGCCTTTGCCACTTCCAGTGACAGAA...TTTAACCCTGAAACTCACATGGAGTTCCCAAAAGTTGTCTTCTGAGTTCCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| 3UTR CAA 72 bp | AGTGCTATTCAAATGTCCTGGATTAGATACTGTATTTaGCTAGCCTCCTACCCTACCTGTAAGGAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAIQMSWIRYCI*LASYPTCKESR Trigger: TCTGCTTTCCTTACAGGTAGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTGAATAGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR TCA 90 bp | CACAAATACATTCAATGTTGTACATGTGGAACTCAGAAGACAACTTTTGGGAACCCCACAATGTGTGCATaGATATGGCTTGTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HKYIQCCTCGTQKTTFGNPTMCA*IWLVSI Trigger: GATGGAGACAAGCCATATTCATGCACACATTGTGGG...GTTCCCAAAAGTTGTCTTCTGAGTTCCACATGTACAACATTGAATGTATTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR GCA 90 bp | CAAATGTCCTGGATTAGATACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAGTCCATGAACCTGAAATaGCTTAGAATGACCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: QMSWIRYCILLASYPTCKSMNLK*LRMTHI Trigger: GATATGGGTCATTCTAAGGCATTTCAGGTTCATGGA...CTTACAGGTAGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CCA 90 bp | CACAAATACATTCAATGTTGTACATGTGGAACTCAGAAGACAACTTTTGGGAACATCCTCAAAGGTCACTaGTTCCATTTCCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HKYIQCCTCGTQKTTFGNILKGH*FHFQLR Trigger: CCGAAGCTGGAAATGGAACCAGTGACCTTTGAGGAT...GTTCCCAAAAGTTGTCTTCTGAGTTCCACATGTACAACATTGAATGTATTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167107.10 ENSMUST00000174512.4 |
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| CDS-3UTR TCA 90 bp | GTCACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTGGGTTTGTTCACATTaGCAACCACGTTCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTVRFLYRFLMGCRTQKCWVCSH*QPRSHS Trigger: TGAATGTGAACGTGGTTGTCAATGTGAACAAACCCA...GCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR GCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTATACTCCGGACTCTGTaGCTGGGTTTGTTCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFILRTL*LGLFTL Trigger: CAATGTGAACAAACCCAGGCACAGAGTCCGGAGTAT...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR GCA 90 bp | GTCACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCCTTTCCCACAATGTGTaGATGAATATGGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTVRFLYRFLMGCRTQKCLSHNV*MNMACL Trigger: GAGACAAGCCATATTCATGCACACATTGTGGGAAAG...GCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| 3UTR CAA 72 bp | CGAATTGTTACGTCGCATTTTGATGACATTCAGGAATaGCAGAGATGGGATCCTCAAATTCTGAATGATCAC | + |
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Preference number: 4 (lower is better) Translates to: RIVTSHFDDIQE*QRWDPQILNDH Trigger: GTGATCATTCAGAATTTGAGGATCCCATCTCTGCAATTCCTGAATGTCATCAAAATGCGACGTAACAATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 72 bp | ATGCACCACTGGAAAGAAAATCTCTTAGAGAGCGAATaGTTACGTCGCATTTTGATGACATTCAGGAATTGC | + |
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Preference number: 4 (lower is better) Translates to: MHHWKENLLESE*LRRILMTFRNC Trigger: GCAATTCCTGAATGTCATCAAAATGCGACGTAACAATTCGCTCTCTAAGAGATTTTCTTTCCAGTGGTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| 3UTR CAA 72 bp | ACGAATGCTCAGAGTTTAATGATCTGTTTGGGCAACTaGGAATGTAAGGATGCTAACAGCAATGTGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TNAQSLMICLGN*ECKDANSNVDN Trigger: ATTGTCCACATTGCTGTTAGCATCCTTACATTCCAAGTTGCCCAAACAGATCATTAAACTCTGAGCATTCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| CDS-3UTR TCA 90 bp | GTCACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCCAATCACTTGAGTTCTaGGATTTTGGTAGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTVRFLYRFLMGCRTQKCQSLEF*DFGSPL Trigger: AAGAGGACTACCAAAATCTCAGAACTCAAGTGATTG...GCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR GCA 90 bp | CAAATGTCCTGGATTAGATACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAGAAAGTTTTTGTGCAATaGTTACATGTATACGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QMSWIRYCILLASYPTCKKVFVQ*LHVYGF Trigger: GAAGCCGTATACATGTAAGCATTGCACAAAAACTTT...CTTACAGGTAGGGTAGGAGGCTAGCAAAATACAGTATCTAATCCAGGACATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR TCA 90 bp | CCTGTAAGGAAAGCAGATAGACATCAAAATATGTATGGGAACAGGATTTCATCCGATCACCAGAAAGAATaGACACTTTCCCACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVRKADRHQNMYGNRISSDHQKE*TLSHIF Trigger: AAAAATGTGGGAAAGTGTTCATTCTTTCTGGTGATC...GGATGAAATCCTGTTCCCATACATATTTTGATGTCTATCTGCTTTCCTTACAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR TCA 90 bp | ACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCCAGAAATGCTTTGAATCCTCTCGTGCTTaGTTAGATCACCAGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVRFLYRFLMGCRTQKCFESSRA*LDHQKE Trigger: TTCTTTCTGGTGATCTAATCAAGCACGAGAGGATTC...AAAGCATTTCTGGGTCCTACATCCCATTAGAAACCTATATAAAAATCTCACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CCA 90 bp | AAGCAGATAGACATCAAAATATGTATGGGAACAGGATTTCATCCTACATATGCTGGCTTTACTTCACTGTaGAGTTTTTCATCGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQIDIKICMGTGFHPTYAGFTSL*SFSSIW Trigger: CCAGATCGATGAAAAACTCCACAGTGAAGTAAAGCC...AGCATATGTAGGATGAAATCCTGTTCCCATACATATTTTGATGTCTATCTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| 3UTR CAA 72 bp | ACCCAAACTTTTTCCATACCTCACAATAAAGGCAAGTaGACCACACAGTTTATAGTTATACAAGTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTFSIPHNKGK*TTQFIVIQVLS Trigger: TGACAGAACTTGTATAACTATAAACTGTGTGGTCAACTTGCCTTTATTGTGAGGTATGGAAAAAGTTTGGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167107.10 ENSMUST00000174512.4 |
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| 3UTR CAA 72 bp | GGAGCCAAAATAAGTTCTTACTTCCTAAGTTCTATTTaGTCCTGGTGTTTATCTCAGCAAGAAAAAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAKISSYFLSSI*SWCLSQQEKAN Trigger: ATTTGCTTTTTCTTGCTGAGATAAACACCAGGACAAAATAGAACTTAGGAAGTAAGAACTTATTTTGGCTCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| CDS-3UTR CAA 90 bp | TGGCCCACCCAAACTTTTTCCATACCTCACAATAAAGGCAAGTTGACCACACAGTGCTTCCACATCCTGTaGCTGCAGGAGGCATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WPTQTFSIPHNKGKLTTQCFHIL*LQEACP Trigger: AGGACATGCCTCCTGCAGCAACAGGATGTGGAAGCA...CTGTGTGGTCAACTTGCCTTTATTGTGAGGTATGGAAAAAGTTTGGGTGGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CAA 90 bp | TGGCCCACCCAAACTTTTTCCATACCTCACAATAAAGGCAAGTTGACCACACAGCTCAAATGGTTTCTCTaGAGTTTGACCACTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPTQTFSIPHNKGKLTTQLKWFL*SLTTEV Trigger: CACCTCAGTGGTCAAACTCAAGAGAAACCATTTGAG...CTGTGTGGTCAACTTGCCTTTATTGTGAGGTATGGAAAAAGTTTGGGTGGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCTGGAACAGCCAACGAATGCTCAGAGTTTAATGATCTGTTTGGGCAATCTGTAGAGCTTCTTTaGACTGGAATCCAACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSAGTANECSEFNDLFGQSVELL*TGIQQS Trigger: ACTTTGTTGGATTCCAGTCAAAAGAAGCTCTACAGA...TTGCCCAAACAGATCATTAAACTCTGAGCATTCGTTGGCTGTTCCAGCTGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174512.4 |
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| CDS-3UTR CAA 90 bp | TGGCCCACCCAAACTTTTTCCATACCTCACAATAAAGGCAAGTTGACCACACAGTGGCTTGTCTCCATCTaGAATATCTTCATGAACATT | + |
|
Preference number: 5 (lower is better) Translates to: WPTQTFSIPHNKGKLTTQWLVSI*NIFMNI Trigger: AATGTTCATGAAGATATTCAAGATGGAGACAAGCCA...CTGTGTGGTCAACTTGCCTTTATTGTGAGGTATGGAAAAAGTTTGGGTGGGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CAA 90 bp | ATGTGGAACTCAGAAGACAACTTTTGGGAACTCCATGTGAGTTTCAGGGTTAAAAAATGCCCCAAACGTTaGAAGGCTTTCCCACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: MWNSEDNFWELHVSFRVKKCPKR*KAFPHF Trigger: GAAATGTGGGAAAGCCTTCAAACGTTTGGGGCATTT...TTTAACCCTGAAACTCACATGGAGTTCCCAAAAGTTGTCTTCTGAGTTCCACAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CAA 90 bp | CCTCCTACCCTACCTGTAAGGAAAGCAGATAGACATCAAAATATGTATGGGAACTCTGTAGAGCTTCTTTaGACTGGAATCCAACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPTLPVRKADRHQNMYGNSVELL*TGIQQS Trigger: ACTTTGTTGGATTCCAGTCAAAAGAAGCTCTACAGA...GTTCCCATACATATTTTGATGTCTATCTGCTTTCCTTACAGGTAGGGTAGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CAA 90 bp | AATGTTGTACATGTGGAACTCAGAAGACAACTTTTGGGAACTCCATGTGAGTTTCTGGGTTTGTTCACATaGACAACCACGTTCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: NVVHVELRRQLLGTPCEFLGLFT*TTTFTF Trigger: GAATGTGAACGTGGTTGTCAATGTGAACAAACCCAG...AAACTCACATGGAGTTCCCAAAAGTTGTCTTCTGAGTTCCACATGTACAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS-3UTR CAA 90 bp | CACAAATACATTCAATGTTGTACATGTGGAACTCAGAAGACAACTTTTGGGAACATGAGCTGCATCACATaGCTGATTTTCATAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: HKYIQCCTCGTQKTTFGNMSCIT*LIFIGF Trigger: AAATCCTATGAAAATCAGCAATGTGATGCAGCTCAT...GTTCCCAAAAGTTGTCTTCTGAGTTCCACATGTACAACATTGAATGTATTTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167107.10 |
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| CDS TCA 72 bp | GTTCACATTCACCATCTTTCTCAATCACTTGAGTTCTaGGATTTTGGTAGTCCTCTTCAACATTTTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VHIHHLSQSLEF*DFGSPLQHFLL Trigger: GAGAAGAAAATGTTGAAGAGGACTACCAAAATCTCAGAACTCAAGTGATTGAGAAAGATGGTGAATGTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167107.10 ENSMUST00000174417.2 |
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| CDS CAA 72 bp | TTCACCATCTTTCTCAATCACTTGAGTTCTGAGATTTaGGTAGTCCTCTTCAACATTTTCTTCTCGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FTIFLNHLSSEI*VVLFNIFFSCF Trigger: AAAACACGAGAAGAAAATGTTGAAGAGGACTACCAAAATCTCAGAACTCAAGTGATTGAGAAAGATGGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167107.10 ENSMUST00000174417.2 |
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