Pregenerated sensors for ZFP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055835Ensembl transcript IDs: ENSMUST00000077791.8, ENSMUST00000211926.2, ENSMUST00000212072.2, ENSMUST00000212206.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGTTTTCTGCAGCAGCCTGCCTGAGCCTCAGGACTATGCCATGTaGACCCTCTGGTGGACGCTGAGGCGAGACTTCCTGCTGAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: QVFCSSLPEPQDYAM*TLWWTLRRDFLLKA Trigger: AGCCTTCAGCAGGAAGTCTCGCCTCAGCGTCCACCAGAGGGTTCACATGGCATAGTCCTGAGGCTCAGGCAGGCTGCTGCAGAAAACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR GCA 90 bp | TCTTCAGTTGGTGGTTGGTTCTTGATGGTTGTAAGTGACCCCACCTaGCTCTGCAGGTCTCTGGGGTCCCTCTCCACCTGGCCATCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSVGGWFLMVVSDPT*LCRSLGSLSTWPSA Trigger: GGCTGATGGCCAGGTGGAGAGGGACCCCAGAGACCTGCAGAGGCAGGTGGGGTCACTTACAACCATCAAGAACCAACCACCAACTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR GCA 90 bp | CCCTTCACTGAAGAATTCTGGCCTGACAGGTTTTCTGCAGCAGCCTaGCTGAGCCTCAGGACTATGCCATGTGAACCCTCTGGTGGACGC | + |
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Preference number: 1 (lower is better) Translates to: PFTEEFWPDRFSAAA*LSLRTMPCEPSGGR Trigger: GCGTCCACCAGAGGGTTCACATGGCATAGTCCTGAGGCTCAGGCAGGCTGCTGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR TCA 90 bp | TCACTGAAGAATTCTGGCCTGACAGGTTTTCTGCAGCAGCCTGCCTaGGCCTCAGGACTATGCCATGTGAACCCTCTGGTGGACGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SLKNSGLTGFLQQPA*ASGLCHVNPLVDAE Trigger: CTCAGCGTCCACCAGAGGGTTCACATGGCATAGTCCTGAGGCTCAGGCAGGCTGCTGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR CCA 90 bp | TCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAATTCTaGCCTGACAGGTTTTCTGCAGCAGCCTGCCTGAGCCTCAGGACT | + |
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Preference number: 1 (lower is better) Translates to: SFSIFMRASPFTEEF*PDRFSAAACLSLRT Trigger: AGTCCTGAGGCTCAGGCAGGCTGCTGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR TCA 90 bp | GATGGCATCCTTATGGCTGAGAGCCCTTCCGTTTCCATTATATTCTaGGTATTCCAGTCCAGCGTGGGGTTTCTCTTGCTTCAGGTACAG | + |
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Preference number: 1 (lower is better) Translates to: DGILMAESPSVSIIF*VFQSSVGFLLLQVQ Trigger: CTGTACCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATACTCAGAATATAATGGAAACGGAAGGGCTCTCAGCCATAAGGATGCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR CCA 90 bp | GTTAATGTCTTTCCAAAACGACTGCCTCTTTCTTCAGTTGGTGGTTaGTTCTTGATGGTTGTAAGTGACCCCACCTGCCTCTGCAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: VNVFPKRLPLSSVGG*FLMVVSDPTCLCRS Trigger: AGACCTGCAGAGGCAGGTGGGGTCACTTACAACCATCAAGAACCAACCACCAACTGAAGAAAGAGGCAGTCGTTTTGGAAAGACATTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR CCA 90 bp | AGAGCCCTTCCGTTTCCATTATATTCTGAGTATTCCAGTCCAGCGTaGGGTTTCTCTTGCTTCAGGTACAGAAGTGGTTCCCCAAATCCA | + |
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Preference number: 1 (lower is better) Translates to: RALPFPLYSEYSSPA*GFSCFRYRSGSPNP Trigger: TGGATTTGGGGAACCACTTCTGTACCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATACTCAGAATATAATGGAAACGGAAGGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR CCA 90 bp | TTATTTTATATGAGTACACTGTCTCTCTCTTCAGACACCAGAAGGTaGCATAGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: LFYMSTLSLSSDTRR*HRIPLQMVVSHHVV Trigger: AACCACATGGTGGCTCACAACCATCTGTAATGGGATCCTATGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTACTCATATAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCCGGAAGTGCTCTTAACCCTTCAGCATCTTCATaGGGGCTTCCCCCTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: ATMWLLGTELRTSGSALNPSASS*GLPPSL Trigger: CAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGG...GTTAAGAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR CAA 90 bp | GTCTTTCCAAAACGACTGCCTCTTTCTTCAGTTGGTGGTTGGTTCTaGATGGTTGTAAGTGACCCCACCTGCCTCTGCAGGTCTCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: VFPKRLPLSSVGGWF*MVVSDPTCLCRSLG Trigger: CCCCAGAGACCTGCAGAGGCAGGTGGGGTCACTTACAACCATCAAGAACCAACCACCAACTGAAGAAAGAGGCAGTCGTTTTGGAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR-3UTR TCA 90 bp | GTACACTGTCTCTCTCTTCAGACACCAGAAGGTGGCATAGGATCCCATTACAGAGTGGTTGCTGGGAACTaGACTCAGGACCTCCGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VHCLSLQTPEGGIGSHYRVVAGN*TQDLRK Trigger: CTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCAC...TCTGTAATGGGATCCTATGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR-3UTR GCA 90 bp | AACGAGCAGCGACTTGAAGGAGAAGGTCTTGTCACAGTAGTTACAGACAAAAGGGTAAGTGACCCCACCTaGCTCTGCAGGTCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: NEQRLEGEGLVTVVTDKRVSDPT*LCRSLG Trigger: CCCCAGAGACCTGCAGAGGCAGGTGGGGTCACTTAC...CCTTTTGTCTGTAACTACTGTGACAAGACCTTCTCCTTCAAGTCGCTGCTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR-3UTR TCA 90 bp | TATATGAGTACACTGTCTCTCTCTTCAGACACCAGAAGGTGGCATAGGATCCCAGTGGTTGCTGGGAACTaGACTCAGGACCTCCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: YMSTLSLSSDTRRWHRIPVVAGN*TQDLRK Trigger: CTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCAC...TGGGATCCTATGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTACTCATATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAAATCCACCACACCCGTCTCCTTTCTTTCTTACACAGTTTCTACTGCTAAGCCTTCAGCATCTTCATaGGGGCTTCCCCCTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: PKSTTPVSFLSYTVSTAKPSASS*GLPPSL Trigger: CAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGG...CTTAGCAGTAGAAACTGTGTAAGAAAGAAAGGAGACGGGTGTGGTGGATTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCCGGAAGTGCTCTTAACCTTCACTGAAGAATTCTaGCCTGACAGGTTTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PPCGCWELNSGPPEVLLTFTEEF*PDRFSA Trigger: TGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAA...GGTTAAGAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTCCAGCGTGGGGTTTCTCTTGCTTCAGGTACAGAAGTGGTTCCCCAAATCTTCACTGAAGAATTCTaGCCTGACAGGTTTTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: PVQRGVSLASGTEVVPQIFTEEF*PDRFSA Trigger: TGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAA...GATTTGGGGAACCACTTCTGTACCTGAAGCAAGAGAAACCCCACGCTGGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTTTCACTGAAGAATTCTaGCCTGACAGGTTTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ISIEFPKFLQHLHEGFPLFTEEF*PDRFSA Trigger: TGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAA...AAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 ENSMUST00000212206.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCATTATATTCTGAGTATTCCAGTCCAGCGTGGGGTTTCTCTTGCTTCAGGTCTTCAGTTGGTGGTTaGTTCTTGATGGTTGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: FPLYSEYSSPAWGFSCFRSSVGG*FLMVVS Trigger: ACTTACAACCATCAAGAACCAACCACCAACTGAAGA...CCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATACTCAGAATATAATGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR TCA 72 bp | TGCAGCAGCCTGCCTGAGCCTCAGGACTATGCCATGTaGACCCTCTGGTGGACGCTGAGGCGAGACTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: CSSLPEPQDYAM*TLWWTLRRDFL Trigger: CAGGAAGTCTCGCCTCAGCGTCCACCAGAGGGTTCACATGGCATAGTCCTGAGGCTCAGGCAGGCTGCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAACTGAACTCAGGACCTCCGGAAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DPITDGCEPPCG*WELNSGPPEVL Trigger: GAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR TCA 72 bp | CCAGAAGGTGGCATAGGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAACTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEGGIGSHYRWL*ATMWLLGTELR Trigger: CCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCTATGCCACCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAACTGAACTCAGGACCTCCGGAAGTGCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*ELNSGPPEVLL Trigger: TAAGAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR CCA 72 bp | TCCAGCGTGGGGTTTCTCTTGCTTCAGGTACAGAAGTaGTTCCCCAAATCCACCACACCCGTCTCCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: SSVGFLLLQVQK*FPKSTTPVSFL Trigger: AAGAAAGGAGACGGGTGTGGTGGATTTGGGGAACCACTTCTGTACCTGAAGCAAGAGAAACCCCACGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR CCA 72 bp | ATGAGTACACTGTCTCTCTCTTCAGACACCAGAAGGTaGCATAGGATCCCATTACAGATGGTTGTGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: MSTLSLSSDTRR*HRIPLQMVVSH Trigger: GTGGCTCACAACCATCTGTAATGGGATCCTATGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| 3UTR CCA 72 bp | TTTCCAAAACGACTGCCTCTTTCTTCAGTTGGTGGTTaGTTCTTGATGGTTGTAAGTGACCCCACCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: FPKRLPLSSVGG*FLMVVSDPTCL Trigger: GAGGCAGGTGGGGTCACTTACAACCATCAAGAACCAACCACCAACTGAAGAAAGAGGCAGTCGTTTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR TCA 72 bp | CTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATaGGGGCTTCCCCCTTCACTGAAGAATTCTGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LNRISQVPSASS*GLPPSLKNSGL Trigger: CAGGCCAGAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 ENSMUST00000212206.2 |
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| 3UTR CCA 72 bp | CCGTTTCCATTATATTCTGAGTATTCCAGTCCAGCGTaGGGTTTCTCTTGCTTCAGGTACAGAAGTGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: PFPLYSEYSSPA*GFSCFRYRSGS Trigger: GGAACCACTTCTGTACCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATACTCAGAATATAATGGAAACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| 3UTR-3UTR CAA 90 bp | TATATTCTGAGTATTCCAGTCCAGCGTGGGGTTTCTCTTGCTTCAGGTACAGAATTCTTCAGTTGGTGGTaGGTTCTTGATGGTTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: YILSIPVQRGVSLASGTEFFSWW*VLDGCK Trigger: CTTACAACCATCAAGAACCAACCACCAACTGAAGAA...TTCTGTACCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATACTCAGAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| CDS-3UTR GCA 90 bp | ACTGAAGAATTCTGGCCTGACAGGTTTTCTGCAGCAGCCTGCCTGAGCCTCAGGGTAAGTGACCCCACCTaGCTCTGCAGGTCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TEEFWPDRFSAAACLSLRVSDPT*LCRSLG Trigger: CCCCAGAGACCTGCAGAGGCAGGTGGGGTCACTTAC...CCTGAGGCTCAGGCAGGCTGCTGCAGAAAACCTGTCAGGCCAGAATTCTTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR TCA 90 bp | GGTGGTTGGTTCTTGATGGTTGTAAGTGACCCCACCTGCCTCTGCAGGTCTCTGAGTTACATCAGTGAATaGAACGGATCCCTGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GGWFLMVVSDPTCLCRSLSYISE*NGSLGP Trigger: GGGTCCCAGGGATCCGTTTCATTCACTGATGTAACT...CAGAGACCTGCAGAGGCAGGTGGGGTCACTTACAACCATCAAGAACCAACCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| CDS-3UTR TCA 90 bp | CCCTTCACTGAAGAATTCTGGCCTGACAGGTTTTCTGCAGCAGCCTGCCTGAGCCCACAGTTACATCAGTaGATGAAACGGATCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PFTEEFWPDRFSAAACLSPQLHQ*MKRIPG Trigger: CCCAGGGATCCGTTTCATTCACTGATGTAACTGTGG...GCTCAGGCAGGCTGCTGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212206.2 |
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| CDS-3UTR TCA 90 bp | CCCTTCACTGAAGAATTCTGGCCTGACAGGTTTTCTGCAGCAGCCTGCCTGAGCGTGAACGATGAGGTTTaGCTGGTGGGTAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PFTEEFWPDRFSAAACLSVNDEV*LVGKGL Trigger: AAGGCCTTTACCCACCAGTCAAACCTCATCGTTCAC...GCTCAGGCAGGCTGCTGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | GCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCCGGAAGTGCTCTTAACTATTCCAGTCCAGCGTaGGGTTTCTCTTGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ATMWLLGTELRTSGSALNYSSPA*GFSCFR Trigger: CCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATA...GTTAAGAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAATTCTGGCCTGACATGTACAGAATCCTCTaGGAGGGGTCCAGTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SFSIFMRASPFTEEFWPDMYRIL*EGSSCS Trigger: GGAGCAACTGGACCCCTCGCAGAGGATTCTGTACAT...GTCAGGCCAGAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212206.2 |
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| CDS-3UTR GCA 90 bp | AATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAAGTAAGTGACCCCACCTaGCTCTGCAGGTCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NFPSSFSIFMRASPFTEEVSDPT*LCRSLG Trigger: CCCCAGAGACCTGCAGAGGCAGGTGGGGTCACTTAC...TTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACTGAACTCAATGTACAGAATCCTCTaGGAGGGGTCCAGTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DPITDGCEPPCGCWELNSMYRIL*EGSSCS Trigger: GGAGCAACTGGACCCCTCGCAGAGGATTCTGTACAT...TGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077791.8 |
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| CDS-3UTR GCA 90 bp | TCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAATTCTGGCCTGACGCGTGGGGTTTCTCTTaGTTCAGGTACAGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SFSIFMRASPFTEEFWPDAWGFS*FRYRSG Trigger: ACCACTTCTGTACCTGAAGCAAGAGAAACCCCACGC...GTCAGGCCAGAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| 3UTR CAA 72 bp | AAACGACTGCCTCTTTCTTCAGTTGGTGGTTGGTTCTaGATGGTTGTAAGTGACCCCACCTGCCTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KRLPLSSVGGWF*MVVSDPTCLCR Trigger: CCTGCAGAGGCAGGTGGGGTCACTTACAACCATCAAGAACCAACCACCAACTGAAGAAAGAGGCAGTCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212206.2 |
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| CDS-3UTR GCA 90 bp | ATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTACTTCCCGCACTCGCTaGACTCGTAGCGTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ISIEFPKFLQHLHEGFPLTSRTR*TRSVSP Trigger: GGGAGAAACGCTACGAGTGCAGCGAGTGCGGGAAGT...AAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | TACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCACTTCCCGCACTCGCTaGACTCGTAGCGTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: YISIEFPKFLQHLHEGFPTSRTR*TRSVSP Trigger: GGGAGAAACGCTACGAGTGCAGCGAGTGCGGGAAGT...GGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR TCA 90 bp | GTACACTGTCTCTCTCTTCAGACACCAGAAGGTGGCATAGGATCCCATTACAGAAGTTACATCAGTGAATaGAACGGATCCCTGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: VHCLSLQTPEGGIGSHYRSYISE*NGSLGP Trigger: GGGTCCCAGGGATCCGTTTCATTCACTGATGTAACT...TCTGTAATGGGATCCTATGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077791.8 |
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| CDS-3UTR CCA 90 bp | GAGCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCCGGAAGTGCTCTTATCTTCAGTTGGTGGTTaGTTCTTGATGGTTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: EPPCGCWELNSGPPEVLLSSVGG*FLMVVS Trigger: ACTTACAACCATCAAGAACCAACCACCAACTGAAGA...TAAGAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAATTCTATTCCAGTCCAGCGTaGGGTTTCTCTTGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: FPSSFSIFMRASPFTEEFYSSPA*GFSCFR Trigger: CCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATA...GAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR TCA 90 bp | CCCTTCACTGAAGAATTCTGGCCTGACAGGTTTTCTGCAGCAGCCTGCCTGAGCTTACAGACAAAAGGCTaGACCAAGCTCTTAATTTTC | + |
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Preference number: 4 (lower is better) Translates to: PFTEEFWPDRFSAAACLSLQTKG*TKLLIF Trigger: GAAAATTAAGAGCTTGGTTCAGCCTTTTGTCTGTAA...GCTCAGGCAGGCTGCTGCAGAAAACCTGTCAGGCCAGAATTCTTCAGTGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR TCA 90 bp | TTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAATTCGTGAGTTCAAACTTCTaGGCGAATGTCTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: FPSSFSIFMRASPFTEEFVSSNF*ANVFPH Trigger: GTGTGGGAAGACATTCGCTCAGAAGTTTGAACTCAC...GAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR TCA 90 bp | GTACACTGTCTCTCTCTTCAGACACCAGAAGGTGGCATAGGATCCCATTACAGAGTGAGTTCAAACTTCTaGGCGAATGTCTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: VHCLSLQTPEGGIGSHYRVSSNF*ANVFPH Trigger: GTGTGGGAAGACATTCGCTCAGAAGTTTGAACTCAC...TCTGTAATGGGATCCTATGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | AATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAAGCGTGGGGTTTCTCTTaGTTCAGGTACAGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NFPSSFSIFMRASPFTEEAWGFS*FRYRSG Trigger: ACCACTTCTGTACCTGAAGCAAGAGAAACCCCACGC...TTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | CCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCCGGAAGTGCTCTTAACCCTTAAAGAAGGTTTTTaGGCATTCGTTACACTCGTA | + |
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Preference number: 4 (lower is better) Translates to: PPCGCWELNSGPPEVLLTLKEGF*AFVTLV Trigger: TACGAGTGTAACGAATGCGCAAAAACCTTCTTTAAG...GGTTAAGAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | GATTACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCACTTCCCGCACTCGCTaGACTCGTAGCGTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: DYISIEFPKFLQHLHEGFTSRTR*TRSVSP Trigger: GGGAGAAACGCTACGAGTGCAGCGAGTGCGGGAAGT...GAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACTGAACTCAGCCTCTTTCTTCAGTTaGTGGTTGGTTCTTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: DPITDGCEPPCGCWELNSASFFS*WLVLDG Trigger: ACCATCAAGAACCAACCACCAACTGAAGAAAGAGGC...TGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | ATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTATGAGCTGCGAGTTCTaGATGAAGGACTTCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: ISIEFPKFLQHLHEGFPLMSCEF*MKDFPH Trigger: GTGCGGGAAGTCCTTCATCCAGAACTCGCAGCTCAT...AAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR TCA 90 bp | TACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCCACAGTTACATCAGTaGATGAAACGGATCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: YISIEFPKFLQHLHEGFPPQLHQ*MKRIPG Trigger: CCCAGGGATCCGTTTCATTCACTGATGTAACTGTGG...GGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212206.2 |
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| CDS-3UTR TCA 90 bp | TACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCGTGAACGATGAGGTTTaGCTGGTGGGTAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YISIEFPKFLQHLHEGFPVNDEV*LVGKGL Trigger: AAGGCCTTTACCCACCAGTCAAACCTCATCGTTCAC...GGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAATTCGCCTCTTTCTTCAGTTaGTGGTTGGTTCTTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: FPSSFSIFMRASPFTEEFASFFS*WLVLDG Trigger: ACCATCAAGAACCAACCACCAACTGAAGAAAGAGGC...GAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | ATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTTATTCCAGTCCAGCGTaGGGTTTCTCTTGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISIEFPKFLQHLHEGFPLYSSPA*GFSCFR Trigger: CCTGAAGCAAGAGAAACCCCACGCTGGACTGGAATA...AAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | GATTACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCATGTACAGAATCCTCTaGGAGGGGTCCAGTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DYISIEFPKFLQHLHEGFMYRIL*EGSSCS Trigger: GGAGCAACTGGACCCCTCGCAGAGGATTCTGTACAT...GAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212206.2 |
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| CDS-3UTR CCA 90 bp | AATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAAGCCTCTTTCTTCAGTTaGTGGTTGGTTCTTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: NFPSSFSIFMRASPFTEEASFFS*WLVLDG Trigger: ACCATCAAGAACCAACCACCAACTGAAGAAAGAGGC...TTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | GATTACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCGCGTGGGGTTTCTCTTaGTTCAGGTACAGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: DYISIEFPKFLQHLHEGFAWGFS*FRYRSG Trigger: ACCACTTCTGTACCTGAAGCAAGAGAAACCCCACGC...GAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR TCA 90 bp | GATTACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCGTGAGTTCAAACTTCTaGGCGAATGTCTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: DYISIEFPKFLQHLHEGFVSSNF*ANVFPH Trigger: GTGTGGGAAGACATTCGCTCAGAAGTTTGAACTCAC...GAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | ATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCCCCTTTCTTCAGTTGGTGGTTaGTTCTTGATGGTTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: ISIEFPKFLQHLHEGFPLSSVGG*FLMVVS Trigger: ACTTACAACCATCAAGAACCAACCACCAACTGAAGA...AAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | GATTACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCTCTTTCTTCAGTTGGTaGTTGGTTCTTGATGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: DYISIEFPKFLQHLHEGFSFFSW*LVLDGC Trigger: ACAACCATCAAGAACCAACCACCAACTGAAGAAAGA...GAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR GCA 90 bp | GATTACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCCTTAAAGAAGGTTTTTaGGCATTCGTTACACTCGTA | + |
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Preference number: 4 (lower is better) Translates to: DYISIEFPKFLQHLHEGFLKEGF*AFVTLV Trigger: TACGAGTGTAACGAATGCGCAAAAACCTTCTTTAAG...GAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | TTATTTATTTTATATGAGTACACTGTCTCTCTCTTCAGACACCAGAAGGTGGCATCTTCAGTTGGTGGTTaGTTCTTGATGGTTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: LFILYEYTVSLFRHQKVASSVGG*FLMVVS Trigger: ACTTACAACCATCAAGAACCAACCACCAACTGAAGA...TGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTACTCATATAAAATAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR CCA 90 bp | TTATTTATTTTATATGAGTACACTGTCTCTCTCTTCAGACACCAGAAGGTGGCATCTTTCTTCAGTTGGTaGTTGGTTCTTGATGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LFILYEYTVSLFRHQKVASFFSW*LVLDGC Trigger: ACAACCATCAAGAACCAACCACCAACTGAAGAAAGA...TGCCACCTTCTGGTGTCTGAAGAGAGAGACAGTGTACTCATATAAAATAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR CAA 90 bp | CTGGGAACTGAACTCAGGACCTCCGGAAGTGCTCTTAACCGCCGAGCCATCTCTTTCTTCAGTTGGTGGTaGGTTCTTGATGGTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: LGTELRTSGSALNRRAISFFSWW*VLDGCK Trigger: CTTACAACCATCAAGAACCAACCACCAACTGAAGAA...AGAGATGGCTCGGCGGTTAAGAGCACTTCCGGAGGTCCTGAGTTCAGTTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077791.8 ENSMUST00000212072.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCAGCATCTTCATGAGGGCTTCCCCCTTCACTGAAGAATTCTGGCCTGACTTCTTCAGTTGGTGGTaGGTTCTTGATGGTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: SFSIFMRASPFTEEFWPDFFSWW*VLDGCK Trigger: CTTACAACCATCAAGAACCAACCACCAACTGAAGAA...GTCAGGCCAGAATTCTTCAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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| CDS-3UTR CAA 90 bp | GATTACATCTCAATAGAATTTCCCAAGTTCCTTCAGCATCTTCATGAGGGCTTCTTCTTCAGTTGGTGGTaGGTTCTTGATGGTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: DYISIEFPKFLQHLHEGFFFSWW*VLDGCK Trigger: CTTACAACCATCAAGAACCAACCACCAACTGAAGAA...GAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTCTATTGAGATGTAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077791.8 ENSMUST00000211926.2 ENSMUST00000212072.2 |
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