RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFHX4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025255

Ensembl transcript IDs: ENSMUST00000026284.13, ENSMUST00000175866.8, ENSMUST00000176175.2, ENSMUST00000176383.3

Found 1055 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGCTCAAGAGTCCCTCTGTGGTAAAACTGTACTACCCTGCGGCTTaGGTGCAGGAAGCTGTGCGGTGTCCGGTAAGGGTTAGAAAGTTT +
Preference number: 1 (lower is better)
Translates to: LLKSPSVVKLYYPAA*VQEAVRCPVRVRKF
Trigger: AAACTTTCTAACCCTTACCGGACACCGCACAGCTTCCTGCACTCAAGCCGCAGGGTAGTACAGTTTTACCACAGAGGGACTCTTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR TCA 90 bp CGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTaGGAGGCGTTCTGTTCCATGCTAACACACTGTTGCACATTGTGT +
Preference number: 1 (lower is better)
Translates to: RHTVGSSFVKRSFVL*EAFCSMLTHCCTLC
Trigger: ACACAATGTGCAACAGTGTGTTAGCATGGAACAGAACGCCTCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CCA 90 bp AAGTGCCCAGAGTATGAATGGAAGTACAATAACCTATCCACTAATTaGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAG +
Preference number: 1 (lower is better)
Translates to: KCPEYEWKYNNLSTN*QCIGISLNSVLRAQ
Trigger: CTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCAATTAGTGGATAGGTTATTGTACTTCCATTCATACTCTGGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGACCCTGCGGCTTGAGTaGAGGAAGCTGTGCGGTGTC +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVTLRLE*RKLCGV
Trigger: GACACCGCACAGCTTCCTGCACTCAAGCCGCAGGGT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 90 bp TGTGTCAAGACAAACTGCAATACACAGGGCAGACACGTGACTCCATaGCTCAAGAGTCCCTCTGTGGTAAAACTGTACTACCCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: CVKTNCNTQGRHVTP*LKSPSVVKLYYPAA
Trigger: AGCCGCAGGGTAGTACAGTTTTACCACAGAGGGACTCTTGAGCAATGGAGTCACGTGTCTGCCCTGTGTATTGCAGTTTGTCTTGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGCGCATTCAACCACCTaGATTAGTCTTCTTCACCAC +
Preference number: 2 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPAHSTT*ISLLHH
Trigger: GTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACACCCTGCGGCTTGAGTaGAGGAAGCTGTGCGGTGTC +
Preference number: 2 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNTLRLE*RKLCGV
Trigger: GACACCGCACAGCTTCCTGCACTCAAGCCGCAGGGT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGACCAAACTGTTGCTaGACTACACACAAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRPNCC*TTHKER
Trigger: CCTTTCTTTGTGTGTAGTGCAGCAACAGTTTGGTCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAACTGGGAGGTGGAAATaGGGCCTCATGGCAAGCAAA +
Preference number: 2 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRTGRWK*GLMASK
Trigger: TTTGCTTGCCATGAGGCCCCATTTCCACCTCCCAGT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 90 bp GTCCTTTGTTTTGTGAGAGGCGTTCTGTTCCATGCTAACACACTGTaGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCT +
Preference number: 2 (lower is better)
Translates to: VLCFVRGVLFHANTL*HIVLTARTDRSHNA
Trigger: AGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGTGTGTTAGCATGGAACAGAACGCCTCTCACAAAACAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGAATTCAGTCCTACGTaGGCAGGGCTATCCTCTTTA +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVEFSPT*AGLSSL
Trigger: TAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGCGCATTCAACCACCTaGATTAGTCTTCTTCACCAC +
Preference number: 2 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRAHSTT*ISLLHH
Trigger: GTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGCACATTGTGTTAACTaGCAGGACAGATCGATCTCA +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVAHCVN*QDRSIS
Trigger: TGAGATCGATCTGTCCTGGCAGTTAACACAATGTGC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGTCTTGAGAGTTTTTaGCTTGAAACAAGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPCLESF*LETSSQ
Trigger: TTGGGAACTTGTTTCAAGCCAAAAACTCTCAAGACA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTAATGTCCTGTTCATATaGTCCTCAGAGTCTATCAAA +
Preference number: 2 (lower is better)
Translates to: LLHIVLTARTDRSHNAAANVLFI*SSESIK
Trigger: TTTGATAGACTCTGAGGATCATATGAACAGGACATT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGTGTCAAGACAAACTaGAATACACAGGGCAGACAC +
Preference number: 2 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRCVKTN*NTQGRH
Trigger: GTGTCTGCCCTGTGTATTGCAGTTTGTCTTGACACA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTACAAAATGATAAGTaGACTAGAGTTCAGACACAA +
Preference number: 2 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLQNDK*TRVQTQ
Trigger: TTGTGTCTGAACTCTAGTGCACTTATCATTTTGTAG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTGCAGACCAAACTGTTaGTGCACTACACACAAAGAA +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVCRPNC*CTTHKE
Trigger: TTCTTTGTGTGTAGTGCAGCAACAGTTTGGTCTGCA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 90 bp GGCTTTATTAAAACCTCAGGGTGCATTTCCTATGTAACCCAGGCATaGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGATAATC +
Preference number: 2 (lower is better)
Translates to: GFIKTSGCISYVTQA*SVHVVVDNDCAVII
Trigger: GATTATCACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATAGGAAATGCACCCTGAGGTTTTAATAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATCTACAAGAAAGGGATaGCACTGGTGTAAAAACAGC +
Preference number: 2 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRSTRKG*HWCKNS
Trigger: GCTGTTTTTACACCAGTGTCATCCCTTTCTTGTAGA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTACACTTCTAACAAATaGAGACCAAACTGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVYTSNK*RPNCCC
Trigger: GCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAGATCGATCTCACAATaGTGCTGCTTAACATTCATG +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVRSISQ*CCLTFM
Trigger: CATGAATGTTAAGCAGCAGCATTGTGAGATCGATCT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTCTACAAGAAAGGGATaGCACTGGTGTAAAAACAGC +
Preference number: 2 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISTRKG*HWCKNS
Trigger: GCTGTTTTTACACCAGTGTCATCCCTTTCTTGTAGA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAATGTCCTGTTCATATaGTCCTCAGAGTCTATCAAA +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVNVLFI*SSESIK
Trigger: TTTGATAGACTCTGAGGATCATATGAACAGGACATT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAACAGTTGCATTACATaGTACTGGTTCATCTCAGAA +
Preference number: 2 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVNSCIT*YWFISE
Trigger: TTCTGAGATGAACCAGTAGCATGTAATGCAACTGTT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCATACTGTCCATGCTaGCATTTTGAAATCAACCCA +
Preference number: 2 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPYCPC*HFEINP
Trigger: TGGGTTGATTTCAAAATGCCAGCATGGACAGTATGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACACAAGCAAGTACCTTaGCAAGATAGCATTAAATTC +
Preference number: 2 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRHKQVP*QDSIKF
Trigger: GAATTTAATGCTATCTTGTCAAGGTACTTGCTTGTG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTACGAAACACAAAAGTaGTTCCGAAAACACCCTTTG +
Preference number: 2 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNYETQK*FRKHPL
Trigger: CAAAGGGTGTTTTCGGAATCACTTTTGTGTTTCGTA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCATACCATCCTATATTaGCAGCATATCAATATGGGA +
Preference number: 2 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQHTILY*QHINMG
Trigger: TCCCATATTGATATGCTGGCAATATAGGATGGTATG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATCGATCTCACAATGCTaGTGCTTAACATTCATGAAA +
Preference number: 2 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRSISQC*CLTFMK
Trigger: TTTCATGAATGTTAAGCAGCAGCATTGTGAGATCGA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCATACCATCCTATATTaGCAGCATATCAATATGGGA +
Preference number: 2 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNHTILY*QHINMG
Trigger: TCCCATATTGATATGCTGGCAATATAGGATGGTATG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTAAAGCAGCTTCTTTaGTTTCCCGAGAAGCAAATA +
Preference number: 2 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQILKQLL*FPEKQI
Trigger: TATTTGCTTCTCGGGAAAGCAAAGAAGCTGCTTTAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAACAGTTGCATTACATaGTACTGGTTCATCTCAGAA +
Preference number: 2 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNNSCIT*YWFISE
Trigger: TTCTGAGATGAACCAGTAGCATGTAATGCAACTGTT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCCTGAGTCAATCATTTaGTACTGTAATTTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQPESII*YCNFWV
Trigger: AACCCAAAAATTACAGTACCAAATGATTGACTCAGG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTGTCTTGAGAGTTTTTaGCTTGAAACAAGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LLGVTLLTNADQTVAALHCLESF*LETSSQ
Trigger: TTGGGAACTTGTTTCAAGCCAAAAACTCTCAAGACA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 90 bp ATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCCTATATaGCCAGCATATCAATATGGGAAAAACAATCCTGAGTCAATCATT +
Preference number: 2 (lower is better)
Translates to: IQPPALVFFTTYHPI*PAYQYGKNNPESII
Trigger: AATGATTGACTCAGGATTGTTTTTCCCATATTGATATGCTGGCAATATAGGATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGTTAGAAAGTTTCTTTaGACACTAAACACACCTAGA +
Preference number: 2 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNVRKFL*TLNTPR
Trigger: TCTAGGTGTGTTTAGTGTGCAAAGAAACTTTCTAAC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCCTGAGTCAATCATTTaGTACTGTAATTTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIPESII*YCNFWV
Trigger: AACCCAAAAATTACAGTACCAAATGATTGACTCAGG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR TCA 72 bp AGTCCCTCTGTGGTAAAACTGTACTACCCTGCGGCTTaGGTGCAGGAAGCTGTGCGGTGTCCGGTAAGGGTT +
Preference number: 3 (lower is better)
Translates to: SPSVVKLYYPAA*VQEAVRCPVRV
Trigger: AACCCTTACCGGACACCGCACAGCTTCCTGCACTCAAGCCGCAGGGTAGTACAGTTTTACCACAGAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGTCCATGCTGGCATTTaGAAATCAACCCAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVVHAGI*KSTQLR
Trigger: CCTCAGCTGGGTTGATTTCAAAATGCCAGCATGGAC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAACTATAGCGGCAGGATaGCACCTTAGGAGGCCATGT +
Preference number: 3 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRTIAAG*HLRRPC
Trigger: ACATGGCCTCCTAAGGTGCAATCCTGCCGCTATAGT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR GCA 72 bp GACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTaGAATACACAGGGCAGACACGTGACTCCATTGCTC +
Preference number: 3 (lower is better)
Translates to: DTGVKTACVKTN*NTQGRHVTPLL
Trigger: GAGCAATGGAGTCACGTGTCTGCCCTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGTCCATGCTGGCATTTaGAAATCAACCCAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQVHAGI*KSTQLR
Trigger: CCTCAGCTGGGTTGATTTCAAAATGCCAGCATGGAC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR TCA 72 bp GTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTaGGAGGCGTTCTGTTCCATGCTAACACACTGTTGC +
Preference number: 3 (lower is better)
Translates to: VGSSFVKRSFVL*EAFCSMLTHCC
Trigger: GCAACAGTGTGTTAGCATGGAACAGAACGCCTCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGTTTTACCAGGCTTCTaGCTGCTTTTAACAAATGAG +
Preference number: 3 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAVLPGF*LLLTNE
Trigger: CTCATTTGTTAAAAGCAGCAAGAAGCCTGGTAAAAC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGTTTTACCAGGCTTCTaGCTGCTTTTAACAAATGAG +
Preference number: 3 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCVLPGF*LLLTNE
Trigger: CTCATTTGTTAAAAGCAGCAAGAAGCCTGGTAAAAC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTCCGAAAACACCCTTaGACAGCTTTCACATTCTTT +
Preference number: 3 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCFRKHP*TAFTFF
Trigger: AAAGAATGTGAAAGCTGTCAAAGGGTGTTTTCGGAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCTTAAAGCAGCTTCTTaGCTTTCCCGAGAAGCAAAT +
Preference number: 3 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVLKAAS*LSREAN
Trigger: ATTTGCTTCTCGGGAAAGCAAAGAAGCTGCTTTAAG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR GCA 72 bp AGTTATAGCCATAGGGGCTTTATTAAAACCTCAGGGTaGATTTCCTATGTAACCCAGGCATTGAGTGTACAC +
Preference number: 3 (lower is better)
Translates to: SYSHRGFIKTSG*ISYVTQALSVH
Trigger: GTGTACACTCAATGCCTGGGTTACATAGGAAATGCACCCTGAGGTTTTAATAAAGCCCCTATGGCTATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAGTGGGAAGGTAGAGTaGGCACAGATTATTAGTATA +
Preference number: 3 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVSGKVE*AQIISI
Trigger: TATACTAATAATCTGTGCCAACTCTACCTTCCCACT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTTAAAGCAGCTTCTTaGCTTTCCCGAGAAGCAAAT +
Preference number: 3 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLKAAS*LSREAN
Trigger: ATTTGCTTCTCGGGAAAGCAAAGAAGCTGCTTTAAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCATGCTAACACACTGTaGCACATTGTGTTAACTGCC +
Preference number: 3 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNHANTL*HIVLTA
Trigger: GGCAGTTAACACAATGTGCAACAGTGTGTTAGCATG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR TCA 72 bp AACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATaGTTGCGCTGTGATAATCCCTTTGATATCCAAGAA +
Preference number: 3 (lower is better)
Translates to: NPGIECTRCCRQ*LRCDNPFDIQE
Trigger: TTCTTGGATATCAAAGGGATTATCACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR GCA 72 bp GCTGTGCGGTGTCCGGTAAGGGTTAGAAAGTTTCTTTaGACACTAAACACACCTAGAAAATGCTTTCTAATA +
Preference number: 3 (lower is better)
Translates to: AVRCPVRVRKFL*TLNTPRKCFLI
Trigger: TATTAGAAAGCATTTTCTAGGTGTGTTTAGTGTGCAAAGAAACTTTCTAACCCTTACCGGACACCGCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR GCA 72 bp GGTCTTTGGGTTGTTAGGAGTTACACTTCTAACAAATaGAGACCAAACTGTTGCTGCACTACACACAAAGAA +
Preference number: 3 (lower is better)
Translates to: GLWVVRSYTSNK*RPNCCCTTHKE
Trigger: TTCTTTGTGTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAACCCAAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTGGGTTAGAGAAGCTTaGGAACTGCAGTTAAAGTCT +
Preference number: 3 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNWVREA*ELQLKS
Trigger: AGACTTTAACTGCAGTTCCAAAGCTTCTCTAACCCA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGGTGTAAAAACAGCTaGTGTCAAGACAAACTGCAA +
Preference number: 3 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRWCKNS*CQDKLQ
Trigger: TTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTGGGTTAGAGAAGCTTaGGAACTGCAGTTAAAGTCT +
Preference number: 3 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHWVREA*ELQLKS
Trigger: AGACTTTAACTGCAGTTCCAAAGCTTCTCTAACCCA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTGGTGTAAAAACAGCTaGTGTCAAGACAAACTGCAA +
Preference number: 3 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIWCKNS*CQDKLQ
Trigger: TTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAGTGGGAAGGTAGAGTaGGCACAGATTATTAGTATA +
Preference number: 3 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSGKVE*AQIISI
Trigger: TATACTAATAATCTGTGCCAACTCTACCTTCCCACT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CCA 72 bp GAGTATGAATGGAAGTACAATAACCTATCCACTAATTaGCAGTGTATAGGGATATCACTGAATTCAGTCCTA +
Preference number: 3 (lower is better)
Translates to: EYEWKYNNLSTN*QCIGISLNSVL
Trigger: TAGGACTGAATTCAGTGATATCCCTATACACTGCCAATTAGTGGATAGGTTATTGTACTTCCATTCATACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAACATACCATCCTATATaGCCAGCATATCAATATGGG +
Preference number: 3 (lower is better)
Translates to: AASLLSREANIPFHNFCSTYHPI*PAYQYG
Trigger: CCCATATTGATATGCTGGCAATATAGGATGGTATGT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CCA 72 bp AACAATCCTGAGTCAATCATTTGGTACTGTAATTTTTaGGTTAGAGAAGCTTTGGAACTGCAGTTAAAGTCT +
Preference number: 3 (lower is better)
Translates to: NNPESIIWYCNF*VREALELQLKS
Trigger: AGACTTTAACTGCAGTTCCAAAGCTTCTCTAACCCAAAAATTACAGTACCAAATGATTGACTCAGGATTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 72 bp GAGTCCCTCTGTGGTAAAACTGTACTACCCTGCGGCTaGAGTGCAGGAAGCTGTGCGGTGTCCGGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: ESLCGKTVLPCG*SAGSCAVSGKG
Trigger: ACCCTTACCGGACACCGCACAGCTTCCTGCACTCAAGCCGCAGGGTAGTACAGTTTTACCACAGAGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGAGGTTGTCCTCCTCTaGTGGCAGGCCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPEVVLL*WQALLV
Trigger: CACCAGCAAGGCCTGCCATCAGAGGAGGACAACCTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCAGCTGTGGGGGAAGTaGAGGGTGCTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCQLWGK*RVLHWL
Trigger: CAGCCAGTGCAGCACCCTGCACTTCCCCCACAGCTG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGAGGCGGTGGAGGAGTaGGTGGTGGAGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCEAVEE*VVELAE
Trigger: CTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCTTGGGCGGCTGTGTTaGAGGCTGGGGTATGGACGC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALGRLC*RLGYGR
Trigger: GCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTGGAGCTCTGCGGCTaGTCGCCCTCGCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALELCG*SPSPLA
Trigger: AGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCCTTTGGCATGTGGGTaGTCCCCAGCGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAPLACG*SPAAVL
Trigger: CAGAACAGCCGCTGGGGATCACCCACATGCCAAAGG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTGAGTGAGATCTGCTaGGAGGGTGTCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLSEIC*EGVHLG
Trigger: CCCCAGATGGACACCCTCTCAGCAGATCTCACTCAG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTCCCCGGGCAAGCCTaGGATGAGGTTGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLPGQA*DEVVQS
Trigger: AGACTGGACAACCTCATCCCAGGCTTGCCCGGGGAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCAGCTCTCCAAGTCCTaGTGCCAGAGCCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCQLSKS*CQSRCC
Trigger: ACAGCAGCGGCTCTGGCACCAGGACTTGGAGAGCTG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCAGTGGGTTCACTTTTaGCAGGGCACCCCACATTCG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPQWVHF*QGTPHS
Trigger: CGAATGTGGGGTGCCCTGTCAAAAGTGAACCCACTG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCGCTCGCTGTTCACATaGACACTTAGAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRSLFT*TLRASR
Trigger: CCTGGAGGCTCTAAGTGTGCATGTGAACAGCGAGCG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTGGACCTGTTGTGGTaGAGATGGGGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLDLLW*RWGRRW
Trigger: CCACCTCCTCCCCCATCTGCACCACAACAGGTCCAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGGGTCCCCAGCAATTaGATTCTGCAAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPWVPSN*ILQGLQ
Trigger: CTGCAGGCCTTGCAGAATGCAATTGCTGGGGACCCA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGCTGTTCTGCTGAGCTaGAAGGGCTTGCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPAVLLS*KGLHFP
Trigger: AGGGAAGTGCAAGCCCTTCCAGCTCAGCAGAACAGC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTCAGCCTTTGGCATGTaGGTGATCCCCAGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAASAFGM*VIPSGC
Trigger: ACAGCCGCTGGGGATCACCCACATGCCAAAGGCTGA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTCAATGCCATTGCCTaGGGAGCCATCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLNAIA*GAISSR
Trigger: CCTGGAGGAGATGGCTCCCCAGGCAATGGCATTGAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCCAGCTTTGCAGCCCTaGCCTTTGTCTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAPALQP*PLSGGA
Trigger: TGCTCCACCAGACAAAGGCCAGGGCTGCAAAGCTGG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCAAATGTGGTGGAGGTaGGCAAGCCCAGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCQMWWR*ASPDLA
Trigger: GGCCAGATCTGGGCTTGCCCACCTCCACCACATTTG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCGAGCCCGAGTGTTCTaGAACCAGACTTGGACCACT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRARVF*NQTWTT
Trigger: AGTGGTCCAAGTCTGGTTCCAGAACACTCGGGCTCG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCCAGGAAGAATGACTaGAGGAAGGCCAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSRKND*RKAREP
Trigger: GGGCTCCCTGGCCTTCCTCCAGTCATTCTTCCTGGA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTTGGAGCTCTGCGGCTaGTCGCCCTCGCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVLELCG*SPSPLA
Trigger: AGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTTGCTGAGGTGACCTaGGTGGCAGCTGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPFAEVT*VAAAFS
Trigger: TGAGAATGCAGCTGCCACTCAGGTCACCTCAGCAAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTACCACCAAGAGACCTTaGAGACCCCAAAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPTTKRP*RPQNRV
Trigger: GACACGGTTTTGGGGTCTTCAAGGTCTCTTGGTGGT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTCTCACTGGTCATGTaGATCCGGAGGTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCFSLVM*IRRFLA
Trigger: GGCGAGGAACCTCCGGATTCACATGACCAGTGAGAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCCTTGCTGGTGCAGCTaGAGCTTTCGCAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVPCWCS*SFRSPS
Trigger: TGAGGGGCTGCGAAAGCTTCAGCTGCACCAGCAAGG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGAGGTTGTCCTCCTCTaGTGGCAGGCCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVEVVLL*WQALLV
Trigger: CACCAGCAAGGCCTGCCATCAGAGGAGGACAACCTC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCACTGGGCTGTCACCTaGATATTTCCCAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPHWAVT*IFPRTL
Trigger: GAGGGTTCTGGGAAATATTCAGGTGACAGCCCAGTG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGACACTCAATGCCATTaGCTGGGGAGCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCDTQCH*LGSHLL
Trigger: GAGGAGATGGCTCCCCAGGCAATGGCATTGAGTGTC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCGCTCGCTGTTCACATaGACACTTAGAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCRSLFT*TLRASR
Trigger: CCTGGAGGCTCTAAGTGTGCATGTGAACAGCGAGCG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGGGTCAGATGCAGCTaGAGGTGCATCTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPWVRCS*RCILLL
Trigger: CAGCAACAAGATGCACCTGCAGCTGCATCTGACCCA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGCTGTAGGTGGGTCCTaGTCTGATTTCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAAVGGS*SDFSGA
Trigger: TGCCCCTGAGAAATCAGAGCAGGACCCACCTACAGC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCCTCAAGCCCTGACATaGTTTTGTCATCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPPQALT*FCHPLG
Trigger: GCCCAGTGGATGACAAAAGCATGTCAGGGCTTGAGG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGCTCTCTACAGGACTTaGCTTCCCTTCATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPALYRT*LPFMVH
Trigger: GTGGACCATGAAGGGAAGGCAAGTCCTGTAGAGAGC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTACTTGGTTCCAGCTTTaGAGCCCTGGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPTWFQL*SPGLCL
Trigger: CAGACAAAGGCCAGGGCTGCAAAGCTGGAACCAAGT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGGAAGTGCAGGGTGCTaGACTGGCTGCATCATAATG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPGSAGC*TGCIIM
Trigger: CATTATGATGCAGCCAGTGCAGCACCCTGCACTTCC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTCCATCTGGGGCAGCTaGAGGGCCAGCTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISIWGS*RASCGG
Trigger: TCCCCCACAGCTGGCCCTGCAGCTGCCCCAGATGGA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGGGGTGAAGCCATGCTaGTGTGTTGTTGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPGVKPC*CVVELS
Trigger: GGACAGTTCAACAACACACCAGCATGGCTTCACCCC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCTGTTTGGGTTTGGATaGGGAGGGTGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALFGFG*GGCSTA
Trigger: GGCTGTGGAACACCCTCCCCATCCAAACCCAAACAG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGGTGGGTTTCTGTTTaGGTTTGGATGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRWVSV*VWMGRV
Trigger: CACCCTCCCCATCCAAACCCAAACAGAAACCCACCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGCCCTGGCCTTTGTCTaGTGGAGCACTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAALAFV*WSTDLM
Trigger: CATGAGATCAGTGCTCCACCAGACAAAGGCCAGGGC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCGGTGGAGGAGTGGGTaGTGGAGCTTGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQRWRSG*WSLQRS
Trigger: GCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGAGGCGGTGGAGGAGTaGGTGGTGGAGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQEAVEE*VVELAE
Trigger: CTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCAATTGGACCTGTTGTaGTGCAGATGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAQLDLL*CRWGRR
Trigger: CCTCCTCCCCCATCTGCACCACAACAGGTCCAATTG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGAGAGGGTGTCCATCTaGGGCAGCTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIERVSI*GSCRAS
Trigger: GCTGGCCCTGCAGCTGCCCCAGATGGACACCCTCTC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCTTGGGCGGCTGTGTTaGAGGCTGGGGTATGGACGC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLGRLC*RLGYGR
Trigger: GCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCGAGCCCGAGTGTTCTaGAACCAGACTTGGACCACT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCRARVF*NQTWTT
Trigger: AGTGGTCCAAGTCTGGTTCCAGAACACTCGGGCTCG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTAGGTGGTGGTGGAGGTaGTGGAGTCTGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAARWWWR*WSLQQR
Trigger: TCTTTGCTGCAGACTCCACCACCTCCACCACCACCT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCGCCTTTGGCTGTCTTaGCAGGAACTGGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRLWLS*QELVSA
Trigger: AGCAGAAACCAGTTCCTGCCAAGACAGCCAAAGGCG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTTGCTGAGGTGACCTaGGTGGCAGCTGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAFAEVT*VAAAFS
Trigger: TGAGAATGCAGCTGCCACTCAGGTCACCTCAGCAAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTTCCTTTGCTGAGGTaGCCTGAGTGGCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAFPLLR*PEWQLH
Trigger: ATGCAGCTGCCACTCAGGTCACCTCAGCAAAGGAAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCCTTTGGCATGTGGGTaGTCCCCAGCGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQPLACG*SPAAVL
Trigger: CAGAACAGCCGCTGGGGATCACCCACATGCCAAAGG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTATGCTGGTGTGTTGTTaGACTGTCCTCGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPMLVCC*TVLVSM
Trigger: CATGGAGACGAGGACAGTTCAACAACACACCAGCAT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGCCGCCTCGTGCCTGTaGTTGGTAGTATGCAGACGT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVAASCL*LVVCRR
Trigger: ACGTCTGCATACTACCAATCACAGGCACGAGGCGGC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCACTGGGCTGTCACCTaGATATTTCCCAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCHWAVT*IFPRTL
Trigger: GAGGGTTCTGGGAAATATTCAGGTGACAGCCCAGTG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGGAGTCCTCAAGCCCTaGCATGCTTTTGTCATCCAC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAGVLKP*HAFVIH
Trigger: GTGGATGACAAAAGCATGTCAGGGCTTGAGGACTCC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGACCTAGGTGGTGGGTaGTGGGTGGGTTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRDLGGG*WVGCAE
Trigger: CTCTGCACAACCCACCCATCACCCACCACCTAGGTC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTAGAAACTGGGGTTGCTaGAACTGGAGCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAARNWGC*NWSSAS
Trigger: AGAGGCACTGCTCCAGTTTCAGCAACCCCAGTTTCT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTGCTTGGTTGCTGTTaGGGTTGCTGCTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLLGCC*GCCCCG
Trigger: ACCACAACAGCAGCAACCTCAACAGCAACCAAGCAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCGTTTATCACGGTGTTaGTCTTCACCGCTATTCCCG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRLSRC*SSPLFP
Trigger: CGGGAATAGCGGTGAAGATCAACACCGTGATAAACG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGTCAGGCTCTATCCCTaGAACTTTCTCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAVRLYP*NFLWHL
Trigger: GAGGTGCCAGAGAAAGTTGCAGGGATAGAGCCTGAC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCTGGAGACACACTGTaGAAATGGGTCAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSGDTL*KWVRCS
Trigger: GCTGCATCTGACCCATTTGCACAGTGTGTCTCCAGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCCTCAAGCCCTGACATaGTTTTGTCATCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCPQALT*FCHPLG
Trigger: GCCCAGTGGATGACAAAAGCATGTCAGGGCTTGAGG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCACTTGGTTCCAGCTTTaGAGCCCTGGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCTWFQL*SPGLCL
Trigger: CAGACAAAGGCCAGGGCTGCAAAGCTGGAACCAAGT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTGAAACTGGAGCAGTaGCTCTGGGGTCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLKLEQ*LWGHWK
Trigger: TTTCCAATGACCCCAGAGGCACTGCTCCAGTTTCAG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGTTCACTTCAGCCTTTaGCATGTGGGTGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCVHFSL*HVGDPQ
Trigger: CTGGGGATCACCCACATGCCAAAGGCTGAAGTGAAC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTCCCCGGGCAAGCCTaGGATGAGGTTGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLPGQA*DEVVQS
Trigger: AGACTGGACAACCTCATCCCAGGCTTGCCCGGGGAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGGGGTTGGAGCAGAGTaGCCAAACACCTGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQGVGAE*PNTCSP
Trigger: TGGCGAGCAGGTGTTTGGCCACTCTGCTCCAACCCC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCCCCCTTCCTTGATGTaGGCCACCAGCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVPPSLM*ATSWYF
Trigger: GAAGTACCAGCTGGTGGCCCACATCAAGGAAGGGGG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGACAGGACATGCATCTaGATCCGACTTTGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPDRTCI*IRLWSL
Trigger: TAGGGACCAAAGTCGGATCCAGATGCATGTCCTGTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCCAAGGTCGAGCTTTaGCTGTATGCAACACTGCAG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSKVEL*LYATLQ
Trigger: CTGCAGTGTTGCATACAGCCAAAGCTCGACCTTGGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGACTCTAACATCCCTTaGCCAGGGCTATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPDSNIP*PGLFTA
Trigger: TGCTGTGAATAGCCCTGGCCAAGGGATGTTAGAGTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTGGAGCAGTGCCTCTaGGGTCATTGGAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLEQCL*GHWKMR
Trigger: CCTCATTTTCCAATGACCCCAGAGGCACTGCTCCAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCATGCCAGTCATACCTaGCACCCCAAATGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCHASHT*HPKCGG
Trigger: TCCACCACATTTGGGGTGCCAGGTATGACTGGCATG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGGGTTGGGAAGGCTATaGTACACTGATCACATGGGT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPGLGRL*YTDHMG
Trigger: ACCCATGTGATCAGTGTACCATAGCCTTCCCAACCC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGGTCGCCCTCGCCTTTaGCTGTCTTGGCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQGRPRL*LSWQEL
Trigger: CAGTTCCTGCCAAGACAGCCAAAGGCGAGGGCGACC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCAGGTGTGCTCGGGGTaGAGCCATGCTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNQVCSG*SHAGVL
Trigger: CAACACACCAGCATGGCTTCACCCCGAGCACACCTG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCTTGCTGGTGCAGCTaGAGCTTTCGCAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPCWCS*SFRSPS
Trigger: TGAGGGGCTGCGAAAGCTTCAGCTGCACCAGCAAGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCTCTCTCCATTTCCTaGTCTATGCCATGGTCATCC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSLSIS*SMPWSS
Trigger: GGATGACCATGGCATAGATCAGGAAATGGAGAGAGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTGCTTGGTTGCTGTTaGGGTTGCTGCTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALLGCC*GCCCCG
Trigger: ACCACAACAGCAGCAACCTCAACAGCAACCAAGCAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTATGGCATGTCCTTCATaGGTTGGCAGTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPMACPS*VGSLYL
Trigger: CAAGTACAGACTGCCAACTCATGAAGGACATGCCAT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTGAGTGAGATCTGCTaGGAGGGTGTCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLSEIC*EGVHLG
Trigger: CCCCAGATGGACACCCTCTCAGCAGATCTCACTCAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTGCCCTAGCATTCTaGAACCACACCTGCACCACT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCFALAF*NHTCTT
Trigger: AGTGGTGCAGGTGTGGTTTCAGAATGCTAGGGCAAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCTCGGTCTGCTGTCCTaGCAGAGAGGATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQILGLLS*QRGWRR
Trigger: CCTCCTCCATCCTCTCTGTCAGGACAGCAGACCGAG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTCTTGCAGGCTCTGCTaGTACTGTTGGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAASCRLC*YCWYCC
Trigger: ACAGCAGTACCAACAGTATCAGCAGAGCCTGCAAGA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGACACTGATATTTGCTaGCTGGGATGCGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAADTDIC*LGCEAL
Trigger: CAGTGCTTCGCATCCCAGTCAGCAAATATCAGTGTC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTCTGCCCATTTTCCTaGCTTGAGATAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLCPFS*LEIGGE
Trigger: CTCTCCTCCTATCTCAAGGCAGGAAAATGGGCAGAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGACCTGAGTGGCAGCTaGATTCTCAATGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCDLSGS*ILNAET
Trigger: GGTTTCAGCATTGAGAATGCAGCTGCCACTCAGGTC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCCTGGCTCCCAAAGATaGTGTTTCAAGCTCATTCGC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAPGSQR*CFKLIR
Trigger: GCGAATGAGCTTGAAACAGCATCTTTGGGAGCCAGG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTGCAAATGGGTCAGATaGAGCTGCAGGTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAACKWVR*SCRCIL
Trigger: CAAGATGCACCTGCAGCTGCATCTGACCCATTTGCA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTCCACAGGCTCCTTTaGTGGCTTCTGTTCCTCATT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLHRLL*WLLFLI
Trigger: AATGAGGAACAGAAGCCAGCAAAGGAGCCTGTGGAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCAGCTGTGGGGGAAGTaGAGGGTGCTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHQLWGK*RVLHWL
Trigger: CAGCCAGTGCAGCACCCTGCACTTCCCCCACAGCTG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACCCACTGCACGGAACTaGCCTTTCCTTTCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRPTARN*PFLSRA
Trigger: GGCTCGAGAAAGGAAAGGGCAGTTCCGTGCAGTGGG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGAAAGAGACTCTCCATaGCACAGATTGGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCERDSP*HRLVAG
Trigger: ACCTGCCACCAATCTGTGGCATGGAGAGTCTCTTTC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGATCTCCTCCAGGACCTaGTGTACCAGGTGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQISSRT*CTRCAR
Trigger: CCGAGCACACCTGGTACACCAGGTCCTGGAGGAGAT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGGGTTGGAGCAGAGTaGCCAAACACCTGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGVGAE*PNTCSP
Trigger: TGGCGAGCAGGTGTTTGGCCACTCTGCTCCAACCCC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCTGTTTGGGTTTGGATaGGGAGGGTGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVLFGFG*GGCSTA
Trigger: GGCTGTGGAACACCCTCCCCATCCAAACCCAAACAG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCAGCTCTCCAAGTCCTaGTGCCAGAGCCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHQLSKS*CQSRCC
Trigger: ACAGCAGCGGCTCTGGCACCAGGACTTGGAGAGCTG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGTACGGAAACTCCGCTaGCAGAGGGTACACATTGTA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAVRKLR*QRVHIV
Trigger: TACAATGTGTACCCTCTGCCAGCGGAGTTTCCGTAC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTGCTATTGGCTTCCTaGGGGACAGGACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLLLAS*GTGLEA
Trigger: AGCCTCCAGTCCTGTCCCCCAGGAAGCCAATAGCAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGTGGTGGGTGATGGGTaGGTTGTGCAGAGATTAATT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPVVGDG*VVQRLI
Trigger: AATTAATCTCTGCACAACCCACCCATCACCCACCAC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGGGCAAGCCCAGATCTaGCCCCAAGCTAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQGQAQI*PQAKLC
Trigger: GCAGAGTTTAGCTTGGGGCCAGATCTGGGCTTGCCC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTATGTCCTTCATGAGTTaGCAGTCTGTACTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPMSFMS*QSVLAR
Trigger: CCTGGCAAGTACAGACTGCCAACTCATGAAGGACAT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGTAGGGCATGTCCATaGGTCTTTCCAAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPCRACP*VFPRME
Trigger: CTCCATTCTTGGAAAGACCCATGGACATGCCCTACA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCTCCCCCATCCTCTGTaGATATTAAAGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALPHPL*ILKGLV
Trigger: CACCAAGCCCTTTAATATCCACAGAGGATGGGGGAG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCACAGACCTCTGTGGTaGGTGTGGTTGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAHRPLW*VWLLVF
Trigger: AAAAACCAGCAACCACACCCACCACAGAGGTCTGTG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGTCGCCCTCGCCTTTaGCTGTCTTGGCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGRPRL*LSWQEL
Trigger: CAGTTCCTGCCAAGACAGCCAAAGGCGAGGGCGACC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTTCCGAAGCCTCGTTaGAGCTCTGCGGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIFPKPR*SSAAGR
Trigger: GCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTCCTGGCGGATGCTTaGAAAAGGATATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPFLADA*KRILGQ
Trigger: CTGGCCTAATATCCTTTTCCAAGCATCCGCCAGGAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGGGTATTTCCTTTGCTaGGGTGACCTGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRGYFLC*GDLSGS
Trigger: GCTGCCACTCAGGTCACCTCAGCAAAGGAAATACCC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCAGGTGTGCTCGGGGTaGAGCCATGCTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHQVCSG*SHAGVL
Trigger: CAACACACCAGCATGGCTTCACCCCGAGCACACCTG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAGCCCCTCAGTCTGCTaGTGCTTCACCGACCGAACA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSPSVC*CFTDRT
Trigger: TGTTCGGTCGGTGAAGCATCAGCAGACTGAGGGGCT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAGCCCCTCAGTCTGCTaGTGCTTCACCGACCGAACA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISPSVC*CFTDRT
Trigger: TGTTCGGTCGGTGAAGCATCAGCAGACTGAGGGGCT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAGGTGGGTCCTGCTCTaGTTTCTCAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHRWVLL*FLRGSC
Trigger: GCAGCTGCCCCTGAGAAATCAGAGCAGGACCCACCT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGGTTTTATTCCATTCTaGTGCCTCCACAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAGFIPF*CLHRLL
Trigger: AAGGAGCCTGTGGAGGCATCAGAATGGAATAAAACC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGACCTAGGTGGTGGGTaGTGGGTGGGTTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHDLGGG*WVGCAE
Trigger: CTCTGCACAACCCACCCATCACCCACCACCTAGGTC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTGCTCATCTGGGTTCTaGAGCGCTTGTGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQICSSGF*SACDQA
Trigger: GGCCTGGTCACAAGCGCTTCAGAACCCAGATGAGCA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAGGAGACGAAGTAGCTaGACTAGGAAACCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCRRRSS*TRKPKH
Trigger: ATGCTTGGGTTTCCTAGTTCAGCTACTTCGTCTCCT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTCCAGGGAGCTGAGGTaGAAAGTAGGATGCAAACCC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVSRELR*KVGCKP
Trigger: GGGTTTGCATCCTACTTTTCACCTCAGCTCCCTGGA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCACATAGCTTTGATGTaGTCTGCCCATTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAHIALM*SAHFPA
Trigger: GGCAGGAAAATGGGCAGAGCACATCAAAGCTATGTG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAAGTGGCACATTCGTTaGAGGGTATTTCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPKWHIR*RVFPLL
Trigger: CAGCAAAGGAAATACCCTGCAACGAATGTGCCACTT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAAAGAGTTTGCTGTTTaGCCCAGTCTGTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPKEFAV*PSLCIL
Trigger: CAGAATGCACAGACTGGGGCAAACAGCAAACTCTTT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTTTCCCAGAACCCTCTaGTGTCAAGGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVFPRTL*CQGCRW
Trigger: CCACCTACAGCCTTGACAGCAGAGGGTTCTGGGAAA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCCATTTCCTGATCTATaGCATGGTCATCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCPFPDL*HGHPGS
Trigger: TGACCCAGGATGACCATGGCATAGATCAGGAAATGG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGCTTATTATCTGTGCTaGTATTGGCTTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCAYYLC*YWLPGG
Trigger: TCCCCCAGGAAGCCAATAGCAGCACAGATAATAAGC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCATGCAACACTGCAGGTaGTGCACTTGTAGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCMQHCR*CTCRAY
Trigger: ATAAGCCCTACAAGTGCAGCACCTGCAGTGTTGCAT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGGCTGTATGCAACACTaGAGGTGCTGCACTTGTAGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVGCMQH*RCCTCR
Trigger: CCTACAAGTGCAGCACCTGCAGTGTTGCATACAGCC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTGCCAGGCTACCTTaGTCTTGTTTCAACAGTTTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLARLP*SCFNSL
Trigger: CAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGTGGGTGGTGGAGCTTaGAGAGGAGCAGATACTGTG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQVGGGA*RGADTV
Trigger: CACAGTATCTGCTCCTCTGCAAGCTCCACCACCCAC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGGAAGTGCAGGGTGCTaGACTGGCTGCATCATAATG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVGSAGC*TGCIIM
Trigger: CATTATGATGCAGCCAGTGCAGCACCCTGCACTTCC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGGGGAAGTGCAGGGTaGTGCACTGGCTGCATCATA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGGSAG*CTGCII
Trigger: TATGATGCAGCCAGTGCAGCACCCTGCACTTCCCCC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGAAGTCATGGAAATTTaGAGTGGGCTGGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPEVMEI*SGLEGI
Trigger: AATCCCTTCCAGCCCACTGCAAATTTCCATGACTTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCCACTGCACGGAACTaGCCTTTCCTTTCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPTARN*PFLSRA
Trigger: GGCTCGAGAAAGGAAAGGGCAGTTCCGTGCAGTGGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGAGCCCAGGGTAGGCTaGTTGCAAGCTGATACCATG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQEPRVG*LQADTM
Trigger: CATGGTATCAGCTTGCAAGCAGCCTACCCTGGGCTC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGGCTGAGCCATCACTaGTTAGATAGTCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPWLSHH*LDSLSL
Trigger: GAGAGAAAGACTATCTAACCAGTGATGGCTCAGCCA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTCAGCCTTTGGCATGTaGGTGATCCCCAGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSAFGM*VIPSGC
Trigger: ACAGCCGCTGGGGATCACCCACATGCCAAAGGCTGA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGGGGTGAAGCCATGCTaGTGTGTTGTTGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVGVKPC*CVVELS
Trigger: GGACAGTTCAACAACACACCAGCATGGCTTCACCCC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACATCTCCTCCAGGACCTaGTGTACCAGGTGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHISSRT*CTRCAR
Trigger: CCGAGCACACCTGGTACACCAGGTCCTGGAGGAGAT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGCTAGTGTTAGGGGTTaGAGCAGAGTGGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVASVRG*SRVAKH
Trigger: GTGTTTGGCCACTCTGCTCCAACCCCTAACACTAGC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCCCCCTTCCTTGATGTaGGCCACCAGCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHPPSLM*ATSWYF
Trigger: GAAGTACCAGCTGGTGGCCCACATCAAGGAAGGGGG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCATCCTCAGCCACTGTaGGAGGCTTCAGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIHPQPL*EASEGL
Trigger: GAGACCCTCTGAAGCCTCCCACAGTGGCTGAGGATG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGACACACTGTGCAAATaGGTCAGATGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVDTLCK*VRCSCR
Trigger: CCTGCAGCTGCATCTGACCCATTTGCACAGTGTGTC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCACTCAGTTCAGGATaGCCTGCTTCCAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSLSSG*PASKCF
Trigger: GAAACACTTGGAAGCAGGCCATCCTGAACTGAGTGA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTTGCCTTCCCTTCATaGTCCACCTCATATTCTCTC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLAFPS*STSYSL
Trigger: GAGAGAATATGAGGTGGACCATGAAGGGAAGGCAAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCTGCTATTGGCTTCCTaGGGGACAGGACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQILLLAS*GTGLEA
Trigger: AGCCTCCAGTCCTGTCCCCCAGGAAGCCAATAGCAG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCCAGCTTTGCAGCCCTaGCCTTTGTCTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIPALQP*PLSGGA
Trigger: TGCTCCACCAGACAAAGGCCAGGGCTGCAAAGCTGG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCTGAAGCTAAGCTCATaGACTCTAACATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALKLSS*TLTSLG
Trigger: GCCAAGGGATGTTAGAGTCCATGAGCTTAGCTTCAG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGGCAAGCCCAGATCTaGCCCCAAGCTAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGQAQI*PQAKLC
Trigger: GCAGAGTTTAGCTTGGGGCCAGATCTGGGCTTGCCC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCAAATGTGGTGGAGGTaGGCAAGCCCAGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIQMWWR*ASPDLA
Trigger: GGCCAGATCTGGGCTTGCCCACCTCCACCACATTTG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGCAGATACTGTGTTTaGGATTTTCACAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSRYCV*DFHRPQ
Trigger: TTGGGGCCTGTGAAAATCCCAAACACAGTATCTGCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCAATTGGACCTGTTGTaGTGCAGATGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQQLDLL*CRWGRR
Trigger: CCTCCTCCCCCATCTGCACCACAACAGGTCCAATTG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGAGAGGGTGTCCATCTaGGGCAGCTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSERVSI*GSCRAS
Trigger: GCTGGCCCTGCAGCTGCCCCAGATGGACACCCTCTC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGATCAGTGGCATCCATaGAGTCTTCCGTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAADQWHP*SLPFGF
Trigger: AAAGCCAAACGGAAGACTCCATGGATGCCACTGATC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGGGTTGCAGTGCTTTTaGCTGTATCTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAGLQCF*LYLFVQ
Trigger: CTGGACAAACAGATACAGCCAAAAGCACTGCAACCC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGTAGGGCATGTCCATaGGTCTTTCCAAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCCRACP*VFPRME
Trigger: CTCCATTCTTGGAAAGACCCATGGACATGCCCTACA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTCTGGAACCAGACTTaGACCACTCTTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPFWNQT*TTLFFS
Trigger: GCTGAAGAAAAGAGTGGTCCAAGTCTGGTTCCAGAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCATCACAGACCTCTGTaGTGGGTGTGGTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVHHRPL*WVWLLV
Trigger: AACCAGCAACCACACCCACCACAGAGGTCTGTGATG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCCTATAAAGGATGCTaGGTCCCCAGCAATTGCATT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSYKGC*VPSNCI
Trigger: AATGCAATTGCTGGGGACCCAGCATCCTTTATAGGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTGATATTTGCTGACTaGGATGCGAAGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLIFAD*DAKHCF
Trigger: GAAACAGTGCTTCGCATCCCAGTCAGCAAATATCAG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTAAGTCTTGTAGCTTCTaGCTCAGCTCACTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAKSCSF*LSSLSD
Trigger: GTCTGACAGTGAGCTGAGCCAGAAGCTACAAGACTT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGGGCCGTAGAAGACTaGTCACTCTTCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGAVED*SLFSPA
Trigger: TGCTGGAGAGAAGAGTGATCAGTCTTCTACGGCCCC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTGGTCTTTGCTCTCTaGCATCTTGCTAGACTCAGA +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLVFAL*HLARLR
Trigger: TCTGAGTCTAGCAAGATGTCAGAGAGCAAAGACCAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCAGTGGGTTCACTTTTaGCAGGGCACCCCACATTCG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHQWVHF*QGTPHS
Trigger: CGAATGTGGGGTGCCCTGTCAAAAGTGAACCCACTG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCGGGCAAGCCTGGGATaGGGTTGTCCAGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNRASLG*GCPVLQ
Trigger: TTGTAAGACTGGACAACCTCATCCCAGGCTTGCCCG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCGGGCAAGCCTGGGATaGGGTTGTCCAGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIRASLG*GCPVLQ
Trigger: TTGTAAGACTGGACAACCTCATCCCAGGCTTGCCCG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGTCACTGATATAAGGTaGCAGCTCTCCAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVVTDIR*QLSKSW
Trigger: CCAGGACTTGGAGAGCTGTCACCTTATATCAGTGAC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTCAGCGCCGGGTCACTaGTATAAGGTGACAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSAPGH*YKVTAL
Trigger: GAGAGCTGTCACCTTATATCAGTGACCCGGCGCTGA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTATCCTCTGTAGGTTTTaGCCTTTTGGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPILCRF*PFGSCV
Trigger: AACACAGGAACCAAAAGGTCAAAACCTACAGAGGAT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTGTCTGGTGGAGCACTaGTCTCATGTGGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVCLVEH*SHVDLQ
Trigger: TTGGAGATCCACATGAGATCAGTGCTCCACCAGACA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGGATGATCTTTTGCTaGATGCGGCATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPWMIFC*MRHLIC
Trigger: ACAAATCAGATGCCGCATTCAGCAAAAGATCATCCA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGCTTTTTCTGATGTGTaGTCAAGTCAAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPAFSDV*SSQRSW
Trigger: CCAGGATCTTTGACTTGATCACACATCAGAAAAAGC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGGAGGTAGACTGTTCTaGAGAGAAGTCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPGGRLF*REVMEI
Trigger: AATTTCCATGACTTCTCTTCAGAACAGTCTACCTCC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTACTTCCCGTGCAATGTaGTCAAGCATTTTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAATSRAM*SSIFRV
Trigger: TACCCGAAAAATGCTTGATCACATTGCACGGGAAGT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTCCAGGGAGCTGAGGTaGAAAGTAGGATGCAAACCC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQSRELR*KVGCKP
Trigger: GGGTTTGCATCCTACTTTTCACCTCAGCTCCCTGGA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCCATTCGGACACTATTaGAATTACCATCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAPFGHY*NYHLGQ
Trigger: CTGGCCTAGATGGTAATTTCAATAGTGTCCGAATGG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCCATTCGGACACTATTaGAATTACCATCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCPFGHY*NYHLGQ
Trigger: CTGGCCTAGATGGTAATTTCAATAGTGTCCGAATGG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCACTGATACTTCCGTCTaGAAAGTCCTTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCTDTSV*KVLATN
Trigger: ATTGGTGGCAAGGACTTTGCAGACGGAAGTATCAGT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGACACTCAATGCCATTaGCTGGGGAGCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNDTQCH*LGSHLL
Trigger: GAGGAGATGGCTCCCCAGGCAATGGCATTGAGTGTC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAGAAGCATCATGTTGTaGATGTGCTTCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCRSIML*MCFSLV
Trigger: GACCAGTGAGAAGCACATGCACAACATGATGCTTCT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTAGGTGAACAGGGTTaGCAATGGCAATGCACTTCA +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLGEQG*QWQCTS
Trigger: TGAAGTGCATTGCCATTGGCAACCCTGTTCACCTAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGCTGTAGGTGGGTCCTaGTCTGATTTCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHAVGGS*SDFSGA
Trigger: TGCCCCTGAGAAATCAGAGCAGGACCCACCTACAGC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTTCCCAGAACCCTCTaGTGTCAAGGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQFPRTL*CQGCRW
Trigger: CCACCTACAGCCTTGACAGCAGAGGGTTCTGGGAAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGCTCTCTACAGGACTTaGCTTCCCTTCATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQALYRT*LPFMVH
Trigger: GTGGACCATGAAGGGAAGGCAAGTCCTGTAGAGAGC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGGCTGTATGCAACACTaGAGGTGCTGCACTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQGCMQH*RCCTCR
Trigger: CCTACAAGTGCAGCACCTGCAGTGTTGCATACAGCC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTCAGTCACCTCTTCTaGCTCCTTGTAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAFSHLF*LLVRWH
Trigger: ATGCCATCTTACAAGGAGGCAGAAGAGGTGACTGAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGTGGGTGGTGGAGCTTaGAGAGGAGCAGATACTGTG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIVGGGA*RGADTV
Trigger: CACAGTATCTGCTCCTCTGCAAGCTCCACCACCCAC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTTGGACCTGTTGTGGTaGAGATGGGGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLDLLW*RWGRRW
Trigger: CCACCTCCTCCCCCATCTGCACCACAACAGGTCCAA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGGGGGAAGTGCAGGGTaGTGCACTGGCTGCATCATA +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHGGSAG*CTGCII
Trigger: TATGATGCAGCCAGTGCAGCACCCTGCACTTCCCCC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAGGGAGCTGACTTGGTaGCTTGAGGAAGAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHRELTW*LEEERG
Trigger: ACCCCTCTCTTCCTCAAGGCACCAAGTCAGCTCCCT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCCAATCAGTTGGGGTTaGTTGGGCGGCTGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHPISWG*LGGCVG
Trigger: TCCAACACAGCCGCCCAAGCAACCCCAACTGATTGG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGAAGTCATGGAAATTTaGAGTGGGCTGGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAEVMEI*SGLEGI
Trigger: AATCCCTTCCAGCCCACTGCAAATTTCCATGACTTC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTGGGTCCCCAGCAATTaGATTCTGCAAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHWVPSN*ILQGLQ
Trigger: CTGCAGGCCTTGCAGAATGCAATTGCTGGGGACCCA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAGCTTTCCTGGCGGATaGTTGGAAAAGGATATTAGG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSFPGG*LEKDIR
Trigger: CCTAATATCCTTTTCCAAGCATCCGCCAGGAAAGCT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCCCTGCAACTTTCTCTaGCACCTCATTATCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAPCNFL*HLIIKL
Trigger: CAACTTGATAATGAGGTGCCAGAGAAAGTTGCAGGG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGCTGTTCTGCTGAGCTaGAAGGGCTTGCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIAVLLS*KGLHFP
Trigger: AGGGAAGTGCAAGCCCTTCCAGCTCAGCAGAACAGC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGCTAGTGTTAGGGGTTaGAGCAGAGTGGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRASVRG*SRVAKH
Trigger: GTGTTTGGCCACTCTGCTCCAACCCCTAACACTAGC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGAACAGGGTTGCCAATaGCAATGCACTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVREQGCQ*QCTSAS
Trigger: GGAGGCTGAAGTGCATTGCCATTGGCAACCCTGTTC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGACAGGACATGCATCTaGATCCGACTTTGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVDRTCI*IRLWSL
Trigger: TAGGGACCAAAGTCGGATCCAGATGCATGTCCTGTC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTTGCTGAGAACATCCTaGCAGAGTGGACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVLLRTS*QSGQQM
Trigger: CATCTGCTGTCCACTCTGCCAGGATGTTCTCAGCAA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCTGGGGGACAGGACTaGAGGCTTCTTGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPGGQD*RLLAKP
Trigger: AGGTTTTGCAAGAAGCCTCCAGTCCTGTCCCCCAGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTGGAGCAGTGCCTCTaGGGTCATTGGAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLEQCL*GHWKMR
Trigger: CCTCATTTTCCAATGACCCCAGAGGCACTGCTCCAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACATGCCAGTCATACCTaGCACCCCAAATGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRHASHT*HPKCGG
Trigger: TCCACCACATTTGGGGTGCCAGGTATGACTGGCATG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTTCAACAGTTTGCTTaGTTGCTGTTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPFQQFA*LLLRLL
Trigger: CAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAGGCGGTGGTGTTTCTaGGGAAGAAGGAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVRRWCF*GRRRNW
Trigger: CCAATTTCTCCTTCTTCCCCAGAAACACCACCGCCT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTGGAGGTGGAGGCGGTaGTGTTTCTGGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHWRWRR*CFWGRR
Trigger: CCTTCTTCCCCAGAAACACCACCGCCTCCACCTCCA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTATGGAGTCTTCCGTTTaGCTTTCATCTTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAMESSV*LSSWAS
Trigger: TGATGCCCAAGATGAAAGCCAAACGGAAGACTCCAT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAAATTTGCAGTGGGCTaGAAGGGATTGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCKFAVG*KGLEFV
Trigger: CACAAACTCCAATCCCTTCCAGCCCACTGCAAATTT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTCCCCTCATTCCAGTaGCGAGAGCGAATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQFPSFQ*RERMWL
Trigger: AAGCCACATTCGCTCTCGCCACTGGAATGAGGGGAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTACATTCTTGCATGGTTaGAGTCCGATAGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPTFLHG*SPIVTE
Trigger: TTCAGTGACTATCGGACTCCAACCATGCAAGAATGT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAAATATGATCTCGGATaGACAAGCGGGCAGAGTACT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCKYDLG*TSGQST
Trigger: AGTACTCTGCCCGCTTGTCCATCCGAGATCATATTT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTCCAGGAAGAATGACTaGAGGAAGGCCAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHSRKND*RKAREP
Trigger: GGGCTCCCTGGCCTTCCTCCAGTCATTCTTCCTGGA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTGGTGGTGGAGGTGGTaGAGTCTGCAGCAAAGATTT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVWWWRW*SLQQRF
Trigger: AAATCTTTGCTGCAGACTCCACCACCTCCACCACCA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAGGTGGTGGTGGAGGTaGTGGAGTCTGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHRWWWR*WSLQQR
Trigger: TCTTTGCTGCAGACTCCACCACCTCCACCACCACCT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTCCTATAAAGGATGCTaGGTCCCCAGCAATTGCATT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAASYKGC*VPSNCI
Trigger: AATGCAATTGCTGGGGACCCAGCATCCTTTATAGGA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 72 bp ACAAACTGCAATACACAGGGCAGACACGTGACTCCATaGCTCAAGAGTCCCTCTGTGGTAAAACTGTACTAC +
Preference number: 4 (lower is better)
Translates to: TNCNTQGRHVTP*LKSPSVVKLYY
Trigger: GTAGTACAGTTTTACCACAGAGGGACTCTTGAGCAATGGAGTCACGTGTCTGCCCTGTGTATTGCAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGGGTATTTCCTTTGCTaGGGTGACCTGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHGYFLC*GDLSGS
Trigger: GCTGCCACTCAGGTCACCTCAGCAAAGGAAATACCC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTGGTTTCCCGAGGGATaGAGCAATATGAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAWFPEG*SNMKSV
Trigger: AACACTTTTCATATTGCTTCATCCCTCGGGAAACCA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTCAGCGCCGGGTCACTaGTATAAGGTGACAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHSAPGH*YKVTAL
Trigger: GAGAGCTGTCACCTTATATCAGTGACCCGGCGCTGA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCCAGGCTGTCAGAGGTaGATTTGTTGCAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQPGCQR*ICCKQH
Trigger: GTGCTGTTTGCAACAAATTCACCTCTGACAGCCTGG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGCGTTACACTTTAGGTaGACAGGGTTGCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRALHFR*TGLPMA
Trigger: TGCCATTGGCAACCCTGTTCACCTAAAGTGTAACGC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTGTACAGAGTGCTGTaGCAGGACATGCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLYRVL*QDMHLD
Trigger: ATCCAGATGCATGTCCTGTCACAGCACTCTGTACAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCTGTACAGAGTGCTGTaGCAGGACATGCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLYRVL*QDMHLD
Trigger: ATCCAGATGCATGTCCTGTCACAGCACTCTGTACAG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAGAGTGGACAGCAGATaGCTGGCTGTACAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIRVDSR*LAVQSA
Trigger: AGCACTCTGTACAGCCAGTCATCTGCTGTCCACTCT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAGGTGGGTCCTGCTCTaGTTTCTCAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSRWVLL*FLRGSC
Trigger: GCAGCTGCCCCTGAGAAATCAGAGCAGGACCCACCT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGTTGTTCATTCAGTTaGTCTTGTAGAGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPCCSFS*SCRASE
Trigger: CTCAGATGCTCTACAAGATCAACTGAATGAACAACA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGTTGACAAAGCTGAGTaGGATCTGCTGAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRVDKAE*DLLRGC
Trigger: ACACCCTCTCAGCAGATCTCACTCAGCTTTGTCAAC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTCAGAATTTTTAGCTaGTCATCTGTAATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLRIFS*SSVIRV
Trigger: GACCCGGATTACAGATGATCAGCTAAAAATTCTGAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGTTTGATGACTTTTTaGGAGAGGCCAGATTTCTCA +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPCLMTF*ERPDFS
Trigger: TGAGAAATCTGGCCTCTCTCAAAAAGTCATCAAACA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTGGAGGAATTGGTTTTaGGCAGCGAGGAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQWRNWF*AARKCM
Trigger: CATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGGCCGTATTAATAGATaGGGTCTCATCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAGRINR*GLIKVS
Trigger: ACTGACTTTGATGAGACCTCATCTATTAATACGGCC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTTGCCCTAGCATTCTaGAACCACACCTGCACCACT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQFALAF*NHTCTT
Trigger: AGTGGTGCAGGTGTGGTTTCAGAATGCTAGGGCAAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTCATTCCAGGAAGAATaGCTGGAGGAAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISFQEE*LEEGQG
Trigger: TCCCTGGCCTTCCTCCAGTCATTCTTCCTGGAATGA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTCATTCCAGGAAGAATaGCTGGAGGAAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSFQEE*LEEGQG
Trigger: TCCCTGGCCTTCCTCCAGTCATTCTTCCTGGAATGA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTCGGTCTGCTGTCCTaGCAGAGAGGATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSLGLLS*QRGWRR
Trigger: CCTCCTCCATCCTCTCTGTCAGGACAGCAGACCGAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGACACTGATATTTGCTaGCTGGGATGCGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQDTDIC*LGCEAL
Trigger: CAGTGCTTCGCATCCCAGTCAGCAAATATCAGTGTC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCTTGACTGGAGGTGTTaGCTAAGTGCTTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVLDWRC*LSASFP
Trigger: TGGGAATGAAGCACTTAGTCAACACCTCCAGTCAAG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGAGTTCATTGGAATATaGATCCTCTTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPEFIGI*ILFILI
Trigger: GATGAGGATGAAGAGGATGCATATTCCAATGAACTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCACACCTGCTCGCCATTaGCATTTTGAAGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCTPARH*HFEDSE
Trigger: TTCAGAATCTTCAAAATGGCAATGGCGAGCAGGTGT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTATCTGTTTCATGTTCTaGTGCAGAAGCATCATGTTG +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPICFMF*CRSIML
Trigger: CAACATGATGCTTCTGCAGCAGAACATGAAACAGAT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCTTCAGAGGGTCTCCTaGATCTTCACTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLQRVS*IFTGFF
Trigger: GAAGAACCCAGTGAAGATGCAGGAGACCCTCTGAAG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGCTGTGACAGGACATaGATCTGGATCCGACTTTGG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRCCDRT*IWIRLW
Trigger: CCAAAGTCGGATCCAGATGCATGTCCTGTCACAGCA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTGGGTCAGATGCAGCTaGAGGTGCATCTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIWVRCS*RCILLL
Trigger: CAGCAACAAGATGCACCTGCAGCTGCATCTGACCCA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGCAAATGGGTCAGATaGAGCTGCAGGTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRCKWVR*SCRCIL
Trigger: CAAGATGCACCTGCAGCTGCATCTGACCCATTTGCA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATCTGGAGACACACTGTaGAAATGGGTCAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRSGDTL*KWVRCS
Trigger: GCTGCATCTGACCCATTTGCACAGTGTGTCTCCAGA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTGTTTCAACAGTTTaGTTGGTTGCTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLVSTV*LVAVEV
Trigger: AACCTCAACAGCAACCAAGCAAACTGTTGAAACAAG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCCATATGGGAAAAATTaGCCATGCACATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAPYGKN*PCTCSW
Trigger: CCAAGAACATGTGCATGGGCAATTTTTCCCATATGG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCCATATGGGAAAAATTaGCCATGCACATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCPYGKN*PCTCSW
Trigger: CCAAGAACATGTGCATGGGCAATTTTTCCCATATGG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCCACATTGCACTTTTTaGATTGGTATTGCATGTTGC +
Preference number: 4 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPPHCTF*IGIACC
Trigger: GCAACATGCAATACCAATGCAAAAAGTGCAATGTGG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTGGCAAGCTATAACCTaGCTGCTTCCCCTCATTCCA +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQWQAIT*LLPLIP
Trigger: TGGAATGAGGGGAAGCAGGCAGGTTATAGCTTGCCA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGCAGACCAATCTCATTaGCCAGCATTTCACATTCTT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCADQSH*PAFHIL
Trigger: AAGAATGTGAAATGCTGGGCAATGAGATTGGTCTGC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCCTCCTATAAAGGATaGTGGGTCCCCAGCAATTGC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPSYKG*WVPSNC
Trigger: GCAATTGCTGGGGACCCAGCATCCTTTATAGGAGGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCCCTCCTATAAAGGATaGTGGGTCCCCAGCAATTGC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIPSYKG*WVPSNC
Trigger: GCAATTGCTGGGGACCCAGCATCCTTTATAGGAGGG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGCAGGAACTGGTTTCTaGTGCTGTTCTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRAGTGF*CCSCCC
Trigger: GCAACAGCAAGAACAGCAGCAGAAACCAGTTCCTGC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGAGGTGTTGACTAAGTaGTTCATTCCCACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVEVLTK*FIPTES
Trigger: GCTCTCAGTGGGAATGAAGCACTTAGTCAACACCTC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTGTCCTCTAACTCGCTaGTCTCACTCTCGTCATCCT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQCPLTR*SHSRHP
Trigger: AGGATGACGAGAGTGAGACCAGCGAGTTAGAGGACA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCACAGTTGTTCTCTTaGTCTTTGCTCTCTGACATC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSQLFS*SLLSDI
Trigger: GATGTCAGAGAGCAAAGACCAAGAGAACAACTGTGA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTGCTGAGAACATCCTaGCAGAGTGGACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLLRTS*QSGQQM
Trigger: CATCTGCTGTCCACTCTGCCAGGATGTTCTCAGCAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGACACACTGTGCAAATaGGTCAGATGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHDTLCK*VRCSCR
Trigger: CCTGCAGCTGCATCTGACCCATTTGCACAGTGTGTC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTTTCCACACCCACCTTaGAGTCCTCAAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNFPHPP*SPQALT
Trigger: TGTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTTCCACACCCACCTTaGAGTCCTCAAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIFPHPP*SPQALT
Trigger: TGTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGTTTCTTTAAAGCCTaGAATGTACGGAAACTCCGC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCCFFKA*NVRKLR
Trigger: GCGGAGTTTCCGTACATTCCAGGCTTTAAAGAAACA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCCTGGGGGACAGGACTaGAGGCTTCTTGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHPGGQD*RLLAKP
Trigger: AGGTTTTGCAAGAAGCCTCCAGTCCTGTCCCCCAGG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTGGCCTTTGTCTGGTaGAGCACTGATCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLAFVW*STDLMW
Trigger: CCACATGAGATCAGTGCTCCACCAGACAAAGGCCAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGCCCTGGCCTTTGTCTaGTGGAGCACTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHALAFV*WSTDLM
Trigger: CATGAGATCAGTGCTCCACCAGACAAAGGCCAGGGC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTCTCCAGTAATGCTTTaGCTGCATTTCCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISPVML*LHFPWP
Trigger: GGGCCAGGGGAAATGCAGCCAAAGCATTACTGGAGA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTTCCCCTCATTCCAGTaGCGAGAGCGAATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHFPSFQ*RERMWL
Trigger: AAGCCACATTCGCTCTCGCCACTGGAATGAGGGGAA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCCTGCACCACTCGTTTaGGCAGACCAATCTCATTGC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIPAPLV*ADQSHC
Trigger: GCAATGAGATTGGTCTGCCCAAACGAGTGGTGCAGG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGACGAAGCAGCTTTCCTaGCGGATGCTTGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQTKQLS*RMLGKG
Trigger: TCCTTTTCCAAGCATCCGCCAGGAAAGCTGCTTCGT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATTTCAGGTTGTCATGTaGGGAGCTGTTTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRFQVVM*GAVFPV
Trigger: GACAGGGAAAACAGCTCCTCACATGACAACCTGAAA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTGCATTCTCAATGCTaGAACCCAGCAAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLHSQC*NPARLH
Trigger: GTGAAGTCTTGCTGGGTTTCAGCATTGAGAATGCAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTTTCCTTTGCTGAGGTaGCCTGAGTGGCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHFPLLR*PEWQLH
Trigger: ATGCAGCTGCCACTCAGGTCACCTCAGCAAAGGAAA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAGCATGGGTTACAAATaGCCTGATATAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSMGYK*PDIAKR
Trigger: TCTTTTGGCTATATCAGGTCATTTGTAACCCATGCT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTCACCGTTTTCAACATaGAAAGCGCTCCATAAACCG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVSPFST*KALHKP
Trigger: CGGTTTATGGAGCGCTTTTCATGTTGAAAACGGTGA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACATGCTGGTGTGTTGTTaGACTGTCCTCGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHMLVCC*TVLVSM
Trigger: CATGGAGACGAGGACAGTTCAACAACACACCAGCAT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGTCACTGATATAAGGTaGCAGCTCTCCAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNVTDIR*QLSKSW
Trigger: CCAGGACTTGGAGAGCTGTCACCTTATATCAGTGAC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCCAGGCTGTCAGAGGTaGATTTGTTGCAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHPGCQR*ICCKQH
Trigger: GTGCTGTTTGCAACAAATTCACCTCTGACAGCCTGG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGCGTTACACTTTAGGTaGACAGGGTTGCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHALHFR*TGLPMA
Trigger: TGCCATTGGCAACCCTGTTCACCTAAAGTGTAACGC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGCCGCCTCGTGCCTGTaGTTGGTAGTATGCAGACGT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSAASCL*LVVCRR
Trigger: ACGTCTGCATACTACCAATCACAGGCACGAGGCGGC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAGAGTGGACAGCAGATaGCTGGCTGTACAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHRVDSR*LAVQSA
Trigger: AGCACTCTGTACAGCCAGTCATCTGCTGTCCACTCT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTGCTGCAACTCGTGCTaGAGTTGCATCTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQCCNSC*SCIWIC
Trigger: ACAAATCCAGATGCAACTTCAGCACGAGTTGCAGCA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGGTCCGTGGCCGTTTaGATTGAGAATGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGSVAV*IENVSR
Trigger: TCTTGAGACATTCTCAATTCAAACGGCCACGGACCC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGGTCCGTGGCCGTTTaGATTGAGAATGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGSVAV*IENVSR
Trigger: TCTTGAGACATTCTCAATTCAAACGGCCACGGACCC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACCCAAATGGATTTGGTaGACTGGGATCAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRPKWIW*TGISYA
Trigger: AGCATAGCTGATCCCAGTTCACCAAATCCATTTGGG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATGCTCATCTGGGTTCTaGAGCGCTTGTGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSCSSGF*SACDQA
Trigger: GGCCTGGTCACAAGCGCTTCAGAACCCAGATGAGCA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGAGGAGACGAAGTAGCTaGACTAGGAAACCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQRRRSS*TRKPKH
Trigger: ATGCTTGGGTTTCCTAGTTCAGCTACTTCGTCTCCT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTCTTGCAGGCTCTGCTaGTACTGTTGGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISCRLC*YCWYCC
Trigger: ACAGCAGTACCAACAGTATCAGCAGAGCCTGCAAGA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTCACAGGCAAGACACTaGTATTTGCTGACTGGGATG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQSQARH*YLLTGM
Trigger: CATCCCAGTCAGCAAATATCAGTGTCTTGCCTGTGA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTCTTTGTGCAAGCTTaGCTGGAGGTGTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLFVQA*LEVLTK
Trigger: CTTAGTCAACACCTCCAGTCAAGCTTGCACAAAGAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGGGGAGCAGACTGAGTaGGGTAATAATCTAACATGC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQGEQTE*GNNLTC
Trigger: GCATGTTAGATTATTACCTCACTCAGTCTGCTCCCC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTCTGCCCATTTTCCTaGCTTGAGATAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLCPFS*LEIGGE
Trigger: CTCTCCTCCTATCTCAAGGCAGGAAAATGGGCAGAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGACCTGAGTGGCAGCTaGATTCTCAATGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIDLSGS*ILNAET
Trigger: GGTTTCAGCATTGAGAATGCAGCTGCCACTCAGGTC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAAGTGGCACATTCGTTaGAGGGTATTTCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVKWHIR*RVFPLL
Trigger: CAGCAAAGGAAATACCCTGCAACGAATGTGCCACTT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAAAGAGTTTGCTGTTTaGCCCAGTCTGTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVKEFAV*PSLCIL
Trigger: CAGAATGCACAGACTGGGGCAAACAGCAAACTCTTT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTACTGAGGAGCCTCTaGTCCTCATCATTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLLRSL*SSSLRV
Trigger: GACTCTCAATGATGAGGAGCAGAGGCTCCTCAGTAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGAGTTCATTGGAATATaGATCCTCTTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCEFIGI*ILFILI
Trigger: GATGAGGATGAAGAGGATGCATATTCCAATGAACTC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTTAGGTGAACAGGGTTaGCAATGGCAATGCACTTCA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVLGEQG*QWQCTS
Trigger: TGAAGTGCATTGCCATTGGCAACCCTGTTCACCTAA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCCTGGCTCCCAAAGATaGTGTTTCAAGCTCATTCGC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIPGSQR*CFKLIR
Trigger: GCGAATGAGCTTGAAACAGCATCTTTGGGAGCCAGG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTTCAGAGGGTCTCCTaGATCTTCACTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLQRVS*IFTGFF
Trigger: GAAGAACCCAGTGAAGATGCAGGAGACCCTCTGAAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTGCTGTGACAGGACATaGATCTGGATCCGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHCCDRT*IWIRLW
Trigger: CCAAAGTCGGATCCAGATGCATGTCCTGTCACAGCA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGTAGCCGCCCGGATTaGATGATACTGGGAATGTAT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRCSRPD*MILGMY
Trigger: ATACATTCCCAGTATCATGCAATCCGGGCGGCTACA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCCCCAAGCTAAACTCTaGCCCAGGTATATAGAATGG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQPQAKL*PRYIEW
Trigger: CCATTCTATATACCTGGGGCAGAGTTTAGCTTGGGG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGCAAGGAACCAGCCATaGCAGTCATACCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSARNQP*QSYLAP
Trigger: GGGTGCCAGGTATGACTGGCATGGCTGGTTCCTTGC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGGTGCTGCACTGGCTaGATCATAATGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGCCTG*IIMEGK
Trigger: CTTTCCTTCCATTATGATGCAGCCAGTGCAGCACCC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGGGTGCTGCACTGGCTaGATCATAATGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIGCCTG*IIMEGK
Trigger: CTTTCCTTCCATTATGATGCAGCCAGTGCAGCACCC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCTCATAGCTCTTCCTTaGTTTCTGCCGAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLIALP*FLPSIL
Trigger: CAGAATGCTCGGCAGAAAGCAAGGAAGAGCTATGAG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGCAGGAACTGGTTTCTaGTGCTGTTCTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIAGTGF*CCSCCC
Trigger: GCAACAGCAAGAACAGCAGCAGAAACCAGTTCCTGC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGAGGTGTTGACTAAGTaGTTCATTCCCACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQEVLTK*FIPTES
Trigger: GCTCTCAGTGGGAATGAAGCACTTAGTCAACACCTC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAGCTTTCCTGGCGGATaGTTGGAAAAGGATATTAGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVSFPGG*LEKDIR
Trigger: CCTAATATCCTTTTCCAAGCATCCGCCAGGAAAGCT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTGTCCTCTAACTCGCTaGTCTCACTCTCGTCATCCT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNCPLTR*SHSRHP
Trigger: AGGATGACGAGAGTGAGACCAGCGAGTTAGAGGACA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTGGCTGAGCCATCACTaGTTAGATAGTCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVWLSHH*LDSLSL
Trigger: GAGAGAAAGACTATCTAACCAGTGATGGCTCAGCCA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAGTGCCAGTTACATTTaGGACATTTCAGGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSASYI*DISGFY
Trigger: GTAAAACCCTGAAATGTCCCAAATGTAACTGGCACT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGCATGTGCTTCTCACTaGTCATGTGAATCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHACASH*SCESGG
Trigger: ACCTCCGGATTCACATGACCAGTGAGAAGCACATGC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGCATGTGCTTCTCACTaGTCATGTGAATCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIACASH*SCESGG
Trigger: ACCTCCGGATTCACATGACCAGTGAGAAGCACATGC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACATCCTCAGCCACTGTaGGAGGCTTCAGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSHPQPL*EASEGL
Trigger: GAGACCCTCTGAAGCCTCCCACAGTGGCTGAGGATG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTTCTCCACACAGTCTaGAGACACACTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLLHTV*RHTVQM
Trigger: CATTTGCACAGTGTGTCTCCAGACTGTGTGGAGAAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGTACGGAAACTCCGCTaGCAGAGGGTACACATTGTA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNVRKLR*QRVHIV
Trigger: TACAATGTGTACCCTCTGCCAGCGGAGTTTCCGTAC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATCACTCAGTTCAGGATaGCCTGCTTCCAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRSLSSG*PASKCF
Trigger: GAAACACTTGGAAGCAGGCCATCCTGAACTGAGTGA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCTTGCCTTCCCTTCATaGTCCACCTCATATTCTCTC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLAFPS*STSYSL
Trigger: GAGAGAATATGAGGTGGACCATGAAGGGAAGGCAAG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCTTGTAAGGACGAGATaGATCGAGGAATTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLVRTR*IEEFFH
Trigger: ATGGAAAAATTCCTCGATCCATCTCGTCCTTACAAG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTCCAAGGTCGAGCTTTaGCTGTATGCAACACTGCAG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISKVEL*LYATLQ
Trigger: CTGCAGTGTTGCATACAGCCAAAGCTCGACCTTGGA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGACTCTAACATCCCTTaGCCAGGGCTATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHDSNIP*PGLFTA
Trigger: TGCTGTGAATAGCCCTGGCCAAGGGATGTTAGAGTC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTGAAGCTAAGCTCATaGACTCTAACATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLKLSS*TLTSLG
Trigger: GCCAAGGGATGTTAGAGTCCATGAGCTTAGCTTCAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCTTTGGCATCTAAGTaGGTATCTTTGCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSLASK*VSLLLT
Trigger: AGTCAACAGCAAAGATACCCACTTAGATGCCAAAGA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTCTCCAGTAATGCTTTaGCTGCATTTCCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHSPVML*LHFPWP
Trigger: GGGCCAGGGGAAATGCAGCCAAAGCATTACTGGAGA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAGGCGGTGGTGTTTCTaGGGAAGAAGGAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNRRWCF*GRRRNW
Trigger: CCAATTTCTCCTTCTTCCCCAGAAACACCACCGCCT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATGGAGGTGGAGGCGGTaGTGTTTCTGGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSWRWRR*CFWGRR
Trigger: CCTTCTTCCCCAGAAACACCACCGCCTCCACCTCCA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTCTCAGCCATTTCTTaGATCTGTTCTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAFSAIS*ICSSLG
Trigger: TCCAAGTGAAGAACAGATCCAAGAAATGGCTGAGAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGATCAGTGGCATCCATaGAGTCTTCCGTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRDQWHP*SLPFGF
Trigger: AAAGCCAAACGGAAGACTCCATGGATGCCACTGATC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGACAACACTTGATCAGTaGCATCCATGGAGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQTTLDQ*HPWSLP
Trigger: CGGAAGACTCCATGGATGCCACTGATCAAGTGTTGT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCATTCTTCTCAGGTTCTaGTTTAGGAGAAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCILLRF*FRRRNQ
Trigger: CTGATTCCTTCTCCTAAACCAGAACCTGAGAAGAAT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTCTGAAGAGAAGTCATaGAAATTTGCAGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVSEEKS*KFAVGW
Trigger: CCAGCCCACTGCAAATTTCCATGACTTCTCTTCAGA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGGTTGGGAAGGCTATaGTACACTGATCACATGGGT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGLGRL*YTDHMG
Trigger: ACCCATGTGATCAGTGTACCATAGCCTTCCCAACCC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCAAAGTTCCAGGGTTaGGAAGGCTATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPKFQG*EGYGTL
Trigger: CAGTGTACCATAGCCTTCCCAACCCTGGAACTTTGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTGGCGAGAGCGAATGTaGCTTTCTAAGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVWRERM*LSKADF
Trigger: AAAATCAGCCTTAGAAAGCCACATTCGCTCTCGCCA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCTCCCCCATCCTCTGTaGATATTAAAGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLPHPL*ILKGLV
Trigger: CACCAAGCCCTTTAATATCCACAGAGGATGGGGGAG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTTTAGGGGACAAAGCTaGTTTCACCTCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNFRGQS*FHLPRT
Trigger: GGTTCTGGGGAGGTGAAACCAGCTTTGTCCCCTAAA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTTAGGGGACAAAGCTaGTTTCACCTCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIFRGQS*FHLPRT
Trigger: GGTTCTGGGGAGGTGAAACCAGCTTTGTCCCCTAAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGGTGGGTGTGGTTGCTaGTTTTTGCAAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRGGCGC*FLQRVK
Trigger: CTTGACTCTTTGCAAAAACCAGCAACCACACCCACC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCACAGACCTCTGTGGTaGGTGTGGTTGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIHRPLW*VWLLVF
Trigger: AAAAACCAGCAACCACACCCACCACAGAGGTCTGTG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCAGTCTCCCTCACTTTaGAAATATGCTGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAQSPSL*KYAVWK
Trigger: TTTCCAAACAGCATATTTCCAAAGTGAGGGAGACTG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTGGTGGTGGAGGTGGTaGAGTCTGCAGCAAAGATTT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIWWWRW*SLQQRF
Trigger: AAATCTTTGCTGCAGACTCCACCACCTCCACCACCA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCCCAGGGATAAAGTATaGCAAGAACTGCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQPRDKV*QELPSY
Trigger: ATAGGAGGGCAGTTCTTGCCATACTTTATCCCTGGG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACACGAAGCAGCTTTCCTaGCGGATGCTTGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHTKQLS*RMLGKG
Trigger: TCCTTTTCCAAGCATCCGCCAGGAAAGCTGCTTCGT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 72 bp AAAACCTCAGGGTGCATTTCCTATGTAACCCAGGCATaGAGTGTACACGTTGTTGTAGACAATGATTGCGCT +
Preference number: 4 (lower is better)
Translates to: KTSGCISYVTQA*SVHVVVDNDCA
Trigger: AGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATAGGAAATGCACCCTGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCTGCATTCTCAATGCTaGAACCCAGCAAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQILHSQC*NPARLH
Trigger: GTGAAGTCTTGCTGGGTTTCAGCATTGAGAATGCAG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGGGGCCGTAGAAGACTaGTCACTCTTCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSGAVED*SLFSPA
Trigger: TGCTGGAGAGAAGAGTGATCAGTCTTCTACGGCCCC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATTGAGAGTCATCCGATaGTCATGTACAGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLRVIR*SCTAWV
Trigger: AACCCATGCTGTACATGATCATCGGATGACTCTCAA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTCACCGTTTTCAACATaGAAAGCGCTCCATAAACCG +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQSPFST*KALHKP
Trigger: CGGTTTATGGAGCGCTTTTCATGTTGAAAACGGTGA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTCTCTCTCCATTTCCTaGTCTATGCCATGGTCATCC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSLSIS*SMPWSS
Trigger: GGATGACCATGGCATAGATCAGGAAATGGAGAGAGA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGTTCTTTTGGGTAAATaGCTCTTTACACACTGTACA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAVLLGK*LFTHCT
Trigger: TGTACAGTGTGTAAAGAGTCATTTACCCAAAAGAAC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTGCTGCAACTCGTGCTaGAGTTGCATCTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHCCNSC*SCIWIC
Trigger: ACAAATCCAGATGCAACTTCAGCACGAGTTGCAGCA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGTTGACAAAGCTGAGTaGGATCTGCTGAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHVDKAE*DLLRGC
Trigger: ACACCCTCTCAGCAGATCTCACTCAGCTTTGTCAAC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTGCTTGTACAACACTTaGTCAGTGGCATCCATGGAG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNCLYNT*SVASME
Trigger: CTCCATGGATGCCACTGATCAAGTGTTGTACAAGCA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCCATCTGTTCCACTTTaGTTGATCATGAACGGCTTT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVPSVPL*LIMNGF
Trigger: AAAGCCGTTCATGATCAATCAAAGTGGAACAGATGG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTTGACTGGAGGTGTTaGCTAAGTGCTTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLDWRC*LSASFP
Trigger: TGGGAATGAAGCACTTAGTCAACACCTCCAGTCAAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTCTTTGTGCAAGCTTaGCTGGAGGTGTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLFVQA*LEVLTK
Trigger: CTTAGTCAACACCTCCAGTCAAGCTTGCACAAAGAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTTACTGAGGAGCCTCTaGTCCTCATCATTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLLRSL*SSSLRV
Trigger: GACTCTCAATGATGAGGAGCAGAGGCTCCTCAGTAA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGAGGTTCTTTGTCTTTaGCAATCCCCTGTATTATGG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVEVLCL*QSPVLW
Trigger: CCATAATACAGGGGATTGGCAAAGACAAAGAACCTC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAAGGCAAAGCCAGCCTaGAAAGAGTCACCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIKAKPA*KESPFS
Trigger: TGAAAACGGTGACTCTTTGCAGGCTGGCTTTGCCTT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGACTGATACTTCCGTCTaGAAAGTCCTTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQTDTSV*KVLATN
Trigger: ATTGGTGGCAAGGACTTTGCAGACGGAAGTATCAGT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGACACCTGCTCGCCATTaGCATTTTGAAGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVTPARH*HFEDSE
Trigger: TTCAGAATCTTCAAAATGGCAATGGCGAGCAGGTGT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATACTGGCTGTACAGAGTaGTGTGACAGGACATGCATC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHTGCTE*CDRTCI
Trigger: GATGCATGTCCTGTCACAGCACTCTGTACAGCCAGT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAGATGCAGCTGCAGGTaGATCTTGTTGCTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHRCSCR*ILLLRT
Trigger: TGTTCTCAGCAACAAGATGCACCTGCAGCTGCATCT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTCCACAGGCTCCTTTaGTGGCTTCTGTTCCTCATT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLHRLL*WLLFLI
Trigger: AATGAGGAACAGAAGCCAGCAAAGGAGCCTGTGGAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCATTTCCTGATCTATaGCATGGTCATCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPFPDL*HGHPGS
Trigger: TGACCCAGGATGACCATGGCATAGATCAGGAAATGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGCTTATTATCTGTGCTaGTATTGGCTTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNAYYLC*YWLPGG
Trigger: TCCCCCAGGAAGCCAATAGCAGCACAGATAATAAGC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACATGCAACACTGCAGGTaGTGCACTTGTAGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHMQHCR*CTCRAY
Trigger: ATAAGCCCTACAAGTGCAGCACCTGCAGTGTTGCAT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCCCCAAGCTAAACTCTaGCCCAGGTATATAGAATGG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIPQAKL*PRYIEW
Trigger: CCATTCTATATACCTGGGGCAGAGTTTAGCTTGGGG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCAGCCCCACTTCCCGTaGAATGTGATCAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHQPHFP*NVIKHF
Trigger: AAAATGCTTGATCACATTGCACGGGAAGTGGGGCTG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTGTGGTGGGTGTGGTTaGTGGTTTTTGCAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHCGGCG*WFLQRV
Trigger: GACTCTTTGCAAAAACCAGCAACCACACCCACCACA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTAAACTTCTTTTCCTTTaGCCTAGCATTCTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAKLLFL*PSILKP
Trigger: TGGTTTCAGAATGCTAGGGCAAAGGAAAAGAAGTTT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGAGCCCAGGGTAGGCTaGTTGCAAGCTGATACCATG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSEPRVG*LQADTM
Trigger: CATGGTATCAGCTTGCAAGCAGCCTACCCTGGGCTC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGGAACTGGTTTCTGCTaGTGTTCTTGCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRGTGFC*CSCCCF
Trigger: AAAGCAACAGCAAGAACAGCAGCAGAAACCAGTTCC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGAACTGGGAAAAGAAGTaGCACATTCGTTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQNWEKK*HIRCRV
Trigger: TACCCTGCAACGAATGTGCCACTTCTTTTCCCAGTT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAAACTGGGAAAAGAAGTaGCACATTCGTTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRNWEKK*HIRCRV
Trigger: TACCCTGCAACGAATGTGCCACTTCTTTTCCCAGTT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGAACCGTGTCACATTTTaGACACTCAATGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQNRVTF*TLNAIA
Trigger: GGCAATGGCATTGAGTGTCCAAAATGTGACACGGTT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCGTCCTCACCATTCCTaGCTCCCAAAGATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHRPHHS*LPKMLF
Trigger: AAACAGCATCTTTGGGAGCCAGGAATGGTGAGGACG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCACAGGCTCCTTTGCTaGCTTCTGTTCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHHRLLC*LLFLIL
Trigger: AAGAATGAGGAACAGAAGCCAGCAAAGGAGCCTGTG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTATGTCCTTCATGAGTTaGCAGTCTGTACTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIMSFMS*QSVLAR
Trigger: CCTGGCAAGTACAGACTGCCAACTCATGAAGGACAT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACACAACACTTGATCAGTaGCATCCATGGAGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHTTLDQ*HPWSLP
Trigger: CGGAAGACTCCATGGATGCCACTGATCAAGTGTTGT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGGGTTGCAGTGCTTTTaGCTGTATCTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIGLQCF*LYLFVQ
Trigger: CTGGACAAACAGATACAGCCAAAAGCACTGCAACCC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGGCGAGAGCGAATGTaGCTTTCTAAGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRWRERM*LSKADF
Trigger: AAAATCAGCCTTAGAAAGCCACATTCGCTCTCGCCA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGTGGGTGTGGTTGCTaGTTTTTGCAAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGGCGC*FLQRVK
Trigger: CTTGACTCTTTGCAAAAACCAGCAACCACACCCACC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTTTCACATTCTTGCATaGTTGGAGTCCGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVFHILA*LESDSH
Trigger: GTGACTATCGGACTCCAACCATGCAAGAATGTGAAA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACACAGAGGGTACACTCTaGCTTAGTACCATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHTEGTL*LSTICS
Trigger: GGAACAGATGGTACTAAGCCAGAGTGTACCCTCTGT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACACAGAGGGTACACTCTaGCTTAGTACCATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNTEGTL*LSTICS
Trigger: GGAACAGATGGTACTAAGCCAGAGTGTACCCTCTGT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAAAATATGATCTCGGATaGACAAGCGGGCAGAGTACT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRKYDLG*TSGQST
Trigger: AGTACTCTGCCCGCTTGTCCATCCGAGATCATATTT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAAAACTCTGCACTCTTaGAATCTAACTGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCKTLHS*NLTGLL
Trigger: AAGAAGTCCAGTTAGATTCCAAGAGTGCAGAGTTTT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAAGTCTTGTAGCTTCTaGCTCAGCTCACTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNKSCSF*LSSLSD
Trigger: GTCTGACAGTGAGCTGAGCCAGAAGCTACAAGACTT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTCAATTATATACGCTaGTCCATCAGGCTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLNYIR*SIRLVN
Trigger: GTTTACCAGCCTGATGGATCAGCGTATATAATTGAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTGGTTTCCCGAGGGATaGAGCAATATGAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQWFPEG*SNMKSV
Trigger: AACACTTTTCATATTGCTTCATCCCTCGGGAAACCA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTCTGCTCCTCATCATTaGGAGTCATCCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSAPHH*ESSDDH
Trigger: ATGATCATCGGATGACTCTCAATGATGAGGAGCAGA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTTGGTCTTTGCTCTCTaGCATCTTGCTAGACTCAGA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLVFAL*HLARLR
Trigger: TCTGAGTCTAGCAAGATGTCAGAGAGCAAAGACCAA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGGAGTCCTCAAGCCCTaGCATGCTTTTGTCATCCAC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSGVLKP*HAFVIH
Trigger: GTGGATGACAAAAGCATGTCAGGGCTTGAGGACTCC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAGAAACTGGGGTTGCTaGAACTGGAGCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSRNWGC*NWSSAS
Trigger: AGAGGCACTGCTCCAGTTTCAGCAACCCCAGTTTCT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGGATGATCTTTTGCTaGATGCGGCATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRWMIFC*MRHLIC
Trigger: ACAAATCAGATGCCGCATTCAGCAAAAGATCATCCA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCGTCAGGGTCATCCGTaGTGTAAAAGCTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHRQGHP*CKSFGH
Trigger: ATGACCAAAGCTTTTACATCACGGATGACCCTGACG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTCACAGGCAAGACACTaGTATTTGCTGACTGGGATG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHSQARH*YLLTGM
Trigger: CATCCCAGTCAGCAAATATCAGTGTCTTGCCTGTGA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCACATAGCTTTGATGTaGTCTGCCCATTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHHIALM*SAHFPA
Trigger: GGCAGGAAAATGGGCAGAGCACATCAAAGCTATGTG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCTGTTGAAAAGAGTTTaGTGTTTGCCCCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLLKRV*CLPQSV
Trigger: CACAGACTGGGGCAAACAGCAAACTCTTTTCAACAG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAGAAGCATCATGTTGTaGATGTGCTTCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNRSIML*MCFSLV
Trigger: GACCAGTGAGAAGCACATGCACAACATGATGCTTCT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGTTTCATGTTCTGCTaGAGAAGCATCATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRCFMFC*RSIMLC
Trigger: GCACAACATGATGCTTCTGCAGCAGAACATGAAACA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGATCTGTTTCATGTTCTaGTGCAGAAGCATCATGTTG +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVICFMF*CRSIML
Trigger: CAACATGATGCTTCTGCAGCAGAACATGAAACAGAT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGTTGTCTCTCTTGTGTaGCTCTTTCTCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNVVSLV*LFLIIL
Trigger: GAGGATGATGAGAAAGAGGCACACAAGAGAGACAAC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAGATGCAGCTGCAGGTaGATCTTGTTGCTGAGAACA +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHRCSCR*ILLLRT
Trigger: TGTTCTCAGCAACAAGATGCACCTGCAGCTGCATCT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTCATAGCTCTTCCTTaGTTTCTGCCGAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLIALP*FLPSIL
Trigger: CAGAATGCTCGGCAGAAAGCAAGGAAGAGCTATGAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTATTATCTTTAGCTTCTaGTTGGTTCTCATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAIIFSF*LVLIAL
Trigger: AAGAGCTATGAGAACCAAGCAGAAGCTAAAGATAAT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGATCCTCTGGACATTCTaGTTTGAAAGAAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVILWTF*FERRRT
Trigger: AGTCCTTCTTCTTTCAAAGCAGAATGTCCAGAGGAT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGAAGTATGGCAAGAACTaGCCTCCTATAAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQKYGKN*PPIKDA
Trigger: AGCATCCTTTATAGGAGGGCAGTTCTTGCCATACTT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGGAACTGGTTTCTGCTaGTGTTCTTGCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIGTGFC*CSCCCF
Trigger: AAAGCAACAGCAAGAACAGCAGCAGAAACCAGTTCC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGGACTTCTTCTTTTGTaGTTTCGGGAGCAGTACTTT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRGLLLL*FREQYF
Trigger: AAAGTACTGCTCCCGAAAGCACAAAAGAAGAAGTCC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGATTGTTTTCTCTTTGTaGAAGCTTGACTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVIVFSL*KLDWRC
Trigger: ACACCTCCAGTCAAGCTTGCACAAAGAGAAAACAAT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCGGGCATTAGGGCAGTaGTGTTCCATATATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHRALGQ*CSIYFC
Trigger: ACAGAAATATATGGAACACCACTGCCCTAATGCCCG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCGGGCATTAGGGCAGTaGTGTTCCATATATTTCTGT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNRALGQ*CSIYFC
Trigger: ACAGAAATATATGGAACACCACTGCCCTAATGCCCG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACACACACAGGAGTTTTTaGCTGAGCCATCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHTHRSF*LSHHWL
Trigger: TAACCAGTGATGGCTCAGCCAAAAACTCCTGTGTGT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACACACACAGGAGTTTTTaGCTGAGCCATCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNTHRSF*LSHHWL
Trigger: TAACCAGTGATGGCTCAGCCAAAAACTCCTGTGTGT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCAATCCCCTGTATTATaGCGGAGACGCATTTATTAC +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQQSPVL*RRRIYY
Trigger: GTAATAAATGCGTCTCCGCCATAATACAGGGGATTG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGTTCACTTCAGCCTTTaGCATGTGGGTGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSVHFSL*HVGDPQ
Trigger: CTGGGGATCACCCACATGCCAAAGGCTGAAGTGAAC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGAACAGGGTTGCCAATaGCAATGCACTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSEQGCQ*QCTSAS
Trigger: GGAGGCTGAAGTGCATTGCCATTGGCAACCCTGTTC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTTCTCCACACAGTCTaGAGACACACTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLLHTV*RHTVQM
Trigger: CATTTGCACAGTGTGTCTCCAGACTGTGTGGAGAAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTGGCCTTTGTCTGGTaGAGCACTGATCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSLAFVW*STDLMW
Trigger: CCACATGAGATCAGTGCTCCACCAGACAAAGGCCAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGTGGTGGGTGATGGGTaGGTTGTGCAGAGATTAATT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHVVGDG*VVQRLI
Trigger: AATTAATCTCTGCACAACCCACCCATCACCCACCAC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACCCAGGTATATAGAATaGAAAGAGAAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRPRYIE*KEKLGL
Trigger: CAACCCCAGTTTCTCTTTCCATTCTATATACCTGGG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAGCAGATACTGTGTTTaGGATTTTCACAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQISRYCV*DFHRPQ
Trigger: TTGGGGCCTGTGAAAATCCCAAACACAGTATCTGCT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTGCACTTTTTGCATTaGTATTGCATGTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCLHFLH*YCMLLV
Trigger: AACAAGCAACATGCAATACCAATGCAAAAAGTGCAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTATGGAGTCTTCCGTTTaGCTTTCATCTTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIMESSV*LSSWAS
Trigger: TGATGCCCAAGATGAAAGCCAAACGGAAGACTCCAT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTCTGAAGAGAAGTCATaGAAATTTGCAGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSEEKS*KFAVGW
Trigger: CCAGCCCACTGCAAATTTCCATGACTTCTCTTCAGA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTTCTGGAACCAGACTTaGACCACTCTTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNFWNQT*TTLFFS
Trigger: GCTGAAGAAAAGAGTGGTCCAAGTCTGGTTCCAGAA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGACTTAAAAGATTTTTaGGTGACAGTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLHIVLTARTDRSHNAAADLKDF*VTVLLF
Trigger: AAACAGCAGAACTGTCACCCAAAAATCTTTTAAGTC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACATCACAGACCTCTGTaGTGGGTGTGGTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSHHRPL*WVWLLV
Trigger: AACCAGCAACCACACCCACCACAGAGGTCTGTGATG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACCTGCACCACTCGTTTaGGCAGACCAATCTCATTGC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSPAPLV*ADQSHC
Trigger: GCAATGAGATTGGTCTGCCCAAACGAGTGGTGCAGG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCAGTCTCCCTCACTTTaGAAATATGCTGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVQSPSL*KYAVWK
Trigger: TTTCCAAACAGCATATTTCCAAAGTGAGGGAGACTG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCCCAGGGATAAAGTATaGCAAGAACTGCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHPRDKV*QELPSY
Trigger: ATAGGAGGGCAGTTCTTGCCATACTTTATCCCTGGG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACGCCTTTGGCTGTCTTaGCAGGAACTGGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSRLWLS*QELVSA
Trigger: AGCAGAAACCAGTTCCTGCCAAGACAGCCAAAGGCG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTACTTTTCTCTTCCTTaGTTTCCGAAGCCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNYFSLP*FPKPRW
Trigger: CCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCTGATATTTGCTGACTaGGATGCGAAGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLIFAD*DAKHCF
Trigger: GAAACAGTGCTTCGCATCCCAGTCAGCAAATATCAG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTTCCTGGCGGATGCTTaGAAAAGGATATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHFLADA*KRILGQ
Trigger: CTGGCCTAATATCCTTTTCCAAGCATCCGCCAGGAA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCTGAACAACTTTCTGTaGGTAGTGAGGTTTGAACCC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQILNNFL*VVRFEP
Trigger: GGGTTCAAACCTCACTACCCACAGAAAGTTGTTCAG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCTCAATTATATACGCTaGTCCATCAGGCTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLNYIR*SIRLVN
Trigger: GTTTACCAGCCTGATGGATCAGCGTATATAATTGAG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTGCATCATAGTCATGTaGCCACCAAGAGACCTTGAA +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHCIIVM*PPRDLE
Trigger: TTCAAGGTCTCTTGGTGGTCACATGACTATGATGCA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTGTTTGATGACTTTTTaGGAGAGGCCAGATTTCTCA +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQCLMTF*ERPDFS
Trigger: TGAGAAATCTGGCCTCTCTCAAAAAGTCATCAAACA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGCTTTTTCTGATGTGTaGTCAAGTCAAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNAFSDV*SSQRSW
Trigger: CCAGGATCTTTGACTTGATCACACATCAGAAAAAGC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATGGAGGAATTGGTTTTaGGCAGCGAGGAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSWRNWF*AARKCM
Trigger: CATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACGTTTATCACGGTGTTaGTCTTCACCGCTATTCCCG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSRLSRC*SSPLFP
Trigger: CGGGAATAGCGGTGAAGATCAACACCGTGATAAACG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGGCCGTATTAATAGATaGGGTCTCATCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIGRINR*GLIKVS
Trigger: ACTGACTTTGATGAGACCTCATCTATTAATACGGCC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCACCATCTTTGTCATTaGAGTGGATTGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNHHLCH*SGLMDL
Trigger: CAAGTCCATCAATCCACTTCAATGACAAAGATGGTG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTTGAGGACCTTTAGTTaGAGATTGCTCATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLRTFS*RLLIWV
Trigger: AACCCAGATGAGCAATCTTCAACTAAAGGTCCTCAA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCCATCTGTTCCACTTTaGTTGATCATGAACGGCTTT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNPSVPL*LIMNGF
Trigger: AAAGCCGTTCATGATCAATCAAAGTGGAACAGATGG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAACAATACAAGTATCTaGAAACTCTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVNNTSI*KLCTLG
Trigger: TCCAAGAGTGCAGAGTTTTCAGATACTTGTATTGTT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGTTGTCTCTCTTGTGTaGCTCTTTCTCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHVVSLV*LFLIIL
Trigger: GAGGATGATGAGAAAGAGGCACACAAGAGAGACAAC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTGAAACTGGAGCAGTaGCTCTGGGGTCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSLKLEQ*LWGHWK
Trigger: TTTCCAATGACCCCAGAGGCACTGCTCCAGTTTCAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTTCAGTCACCTCTTCTaGCTCCTTGTAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHFSHLF*LLVRWH
Trigger: ATGCCATCTTACAAGGAGGCAGAAGAGGTGACTGAA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATGGCAAGCTATAACCTaGCTGCTTCCCCTCATTCCA +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSWQAIT*LLPLIP
Trigger: TGGAATGAGGGGAAGCAGGCAGGTTATAGCTTGCCA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAAGTATGGCAAGAACTaGCCTCCTATAAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIKYGKN*PPIKDA
Trigger: AGCATCCTTTATAGGAGGGCAGTTCTTGCCATACTT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGACTTCTTCTTTTGTaGTTTCGGGAGCAGTACTTT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGLLLL*FREQYF
Trigger: AAAGTACTGCTCCCGAAAGCACAAAAGAAGAAGTCC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGATTGTTTTCTCTTTGTaGAAGCTTGACTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQIVFSL*KLDWRC
Trigger: ACACCTCCAGTCAAGCTTGCACAAAGAGAAAACAAT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTCACAGTTGTTCTCTTaGTCTTTGCTCTCTGACATC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSQLFS*SLLSDI
Trigger: GATGTCAGAGAGCAAAGACCAAGAGAACAACTGTGA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGAGCTCACCATTCATTaGCAAGGAGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSELTIH*QGGIEL
Trigger: CAGCTCTATGCCTCCTTGCCAATGAATGGTGAGCTC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCTTGTAAGGACGAGATaGATCGAGGAATTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLVRTR*IEEFFH
Trigger: ATGGAAAAATTCCTCGATCCATCTCGTCCTTACAAG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCCCAGGTATATAGAATaGAAAGAGAAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHPRYIE*KEKLGL
Trigger: CAACCCCAGTTTCTCTTTCCATTCTATATACCTGGG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTTTCAACAGTTTGCTTaGTTGCTGTTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNFQQFA*LLLRLL
Trigger: CAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTTCTGCCGAGCATTCTaGAACCATACAACAATAACC +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNFCRAF*NHTTIT
Trigger: GGTTATTGTTGTATGGTTCCAGAATGCTCGGCAGAA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTTCTGCCGAGCATTCTaGAACCATACAACAATAACC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHFCRAF*NHTTIT
Trigger: GGTTATTGTTGTATGGTTCCAGAATGCTCGGCAGAA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAATTCTTCTCAGGTTCTaGTTTAGGAGAAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRILLRF*FRRRNQ
Trigger: CTGATTCCTTCTCCTAAACCAGAACCTGAGAAGAAT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAAATTTGCAGTGGGCTaGAAGGGATTGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHKFAVG*KGLEFV
Trigger: CACAAACTCCAATCCCTTCCAGCCCACTGCAAATTT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACCAAAGTTCCAGGGTTaGGAAGGCTATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSPKFQG*EGYGTL
Trigger: CAGTGTACCATAGCCTTCCCAACCCTGGAACTTTGG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACACATTCTTGCATGGTTaGAGTCCGATAGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNTFLHG*SPIVTE
Trigger: TTCAGTGACTATCGGACTCCAACCATGCAAGAATGT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTACTTTTCTCTTCCTTaGTTTCCGAAGCCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHYFSLP*FPKPRW
Trigger: CCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAGCATGGGTTACAAATaGCCTGATATAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSMGYK*PDIAKR
Trigger: TCTTTTGGCTATATCAGGTCATTTGTAACCCATGCT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATATCCTCTGTAGGTTTTaGCCTTTTGGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHILCRF*PFGSCV
Trigger: AACACAGGAACCAAAAGGTCAAAACCTACAGAGGAT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGGTTTTATTCCATTCTaGTGCCTCCACAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSGFIPF*CLHRLL
Trigger: AAGGAGCCTGTGGAGGCATCAGAATGGAATAAAACC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTGTTGTTCATTCAGTTaGTCTTGTAGAGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQICCSFS*SCRASE
Trigger: CTCAGATGCTCTACAAGATCAACTGAATGAACAACA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATACTGGGAATGTATCTaGAGCTTCTGCATAGTTTTA +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRYWECI*SFCIVL
Trigger: TAAAACTATGCAGAAGCTTCAGATACATTCCCAGTA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACATGCAAGTGAGACACTaGATTATAATGGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNMQVRH*IIMDQE
Trigger: CTCTTGGTCCATTATAATTCAGTGTCTCACTTGCAT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACATGCAAGTGAGACACTaGATTATAATGGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHMQVRH*IIMDQE
Trigger: CTCTTGGTCCATTATAATTCAGTGTCTCACTTGCAT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGGGTATCTTTGCTGTTaGCTGAAGCTAAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSGYLCC*LKLSSW
Trigger: CCATGAGCTTAGCTTCAGTCAACAGCAAAGATACCC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAATGGCATGTCCTTCATaGGTTGGCAGTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSMACPS*VGSLYL
Trigger: CAAGTACAGACTGCCAACTCATGAAGGACATGCCAT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGGAGGTAGACTGTTCTaGAGAGAAGTCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHGGRLF*REVMEI
Trigger: AATTTCCATGACTTCTCTTCAGAACAGTCTACCTCC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACTGGACATTCTGCTTTaGAAGAAGAAGGACTTAAAA +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLDILL*KKKDLK
Trigger: TTTTAAGTCCTTCTTCTTTCAAAGCAGAATGTCCAG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACGTCAGGGTCATCCGTaGTGTAAAAGCTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSRQGHP*CKSFGH
Trigger: ATGACCAAAGCTTTTACATCACGGATGACCCTGACG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACCCAAATGGATTTGGTaGACTGGGATCAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSPKWIW*TGISYA
Trigger: AGCATAGCTGATCCCAGTTCACCAAATCCATTTGGG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTTGAGGACCTTTAGTTaGAGATTGCTCATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLRTFS*RLLIWV
Trigger: AACCCAGATGAGCAATCTTCAACTAAAGGTCCTCAA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGGGGAGCAGACTGAGTaGGGTAATAATCTAACATGC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSGEQTE*GNNLTC
Trigger: GCATGTTAGATTATTACCTCACTCAGTCTGCTCCCC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGAGGTTCTTTGTCTTTaGCAATCCCCTGTATTATGG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHEVLCL*QSPVLW
Trigger: CCATAATACAGGGGATTGGCAAAGACAAAGAACCTC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGTTCACATCCTTACTaGTGGTTTTATTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRCSHPY*WFYSIL
Trigger: CAGAATGGAATAAAACCAGCAGTAAGGATGTGAACA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGATTATCTTTAGCTTCTaGTTGGTTCTCATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVIIFSF*LVLIAL
Trigger: AAGAGCTATGAGAACCAAGCAGAAGCTAAAGATAAT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCCACATTGCACTTTTTaGATTGGTATTGCATGTTGC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHPHCTF*IGIACC
Trigger: GCAACATGCAATACCAATGCAAAAAGTGCAATGTGG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACAGCCCCACTTCCCGTaGAATGTGATCAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSQPHFP*NVIKHF
Trigger: AAAATGCTTGATCACATTGCACGGGAAGTGGGGCTG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTATCCTCTGGACATTCTaGTTTGAAAGAAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIILWTF*FERRRT
Trigger: AGTCCTTCTTCTTTCAAAGCAGAATGTCCAGAGGAT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAGTGCCAGTTACATTTaGGACATTTCAGGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSASYI*DISGFY
Trigger: GTAAAACCCTGAAATGTCCCAAATGTAACTGGCACT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACACAGGCTCCTTTGCTaGCTTCTGTTCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSHRLLC*LLFLIL
Trigger: AAGAATGAGGAACAGAAGCCAGCAAAGGAGCCTGTG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTTGAGGGTCAATCAATaGCTGACCGAAATAACAGAA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLRVNQ*LTEITE
Trigger: TTCTGTTATTTCGGTCAGCCATTGATTGACCCTCAA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
3UTR CAA 72 bp CCTGCATTAGTCTTCTTCACCACATACCATCCTATATaGCCAGCATATCAATATGGGAAAAACAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: PALVFFTTYHPI*PAYQYGKNNPE
Trigger: CTCAGGATTGTTTTTCCCATATTGATATGCTGGCAATATAGGATGGTATGTGGTGAAGAAGACTAATGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATTGAGAGTCATCCGATaGTCATGTACAGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSLRVIR*SCTAWV
Trigger: AACCCATGCTGTACATGATCATCGGATGACTCTCAA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATCTGCTCCTCATCATTaGGAGTCATCCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSSAPHH*ESSDDH
Trigger: ATGATCATCGGATGACTCTCAATGATGAGGAGCAGA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTACCAATACTATCTGTaGGTTCACCTAATACTTCCT +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIYQYYL*VHLILP
Trigger: AGGAAGTATTAGGTGAACTCACAGATAGTATTGGTA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTACCAATACTATCTGTaGGTTCACCTAATACTTCCT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNYQYYL*VHLILP
Trigger: AGGAAGTATTAGGTGAACTCACAGATAGTATTGGTA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATGCATCATAGTCATGTaGCCACCAAGAGACCTTGAA +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSCIIVM*PPRDLE
Trigger: TTCAAGGTCTCTTGGTGGTCACATGACTATGATGCA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAACTTCCCGTGCAATGTaGTCAAGCATTTTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSTSRAM*SSIFRV
Trigger: TACCCGAAAAATGCTTGATCACATTGCACGGGAAGT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTGGACATTCTGCTTTaGAAGAAGAAGGACTTAAAA +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLDILL*KKKDLK
Trigger: TTTTAAGTCCTTCTTCTTTCAAAGCAGAATGTCCAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAACAATACAAGTATCTaGAAACTCTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQINNTSI*KLCTLG
Trigger: TCCAAGAGTGCAGAGTTTTCAGATACTTGTATTGTT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTGTTGAAAAGAGTTTaGTGTTTGCCCCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSLLKRV*CLPQSV
Trigger: CACAGACTGGGGCAAACAGCAAACTCTTTTCAACAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTTGTTTCAACAGTTTaGTTGGTTGCTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLVSTV*LVAVEV
Trigger: AACCTCAACAGCAACCAAGCAAACTGTTGAAACAAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAAACTTCTTTTCCTTTaGCCTAGCATTCTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHKLLFL*PSILKP
Trigger: TGGTTTCAGAATGCTAGGGCAAAGGAAAAGAAGTTT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCATTCGGGTGTAAGATaGTACTTTCTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHHSGVR*YFLLAF
Trigger: AAAGGCCAAAAGAAAGTACCATCTTACACCCGAATG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAAAAGGAGAAATGCTTTaGTTTAAGAGAGGGAAATCT +
Preference number: 4 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRKGEML*FKRGKS
Trigger: AGATTTCCCTCTCTTAAACCAAAGCATTTCTCCTTT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAACCGTGTCACATTTTaGACACTCAATGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSNRVTF*TLNAIA
Trigger: GGCAATGGCATTGAGTGTCCAAAATGTGACACGGTT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTCTTTGGCATCTAAGTaGGTATCTTTGCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHSLASK*VSLLLT
Trigger: AGTCAACAGCAAAGATACCCACTTAGATGCCAAAGA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTTCTCAGCCATTTCTTaGATCTGTTCTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHFSAIS*ICSSLG
Trigger: TCCAAGTGAAGAACAGATCCAAGAAATGGCTGAGAA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTCTTGGAATCTAACTaGACTTCTTCTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLLESN*TSSFVL
Trigger: AAGCACAAAAGAAGAAGTCCAGTTAGATTCCAAGAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAAAACTCTGCACTCTTaGAATCTAACTGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: LLGVTLLTNADQTVAALHKTLHS*NLTGLL
Trigger: AAGAAGTCCAGTTAGATTCCAAGAGTGCAGAGTTTT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTCAGAATTTTTAGCTaGTCATCTGTAATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSLRIFS*SSVIRV
Trigger: GACCCGGATTACAGATGATCAGCTAAAAATTCTGAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATGTTTCATGTTCTGCTaGAGAAGCATCATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSCFMFC*RSIMLC
Trigger: GCACAACATGATGCTTCTGCAGCAGAACATGAAACA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTGTTCACATCCTTACTaGTGGTTTTATTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHCSHPY*WFYSIL
Trigger: CAGAATGGAATAAAACCAGCAGTAAGGATGTGAACA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR GCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGCAGACCAATCTCATTaGCCAGCATTTCACATTCTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSADQSH*PAFHIL
Trigger: AAGAATGTGAAATGCTGGGCAATGAGATTGGTCTGC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACAATCCCCTGTATTATaGCGGAGACGCATTTATTAC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSQSPVL*RRRIYY
Trigger: GTAATAAATGCGTCTCCGCCATAATACAGGGGATTG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAGGATATTCAGTTTTTaGAGAATTCTTCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIRIFSF*RILLRF
Trigger: GAACCTGAGAAGAATTCTCCAAAAACTGAATATCCT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATTTCACATTCTTGCATaGTTGGAGTCCGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSFHILA*LESDSH
Trigger: GTGACTATCGGACTCCAACCATGCAAGAATGTGAAA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTCTTGGAATCTAACTaGACTTCTTCTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLLESN*TSSFVL
Trigger: AAGCACAAAAGAAGAAGTCCAGTTAGATTCCAAGAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACATTCGGGTGTAAGATaGTACTTTCTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSHSGVR*YFLLAF
Trigger: AAAGGCCAAAAGAAAGTACCATCTTACACCCGAATG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTTGCACTTTTTGCATTaGTATTGCATGTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLHFLH*YCMLLV
Trigger: AACAAGCAACATGCAATACCAATGCAAAAAGTGCAA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATTGAGGGTCAATCAATaGCTGACCGAAATAACAGAA +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSLRVNQ*LTEITE
Trigger: TTCTGTTATTTCGGTCAGCCATTGATTGACCCTCAA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR TCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATACTGGGAATGTATCTaGAGCTTCTGCATAGTTTTA +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSYWECI*SFCIVL
Trigger: TAAAACTATGCAGAAGCTTCAGATACATTCCCAGTA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAAAGGAGAAATGCTTTaGTTTAAGAGAGGGAAATCT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSKGEML*FKRGKS
Trigger: AGATTTCCCTCTCTTAAACCAAAGCATTTCTCCTTT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAGGATATTCAGTTTTTaGAGAATTCTTCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSRIFSF*RILLRF
Trigger: GAACCTGAGAAGAATTCTCCAAAAACTGAATATCCT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CCA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGACTTAAAAGATTTTTaGGTGACAGTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AASLLSREANIPFHNFCSDLKDF*VTVLLF
Trigger: AAACAGCAGAACTGTCACCCAAAAATCTTTTAAGTC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS CCA 90 bp TGGGGGTGGAGGTGGTGGAGGAGGAGGAGGAGGAGGTGGAGGCGGTaGAGGAGTGGGTGGTGGAGCTTGCAGAGGAGCAGATACTGTGTT +
Preference number: 5 (lower is better)
Translates to: WGWRWWRRRRRRWRR*RSGWWSLQRSRYCV
Trigger: AACACAGTATCTGCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTCCACCTCCTCCTCCTCCTCCTCCACCACCTCCACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp GGGAGCCATCTCCTCCAGGACCTGGTGTACCAGGTGTGCTCGGGGTaGAGCCATGCTGGTGTGTTGTTGAACTGTCCTCGTCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: GSHLLQDLVYQVCSG*SHAGVLLNCPRLHG
Trigger: CCCATGGAGACGAGGACAGTTCAACAACACACCAGCATGGCTTCACCCCGAGCACACCTGGTACACCAGGTCCTGGAGGAGATGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp AGAGAGGATGGAGGAGGAGGAGGTGGTGGTGGAGGTGGTGGAGTCTaGAGCAAAGATTTGGTGGGGCCACTGCTGAGAGACAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: REDGGGGGGGGGGGV*SKDLVGPLLRDRAG
Trigger: TCCTGCCCTGTCTCTCAGCAGTGGCCCCACCAAATCTTTGCTGCAGACTCCACCACCTCCACCACCACCTCCTCCTCCTCCATCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GAGGTGGTGGAGGAGGAGGAGGAGGAGGTGGAGGCGGTGGAGGAGTaGGTGGTGGAGCTTGCAGAGGAGCAGATACTGTGTTTGGGATTT +
Preference number: 5 (lower is better)
Translates to: EVVEEEEEEVEAVEE*VVELAEEQILCLGF
Trigger: AAATCCCAAACACAGTATCTGCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTCCACCTCCTCCTCCTCCTCCTCCACCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GAGTTTGTGACGCTGAGGGAGGTCTTCCAATCAGTTGGGGTTGCTTaGGCGGCTGTGTTGGAGGCTGGGGTATGGACGCCTGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: EFVTLREVFQSVGVA*AAVLEAGVWTPAVA
Trigger: AGCCACAGCAGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCTCCCTCAGCGTCACAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp AGCGACACTCGCAGGGGCGGTAGTGTGGGCAGTACTGGTCTGTGGTaGCATTTGAGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCATCAG +
Preference number: 5 (lower is better)
Translates to: SDTRRGGSVGSTGLW*HLSERAPQELSSHQ
Trigger: CTGATGACTGGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGCCCCTGCGAGTGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp AGCAGCGACACTCGCAGGGGCGGTAGTGTGGGCAGTACTGGTCTGTaGTGGCATTTGAGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCAT +
Preference number: 5 (lower is better)
Translates to: SSDTRRGGSVGSTGL*WHLSERAPQELSSH
Trigger: ATGACTGGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGCCCCTGCGAGTGTCGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp GCCGCTGCTGTGGCGGAGTCGAACTGGAAAGGGTTAAGCAGGAGCTaGGTCTCGGCAGGATTTTCCAGCTTCATCCCTGTCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: AAAVAESNWKGLSRS*VSAGFSSFIPVRPM
Trigger: CATCGGCCTGACAGGGATGAAGCTGGAAAATCCTGCCGAGACTCAGCTCCTGCTTAACCCTTTCCAGTTCGACTCCGCCACAGCAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp CTCGCAGGGGCGGTAGTGTGGGCAGTACTGGTCTGTGGTGGCATTTaGGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCATCAGTGGATTG +
Preference number: 5 (lower is better)
Translates to: LAGAVVWAVLVCGGI*VRELPRSCPVISGL
Trigger: CAATCCACTGATGACTGGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGCCCCTGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TGGGGTTGCTTGGGCGGCTGTGTTGGAGGCTGGGGTATGGACGCCTaGTGTGGCTCTGAAGAAGTCAGTACTGATGAGGGAGCTGACTTG +
Preference number: 5 (lower is better)
Translates to: WGCLGGCVGGWGMDA*CGSEEVSTDEGADL
Trigger: CAAGTCAGCTCCCTCATCAGTACTGACTTCTTCAGAGCCACAGCAGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TGGACACTCAATGCCATTGCCTGGGGAGCCATCTCCTCCAGGACCTaGTGTACCAGGTGTGCTCGGGGTGAAGCCATGCTGGTGTGTTGT +
Preference number: 5 (lower is better)
Translates to: WTLNAIAWGAISSRT*CTRCARGEAMLVCC
Trigger: ACAACACACCAGCATGGCTTCACCCCGAGCACACCTGGTACACCAGGTCCTGGAGGAGATGGCTCCCCAGGCAATGGCATTGAGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TGGAGGAGGAGGAGGAGGAGGTGGAGGCGGTGGAGGAGTGGGTGGTaGAGCTTGCAGAGGAGCAGATACTGTGTTTGGGATTTTCACAGG +
Preference number: 5 (lower is better)
Translates to: WRRRRRRWRRWRSGW*SLQRSRYCVWDFHR
Trigger: CCTGTGAAAATCCCAAACACAGTATCTGCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTCCACCTCCTCCTCCTCCTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TGGTGGAGGAGGAGGAGGAGGAGGTGGAGGCGGTGGAGGAGTGGGTaGTGGAGCTTGCAGAGGAGCAGATACTGTGTTTGGGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: WWRRRRRRWRRWRSG*WSLQRSRYCVWDFH
Trigger: GTGAAAATCCCAAACACAGTATCTGCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTCCACCTCCTCCTCCTCCTCCTCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GAAGGGATTGGAGTTTGTGACGCTGAGGGAGGTCTTCCAATCAGTTaGGGTTGCTTGGGCGGCTGTGTTGGAGGCTGGGGTATGGACGCC +
Preference number: 5 (lower is better)
Translates to: EGIGVCDAEGGLPIS*GCLGGCVGGWGMDA
Trigger: GGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCTCCCTCAGCGTCACAAACTCCAATCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp ATTGGAGTTTGTGACGCTGAGGGAGGTCTTCCAATCAGTTGGGGTTaGTTGGGCGGCTGTGTTGGAGGCTGGGGTATGGACGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: IGVCDAEGGLPISWG*LGGCVGGWGMDACC
Trigger: ACAGCAGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCTCCCTCAGCGTCACAAACTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp GCAGTACTTTTCTCTTCCTTGGTTTCCGAAGCCTCGTTGGAGCTCTaGGGCTGGTCGCCCTCGCCTTTGGCTGTCTTGGCAGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: AVLFSSLVSEASLEL*GWSPSPLAVLAGTG
Trigger: ACCAGTTCCTGCCAAGACAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TTTCCGAAGCCTCGTTGGAGCTCTGCGGCTGGTCGCCCTCGCCTTTaGCTGTCTTGGCAGGAACTGGTTTCTGCTGCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: FPKPRWSSAAGRPRL*LSWQELVSAAVLAV
Trigger: AACAGCAAGAACAGCAGCAGAAACCAGTTCCTGCCAAGACAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TTTCGGGAGCAGTACTTTTCTCTTCCTTGGTTTCCGAAGCCTCGTTaGAGCTCTGCGGCTGGTCGCCCTCGCCTTTGGCTGTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: FREQYFSLPWFPKPR*SSAAGRPRLWLSWQ
Trigger: CTGCCAAGACAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTACTGCTCCCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TCTCCTCCAGGACCTGGTGTACCAGGTGTGCTCGGGGTGAAGCCATaGTGGTGTGTTGTTGAACTGTCCTCGTCTCCATGGGTCGTTTCA +
Preference number: 5 (lower is better)
Translates to: SPPGPGVPGVLGVKP*WCVVELSSSPWVVS
Trigger: TGAAACGACCCATGGAGACGAGGACAGTTCAACAACACACCAGCATGGCTTCACCCCGAGCACACCTGGTACACCAGGTCCTGGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp CCAGTGTCTGAGGTACTGCAGGACCATAGGGAAAGAGACTCTCCATaGCACAGATTGGTGGCAGGTAGCCTCCCTGCACTGTTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PVSEVLQDHRERDSP*HRLVAGSLPALFQG
Trigger: TCCCTGGAACAGTGCAGGGAGGCTACCTGCCACCAATCTGTGGCATGGAGAGTCTCTTTCCCTATGGTCCTGCAGTACCTCAGACACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp GGCAAGCCGGATTTCAGGCGGCAGCTCATTATTTACAAGTCCTGGTaGCAGAGCCGCTGCTGTGGCGGAGTCGAACTGGAAAGGGTTAAG +
Preference number: 5 (lower is better)
Translates to: GKPDFRRQLIIYKSW*QSRCCGGVELERVK
Trigger: CTTAACCCTTTCCAGTTCGACTCCGCCACAGCAGCGGCTCTGGCACCAGGACTTGTAAATAATGAGCTGCCGCCTGAAATCCGGCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CCA 90 bp TTGCTTCAGATCTTCAAGCAAGGAACCAGCCATGCCAGTCATACCTaGCACCCCAAATGTGGTGGAGGTGGGCAAGCCCAGATCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LLQIFKQGTSHASHT*HPKCGGGGQAQIWP
Trigger: GGGCCAGATCTGGGCTTGCCCACCTCCACCACATTTGGGGTGCCAGGTATGACTGGCATGGCTGGTTCCTTGCTTGAAGATCTGAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp TGGTGTACCAGGTGTGCTCGGGGTGAAGCCATGCTGGTGTGTTGTTaGACTGTCCTCGTCTCCATGGGTCGTTTCACTAGGAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: WCTRCARGEAMLVCC*TVLVSMGRFTRSCC
Trigger: ACAGCAGCTCCTAGTGAAACGACCCATGGAGACGAGGACAGTTCAACAACACACCAGCATGGCTTCACCCCGAGCACACCTGGTACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp TTGCTTTTTCTCCGATTCTTTGTTCTGTGGCTCGGTCTGCTGTCCTaGCAGAGAGGATGGAGGAGGAGGAGGTGGTGGTGGAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LLFLRFFVLWLGLLS*QRGWRRRRWWWRWW
Trigger: CCACCACCTCCACCACCACCTCCTCCTCCTCCATCCTCTCTGTCAGGACAGCAGACCGAGCCACAGAACAAAGAATCGGAGAAAAAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TTCAGGCGGCAGCTCATTATTTACAAGTCCTGGTGCCAGAGCCGCTaGTGTGGCGGAGTCGAACTGGAAAGGGTTAAGCAGGAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: FRRQLIIYKSWCQSR*CGGVELERVKQELS
Trigger: ACTCAGCTCCTGCTTAACCCTTTCCAGTTCGACTCCGCCACAGCAGCGGCTCTGGCACCAGGACTTGTAAATAATGAGCTGCCGCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CCA 90 bp TGGGTCAGATGCAGCTGCAGGTGCATCTTGTTGCTGAGAACATCCTaGCAGAGTGGACAGCAGATGACTGGCTGTACAGAGTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: WVRCSCRCILLLRTS*QSGQQMTGCTECCD
Trigger: GTCACAGCACTCTGTACAGCCAGTCATCTGCTGTCCACTCTGCCAGGATGTTCTCAGCAACAAGATGCACCTGCAGCTGCATCTGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTATCAGTTGGGGTTGCTaGGGCGGCTGTGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPISWGC*GGCVGG
Trigger: GCCTCCAACACAGCCGCCCAAGCAACCCCAACTGAT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp ATTTGTTGCAAACAGCACACTGGAATAGCTTCAGCGCCGGGTCACTaGTATAAGGTGACAGCTCTCCAAGTCCTGGTGCCAGAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ICCKQHTGIASAPGH*YKVTALQVLVPEPL
Trigger: CAGCGGCTCTGGCACCAGGACTTGGAGAGCTGTCACCTTATATCAGTGACCCGGCGCTGAAGCTATTCCAGTGTGCTGTTTGCAACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp GCTCGCTGTTCACATGCACACTTAGAGCCTCCAGGCTGTCAGAGGTaGATTTGTTGCAAACAGCACACTGGAATAGCTTCAGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: ARCSHAHLEPPGCQR*ICCKQHTGIASAPG
Trigger: ACCCGGCGCTGAAGCTATTCCAGTGTGCTGTTTGCAACAAATTCACCTCTGACAGCCTGGAGGCTCTAAGTGTGCATGTGAACAGCGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp TCTAACATCCCTTGGCCAGGGCTATTCACAGCAGCTGTGATGCTATaGCCACTGGGTAGGTGTCTACTTGGTTCCAGCTTTGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SNIPWPGLFTAAVML*PLGRCLLGSSFAAL
Trigger: CAGGGCTGCAAAGCTGGAACCAAGTAGACACCTACCCAGTGGTCATAGCATCACAGCTGCTGTGAATAGCCCTGGCCAAGGGATGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp CAGTCTGGAGACACACTGTGCAAATGGGTCAGATGCAGCTGCAGGTaGATCTTGTTGCTGAGAACATCCTGGCAGAGTGGACAGCAGATG +
Preference number: 5 (lower is better)
Translates to: QSGDTLCKWVRCSCR*ILLLRTSWQSGQQM
Trigger: CATCTGCTGTCCACTCTGCCAGGATGTTCTCAGCAACAAGATGCACCTGCAGCTGCATCTGACCCATTTGCACAGTGTGTCTCCAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GGGGTGAAGCCATGCTGGTGTGTTGTTGAACTGTCCTCGTCTCCATaGGTCGTTTCACTAGGAGCTGCTGTGGTGCCATCTCTACTGATA +
Preference number: 5 (lower is better)
Translates to: GVKPCWCVVELSSSP*VVSLGAAVVPSLLI
Trigger: TATCAGTAGAGATGGCACCACAGCAGCTCCTAGTGAAACGACCCATGGAGACGAGGACAGTTCAACAACACACCAGCATGGCTTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GAGGGAGGAGAAGAGGGGGACGAAGCAGCTTTCCTGGCGGATGCTTaGAAAAGGATATTAGGCCAGGACTTCATGGAGAAGCAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: EGGEEGDEAAFLADA*KRILGQDFMEKQER
Trigger: TCTCTCTTGCTTCTCCATGAAGTCCTGGCCTAATATCCTTTTCCAAGCATCCGCCAGGAAAGCTGCTTCGTCCCCCTCTTCTCCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTACCCGGGTGGGGAGGTaGAGAACAGTCGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAATRVGR*RTVDSC
Trigger: ACAGCTGTCGACTGTTCTCAACCTCCCCACCCGGGT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGTGGGCTGGAAGGGATaGGAGTTTGTGACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPVGWKG*EFVTLR
Trigger: CCTCAGCGTCACAAACTCCAATCCCTTCCAGCCCAC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCTCCATGCCACAGATaGGTGGCAGGTAGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSPCHR*VAGSLP
Trigger: AGGGAGGCTACCTGCCACCAATCTGTGGCATGGAGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp ATCCTGGCAGAGTGGACAGCAGATGACTGGCTGTACAGAGTGCTGTaGCAGGACATGCATCTGGATCCGACTTTGGTCCCTACTGTTGTA +
Preference number: 5 (lower is better)
Translates to: ILAEWTADDWLYRVL*QDMHLDPTLVPTVV
Trigger: TACAACAGTAGGGACCAAAGTCGGATCCAGATGCATGTCCTGTCACAGCACTCTGTACAGCCAGTCATCTGCTGTCCACTCTGCCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp GATTGGTGGCAGGTAGCCTCCCTGCACTGTTCCAGGGAGCTGAGGTaGAAAGTAGGATGCAAACCCAGGGATAAAGTATGGCAAGAACTG +
Preference number: 5 (lower is better)
Translates to: DWWQVASLHCSRELR*KVGCKPRDKVWQEL
Trigger: CAGTTCTTGCCATACTTTATCCCTGGGTTTGCATCCTACTTTTCACCTCAGCTCCCTGGAACAGTGCAGGGAGGCTACCTGCCACCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp ACAGCTCTCCATTCCTCTTCAGGGAGAGAGCGCTCGCTGTTCACATaGACACTTAGAGCCTCCAGGCTGTCAGAGGTGAATTTGTTGCAA +
Preference number: 5 (lower is better)
Translates to: TALHSSSGRERSLFT*TLRASRLSEVNLLQ
Trigger: TTGCAACAAATTCACCTCTGACAGCCTGGAGGCTCTAAGTGTGCATGTGAACAGCGAGCGCTCTCTCCCTGAAGAGGAATGGAGAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp GGGTCTCCTGCATCTTCACTGGGTTCTTCTGAGGCCGCCTTCAATTaGTGCTCTATAAGTTCGTCCTCACCATTCCTGGCTCCCAAAGAT +
Preference number: 5 (lower is better)
Translates to: GSPASSLGSSEAAFN*CSISSSSPFLAPKD
Trigger: ATCTTTGGGAGCCAGGAATGGTGAGGACGAACTTATAGAGCAGCAATTGAAGGCGGCCTCAGAAGAACCCAGTGAAGATGCAGGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp GCCCAGATCATCTGGGATAGAGCTGCTGTCGCTCTCTACAGGACTTaGCTTCCCTTCATGGTCCACCTCATATTCTCTCTCCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: AQIIWDRAAVALYRT*LPFMVHLIFSLHFL
Trigger: CAGGAAATGGAGAGAGAATATGAGGTGGACCATGAAGGGAAGGCAAGTCCTGTAGAGAGCGACAGCAGCTCTATCCCAGATGATCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TGTATGCAACACTGCAGGTGCTGCACTTGTAGGGCTTATTATCTGTaGTGCTATTGGCTTCCTGGGGGACAGGACTGGAGGCTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: CMQHCRCCTCRAYYL*CYWLPGGQDWRLLA
Trigger: TGCAAGAAGCCTCCAGTCCTGTCCCCCAGGAAGCCAATAGCAGCACAGATAATAAGCCCTACAAGTGCAGCACCTGCAGTGTTGCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TGTGGTGGAGGTGGGCAAGCCCAGATCTGGCCCCAAGCTAAACTCTaGCCCAGGTATATAGAATGGAAAGAGAAACTGGGGTTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: CGGGGQAQIWPQAKL*PRYIEWKEKLGLLK
Trigger: TTTCAGCAACCCCAGTTTCTCTTTCCATTCTATATACCTGGGGCAGAGTTTAGCTTGGGGCCAGATCTGGGCTTGCCCACCTCCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp GTGTTTGAATCTGTTGCTTCAGATCTTCAAGCAAGGAACCAGCCATaGCAGTCATACCTGGCACCCCAAATGTGGTGGAGGTGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: VFESVASDLQARNQP*QSYLAPQMWWRWAS
Trigger: GCTTGCCCACCTCCACCACATTTGGGGTGCCAGGTATGACTGGCATGGCTGGTTCCTTGCTTGAAGATCTGAAGCAACAGATTCAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp GGCAGTCTGTACTTGCCAGGCTACCTTGCTCTTGTTTCAACAGTTTaGTTGGTTGCTGTTGAGGTTGCTGCTGTTGTGGTAGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GSLYLPGYLALVSTV*LVAVEVAAVVVGEA
Trigger: AGCCTCCCCTACCACAACAGCAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp CAAAGCTGGTTTCACCTCCCCAGAACCTCCCGTGTTTTCCATATCTaGTGCTCCCTCATCTCCTGTGGTTGCATCACTGATGGCCGTATT +
Preference number: 5 (lower is better)
Translates to: QSWFHLPRTSRVFHI*CSLISCGCITDGRI
Trigger: AATACGGCCATCAGTGATGCAACCACAGGAGATGAGGGAGCAGCAGATATGGAAAACACGGGAGGTTCTGGGGAGGTGAAACCAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TGGCAAGAACTGCCCTCCTATAAAGGATGCTGGGTCCCCAGCAATTaGATTCTGCAAGGCCTGCAGCTGAGTAGGATCCATGTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: WQELPSYKGCWVPSN*ILQGLQLSRIHVCF
Trigger: GAAACACACATGGATCCTACTCAGCTGCAGGCCTTGCAGAATGCAATTGCTGGGGACCCAGCATCCTTTATAGGAGGGCAGTTCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TGTTGTCTCTCTTGTGTGCCTCTTTCTCATCATCCTCAGCCACTGTaGGAGGCTTCAGAGGGTCTCCTGCATCTTCACTGGGTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: CCLSCVPLSHHPQPL*EASEGLLHLHWVLL
Trigger: CAGAAGAACCCAGTGAAGATGCAGGAGACCCTCTGAAGCCTCCCACAGTGGCTGAGGATGATGAGAAAGAGGCACACAAGAGAGACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp ATCCTGGGTCATTGTCTCACTCTCTGCCCAGAGCTCACCATTCATTaGCAAGGAGGCATAGAGCTGCTGCAGTTCAGCTTCACTCAGTTC +
Preference number: 5 (lower is better)
Translates to: ILGHCLTLCPELTIH*QGGIELLQFSFTQF
Trigger: GAACTGAGTGAAGCTGAACTGCAGCAGCTCTATGCCTCCTTGCCAATGAATGGTGAGCTCTGGGCAGAGAGTGAGACAATGACCCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp CCCACTGAGAGCCAGGTCACAGGCAAGACACTGATATTTGCTGACTaGGATGCGAAGCACTGTTTCTTGAGGGTCAATCAATGGCTGACC +
Preference number: 5 (lower is better)
Translates to: PTESQVTGKTLIFAD*DAKHCFLRVNQWLT
Trigger: GGTCAGCCATTGATTGACCCTCAAGAAACAGTGCTTCGCATCCCAGTCAGCAAATATCAGTGTCTTGCCTGTGACCTGGCTCTCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGCTTGGGCGGCTGTGTaGGAGGCTGGGGTATGGACG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRAWAAV*EAGVWT
Trigger: CGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGGTCTGTGGTGGCATTaGAGTGAGAGAGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCGLWWH*SERAPQ
Trigger: CTGGGGAGCTCTCTCACTCAAATGCCACCACAGACC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCTCCATGCCACAGATaGGTGGCAGGTAGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSPCHR*VAGSLP
Trigger: AGGGAGGCTACCTGCCACCAATCTGTGGCATGGAGA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGTTTCCGAAGCCTCGTaGGAGCTCTGCGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVVSEAS*ELCGWS
Trigger: CGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAAC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp TCATGGACTCTAACATCCCTTGGCCAGGGCTATTCACAGCAGCTGTaGTGCTATGACCACTGGGTAGGTGTCTACTTGGTTCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SWTLTSLGQGYSQQL*CYDHWVGVYLVPAL
Trigger: CAAAGCTGGAACCAAGTAGACACCTACCCAGTGGTCATAGCATCACAGCTGCTGTGAATAGCCCTGGCCAAGGGATGTTAGAGTCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp AAACCCAGGGATAAAGTATGGCAAGAACTGCCCTCCTATAAAGGATaGTGGGTCCCCAGCAATTGCATTCTGCAAGGCCTGCAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: KPRDKVWQELPSYKG*WVPSNCILQGLQLS
Trigger: ACTCAGCTGCAGGCCTTGCAGAATGCAATTGCTGGGGACCCAGCATCCTTTATAGGAGGGCAGTTCTTGCCATACTTTATCCCTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TGGCATTTGAGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCATCAGTaGATTGTTGGGGTCAAATATCATGTAGGGCATGTCCATGGGTCT +
Preference number: 5 (lower is better)
Translates to: WHLSERAPQELSSHQ*IVGVKYHVGHVHGS
Trigger: AGACCCATGGACATGCCCTACATGATATTTGACCCCAACAATCCACTGATGACTGGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGACCACCAAGAGACCTaGAAGACCCCAAAACCGTGT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPDHQET*KTPKPC
Trigger: ACACGGTTTTGGGGTCTTCAAGGTCTCTTGGTGGTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGCCCTGACATGCTTTaGTCATCCACTGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSPDML*SSTGLS
Trigger: TGACAGCCCAGTGGATGACAAAAGCATGTCAGGGCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCCTCCACAGGCTCCTTaGCTGGCTTCTGTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCPPQAP*LASVPH
Trigger: ATGAGGAACAGAAGCCAGCAAAGGAGCCTGTGGAGG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGTTTCCGAAGCCTCGTaGGAGCTCTGCGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRVSEAS*ELCGWS
Trigger: CGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAAC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS GCA 90 bp TGCAAGCTGATACCATGCAGCGAGCAGTTATCGGTGATGCCTTGCTaGTGTACTGTTAGGCCCAGCACATCAGAAGCTTTCTTTATACGG +
Preference number: 5 (lower is better)
Translates to: CKLIPCSEQLSVMPC*CTVRPSTSEAFFIR
Trigger: CCGTATAAAGAAAGCTTCTGATGTGCTGGGCCTAACAGTACAGCAGCAAGGCATCACCGATAACTGCTCGCTGCATGGTATCAGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TCACTCAGTTCAGGATGGCCTGCTTCCAAGTGTTTCTTTAAAGCCTaGAATGTACGGAAACTCCGCTGGCAGAGGGTACACATTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SLSSGWPASKCFFKA*NVRKLRWQRVHIVA
Trigger: GGCTACAATGTGTACCCTCTGCCAGCGGAGTTTCCGTACATTCCAGGCTTTAAAGAAACACTTGGAAGCAGGCCATCCTGAACTGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GCATGTGTTGGTGTTCCTTCCAAAGTTCCAGGGTTGGGAAGGCTATaGTACACTGATCACATGGGTACTGGAGTAACTGTGGAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: ACVGVPSKVPGLGRL*YTDHMGTGVTVEVD
Trigger: GTCTACCTCCACAGTTACTCCAGTACCCATGTGATCAGTGTACCATAGCCTTCCCAACCCTGGAACTTTGGAAGGAACACCAACACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GATGGACAAGCGGGCAGAGTACTTCACCCCACAGAGGGTACACTCTaGCTTAGTACCATCTGTTCCACTTTGATTGATCATGAACGGCTT +
Preference number: 5 (lower is better)
Translates to: DGQAGRVLHPTEGTL*LSTICSTLIDHERL
Trigger: AAGCCGTTCATGATCAATCAAAGTGGAACAGATGGTACTAAGCCAGAGTGTACCCTCTGTGGGGTGAAGTACTCTGCCCGCTTGTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCTAATGCTGAGGTATTaGGGAAAGCCGGATCGGCTG +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALMLRY*GKPDRL
Trigger: CAGCCGATCCGGCTTTCCCAAATACCTCAGCATTAG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTCAGTGGGTTCACTTTaGACAGGGCACCCCACATTC +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAASVGSL*TGHPTF
Trigger: GAATGTGGGGTGCCCTGTCAAAAGTGAACCCACTGA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTAGCCATGCTGGTGTGTaGTTGAACTGTCCTCGTCTC +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAASHAGV*LNCPRL
Trigger: GAGACGAGGACAGTTCAACAACACACCAGCATGGCT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTTGGTTCCTGTGTaGTCTTCTTTGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLLVPV*SSLASR
Trigger: CCTGCTGGCCAAAGAAGACAACACAGGAACCAAAAG...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGCAGGTGCATCTTGTaGCTGAGAACATCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCCRCIL*LRTSWQ
Trigger: CTGCCAGGATGTTCTCAGCAACAAGATGCACCTGCA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAGCCCTGACATGCTTTaGTCATCCACTGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSPDML*SSTGLS
Trigger: TGACAGCCCAGTGGATGACAAAAGCATGTCAGGGCT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGGAGAGTGGAGGAATaGGTTTTGAGCAGCGAGGAA +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPWRVEE*VLSSEE
Trigger: TTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGCGTTTATCACGGTGTaGATCTTCACCGCTATTCCC +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPAFITV*IFTAIP
Trigger: GGGAATAGCGGTGAAGATCAACACCGTGATAAACGC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp TTCAAGAAGGCAAAGCCAGCCTGCAAAGAGTCACCGTTTTCAACATaGAAAGCGCTCCATAAACCGCGGAAGGTTGGATCAGGTCCTATG +
Preference number: 5 (lower is better)
Translates to: FKKAKPACKESPFST*KALHKPRKVGSGPM
Trigger: CATAGGACCTGATCCAACCTTCCGCGGTTTATGGAGCGCTTTTCATGTTGAAAACGGTGACTCTTTGCAGGCTGGCTTTGCCTTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp AGTTGCTCAGGCGTGATGGTGGTTCTCAAGCGTTTATCACGGTGTTaGTCTTCACCGCTATTCCCGCCCTCCTTCTCACTGCAATTATTA +
Preference number: 5 (lower is better)
Translates to: SCSGVMVVLKRLSRC*SSPLFPPSFSLQLL
Trigger: TAATAATTGCAGTGAGAAGGAGGGCGGGAATAGCGGTGAAGATCAACACCGTGATAAACGCTTGAGAACCACCATCACGCCTGAGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp GCTTGCAAGCTGATACCATGCAGCGAGCAGTTATCGGTGATGCCTTaGTGCTGTACTGTTAGGCCCAGCACATCAGAAGCTTTCTTTATA +
Preference number: 5 (lower is better)
Translates to: ACKLIPCSEQLSVMP*CCTVRPSTSEAFFI
Trigger: TATAAAGAAAGCTTCTGATGTGCTGGGCCTAACAGTACAGCAGCAAGGCATCACCGATAACTGCTCGCTGCATGGTATCAGCTTGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp AGGTGGAGGTGGAGGCGGTGGTGTTTCTGGGGAAGAAGGAGAAATTaGATAAAGCTTGTCATAGGCCTCCCTGTATTGACGAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: RWRWRRWCFWGRRRN*IKLVIGLPVLTSKF
Trigger: AAATTTGCTCGTCAATACAGGGAGGCCTATGACAAGCTTTATCCAATTTCTCCTTCTTCCCCAGAAACACCACCGCCTCCACCTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GAGGTAGACTGTTCTGAAGAGAAGTCATGGAAATTTGCAGTGGGCTaGAAGGGATTGGAGTTTGTGACGCTGAGGGAGGTCTTCCAATCA +
Preference number: 5 (lower is better)
Translates to: EVDCSEEKSWKFAVG*KGLEFVTLREVFQS
Trigger: TGATTGGAAGACCTCCCTCAGCGTCACAAACTCCAATCCCTTCCAGCCCACTGCAAATTTCCATGACTTCTCTTCAGAACAGTCTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GGTACTGGAGTAACTGTGGAGGTAGACTGTTCTGAAGAGAAGTCATaGAAATTTGCAGTGGGCTGGAAGGGATTGGAGTTTGTGACGCTG +
Preference number: 5 (lower is better)
Translates to: GTGVTVEVDCSEEKS*KFAVGWKGLEFVTL
Trigger: CAGCGTCACAAACTCCAATCCCTTCCAGCCCACTGCAAATTTCCATGACTTCTCTTCAGAACAGTCTACCTCCACAGTTACTCCAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GGGGTCAAATATCATGTAGGGCATGTCCATGGGTCTTTCCAAGAATaGAGAGTGGAGGAATTGGTTTTGAGCAGCGAGGAAGTGCATGTG +
Preference number: 5 (lower is better)
Translates to: GVKYHVGHVHGSFQE*RVEELVLSSEEVHV
Trigger: CACATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGACATGCCCTACATGATATTTGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGAAGTGGCACATTCGTaGCAGGGTATTTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPEVAHS*QGISFA
Trigger: AGCAAAGGAAATACCCTGCAACGAATGTGCCACTTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCAGGTGGGTTTCTGTTaGGGTTTGGATGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVQVGFC*GLDGEG
Trigger: ACCCTCCCCATCCAAACCCAAACAGAAACCCACCTG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTAATATCTCACTGAGGTaGTCCTCCTCTGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAANISLR*SSSDGR
Trigger: CCTGCCATCAGAGGAGGACAACCTCAGTGAGATATT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCCTGTGTTGTCTTCTTaGGCCAGCAGGAGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVPVLSS*ASRSGC
Trigger: ACAGCCACTCCTGCTGGCCAAAGAAGACAACACAGG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCCTCCACAGGCTCCTTaGCTGGCTTCTGTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVPPQAP*LASVPH
Trigger: ATGAGGAACAGAAGCCAGCAAAGGAGCCTGTGGAGG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGGAGGCTGTTGATTTaGAGGCTGCAGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGRLLI*RLQLGL
Trigger: CAGCCCCAGCTGCAGCCTCAAAATCAACAGCCTCCC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTTGCTTGGTTGCTGTaGAGGTTGCTGCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAFAWLL*RLLLLW
Trigger: CCACAACAGCAGCAACCTCAACAGCAACCAAGCAAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTGCTTGGTTGCTGTaGAGGTTGCTGCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCFAWLL*RLLLLW
Trigger: CCACAACAGCAGCAACCTCAACAGCAACCAAGCAAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGAGCAGATACTGTGTTaGGGATTTTCACAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCEQILC*GFSQAP
Trigger: TGGGGCCTGTGAAAATCCCAAACACAGTATCTGCTC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTACCCGGGTGGGGAGGTaGAGAACAGTCGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQITRVGR*RTVDSC
Trigger: ACAGCTGTCGACTGTTCTCAACCTCCCCACCCGGGT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGTGGGCTGGAAGGGATaGGAGTTTGTGACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRVGWKG*EFVTLR
Trigger: CCTCAGCGTCACAAACTCCAATCCCTTCCAGCCCAC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGAAGTCATGGAAATTaGCAGTGGGCTGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRSHGN*QWAGRD
Trigger: ATCCCTTCCAGCCCACTGCAAATTTCCATGACTTCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGAGGAAGTGCATGTGTaGGTGTTCCTTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPEEVHV*VFLPKF
Trigger: GAACTTTGGAAGGAACACCAACACATGCACTTCCTC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGGAGAGTGGAGGAATaGGTTTTGAGCAGCGAGGAA +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCWRVEE*VLSSEE
Trigger: TTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTGGCCGATCATTGCTTTaGGACTTAAAGGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPGRSLL*DLKGLL
Trigger: TAGCAACCCCTTTAAGTCCAAAAGCAATGATCGGCC...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTCGCCTTTGGCTGTCTaGGCAGGAACTGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVSPLAV*AGTGFC
Trigger: GCAGAAACCAGTTCCTGCCAAGACAGCCAAAGGCGA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp ATGTCCATGGGTCTTTCCAAGAATGGAGAGTGGAGGAATTGGTTTTaGGCAGCGAGGAAGTGCATGTGTTGGTGTTCCTTCCAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: MSMGLSKNGEWRNWF*AARKCMCWCSFQSS
Trigger: GGAACTTTGGAAGGAACACCAACACATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TTCACTAGGAGCTGCTGTGGTGCCATCTCTACTGATACTTCCGTCTaGAAAGTCCTTGCCACCAATGCTATAGCTATTAGTAACGTTGCC +
Preference number: 5 (lower is better)
Translates to: FTRSCCGAISTDTSV*KVLATNAIAISNVA
Trigger: GGCAACGTTACTAATAGCTATAGCATTGGTGGCAAGGACTTTGCAGACGGAAGTATCAGTAGAGATGGCACCACAGCAGCTCCTAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp CATTCTTTATTTCCACACCCACCTTGGAGTCCTCAAGCCCTGACATaGTTTTGTCATCCACTGGGCTGTCACCTGAATATTTCCCAGAAC +
Preference number: 5 (lower is better)
Translates to: HSLFPHPPWSPQALT*FCHPLGCHLNISQN
Trigger: GTTCTGGGAAATATTCAGGTGACAGCCCAGTGGATGACAAAAGCATGTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAATAAAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp ACGGAAACTCCGCTGGCAGAGGGTACACATTGTAGCCGCCCGGATTaGATGATACTGGGAATGTATCTGAAGCTTCTGCATAGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: TETPLAEGTHCSRPD*MILGMYLKLLHSFK
Trigger: TTTAAAACTATGCAGAAGCTTCAGATACATTCCCAGTATCATGCAATCCGGGCGGCTACAATGTGTACCCTCTGCCAGCGGAGTTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp CTCCTTGTAAGATGGCATGTCCTTCATGAGTTGGCAGTCTGTACTTaGCAGGCTACCTTGCTCTTGTTTCAACAGTTTGCTTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLVRWHVLHELAVCT*QATLLLFQQFAWLL
Trigger: CAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTCATGAAGGACATGCCATCTTACAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TCACTCTCGTCATCCTTCAGGACAGGAAGGCGGGCATTAGGGCAGTaGTGTTCCATATATTTCTGTAAACTGGGAAAAGAAGTGGCACAT +
Preference number: 5 (lower is better)
Translates to: SLSSSFRTGRRALGQ*CSIYFCKLGKEVAH
Trigger: ATGTGCCACTTCTTTTCCCAGTTTACAGAAATATATGGAACACCACTGCCCTAATGCCCGCCTTCCTGTCCTGAAGGATGACGAGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCATCCGTTTTCAGGTaGTCATGTGAGGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSSVFR*SCEELF
Trigger: AAACAGCTCCTCACATGACAACCTGAAAACGGATGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCGAAGTGGCACATTCGTaGCAGGGTATTTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCEVAHS*QGISFA
Trigger: AGCAAAGGAAATACCCTGCAACGAATGTGCCACTTC...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAAAAGAGTTTGCTGTTaGCCCCAGTCTGTGCATTCT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPKRVCC*PQSVHS
Trigger: AGAATGCACAGACTGGGGCAAACAGCAAACTCTTTT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGGACACTCAATGCCATaGCCTGGGGAGCCATCTCCT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHGHSMP*PGEPSP
Trigger: AGGAGATGGCTCCCCAGGCAATGGCATTGAGTGTCC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGACACTCAATGCCATaGCCTGGGGAGCCATCTCCT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGHSMP*PGEPSP
Trigger: AGGAGATGGCTCCCCAGGCAATGGCATTGAGTGTCC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAAACCGTGTCACATTTaGGACACTCAATGCCATTGC +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPKPCHI*DTQCHC
Trigger: GCAATGGCATTGAGTGTCCAAAATGTGACACGGTTT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTATTTTGCCTTCACTGTaGTCTCTCTTGTGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPILPSL*SLLCAS
Trigger: AGAGGCACACAAGAGAGACAACAGTGAAGGCAAAAT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGGGTAGGTGTCTACTaGGTTCCAGCTTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRWVGVY*VPALQP
Trigger: GGGCTGCAAAGCTGGAACCAAGTAGACACCTACCCA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGGGGTCACTCTGCTTaGTCTTTTCTCCAGGATATT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRGHSA*SFLQDI
Trigger: AATATCCTGGAGAAAAGACAAAGCAGAGTGACCCCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGTCTGTGGTGGCATTaGAGTGAGAGAGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGLWWH*SERAPQ
Trigger: CTGGGGAGCTCTCTCACTCAAATGCCACCACAGACC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGGATATTAAAGGGCTaGGTGGCAAGCTATAACCTG +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPWILKG*VASYNL
Trigger: CAGGTTATAGCTTGCCACCAAGCCCTTTAATATCCA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTGGCCGATCATTGCTTTaGGACTTAAAGGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAGRSLL*DLKGLL
Trigger: TAGCAACCCCTTTAAGTCCAAAAGCAATGATCGGCC...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTTTCTCCGATTCTTaGTTCTGTGGCTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCFFSDS*FCGSVC
Trigger: GCAGACCGAGCCACAGAACAAAGAATCGGAGAAAAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTGGGTCCCCAGCAATaGCATTCTGCAAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLGPQQ*HSARPA
Trigger: TGCAGGCCTTGCAGAATGCAATTGCTGGGGACCCAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTCGCCTTTGGCTGTCTaGGCAGGAACTGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQSPLAV*AGTGFC
Trigger: GCAGAAACCAGTTCCTGCCAAGACAGCCAAAGGCGA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp GCTGTATCTGTTTGTCCAGACACCATGCAATGCTTGTACAACACTTaGTCAGTGGCATCCATGGAGTCTTCCGTTTGGCTTTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: AVSVCPDTMQCLYNT*SVASMESSVWLSSW
Trigger: CCAAGATGAAAGCCAAACGGAAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTGGACAAACAGATACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp CTAGGGTTGCAGTGCTTTTGGCTGTATCTGTTTGTCCAGACACCATaGAATGCTTGTACAACACTTGATCAGTGGCATCCATGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: LGLQCFWLYLFVQTP*NACTTLDQWHPWSL
Trigger: AAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTGGACAAACAGATACAGCCAAAAGCACTGCAACCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp CTGTTTGTCCAGACACCATGCAATGCTTGTACAACACTTGATCAGTaGCATCCATGGAGTCTTCCGTTTGGCTTTCATCTTGGGCATCAT +
Preference number: 5 (lower is better)
Translates to: LFVQTPCNACTTLDQ*HPWSLPFGFHLGHH
Trigger: ATGATGCCCAAGATGAAAGCCAAACGGAAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTGGACAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGAGGTTCTTTGTCTTaGCCAATCCCCTGTATTATG +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRGSLS*PIPCIM
Trigger: CATAATACAGGGGATTGGCAAAGACAAAGAACCTCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCAAGCCTGGGATGAGGTaGTCCAGTCTTACAATAAAC +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCKPGMR*SSLTIN
Trigger: GTTTATTGTAAGACTGGACAACCTCATCCCAGGCTT...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCAGGTGGGTTTCTGTTaGGGTTTGGATGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHQVGFC*GLDGEG
Trigger: ACCCTCCCCATCCAAACCCAAACAGAAACCCACCTG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATTCAGCCTCCACTCATaGCTTTTGCCCCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRFSLHS*LLPPSL
Trigger: CAAGGAAGGGGGCAAAAGCAATGAGTGGAGGCTGAA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAATATCTCACTGAGGTaGTCCTCCTCTGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVNISLR*SSSDGR
Trigger: CCTGCCATCAGAGGAGGACAACCTCAGTGAGATATT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTATTTTGCCTTCACTGTaGTCTCTCTTGTGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAILPSL*SLLCAS
Trigger: AGAGGCACACAAGAGAGACAACAGTGAAGGCAAAAT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTATTTCCACACCCACCTaGGAGTCCTCAAGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIISTPT*ESSSPD
Trigger: GTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAAT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCGCTCTCTACAGGACTaGCCTTCCCTTCATGGTCCA +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIRSLQD*PSLHGP
Trigger: TGGACCATGAAGGGAAGGCAAGTCCTGTAGAGAGCG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCGCTCTCTACAGGACTaGCCTTCCCTTCATGGTCCA +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHRSLQD*PSLHGP
Trigger: TGGACCATGAAGGGAAGGCAAGTCCTGTAGAGAGCG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAGGACTGGAGGCTTCTaGCAAAACCTTTTTCAACTT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPRTGGF*QNLFQL
Trigger: AAGTTGAAAAAGGTTTTGCAAGAAGCCTCCAGTCCT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTGGGTAGGTGTCTACTaGGTTCCAGCTTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHWVGVY*VPALQP
Trigger: GGGCTGCAAAGCTGGAACCAAGTAGACACCTACCCA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTGGGTATCTTTGCTGTaGACTGAAGCTAAGCTCATG +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAWVSLL*TEAKLM
Trigger: CATGAGCTTAGCTTCAGTCAACAGCAAAGATACCCA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTAAATTGGAGCTGAGTTaGGCCAACATGATGTTGTGT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPKLELS*ANMMLC
Trigger: ACACAACATCATGTTGGCCAAACTCAGCTCCAATTT...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCCATATGGGAAAAATaGCCCATGCACATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSIWEK*PMHMFL
Trigger: CAAGAACATGTGCATGGGCAATTTTTCCCATATGGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTGGCTGTATCTGTTaGTCCAGACACCATGCAATG +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCFGCIC*SRHHAM
Trigger: CATTGCATGGTGTCTGGACAAACAGATACAGCCAAA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAGGTCTTCCAATCAGTaGGGGTTGCTTGGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHRSSNQ*GLLGRL
Trigger: CAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCCCAGTCATCAGTGGATaGTTGGGGTCAAATATCATG +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCPVISG*LGSNIM
Trigger: CATGATATTTGACCCCAACAATCCACTGATGACTGG...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGTCTGCAGCAAAGATTaGGTGGGGCCACTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNVCSKD*VGPLLR
Trigger: TCTCAGCAGTGGCCCCACCAAATCTTTGCTGCAGAC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp TCTGCTGATGCTTCACCGACCGAACATGTTGGACTAGGTTTAACTTaGTCTTGGAGGAGTAATCACACACCGCACAGTAGTAATAACAGG +
Preference number: 5 (lower is better)
Translates to: SADASPTEHVGLGLT*SWRSNHTPHSSNNR
Trigger: CCTGTTATTACTACTGTGCGGTGTGTGATTACTCCTCCAAGATCAAGTTAAACCTAGTCCAACATGTTCGGTCGGTGAAGCATCAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp AATCCAGCAAGTACTTTTCATAGAGTATTTCGAGTTGCTCAGGCGTaGTGGTGGTTCTCAAGCGTTTATCACGGTGTTGATCTTCACCGC +
Preference number: 5 (lower is better)
Translates to: NPASTFHRVFRVAQA*WWFSSVYHGVDLHR
Trigger: GCGGTGAAGATCAACACCGTGATAAACGCTTGAGAACCACCATCACGCCTGAGCAACTCGAAATACTCTATGAAAAGTACTTGCTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TCAGTTGATCTTGTAGAGCATCTGAGATGTTCACATCCTTACTGCTaGTTTTATTCCATTCTGATGCCTCCACAGGCTCCTTTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SVDLVEHLRCSHPYC*FYSILMPPQAPLLA
Trigger: AGCCAGCAAAGGAGCCTGTGGAGGCATCAGAATGGAATAAAACCAGCAGTAAGGATGTGAACATCTCAGATGCTCTACAAGATCAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp CAGACACCATGCAATGCTTGTACAACACTTGATCAGTGGCATCCATaGAGTCTTCCGTTTGGCTTTCATCTTGGGCATCATCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: QTPCNACTTLDQWHP*SLPFGFHLGHHHLH
Trigger: ATGAAGATGATGATGCCCAAGATGAAAGCCAAACGGAAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TCATCAGTGGATTGTTGGGGTCAAATATCATGTAGGGCATGTCCATaGGTCTTTCCAAGAATGGAGAGTGGAGGAATTGGTTTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSVDCWGQISCRACP*VFPRMESGGIGFEQ
Trigger: CTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGACATGCCCTACATGATATTTGACCCCAACAATCCACTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp TTTGCTGACTGGGATGCGAAGCACTGTTTCTTGAGGGTCAATCAATaGCTGACCGAAATAACAGAAGGACTTTTGATGGTTTACTGTGGC +
Preference number: 5 (lower is better)
Translates to: FADWDAKHCFLRVNQ*LTEITEGLLMVYCG
Trigger: GCCACAGTAAACCATCAAAAGTCCTTCTGTTATTTCGGTCAGCCATTGATTGACCCTCAAGAAACAGTGCTTCGCATCCCAGTCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTCATTCCACATAGCTTaGATGTGCTCTGCCCATTTT +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAASFHIA*MCSAHF
Trigger: AAAATGGGCAGAGCACATCAAAGCTATGTGGAATGA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGCTGTTGAAAAGAGTTaGCTGTTTGCCCCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVAVEKS*LFAPVC
Trigger: ACAGACTGGGGCAAACAGCAAACTCTTTTCAACAGC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTGCTCTCTGACATCTaGCTAGACTCAGATGATAAG +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAALLSDI*LDSDDK
Trigger: CTTATCATCTGAGTCTAGCAAGATGTCAGAGAGCAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTCAGTGGGTTCACTTTaGACAGGGCACCCCACATTC +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSVGSL*TGHPTF
Trigger: GAATGTGGGGTGCCCTGTCAAAAGTGAACCCACTGA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTCCACTCATTGCTTTaGCCCCCTTCCTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLHSLL*PPSLMW
Trigger: CCACATCAAGGAAGGGGGCAAAAGCAATGAGTGGAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTCAGCCTCCACTCATaGCTTTTGCCCCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIFSLHS*LLPPSL
Trigger: CAAGGAAGGGGGCAAAAGCAATGAGTGGAGGCTGAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTCTTTAGTAGAGATTTaGCCTTCACTGTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPSLVEI*PSLLSL
Trigger: GAGAGACAACAGTGAAGGCAAAATCTCTACTAAAGA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATATTTCCACACCCACCTaGGAGTCCTCAAGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHISTPT*ESSSPD
Trigger: GTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAAT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCAAGGGCTGCCTTTTTaGTTGTTCATTCAGTTGATC +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAQGLPF*LFIQLI
Trigger: GATCAACTGAATGAACAACAAAAAAGGCAGCCCTTG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGAGAGCTCACCATTCATaGGCAAGGAGGCATAGAGCT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQRAHHS*ARRHRA
Trigger: AGCTCTATGCCTCCTTGCCAATGAATGGTGAGCTCT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTCCAAGGTCGAGCTTaGGCTGTATGCAACACTGCA +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLQGRA*AVCNTA
Trigger: TGCAGTGTTGCATACAGCCAAAGCTCGACCTTGGAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCTCCAAGGTCGAGCTTaGGCTGTATGCAACACTGCA +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLQGRA*AVCNTA
Trigger: TGCAGTGTTGCATACAGCCAAAGCTCGACCTTGGAG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTGGCCAACATGATGTaGTGTTTGAATCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLANMM*CLNLLL
Trigger: AAGCAACAGATTCAAACACAACATCATGTTGGCCAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAATTCCGCACTCCAGCTaGTCAGAGTTTTCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRIPHSS*SEFSPS
Trigger: AGAAGGCGAAAACTCTGACAAGCTGGAGTGCGGAAT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGAGCAGATACTGTGTTaGGGATTTTCACAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVREQILC*GFSQAP
Trigger: TGGGGCCTGTGAAAATCCCAAACACAGTATCTGCTC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATATCCCCAGCTGCTGTaGACAAAGCTGAGTGAGATC +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRYPQLL*TKLSEI
Trigger: GATCTCACTCAGCTTTGTCAACAGCAGCTGGGGATA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTATCCCCAGCTGCTGTaGACAAAGCTGAGTGAGATC +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQYPQLL*TKLSEI
Trigger: GATCTCACTCAGCTTTGTCAACAGCAGCTGGGGATA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCATGGAGTCTTCCGTTaGGCTTTCATCTTGGGCATC +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQHGVFR*AFILGI
Trigger: GATGCCCAAGATGAAAGCCAAACGGAAGACTCCATG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTCCAAAGTTCCAGGGTaGGGAAGGCTATGGTACACT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQSKVPG*GRLWYT
Trigger: AGTGTACCATAGCCTTCCCAACCCTGGAACTTTGGA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGTTCTGGAACCAGACTaGGACCACTCTTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVVLEPD*DHSFLQ
Trigger: CTGAAGAAAAGAGTGGTCCAAGTCTGGTTCCAGAAC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTGTGGTTGCTGGTTTTaGCAAAGAGTCAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPCGCWF*QRVKSF
Trigger: AAAACTCTTGACTCTTTGCAAAAACCAGCAACCACA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACACCTGCACCACTCGTTaGGGCAGACCAATCTCATTG +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHTCTTR*GRPISL
Trigger: CAATGAGATTGGTCTGCCCAAACGAGTGGTGCAGGT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGTTTCCCCTACCACTTaGCCCAACACTGTAAGAGCA +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRVSPTT*PNTVRA
Trigger: TGCTCTTACAGTGTTGGGCAAAGTGGTAGGGGAAAC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGTTTCCCCTACCACTTaGCCCAACACTGTAAGAGCA +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQVSPTT*PNTVRA
Trigger: TGCTCTTACAGTGTTGGGCAAAGTGGTAGGGGAAAC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGCGAAGCACTGTTTCTaGAGGGTCAATCAATGGCTG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRAKHCF*RVNQWL
Trigger: CAGCCATTGATTGACCCTCAAGAAACAGTGCTTCGC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp TCCCTCATCTCCTGTGGTTGCATCACTGATGGCCGTATTAATAGATaGGGTCTCATCAAAGTCAGTTTTACTCTGATCATACCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SLISCGCITDGRINR*GLIKVSFTLIIPSI
Trigger: GATGCTGGGTATGATCAGAGTAAAACTGACTTTGATGAGACCTCATCTATTAATACGGCCATCAGTGATGCAACCACAGGAGATGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp ATTGCTTTTGGACTTAAAGGGGTTGCTAGACCCAAATGGATTTGGTaGACTGGGATCAGCTATGCTAGATGTTTCACTGCGGTCAGCATT +
Preference number: 5 (lower is better)
Translates to: IAFGLKGVARPKWIW*TGISYARCFTAVSI
Trigger: AATGCTGACCGCAGTGAAACATCTAGCATAGCTGATCCCAGTTCACCAAATCCATTTGGGTCTAGCAACCCCTTTAAGTCCAAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp AGAGTTTGCTGTTTGCCCCAGTCTGTGCATTCTGTCCACTTTCTTTaGAGTCCTCAATTATATACGCTGATCCATCAGGCTGGTAAACTA +
Preference number: 5 (lower is better)
Translates to: RVCCLPQSVHSVHFL*SPQLYTLIHQAGKL
Trigger: TAGTTTACCAGCCTGATGGATCAGCGTATATAATTGAGGACTCCAAAGAAAGTGGACAGAATGCACAGACTGGGGCAAACAGCAAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp AATCAAAATAAATGTATTTCTGTGGACTCTCTCCCCCATCCTCTGTaGATATTAAAGGGCTTGGTGGCAAGCTATAACCTGCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: NQNKCISVDSLPHPL*ILKGLVASYNLPAS
Trigger: GGAAGCAGGCAGGTTATAGCTTGCCACCAAGCCCTTTAATATCCACAGAGGATGGGGGAGAGAGTCCACAGAAATACATTTATTTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTCTGTCCACTTTCTTaGGAGTCCTCAATTATATAC +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPFCPLS*ESSIIY
Trigger: GTATATAATTGAGGACTCCAAAGAAAGTGGACAGAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGAAAAGAGTTTGCTGTTaGCCCCAGTCTGTGCATTCT +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVKRVCC*PQSVHS
Trigger: AGAATGCACAGACTGGGGCAAACAGCAAACTCTTTT...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTAATGCTGAGGTATTaGGGAAAGCCGGATCGGCTG +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLMLRY*GKPDRL
Trigger: CAGCCGATCCGGCTTTCCCAAATACCTCAGCATTAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGACACACAGGAGTTTTaGGCTGAGCCATCACTGGTT +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIDTQEF*AEPSLV
Trigger: AACCAGTGATGGCTCAGCCAAAAACTCCTGTGTGTC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGTTTGGCCTTTCACAGTaGTTCTCTTGGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVFGLSQ*FSWSLL
Trigger: GAGCAAAGACCAAGAGAACAACTGTGAAAGGCCAAA...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTCCACTCATTGCTTTaGCCCCCTTCCTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLHSLL*PPSLMW
Trigger: CCACATCAAGGAAGGGGGCAAAAGCAATGAGTGGAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACATTCACCGCACCCTCTaGCTTCTGCAAGTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHIHRTL*LLQVLV
Trigger: TACAAGCACTTGCAGAAGCAAGAGGGTGCGGTGAAT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTATTCACCGCACCCTCTaGCTTCTGCAAGTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIIHRTL*LLQVLV
Trigger: TACAAGCACTTGCAGAAGCAAGAGGGTGCGGTGAAT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAGAGCTCACCATTCATaGGCAAGGAGGCATAGAGCT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNRAHHS*ARRHRA
Trigger: AGCTCTATGCCTCCTTGCCAATGAATGGTGAGCTCT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCAACTCGTGCTGAAGTaGCATCTGGATTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIQLVLK*HLDLCW
Trigger: CCAGCACAAATCCAGATGCAACTTCAGCACGAGTTG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TGGCAGTGTATAGGGATATCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTTTGTGTTTGAATCTGTaGCTTCAGATCTTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: WQCIGISLNSVLRAQGYPLCLNL*LQIFKQ
Trigger: TTGCTTGAAGATCTGAAGCAACAGATTCAAACACAA...AGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGATATCCCTATACACTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCAACAGTTTGCTTGGTaGCTGTTGAGGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNQQFAW*LLRLLL
Trigger: CAGCAGCAACCTCAACAGCAACCAAGCAAACTGTTG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACATTCCGCACTCCAGCTaGTCAGAGTTTTCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNIPHSS*SEFSPS
Trigger: AGAAGGCGAAAACTCTGACAAGCTGGAGTGCGGAAT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTCTCATAGCTCTTCCTaGCTTTCTGCCGAGCATTCT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQSHSSS*LSAEHS
Trigger: AGAATGCTCGGCAGAAAGCAAGGAAGAGCTATGAGA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAAGGGTTGCAGTGCTTTaGGCTGTATCTGTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRRVAVL*AVSVCP
Trigger: TGGACAAACAGATACAGCCAAAAGCACTGCAACCCT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAGGTCTTCCAATCAGTaGGGGTTGCTTGGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSRSSNQ*GLLGRL
Trigger: CAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTCCAAAGTTCCAGGGTaGGGAAGGCTATGGTACACT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSKVPG*GRLWYT
Trigger: AGTGTACCATAGCCTTCCCAACCCTGGAACTTTGGA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGTGGAGGAATTGGTTTaGAGCAGCGAGGAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHVEELV*SSEEVH
Trigger: ATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCAC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTGTGGTGGGTGTGGTaGCTGGTTTTTGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLWWVW*LVFAKS
Trigger: ACTCTTTGCAAAAACCAGCAACCACACCCACCACAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ACTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCACCATCTTTGTCATaGAAGTGGATTGATGGACTT +
Preference number: 5 (lower is better)
Translates to: TVAHCVNCQDRSISQCCCSPSLS*KWIDGL
Trigger: AAGTCCATCAATCCACTTCAATGACAAAGATGGTGA...GCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATTTTTCTCCGATTCTTaGTTCTGTGGCTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRFFSDS*FCGSVC
Trigger: GCAGACCGAGCCACAGAACAAAGAATCGGAGAAAAA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTGGGTCCCCAGCAATaGCATTCTGCAAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSLGPQQ*HSARPA
Trigger: TGCAGGCCTTGCAGAATGCAATTGCTGGGGACCCAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp GCTTTTTATTTAATTCTTTGGCATCTAAGTGGGTATCTTTGCTGTTaGCTGAAGCTAAGCTCATGGACTCTAACATCCCTTGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AFYLILWHLSGYLCC*LKLSSWTLTSLGQG
Trigger: GCCCTGGCCAAGGGATGTTAGAGTCCATGAGCTTAGCTTCAGTCAACAGCAAAGATACCCACTTAGATGCCAAAGAATTAAATAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GGGTGTAAGATGGTACTTTCTTTTGGCCTTTCACAGTTGTTCTCTTaGTCTTTGCTCTCTGACATCTTGCTAGACTCAGATGATAAGTGG +
Preference number: 5 (lower is better)
Translates to: GCKMVLSFGLSQLFS*SLLSDILLDSDDKW
Trigger: CCACTTATCATCTGAGTCTAGCAAGATGTCAGAGAGCAAAGACCAAGAGAACAACTGTGAAAGGCCAAAAGAAAGTACCATCTTACACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAGCAAGACTTCACTTTaGCGCTCATCCGTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSKTSL*RSSVFR
Trigger: CCTGAAAACGGATGAGCGCAAAAGTGAAGTCTTGCT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTTTCTGTCCACTTTCTTaGGAGTCCTCAATTATATAC +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAFCPLS*ESSIIY
Trigger: GTATATAATTGAGGACTCCAAAGAAAGTGGACAGAA...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTTGGCCTTTCACAGTaGTTCTCTTGGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQFGLSQ*FSWSLL
Trigger: GAGCAAAGACCAAGAGAACAACTGTGAAAGGCCAAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAAGGTAAGGTCCGCTTaGGTTCCAAGCCCAGATCAT +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHKVRSA*VPSPDH
Trigger: ATGATCTGGGCTTGGAACCAAAGCGGACCTTACCTT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCAACTCGTGCTGAAGTaGCATCTGGATTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHQLVLK*HLDLCW
Trigger: CCAGCACAAATCCAGATGCAACTTCAGCACGAGTTG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGGTGTTTGATGACTTTTaGAGAGAGGCCAGATTTCTC +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVVFDDF*REARFL
Trigger: GAGAAATCTGGCCTCTCTCAAAAAGTCATCAAACAC...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTATTGCACTTTTTGCATaGGTATTGCATGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAIALFA*VLHVAC
Trigger: ACAAGCAACATGCAATACCAATGCAAAAAGTGCAAT...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCGTTTGGCTTTCATCTaGGGCATCATCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQRLAFI*GIIIFI
Trigger: GATGAAGATGATGATGCCCAAGATGAAAGCCAAACG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTTGGCTGTATCTGTTaGTCCAGACACCATGCAATG +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQFGCIC*SRHHAM
Trigger: CATTGCATGGTGTCTGGACAAACAGATACAGCCAAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp CTGTTGCACATTGTGTTAACTGCCAGGACAGATCGATCTCACAATGCTGCTGCTCAGGATATTCAGTTTTaGGAGAATTCTTCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LLHIVLTARTDRSHNAAAQDIQF*ENSSQV
Trigger: AACCTGAGAAGAATTCTCCAAAAACTGAATATCCTG...AGCAGCAGCATTGTGAGATCGATCTGTCCTGGCAGTTAACACAATGTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAGAAGTCATGGAAATTaGCAGTGGGCTGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHRSHGN*QWAGRD
Trigger: ATCCCTTCCAGCCCACTGCAAATTTCCATGACTTCT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGACCAGTCATCAGTGGATaGTTGGGGTCAAATATCATG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRPVISG*LGSNIM
Trigger: CATGATATTTGACCCCAACAATCCACTGATGACTGG...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGTTCTGGAACCAGACTaGGACCACTCTTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIVLEPD*DHSFLQ
Trigger: CTGAAGAAAAGAGTGGTCCAAGTCTGGTTCCAGAAC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATGGATATTAAAGGGCTaGGTGGCAAGCTATAACCTG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRWILKG*VASYNL
Trigger: CAGGTTATAGCTTGCCACCAAGCCCTTTAATATCCA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCTGTGGTGGGTGTGGTaGCTGGTTTTTGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHLWWVW*LVFAKS
Trigger: ACTCTTTGCAAAAACCAGCAACCACACCCACCACAG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGCGAAGCACTGTTTCTaGAGGGTCAATCAATGGCTG +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHAKHCF*RVNQWL
Trigger: CAGCCATTGATTGACCCTCAAGAAACAGTGCTTCGC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTTCCTGGCGGATGCTaGGAAAAGGATATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIFPGGC*EKDIRP
Trigger: TGGCCTAATATCCTTTTCCAAGCATCCGCCAGGAAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp ATGGCCGTATTAATAGATGAGGTCTCATCAAAGTCAGTTTTACTCTaGTCATACCCAGCATCAGCCGAAGGGGCATTTAGATTCTCTACA +
Preference number: 5 (lower is better)
Translates to: MAVLIDEVSSKSVLL*SYPASAEGAFRFST
Trigger: TGTAGAGAATCTAAATGCCCCTTCGGCTGATGCTGGGTATGATCAGAGTAAAACTGACTTTGATGAGACCTCATCTATTAATACGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 90 bp TTTTTCATTATCTTTAGCTTCTGCTTGGTTCTCATAGCTCTTCCTTaGTTTCTGCCGAGCATTCTGGAACCATACAACAATAACCCGGGT +
Preference number: 5 (lower is better)
Translates to: FFIIFSFCLVLIALP*FLPSILEPYNNNPG
Trigger: ACCCGGGTTATTGTTGTATGGTTCCAGAATGCTCGGCAGAAAGCAAGGAAGAGCTATGAGAACCAAGCAGAAGCTAAAGATAATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 90 bp GGTTTAGCTTTCACTTCCAAAGAATTATCTAAGTCTTGTAGCTTCTaGCTCAGCTCACTGTCAGACTCATCTGAACAACTTTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: GLAFTSKELSKSCSF*LSSLSDSSEQLSVG
Trigger: ACCCACAGAAAGTTGTTCAGATGAGTCTGACAGTGAGCTGAGCCAGAAGCTACAAGACTTAGATAATTCTTTGGAAGTGAAAGCTAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTCATCCGTTTTCAGGTaGTCATGTGAGGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNSSVFR*SCEELF
Trigger: AAACAGCTCCTCACATGACAACCTGAAAACGGATGA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCCAGAAACATTGCTGTaGAAAAGAGTTTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVPETLL*KRVCCL
Trigger: CAAACAGCAAACTCTTTTCAACAGCAATGTTTCTGG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATTGTTAGGGACATCTTaGGACACACAGGAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRLLGTS*DTQEFL
Trigger: CAAAAACTCCTGTGTGTCCAAAGATGTCCCTAACAA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGAGAGGTTCTTTGTCTTaGCCAATCCCCTGTATTATG +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQRGSLS*PIPCIM
Trigger: CATAATACAGGGGATTGGCAAAGACAAAGAACCTCT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGCTTATAAGAGGTTCTTaGTCTTTGCCAATCCCCTGT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLIRGS*SLPIPC
Trigger: ACAGGGGATTGGCAAAGACAAAGAACCTCTTATAAG...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATCGTCATCGAGTTCATaGGAATATGCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRSSSSS*EYASSS
Trigger: TGAAGAGGATGCATATTCCAATGAACTCGATGACGA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAGCCATGCTGGTGTGTaGTTGAACTGTCCTCGTCTC +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSSHAGV*LNCPRL
Trigger: GAGACGAGGACAGTTCAACAACACACCAGCATGGCT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAAACCGTGTCACATTTaGGACACTCAATGCCATTGC +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIKPCHI*DTQCHC
Trigger: GCAATGGCATTGAGTGTCCAAAATGTGACACGGTTT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGACCACCAAGAGACCTaGAAGACCCCAAAACCGTGT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSDHQET*KTPKPC
Trigger: ACACGGTTTTGGGGTCTTCAAGGTCTCTTGGTGGTC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAAGCCTGGGATGAGGTaGTCCAGTCTTACAATAAAC +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIKPGMR*SSLTIN
Trigger: GTTTATTGTAAGACTGGACAACCTCATCCCAGGCTT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TATGTAACCCAGGCATTGAGTGTACACGTTGTTGTAGACAATGATTGCGCTGTGCTCGCCATTGCCATTTaGAAGATTCTGAACATTGTT +
Preference number: 5 (lower is better)
Translates to: YVTQALSVHVVVDNDCAVLAIAI*KILNIV
Trigger: AACAATGTTCAGAATCTTCAAAATGGCAATGGCGAG...CACAGCGCAATCATTGTCTACAACAACGTGTACACTCAATGCCTGGGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGATCAGAGGTGAATTTGTaGCAAACAGCACACTGGAAT +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRSEVNL*QTAHWN
Trigger: ATTCCAGTGTGCTGTTTGCAACAAATTCACCTCTGA...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACTGGGTATCTTTGCTGTaGACTGAAGCTAAGCTCATG +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNWVSLL*TEAKLM
Trigger: CATGAGCTTAGCTTCAGTCAACAGCAAAGATACCCA...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAGTGTTTGATGACTTTTaGAGAGAGGCCAGATTTCTC +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRVFDDF*REARFL
Trigger: GAGAAATCTGGCCTCTCTCAAAAAGTCATCAAACAC...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGATCTTTAGCTTCTGCTaGGTTCTCATAGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQIFSFC*VLIALP
Trigger: AGGAAGAGCTATGAGAACCAAGCAGAAGCTAAAGAT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTCGTTTGGCTTTCATCTaGGGCATCATCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIRLAFI*GIIIFI
Trigger: GATGAAGATGATGATGCCCAAGATGAAAGCCAAACG...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACATGCTTGTACAACACTaGATCAGTGGCATCCATGGA +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHMLVQH*ISGIHG
Trigger: TCCATGGATGCCACTGATCAAGTGTTGTACAAGCAT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTAGGGGTCACTCTGCTTaGTCTTTTCTCCAGGATATT +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIRGHSA*SFLQDI
Trigger: AATATCCTGGAGAAAAGACAAAGCAGAGTGACCCCT...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGAGGAAGTGCATGTGTaGGTGTTCCTTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHEEVHV*VFLPKF
Trigger: GAACTTTGGAAGGAACACCAACACATGCACTTCCTC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCAGCATTTCACATTCTaGCATGGTTGGAGTCCGATA +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNQHFTF*HGWSPI
Trigger: TATCGGACTCCAACCATGCAAGAATGTGAAATGCTG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAACCTGCACCACTCGTTaGGGCAGACCAATCTCATTG +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSTCTTR*GRPISL
Trigger: CAATGAGATTGGTCTGCCCAAACGAGTGGTGCAGGT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATGTCGACACACTGTCGGATCATCCTTTGTAAAACGGTCCTTTGTTTTGTGAGAACAGTCTCCCTCACTTaGGAAATATGCTGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: MSTHCRIILCKTVLCFVRTVSLT*EICCLE
Trigger: TTCCAAACAGCATATTTCCAAAGTGAGGGAGACTGT...TCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGTGTCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGGAAAACTCTGCACTCTaGGAATCTAACTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQENSAL*ESNWTS
Trigger: AGAAGTCCAGTTAGATTCCAAGAGTGCAGAGTTTTC...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTGTTAGGGACATCTTaGGACACACAGGAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQILLGTS*DTQEFL
Trigger: CAAAAACTCCTGTGTGTCCAAAGATGTCCCTAACAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCTTATAAGAGGTTCTTaGTCTTTGCCAATCCCCTGT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNLIRGS*SLPIPC
Trigger: ACAGGGGATTGGCAAAGACAAAGAACCTCTTATAAG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTTGTTCTCTTGGTCTTaGCTCTCTGACATCTTGCTA +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLFSWS*LSDILL
Trigger: TAGCAAGATGTCAGAGAGCAAAGACCAAGAGAACAA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTTTGTTCTCTTGGTCTTaGCTCTCTGACATCTTGCTA +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQILFSWS*LSDILL
Trigger: TAGCAAGATGTCAGAGAGCAAAGACCAAGAGAACAA...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTTTTGGTTCCTGTGTaGTCTTCTTTGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSLLVPV*SSLASR
Trigger: CCTGCTGGCCAAAGAAGACAACACAGGAACCAAAAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TCACTGAATTCAGTCCTACGTGCGCAGGGCTATCCTCTTTATACAAAACAAATTGTAGTAGCATACTGTTaGGCATCATTACATCAGGGA +
Preference number: 5 (lower is better)
Translates to: SLNSVLRAQGYPLYTKQIVVAYC*ASLHQG
Trigger: TCCCTGATGTAATGATGCCAAACAGTATGCTACTAC...AATTTGTTTTGTATAAAGAGGATAGCCCTGCGCACGTAGGACTGAATTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCAAGGGCTGCCTTTTTaGTTGTTCATTCAGTTGATC +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNQGLPF*LFIQLI
Trigger: GATCAACTGAATGAACAACAAAAAAGGCAGCCCTTG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTTGGCCAACATGATGTaGTGTTTGAATCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQLANMM*CLNLLL
Trigger: AAGCAACAGATTCAAACACAACATCATGTTGGCCAA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACAAATTGGAGCTGAGTTaGGCCAACATGATGTTGTGT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHKLELS*ANMMLC
Trigger: ACACAACATCATGTTGGCCAAACTCAGCTCCAATTT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACAACAGTTTGCTTGGTaGCTGTTGAGGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSQQFAW*LLRLLL
Trigger: CAGCAGCAACCTCAACAGCAACCAAGCAAACTGTTG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTCCATATGGGAAAAATaGCCCATGCACATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSIWEK*PMHMFL
Trigger: CAAGAACATGTGCATGGGCAATTTTTCCCATATGGA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACGGGAAGAAGGAGAAATaGGATAAAGCTTGTCATAGG +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNGKKEK*DKACHR
Trigger: CCTATGACAAGCTTTATCCAATTTCTCCTTCTTCCC...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACATCTTTAGCTTCTGCTaGGTTCTCATAGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHIFSFC*VLIALP
Trigger: AGGAAGAGCTATGAGAACCAAGCAGAAGCTAAAGAT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGACCACATTGCACTTTTaGCATTGGTATTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQTTLHF*HWYCML
Trigger: CAACATGCAATACCAATGCAAAAAGTGCAATGTGGT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACATGGAGTCTTCCGTTaGGCTTTCATCTTGGGCATC +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSHGVFR*AFILGI
Trigger: GATGCCCAAGATGAAAGCCAAACGGAAGACTCCATG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGCGTTTATCACGGTGTaGATCTTCACCGCTATTCCC +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSAFITV*IFTAIP
Trigger: GGGAATAGCGGTGAAGATCAACACCGTGATAAACGC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGTGTGGTTGCTGGTTTTaGCAAAGAGTCAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQCGCWF*QRVKSF
Trigger: AAAACTCTTGACTCTTTGCAAAAACCAGCAACCACA...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACCGTGATGTAAAAGCTTaGGTCATGGTCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNRDVKA*VMVTIF
Trigger: AAAGATGGTGACCATGACCAAAGCTTTTACATCACG...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATCAGCATTTCACATTCTaGCATGGTTGGAGTCCGATA +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHQHFTF*HGWSPI
Trigger: TATCGGACTCCAACCATGCAAGAATGTGAAATGCTG...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACACCATCTGTTCCACTTaGATTGATCATGAACGGCTT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNTICST*IDHERL
Trigger: AAGCCGTTCATGATCAATCAAAGTGGAACAGATGGT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACGAAAACTCTGCACTCTaGGAATCTAACTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHENSAL*ESNWTS
Trigger: AGAAGTCCAGTTAGATTCCAAGAGTGCAGAGTTTTC...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp CGTTCCTTAAAGAGTGTATTTCGAAACCAGTGTTTGATGACTTTTTaGGAGAGGCCAGATTTCTCAGCCATTTCTTGGATCTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RSLKSVFRNQCLMTF*ERPDFSAISWICSS
Trigger: TGAAGAACAGATCCAAGAAATGGCTGAGAAATCTGGCCTCTCTCAAAAAGTCATCAAACACTGGTTTCGAAATACACTCTTTAAGGAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 90 bp GTAAAAGCTTTGGTCATGGTCACCATCTTTGTCATTGAAGTGGATTaGTGGACTTGTGAGAGAAAAGAGAAATTTGTCATCACAGACCTC +
Preference number: 5 (lower is better)
Translates to: VKALVMVTIFVIEVD*WTCERKEKFVITDL
Trigger: GAGGTCTGTGATGACAAATTTCTCTTTTCTCTCACAAGTCCATCAATCCACTTCAATGACAAAGATGGTGACCATGACCAAAGCTTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCCAGAAACATTGCTGTaGAAAAGAGTTTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHPETLL*KRVCCL
Trigger: CAAACAGCAAACTCTTTTCAACAGCAATGTTTCTGG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTCGTCATCGAGTTCATaGGAATATGCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHSSSSS*EYASSS
Trigger: TGAAGAGGATGCATATTCCAATGAACTCGATGACGA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGTAGTAGCATACTGTTaGGCATCATTACATCAGGGA +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHVVAYC*ASLHQG
Trigger: TCCCTGATGTAATGATGCCAAACAGTATGCTACTAC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGAACATGATGTTGTGTTaGAATCTGTTGCTTCAGATC +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQNMMLC*NLLLQI
Trigger: GATCTGAAGCAACAGATTCAAACACAACATCATGTT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATTGTGTCGAAAAAGTCTaGAAGAACCCTAAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHCVEKV*KNPKLV
Trigger: TACCAGCTTAGGGTTCTTCAAGACTTTTTCGACACA...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATCTCATAGCTCTTCCTaGCTTTCTGCCGAGCATTCT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSSHSSS*LSAEHS
Trigger: AGAATGCTCGGCAGAAAGCAAGGAAGAGCTATGAGA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AGGGATGACACTGGTGTAAAAACAGCTTGTGTCAAGACAAACTGCAATACACAGATTGCACTTTTTGCATaGGTATTGCATGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RDDTGVKTACVKTNCNTQIALFA*VLHVAC
Trigger: ACAAGCAACATGCAATACCAATGCAAAAAGTGCAAT...CTGTGTATTGCAGTTTGTCTTGACACAAGCTGTTTTTACACCAGTGTCATCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACACCACATTGCACTTTTaGCATTGGTATTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHTTLHF*HWYCML
Trigger: CAACATGCAATACCAATGCAAAAAGTGCAATGTGGT...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAGGGTTGCAGTGCTTTaGGCTGTATCTGTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSRVAVL*AVSVCP
Trigger: TGGACAAACAGATACAGCCAAAAGCACTGCAACCCT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACTCACCATCTTTGTCATaGAAGTGGATTGATGGACTT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHSPSLS*KWIDGL
Trigger: AAGTCCATCAATCCACTTCAATGACAAAGATGGTGA...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATACAGTCTCCCTCACTTaGGAAATATGCTGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHTVSLT*EICCLE
Trigger: TTCCAAACAGCATATTTCCAAAGTGAGGGAGACTGT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATGGACTTAAAAGATTTTaGGGTGACAGTTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHGLKRF*GDSSAV
Trigger: AACAGCAGAACTGTCACCCAAAAATCTTTTAAGTCC...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp TTGTTAGGAGTTACACTTCTAACAAATGCAGACCAAACTGTTGCTGCACTACACCTTGTTTGGCTTAGTTaGCTTTTTCTCCGATTCTTT +
Preference number: 5 (lower is better)
Translates to: LLGVTLLTNADQTVAALHLVWLS*LFLRFF
Trigger: AAAGAATCGGAGAAAAAGCAAACTAAGCCAAACAAG...GTGTAGTGCAGCAACAGTTTGGTCTGCATTTGTTAGAAGTGTAACTCCTAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp AAACAATTCTTGCTCTCAACCTTTGGAGGCTGTCCTTTTATTTCTCACCCTAACAATCTAACATGCTCTTaGGCATTTCTCATTGCTTGT +
Preference number: 5 (lower is better)
Translates to: KQFLLSTFGGCPFISHPNNLTCS*AFLIAC
Trigger: ACAAGCAATGAGAAATGCCAAAGAGCATGTTAGATT...GTTAGGGTGAGAAATAAAAGGACAGCCTCCAAAGGTTGAGAGCAAGAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATCATTCCACATAGCTTaGATGTGCTCTGCCCATTTT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSSFHIA*MCSAHF
Trigger: AAAATGGGCAGAGCACATCAAAGCTATGTGGAATGA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATTGCTCTCTGACATCTaGCTAGACTCAGATGATAAG +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSLLSDI*LDSDDK
Trigger: CTTATCATCTGAGTCTAGCAAGATGTCAGAGAGCAA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATCAGAGGTGAATTTGTaGCAAACAGCACACTGGAAT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSSEVNL*QTAHWN
Trigger: ATTCCAGTGTGCTGTTTGCAACAAATTCACCTCTGA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAGGACTGGAGGCTTCTaGCAAAACCTTTTTCAACTT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSRTGGF*QNLFQL
Trigger: AAGTTGAAAAAGGTTTTGCAAGAAGCCTCCAGTCCT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAGGGAAGAAGGAGAAATaGGATAAAGCTTGTCATAGG +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSGKKEK*DKACHR
Trigger: CCTATGACAAGCTTTATCCAATTTCTCCTTCTTCCC...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATGTGTCGAAAAAGTCTaGAAGAACCCTAAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSCVEKV*KNPKLV
Trigger: TACCAGCTTAGGGTTCTTCAAGACTTTTTCGACACA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAAAGAGTCAAGAGTTTaGGTTTCTTTAGGGGACAAA +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHKESRV*VSLGDK
Trigger: TTTGTCCCCTAAAGAAACCAAAACTCTTGACTCTTT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACGTGATGTAAAAGCTTaGGTCATGGTCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSRDVKA*VMVTIF
Trigger: AAAGATGGTGACCATGACCAAAGCTTTTACATCACG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAACCATCTGTTCCACTTaGATTGATCATGAACGGCTT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSTICST*IDHERL
Trigger: AAGCCGTTCATGATCAATCAAAGTGGAACAGATGGT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp ATATATTACAAGCGCATTCAACCACCTGCATTAGTCTTCTTCACCACATACCATAATCTAACATGCTCTTaGGCATTTCTCATTGCTTGT +
Preference number: 5 (lower is better)
Translates to: IYYKRIQPPALVFFTTYHNLTCS*AFLIAC
Trigger: ACAAGCAATGAGAAATGCCAAAGAGCATGTTAGATT...ATGGTATGTGGTGAAGAAGACTAATGCAGGTGGTTGAATGCGCTTGTAATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCATCCATTCGGACACTATaGAAATTACCATCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSSIRTL*KLPSRP
Trigger: TGGCCTAGATGGTAATTTCAATAGTGTCCGAATGGA...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 90 bp TGCTTTGGTTTAAGAGAGGGAAATCTTTATTACCAATACTATCTGTaGGTTCACCTAATACTTCCTCGTCATCGAGTTCATTGGAATATG +
Preference number: 5 (lower is better)
Translates to: CFGLREGNLYYQYYL*VHLILPRHRVHWNM
Trigger: CATATTCCAATGAACTCGATGACGAGGAAGTATTAGGTGAACTCACAGATAGTATTGGTAATAAAGATTTCCCTCTCTTAAACCAAAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTCGCCATTGCCATTTaGAAGATTCTGAACATTGTT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSLAIAI*KILNIV
Trigger: AACAATGTTCAGAATCTTCAAAATGGCAATGGCGAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACAGGATATTCAGTTTTaGGAGAATTCTTCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSQDIQF*ENSSQV
Trigger: AACCTGAGAAGAATTCTCCAAAAACTGAATATCCTG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCAAAAGAGTCAAGAGTTTaGGTTTCTTTAGGGGACAAA +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSKESRV*VSLGDK
Trigger: TTTGTCCCCTAAAGAAACCAAAACTCTTGACTCTTT...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS-3UTR CAA 90 bp GCAGCTTCTTTGCTTTCCCGAGAAGCAAATATACCTTTTCATAATTTTTGTTCACTTGTTTGGCTTAGTTaGCTTTTTCTCCGATTCTTT +
Preference number: 5 (lower is better)
Translates to: AASLLSREANIPFHNFCSLVWLS*LFLRFF
Trigger: AAAGAATCGGAGAAAAAGCAAACTAAGCCAAACAAG...TGAACAAAAATTATGAAAAGGTATATTTGCTTCTCGGGAAAGCAAAGAAGCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS GCA 72 bp GTGAGATCTGCTGAGAGGGTGTCCATCTGGGGCAGCTaGAGGGCCAGCTGTGGGGGAAGTGCAGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: VRSAERVSIWGS*RASCGGSAGCC
Trigger: GCAGCACCCTGCACTTCCCCCACAGCTGGCCCTGCAGCTGCCCCAGATGGACACCCTCTCAGCAGATCTCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GAGGAGGAGGAGGAGGAGGTGGAGGCGGTGGAGGAGTaGGTGGTGGAGCTTGCAGAGGAGCAGATACTGTGT +
Preference number: 6 (lower is better)
Translates to: EEEEEEVEAVEE*VVELAEEQILC
Trigger: ACACAGTATCTGCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTCCACCTCCTCCTCCTCCTCCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CGCAGGGGCGGTAGTGTGGGCAGTACTGGTCTGTGGTaGCATTTGAGTGAGAGAGCTCCCCAGGAGCTGTCC +
Preference number: 6 (lower is better)
Translates to: RRGGSVGSTGLW*HLSERAPQELS
Trigger: GGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGCCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp CCCCAGCTGCTGTTGACAAAGCTGAGTGAGATCTGCTaGGAGGGTGTCCATCTGGGGCAGCTGCAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PQLLLTKLSEIC*EGVHLGQLQGQ
Trigger: CTGGCCCTGCAGCTGCCCCAGATGGACACCCTCTCAGCAGATCTCACTCAGCTTTGTCAACAGCAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp GGAGGAGGAGGAGGTGGTGGTGGAGGTGGTGGAGTCTaGAGCAAAGATTTGGTGGGGCCACTGCTGAGAGAC +
Preference number: 6 (lower is better)
Translates to: GGGGGGGGGGGV*SKDLVGPLLRD
Trigger: GTCTCTCAGCAGTGGCCCCACCAAATCTTTGCTGCAGACTCCACCACCTCCACCACCACCTCCTCCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp AACCAGCCATGCCAGTCATACCTGGCACCCCAAATGTaGTGGAGGTGGGCAAGCCCAGATCTGGCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: NQPCQSYLAPQM*WRWASPDLAPS
Trigger: GCTTGGGGCCAGATCTGGGCTTGCCCACCTCCACCACATTTGGGGTGCCAGGTATGACTGGCATGGCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp AGGAGGAGGAGGAGGTGGAGGCGGTGGAGGAGTGGGTaGTGGAGCTTGCAGAGGAGCAGATACTGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: RRRRRWRRWRSG*WSLQRSRYCVW
Trigger: CCAAACACAGTATCTGCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTCCACCTCCTCCTCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GGGGTTGCTTGGGCGGCTGTGTTGGAGGCTGGGGTATaGACGCCTGCTGTGGCTCTGAAGAAGTCAGTACTG +
Preference number: 6 (lower is better)
Translates to: GVAWAAVLEAGV*TPAVALKKSVL
Trigger: CAGTACTGACTTCTTCAGAGCCACAGCAGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp ACGCTGAGGGAGGTCTTCCAATCAGTTGGGGTTGCTTaGGCGGCTGTGTTGGAGGCTGGGGTATGGACGCCT +
Preference number: 6 (lower is better)
Translates to: TLREVFQSVGVA*AAVLEAGVWTP
Trigger: AGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCTCCCTCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp ACTCGCAGGGGCGGTAGTGTGGGCAGTACTGGTCTGTaGTGGCATTTGAGTGAGAGAGCTCCCCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: TRRGGSVGSTGL*WHLSERAPQEL
Trigger: CAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGCCCCTGCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TCCTTGGTTTCCGAAGCCTCGTTGGAGCTCTGCGGCTaGTCGCCCTCGCCTTTGGCTGTCTTGGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: SLVSEASLELCG*SPSPLAVLAGT
Trigger: AGTTCCTGCCAAGACAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAACCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GTCTTCCAATCAGTTGGGGTTGCTTGGGCGGCTGTGTaGGAGGCTGGGGTATGGACGCCTGCTGTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: VFQSVGVAWAAV*EAGVWTPAVAL
Trigger: CAGAGCCACAGCAGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCAACTGATTGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp TGTGACGCTGAGGGAGGTCTTCCAATCAGTTGGGGTTaGTTGGGCGGCTGTGTTGGAGGCTGGGGTATGGAC +
Preference number: 6 (lower is better)
Translates to: CDAEGGLPISWG*LGGCVGGWGMD
Trigger: GTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCTCCCTCAGCGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GGGTGTTCCACAGCCACTGAGGCTAGTGTTAGGGGTTaGAGCAGAGTGGCCAAACACCTGCTCGCCATTGCC +
Preference number: 6 (lower is better)
Translates to: GCSTATEASVRG*SRVAKHLLAIA
Trigger: GGCAATGGCGAGCAGGTGTTTGGCCACTCTGCTCCAACCCCTAACACTAGCCTCAGTGGCTGTGGAACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp AGGAGGAGGAGGAGGTGGAGGCGGTGGAGGAGTGGGTGGTGGAGCTaGCAGAGGAGCAGATACTGTGTTTGGGATTTTCACAGGCCCCAA +
Preference number: 6 (lower is better)
Translates to: RRRRRWRRWRSGWWS*QRSRYCVWDFHRPQ
Trigger: TTGGGGCCTGTGAAAATCCCAAACACAGTATCTGCTCCTCTGCAAGCTCCACCACCCACTCCTCCACCGCCTCCACCTCCTCCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp CTGAGGGAGGTCTTCCAATCAGTTGGGGTTGCTTGGGCGGCTGTGTaGGAGGCTGGGGTATGGACGCCTGCTGTGGCTCTGAAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: LREVFQSVGVAWAAV*EAGVWTPAVALKKS
Trigger: TGACTTCTTCAGAGCCACAGCAGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAAGCAACCCCAACTGATTGGAAGACCTCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GTTTCCGAAGCCTCGTTGGAGCTCTGCGGCTGGTCGCCCTCGCCTTaGGCTGTCTTGGCAGGAACTGGTTTCTGCTGCTGTTCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: VSEASLELCGWSPSP*AVLAGTGFCCCSCC
Trigger: ACAGCAAGAACAGCAGCAGAAACCAGTTCCTGCCAAGACAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp ACTCGCAGGGGCGGTAGTGTGGGCAGTACTGGTCTGTGGTGGCATTaGAGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCATCAGTGGATT +
Preference number: 6 (lower is better)
Translates to: TRRGGSVGSTGLWWH*SERAPQELSSHQWI
Trigger: AATCCACTGATGACTGGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGCCCCTGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GAGGTACTGCAGGACCATAGGGAAAGAGACTCTCCATGCCACAGATaGGTGGCAGGTAGCCTCCCTGCACTGTTCCAGGGAGCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: EVLQDHRERDSPCHR*VAGSLPALFQGAEV
Trigger: CACCTCAGCTCCCTGGAACAGTGCAGGGAGGCTACCTGCCACCAATCTGTGGCATGGAGAGTCTCTTTCCCTATGGTCCTGCAGTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp CTTTCGGGAGCAGTACTTTTCTCTTCCTTGGTTTCCGAAGCCTCGTaGGAGCTCTGCGGCTGGTCGCCCTCGCCTTTGGCTGTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LSGAVLFSSLVSEAS*ELCGWSPSPLAVLA
Trigger: TGCCAAGACAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTACTGCTCCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp CTCCTCCAGGACCTGGTGTACCAGGTGTGCTCGGGGTaGAGCCATGCTGGTGTGTTGTTGAACTGTCCTCGT +
Preference number: 6 (lower is better)
Translates to: LLQDLVYQVCSG*SHAGVLLNCPR
Trigger: ACGAGGACAGTTCAACAACACACCAGCATGGCTTCACCCCGAGCACACCTGGTACACCAGGTCCTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GCGGTAGTGTGGGCAGTACTGGTCTGTGGTGGCATTTaGGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCATC +
Preference number: 6 (lower is better)
Translates to: AVVWAVLVCGGI*VRELPRSCPVI
Trigger: GATGACTGGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp TTGGGCGGCTGTGTTGGAGGCTGGGGTATGGACGCCTaGTGTGGCTCTGAAGAAGTCAGTACTGATGAGGGA +
Preference number: 6 (lower is better)
Translates to: LGGCVGGWGMDA*CGSEEVSTDEG
Trigger: TCCCTCATCAGTACTGACTTCTTCAGAGCCACAGCAGGCGTCCATACCCCAGCCTCCAACACAGCCGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GAAGGAAAGAGGGGGAGGTCAAGGGAAACAGGCAATTaGACCTGTTGTGGTGCAGATGGGGGAGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: EGKRGRSRETGN*TCCGADGGGGG
Trigger: CCCACCTCCTCCCCCATCTGCACCACAACAGGTCCAATTGCCTGTTTCCCTTGACCTCCCCCTCTTTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp AGCTCTGCGGCTGGTCGCCCTCGCCTTTGGCTGTCTTaGCAGGAACTGGTTTCTGCTGCTGTTCTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: SSAAGRPRLWLS*QELVSAAVLAV
Trigger: AACAGCAAGAACAGCAGCAGAAACCAGTTCCTGCCAAGACAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CAGTACTTTTCTCTTCCTTGGTTTCCGAAGCCTCGTTaGAGCTCTGCGGCTGGTCGCCCTCGCCTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: QYFSLPWFPKPR*SSAAGRPRLWL
Trigger: CAGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CCGGATTTCAGGCGGCAGCTCATTATTTACAAGTCCTaGTGCCAGAGCCGCTGCTGTGGCGGAGTCGAACTG +
Preference number: 6 (lower is better)
Translates to: PDFRRQLIIYKS*CQSRCCGGVEL
Trigger: CAGTTCGACTCCGCCACAGCAGCGGCTCTGGCACCAGGACTTGTAAATAATGAGCTGCCGCCTGAAATCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CAA 72 bp GGAAGGAAAGAGGGGGAGGTCAAGGGAAACAGGCAATaGGACCTGTTGTGGTGCAGATGGGGGAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GRKEGEVKGNRQ*DLLWCRWGRRW
Trigger: CCACCTCCTCCCCCATCTGCACCACAACAGGTCCAATTGCCTGTTTCCCTTGACCTCCCCCTCTTTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GGCGGTAGTGTGGGCAGTACTGGTCTGTGGTGGCATTaGAGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCAT +
Preference number: 6 (lower is better)
Translates to: GGSVGSTGLWWH*SERAPQELSSH
Trigger: ATGACTGGACAGCTCCTGGGGAGCTCTCTCACTCAAATGCCACCACAGACCAGTACTGCCCACACTACCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GCAGTACTTTTCTCTTCCTTGGTTTCCGAAGCCTCGTaGGAGCTCTGCGGCTGGTCGCCCTCGCCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: AVLFSSLVSEAS*ELCGWSPSPLA
Trigger: AGCCAAAGGCGAGGGCGACCAGCCGCAGAGCTCCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp ATCTTCAAGCAAGGAACCAGCCATGCCAGTCATACCTaGCACCCCAAATGTGGTGGAGGTGGGCAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: IFKQGTSHASHT*HPKCGGGGQAQ
Trigger: CTGGGCTTGCCCACCTCCACCACATTTGGGGTGCCAGGTATGACTGGCATGGCTGGTTCCTTGCTTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp ACCATAGGGAAAGAGACTCTCCATGCCACAGATTGGTaGCAGGTAGCCTCCCTGCACTGTTCCAGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: TIGKETLHATDW*QVASLHCSREL
Trigger: CAGCTCCCTGGAACAGTGCAGGGAGGCTACCTGCCACCAATCTGTGGCATGGAGAGTCTCTTTCCCTATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp AGGTGTGCTCGGGGTGAAGCCATGCTGGTGTGTTGTTaGACTGTCCTCGTCTCCATGGGTCGTTTCACTAGG +
Preference number: 6 (lower is better)
Translates to: RCARGEAMLVCC*TVLVSMGRFTR
Trigger: CCTAGTGAAACGACCCATGGAGACGAGGACAGTTCAACAACACACCAGCATGGCTTCACCCCGAGCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GTGGCGGAGTCGAACTGGAAAGGGTTAAGCAGGAGCTaGGTCTCGGCAGGATTTTCCAGCTTCATCCCTGTC +
Preference number: 6 (lower is better)
Translates to: VAESNWKGLSRS*VSAGFSSFIPV
Trigger: GACAGGGATGAAGCTGGAAAATCCTGCCGAGACTCAGCTCCTGCTTAACCCTTTCCAGTTCGACTCCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp CACTGCAGGTGCTGCACTTGTAGGGCTTATTATCTGTaGTGCTATTGGCTTCCTGGGGGACAGGACTGGAGG +
Preference number: 6 (lower is better)
Translates to: HCRCCTCRAYYL*CYWLPGGQDWR
Trigger: CCTCCAGTCCTGTCCCCCAGGAAGCCAATAGCAGCACAGATAATAAGCCCTACAAGTGCAGCACCTGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp CACCTCCCCAGAACCTCCCGTGTTTTCCATATCTGCTaGTCCCTCATCTCCTGTGGTTGCATCACTGATGGC +
Preference number: 6 (lower is better)
Translates to: HLPRTSRVFHIC*SLISCGCITDG
Trigger: GCCATCAGTGATGCAACCACAGGAGATGAGGGAGCAGCAGATATGGAAAACACGGGAGGTTCTGGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp GATTTCAGGCGGCAGCTCATTATTTACAAGTCCTGGTaGCAGAGCCGCTGCTGTGGCGGAGTCGAACTGGAA +
Preference number: 6 (lower is better)
Translates to: DFRRQLIIYKSW*QSRCCGGVELE
Trigger: TTCCAGTTCGACTCCGCCACAGCAGCGGCTCTGGCACCAGGACTTGTAAATAATGAGCTGCCGCCTGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CCA 72 bp CTGTGGGAGGCTTCAGAGGGTCTCCTGCATCTTCACTaGGTTCTTCTGAGGCCGCCTTCAATTGCTGCTCTA +
Preference number: 6 (lower is better)
Translates to: LWEASEGLLHLH*VLLRPPSIAAL
Trigger: TAGAGCAGCAATTGAAGGCGGCCTCAGAAGAACCCAGTGAAGATGCAGGAGACCCTCTGAAGCCTCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GGAGACACACTGTGCAAATGGGTCAGATGCAGCTGCAGGTGCATCTaGTTGCTGAGAACATCCTGGCAGAGTGGACAGCAGATGACTGGC +
Preference number: 6 (lower is better)
Translates to: GDTLCKWVRCSCRCI*LLRTSWQSGQQMTG
Trigger: GCCAGTCATCTGCTGTCCACTCTGCCAGGATGTTCTCAGCAACAAGATGCACCTGCAGCTGCATCTGACCCATTTGCACAGTGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp CTTCATCCTCATCTCCCGGCTCAGTGGGTTCACTTTTaGCAGGGCACCCCACATTCGGGTGTAAGATGGTAC +
Preference number: 6 (lower is better)
Translates to: LHPHLPAQWVHF*QGTPHSGVRWY
Trigger: GTACCATCTTACACCCGAATGTGGGGTGCCCTGTCAAAAGTGAACCCACTGAGCCGGGAGATGAGGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GAGTGGACAGCAGATGACTGGCTGTACAGAGTGCTGTaGCAGGACATGCATCTGGATCCGACTTTGGTCCCT +
Preference number: 6 (lower is better)
Translates to: EWTADDWLYRVL*QDMHLDPTLVP
Trigger: AGGGACCAAAGTCGGATCCAGATGCATGTCCTGTCACAGCACTCTGTACAGCCAGTCATCTGCTGTCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GGCGTGATGGTGGTTCTCAAGCGTTTATCACGGTGTTaGTCTTCACCGCTATTCCCGCCCTCCTTCTCACTG +
Preference number: 6 (lower is better)
Translates to: GVMVVLKRLSRC*SSPLFPPSFSL
Trigger: CAGTGAGAAGGAGGGCGGGAATAGCGGTGAAGATCAACACCGTGATAAACGCTTGAGAACCACCATCACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GGGTCCCCAGCAATTGCATTCTGCAAGGCCTGCAGCTaGGTAGGATCCATGTGTGTTTCCCCTACCACTTTG +
Preference number: 6 (lower is better)
Translates to: GSPAIAFCKACS*VGSMCVSPTTL
Trigger: CAAAGTGGTAGGGGAAACACACATGGATCCTACTCAGCTGCAGGCCTTGCAGAATGCAATTGCTGGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp CATTCCTCTTCAGGGAGAGAGCGCTCGCTGTTCACATaGACACTTAGAGCCTCCAGGCTGTCAGAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: HSSSGRERSLFT*TLRASRLSEVN
Trigger: ATTCACCTCTGACAGCCTGGAGGCTCTAAGTGTGCATGTGAACAGCGAGCGCTCTCTCCCTGAAGAGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp GGTGGGCAAGCCCAGATCTGGCCCCAAGCTAAACTCTaGCCCAGGTATATAGAATGGAAAGAGAAACTGGGG +
Preference number: 6 (lower is better)
Translates to: GGQAQIWPQAKL*PRYIEWKEKLG
Trigger: CCCCAGTTTCTCTTTCCATTCTATATACCTGGGGCAGAGTTTAGCTTGGGGCCAGATCTGGGCTTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TGCAGCTGCAGGTGCATCTTGTTGCTGAGAACATCCTaGCAGAGTGGACAGCAGATGACTGGCTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: CSCRCILLLRTS*QSGQQMTGCTE
Trigger: CTCTGTACAGCCAGTCATCTGCTGTCCACTCTGCCAGGATGTTCTCAGCAACAAGATGCACCTGCAGCTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GCCCTGGCCTTTGTCTGGTGGAGCACTGATCTCATGTaGATCTCCAAGGTCGAGCTTTGGCTGTATGCAACA +
Preference number: 6 (lower is better)
Translates to: ALAFVWWSTDLM*ISKVELWLYAT
Trigger: TGTTGCATACAGCCAAAGCTCGACCTTGGAGATCCACATGAGATCAGTGCTCCACCAGACAAAGGCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp AAACAGCACACTGGAATAGCTTCAGCGCCGGGTCACTaGTATAAGGTGACAGCTCTCCAAGTCCTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: KQHTGIASAPGH*YKVTALQVLVP
Trigger: TGGCACCAGGACTTGGAGAGCTGTCACCTTATATCAGTGACCCGGCGCTGAAGCTATTCCAGTGTGCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS TCA 72 bp CAGGTAGCCTCCCTGCACTGTTCCAGGGAGCTGAGGTaGAAAGTAGGATGCAAACCCAGGGATAAAGTATGG +
Preference number: 6 (lower is better)
Translates to: QVASLHCSRELR*KVGCKPRDKVW
Trigger: CCATACTTTATCCCTGGGTTTGCATCCTACTTTTCACCTCAGCTCCCTGGAACAGTGCAGGGAGGCTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp GACACACTGTGCAAATGGGTCAGATGCAGCTGCAGGTaGATCTTGTTGCTGAGAACATCCTGGCAGAGTGGA +
Preference number: 6 (lower is better)
Translates to: DTLCKWVRCSCR*ILLLRTSWQSG
Trigger: TCCACTCTGCCAGGATGTTCTCAGCAACAAGATGCACCTGCAGCTGCATCTGACCCATTTGCACAGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp CCGCTGGCAGAGGGTACACATTGTAGCCGCCCGGATTaGATGATACTGGGAATGTATCTGAAGCTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: PLAEGTHCSRPD*MILGMYLKLLH
Trigger: ATGCAGAAGCTTCAGATACATTCCCAGTATCATGCAATCCGGGCGGCTACAATGTGTACCCTCTGCCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp TCTGTTGCTTCAGATCTTCAAGCAAGGAACCAGCCATaGCAGTCATACCTGGCACCCCAAATGTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: SVASDLQARNQP*QSYLAPQMWWR
Trigger: CCTCCACCACATTTGGGGTGCCAGGTATGACTGGCATGGCTGGTTCCTTGCTTGAAGATCTGAAGCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TCTTCATCCTCATCTCCCGGCTCAGTGGGTTCACTTTaGACAGGGCACCCCACATTCGGGTGTAAGATGGTA +
Preference number: 6 (lower is better)
Translates to: SSSSSPGSVGSL*TGHPTFGCKMV
Trigger: TACCATCTTACACCCGAATGTGGGGTGCCCTGTCAAAAGTGAACCCACTGAGCCGGGAGATGAGGATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp ACACTTAGAGCCTCCAGGCTGTCAGAGGTGAATTTGTaGCAAACAGCACACTGGAATAGCTTCAGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: TLRASRLSEVNL*QTAHWNSFSAG
Trigger: CCCGGCGCTGAAGCTATTCCAGTGTGCTGTTTGCAACAAATTCACCTCTGACAGCCTGGAGGCTCTAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp AGGCGTGATGGTGGTTCTCAAGCGTTTATCACGGTGTaGATCTTCACCGCTATTCCCGCCCTCCTTCTCACT +
Preference number: 6 (lower is better)
Translates to: RRDGGSQAFITV*IFTAIPALLLT
Trigger: AGTGAGAAGGAGGGCGGGAATAGCGGTGAAGATCAACACCGTGATAAACGCTTGAGAACCACCATCACGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TCTTTTGTGCTTTCGGGAGCAGTACTTTTCTCTTCCTaGGTTTCCGAAGCCTCGTTGGAGCTCTGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: SFVLSGAVLFSS*VSEASLELCGW
Trigger: CCAGCCGCAGAGCTCCAACGAGGCTTCGGAAACCAAGGAAGAGAAAAGTACTGCTCCCGAAAGCACAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp CATCCTGGGTCATTGTCTCACTCTCTGCCCAGAGCTCACCATTCATaGGCAAGGAGGCATAGAGCTGCTGCAGTTCAGCTTCACTCAGTT +
Preference number: 6 (lower is better)
Translates to: HPGSLSHSLPRAHHS*ARRHRAAAVQLHSV
Trigger: AACTGAGTGAAGCTGAACTGCAGCAGCTCTATGCCTCCTTGCCAATGAATGGTGAGCTCTGGGCAGAGAGTGAGACAATGACCCAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp ATTTCTGTGGACTCTCTCCCCCATCCTCTGTGGATATTAAAGGGCTaGGTGGCAAGCTATAACCTGCCTGCTTCCCCTCATTCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: ISVDSLPHPLWILKG*VASYNLPASPHSSG
Trigger: GCCACTGGAATGAGGGGAAGCAGGCAGGTTATAGCTTGCCACCAAGCCCTTTAATATCCACAGAGGATGGGGGAGAGAGTCCACAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp CTTCAGAGGGTCTCCTGCATCTTCACTGGGTTCTTCTaGGGCCGCCTTCAATTGCTGCTCTATAAGTTCGTC +
Preference number: 6 (lower is better)
Translates to: LQRVSCIFTGFF*GRLQLLLYKFV
Trigger: GACGAACTTATAGAGCAGCAATTGAAGGCGGCCTCAGAAGAACCCAGTGAAGATGCAGGAGACCCTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp CTAACATCCCTTGGCCAGGGCTATTCACAGCAGCTGTaGTGCTATGACCACTGGGTAGGTGTCTACTTGGTT +
Preference number: 6 (lower is better)
Translates to: LTSLGQGYSQQL*CYDHWVGVYLV
Trigger: AACCAAGTAGACACCTACCCAGTGGTCATAGCATCACAGCTGCTGTGAATAGCCCTGGCCAAGGGATGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp CCTCTTCTGCCTCCTTGTAAGATGGCATGTCCTTCATaGGTTGGCAGTCTGTACTTGCCAGGCTACCTTGCT +
Preference number: 6 (lower is better)
Translates to: PLLPPCKMACPS*VGSLYLPGYLA
Trigger: AGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTCATGAAGGACATGCCATCTTACAAGGAGGCAGAAGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TTTTGCTGTTTCTGTAGGGAATCTTGCAGGCTCTGCTaGTACTGTTGGTACTGCTGTAGAAGCGCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: FCCFCRESCRLC*YCWYCCRSAPG
Trigger: CCCAGGGGCGCTTCTACAGCAGTACCAACAGTATCAGCAGAGCCTGCAAGATTCCCTACAGAAACAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp ATCTGGGATAGAGCTGCTGTCGCTCTCTACAGGACTTaGCTTCCCTTCATGGTCCACCTCATATTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: IWDRAAVALYRT*LPFMVHLIFSL
Trigger: GAGAGAGAATATGAGGTGGACCATGAAGGGAAGGCAAGTCCTGTAGAGAGCGACAGCAGCTCTATCCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TCAGGATGGCCTGCTTCCAAGTGTTTCTTTAAAGCCTaGAATGTACGGAAACTCCGCTGGCAGAGGGTACAC +
Preference number: 6 (lower is better)
Translates to: SGWPASKCFFKA*NVRKLRWQRVH
Trigger: GTGTACCCTCTGCCAGCGGAGTTTCCGTACATTCCAGGCTTTAAAGAAACACTTGGAAGCAGGCCATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp AGTGAGAGAGCTCCCCAGGAGCTGTCCAGTCATCAGTaGATTGTTGGGGTCAAATATCATGTAGGGCATGTC +
Preference number: 6 (lower is better)
Translates to: SERAPQELSSHQ*IVGVKYHVGHV
Trigger: GACATGCCCTACATGATATTTGACCCCAACAATCCACTGATGACTGGACAGCTCCTGGGGAGCTCTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp ACACCCACCTTGGAGTCCTCAAGCCCTGACATGCTTTaGTCATCCACTGGGCTGTCACCTGAATATTTCCCA +
Preference number: 6 (lower is better)
Translates to: TPTLESSSPDML*SSTGLSPEYFP
Trigger: TGGGAAATATTCAGGTGACAGCCCAGTGGATGACAAAAGCATGTCAGGGCTTGAGGACTCCAAGGTGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TCATTGTCTCACTCTCTGCCCAGAGCTCACCATTCATaGGCAAGGAGGCATAGAGCTGCTGCAGTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: SLSHSLPRAHHS*ARRHRAAAVQL
Trigger: AAGCTGAACTGCAGCAGCTCTATGCCTCCTTGCCAATGAATGGTGAGCTCTGGGCAGAGAGTGAGACAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp CCAGAGCCTGAACTGGCTACTAGGGTTGCAGTGCTTTaGGCTGTATCTGTTTGTCCAGACACCATGCAATGC +
Preference number: 6 (lower is better)
Translates to: PEPELATRVAVL*AVSVCPDTMQC
Trigger: GCATTGCATGGTGTCTGGACAAACAGATACAGCCAAAAGCACTGCAACCCTAGTAGCCAGTTCAGGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GAGGAATTGGTTTTGAGCAGCGAGGAAGTGCATGTGTaGGTGTTCCTTCCAAAGTTCCAGGGTTGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: EELVLSSEEVHV*VFLPKFQGWEG
Trigger: GCCTTCCCAACCCTGGAACTTTGGAAGGAACACCAACACATGCACTTCCTCGCTGCTCAAAACCAATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp CACTCTTCTCTCCAGCAGATGCCAGGGAGTCCAGAAACATTGCTGTaGAAAAGAGTTTGCTGTTTGCCCCAGTCTGTGCATTCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: HSSLQQMPGSPETLL*KRVCCLPQSVHSVH
Trigger: GTGGACAGAATGCACAGACTGGGGCAAACAGCAAACTCTTTTCAACAGCAATGTTTCTGGACTCCCTGGCATCTGCTGGAGAGAAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TTCACATGCACACTTAGAGCCTCCAGGCTGTCAGAGGTGAATTTGTaGCAAACAGCACACTGGAATAGCTTCAGCGCCGGGTCACTGATA +
Preference number: 6 (lower is better)
Translates to: FTCTLRASRLSEVNL*QTAHWNSFSAGSLI
Trigger: TATCAGTGACCCGGCGCTGAAGCTATTCCAGTGTGCTGTTTGCAACAAATTCACCTCTGACAGCCTGGAGGCTCTAAGTGTGCATGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TCCTTTGCTGGCTTCTGTTCCTCATTCTTTATTTCCACACCCACCTaGGAGTCCTCAAGCCCTGACATGCTTTTGTCATCCACTGGGCTG +
Preference number: 6 (lower is better)
Translates to: SFAGFCSSFFISTPT*ESSSPDMLLSSTGL
Trigger: CAGCCCAGTGGATGACAAAAGCATGTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAATAAAGAATGAGGAACAGAAGCCAGCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp ATTCTCTCTCCATTTCCTGATCTATGCCATGGTCATCCTGGGTCATaGTCTCACTCTCTGCCCAGAGCTCACCATTCATTGGCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: ILSPFPDLCHGHPGS*SHSLPRAHHSLARR
Trigger: CCTCCTTGCCAATGAATGGTGAGCTCTGGGCAGAGAGTGAGACAATGACCCAGGATGACCATGGCATAGATCAGGAAATGGAGAGAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp AGTCTGTACTTGCCAGGCTACCTTGCTCTTGTTTCAACAGTTTGCTaGGTTGCTGTTGAGGTTGCTGCTGTTGTGGTAGGGGAGGCTGTT +
Preference number: 6 (lower is better)
Translates to: SLYLPGYLALVSTVC*VAVEVAAVVVGEAV
Trigger: AACAGCCTCCCCTACCACAACAGCAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GAGGTGGAGGTGGAGGCGGTGGTGTTTCTGGGGAAGAAGGAGAAATaGGATAAAGCTTGTCATAGGCCTCCCTGTATTGACGAGCAAATT +
Preference number: 6 (lower is better)
Translates to: EVEVEAVVFLGKKEK*DKACHRPPCIDEQI
Trigger: AATTTGCTCGTCAATACAGGGAGGCCTATGACAAGCTTTATCCAATTTCTCCTTCTTCCCCAGAAACACCACCGCCTCCACCTCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GTGCTAGTCCCAGAGCCTGAACTGGCTACTAGGGTTGCAGTGCTTTaGGCTGTATCTGTTTGTCCAGACACCATGCAATGCTTGTACAAC +
Preference number: 6 (lower is better)
Translates to: VLVPEPELATRVAVL*AVSVCPDTMQCLYN
Trigger: GTTGTACAAGCATTGCATGGTGTCTGGACAAACAGATACAGCCAAAAGCACTGCAACCCTAGTAGCCAGTTCAGGCTCTGGGACTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp CAGCGAGGAAGTGCATGTGTTGGTGTTCCTTCCAAAGTTCCAGGGTaGGGAAGGCTATGGTACACTGATCACATGGGTACTGGAGTAACT +
Preference number: 6 (lower is better)
Translates to: QRGSACVGVPSKVPG*GRLWYTDHMGTGVT
Trigger: AGTTACTCCAGTACCCATGTGATCAGTGTACCATAGCCTTCCCAACCCTGGAACTTTGGAAGGAACACCAACACATGCACTTCCTCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TGGAGAGTGGAGGAATTGGTTTTGAGCAGCGAGGAAGTGCATGTGTaGGTGTTCCTTCCAAAGTTCCAGGGTTGGGAAGGCTATGGTACA +
Preference number: 6 (lower is better)
Translates to: WRVEELVLSSEEVHV*VFLPKFQGWEGYGT
Trigger: TGTACCATAGCCTTCCCAACCCTGGAACTTTGGAAGGAACACCAACACATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GTAGGGCATGTCCATGGGTCTTTCCAAGAATGGAGAGTGGAGGAATaGGTTTTGAGCAGCGAGGAAGTGCATGTGTTGGTGTTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: VGHVHGSFQEWRVEE*VLSSEEVHVLVFLP
Trigger: TGGAAGGAACACCAACACATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGACATGCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GAGTTGCTCAGGCGTGATGGTGGTTCTCAAGCGTTTATCACGGTGTaGATCTTCACCGCTATTCCCGCCCTCCTTCTCACTGCAATTATT +
Preference number: 6 (lower is better)
Translates to: ELLRRDGGSQAFITV*IFTAIPALLLTAII
Trigger: AATAATTGCAGTGAGAAGGAGGGCGGGAATAGCGGTGAAGATCAACACCGTGATAAACGCTTGAGAACCACCATCACGCCTGAGCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp AGAAGTGGCACATTCGTTGCAGGGTATTTCCTTTGCTaGGGTGACCTGAGTGGCAGCTGCATTCTCAATGCT +
Preference number: 6 (lower is better)
Translates to: RSGTFVAGYFLC*GDLSGSCILNA
Trigger: AGCATTGAGAATGCAGCTGCCACTCAGGTCACCTCAGCAAAGGAAATACCCTGCAACGAATGTGCCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176175.2
ENSMUST00000176383.3
CDS TCA 72 bp GCAAAGCCAGCCTGCAAAGAGTCACCGTTTTCAACATaGAAAGCGCTCCATAAACCGCGGAAGGTTGGATCA +
Preference number: 6 (lower is better)
Translates to: AKPACKESPFST*KALHKPRKVGS
Trigger: TGATCCAACCTTCCGCGGTTTATGGAGCGCTTTTCATGTTGAAAACGGTGACTCTTTGCAGGCTGGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TCATTCCCACTGAGAGCCAGGTCACAGGCAAGACACTaGTATTTGCTGACTGGGATGCGAAGCACTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SFPLRARSQARH*YLLTGMRSTVS
Trigger: AGAAACAGTGCTTCGCATCCCAGTCAGCAAATATCAGTGTCTTGCCTGTGACCTGGCTCTCAGTGGGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp GGGTTGGAGCAGAGTGGCCAAACACCTGCTCGCCATTaGCATTTTGAAGATTCTGAACATTGTTCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: GLEQSGQTPARH*HFEDSEHCSGA
Trigger: AGCACCTGAACAATGTTCAGAATCTTCAAAATGGCAATGGCGAGCAGGTGTTTGGCCACTCTGCTCCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp TTTCCACACCCACCTTGGAGTCCTCAAGCCCTGACATaGTTTTGTCATCCACTGGGCTGTCACCTGAATATT +
Preference number: 6 (lower is better)
Translates to: FPHPPWSPQALT*FCHPLGCHLNI
Trigger: AATATTCAGGTGACAGCCCAGTGGATGACAAAAGCATGTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CTGTTAAGTTTTCCACATCACTGTCCTCTAACTCGCTaGTCTCACTCTCGTCATCCTTCAGGACAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: LLSFPHHCPLTR*SHSRHPSGQEG
Trigger: GCCTTCCTGTCCTGAAGGATGACGAGAGTGAGACCAGCGAGTTAGAGGACAGTGATGTGGAAAACTTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TGGAGGCGGTGGTGTTTCTGGGGAAGAAGGAGAAATTaGATAAAGCTTGTCATAGGCCTCCCTGTATTGACG +
Preference number: 6 (lower is better)
Translates to: WRRWCFWGRRRN*IKLVIGLPVLT
Trigger: CGTCAATACAGGGAGGCCTATGACAAGCTTTATCCAATTTCTCCTTCTTCCCCAGAAACACCACCGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CAGAGCCTGAACTGGCTACTAGGGTTGCAGTGCTTTTaGCTGTATCTGTTTGTCCAGACACCATGCAATGCT +
Preference number: 6 (lower is better)
Translates to: QSLNWLLGLQCF*LYLFVQTPCNA
Trigger: AGCATTGCATGGTGTCTGGACAAACAGATACAGCCAAAAGCACTGCAACCCTAGTAGCCAGTTCAGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GGTGTTCCTTCCAAAGTTCCAGGGTTGGGAAGGCTATaGTACACTGATCACATGGGTACTGGAGTAACTGTG +
Preference number: 6 (lower is better)
Translates to: GVPSKVPGLGRL*YTDHMGTGVTV
Trigger: CACAGTTACTCCAGTACCCATGTGATCAGTGTACCATAGCCTTCCCAACCCTGGAACTTTGGAAGGAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GCGGGCAGAGTACTTCACCCCACAGAGGGTACACTCTaGCTTAGTACCATCTGTTCCACTTTGATTGATCAT +
Preference number: 6 (lower is better)
Translates to: AGRVLHPTEGTL*LSTICSTLIDH
Trigger: ATGATCAATCAAAGTGGAACAGATGGTACTAAGCCAGAGTGTACCCTCTGTGGGGTGAAGTACTCTGCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TTGCCAGGCTACCTTGCTCTTGTTTCAACAGTTTGCTaGGTTGCTGTTGAGGTTGCTGCTGTTGTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: LPGYLALVSTVC*VAVEVAAVVVG
Trigger: CCCTACCACAACAGCAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TTCTGCCTCCTTGTAAGATGGCATGTCCTTCATGAGTaGGCAGTCTGTACTTGCCAGGCTACCTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: FCLLVRWHVLHE*AVCTCQATLLL
Trigger: CAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTCATGAAGGACATGCCATCTTACAAGGAGGCAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GAGAAGTCATGGAAATTTGCAGTGGGCTGGAAGGGATaGGAGTTTGTGACGCTGAGGGAGGTCTTCCAATCA +
Preference number: 6 (lower is better)
Translates to: EKSWKFAVGWKG*EFVTLREVFQS
Trigger: TGATTGGAAGACCTCCCTCAGCGTCACAAACTCCAATCCCTTCCAGCCCACTGCAAATTTCCATGACTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GTCCATGGGTCTTTCCAAGAATGGAGAGTGGAGGAATaGGTTTTGAGCAGCGAGGAAGTGCATGTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: VHGSFQEWRVEE*VLSSEEVHVLV
Trigger: CACCAACACATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TATGCATCCTCTTCATCCTCATCTCCCGGCTCAGTGGGTTCACTTTaGACAGGGCACCCCACATTCGGGTGTAAGATGGTACTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: YASSSSSSPGSVGSL*TGHPTFGCKMVLSF
Trigger: AAAAGAAAGTACCATCTTACACCCGAATGTGGGGTGCCCTGTCAAAAGTGAACCCACTGAGCCGGGAGATGAGGATGAAGAGGATGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TTTATTTCCACACCCACCTTGGAGTCCTCAAGCCCTGACATGCTTTaGTCATCCACTGGGCTGTCACCTGAATATTTCCCAGAACCCTCT +
Preference number: 6 (lower is better)
Translates to: FISTPTLESSSPDML*SSTGLSPEYFPEPS
Trigger: AGAGGGTTCTGGGAAATATTCAGGTGACAGCCCAGTGGATGACAAAAGCATGTCAGGGCTTGAGGACTCCAAGGTGGGTGTGGAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GTCCTTCATGAGTTGGCAGTCTGTACTTGCCAGGCTACCTTGCTCTaGTTTCAACAGTTTGCTTGGTTGCTGTTGAGGTTGCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: VLHELAVCTCQATLL*FQQFAWLLLRLLLL
Trigger: CAACAGCAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTCATGAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TGGCATGTCCTTCATGAGTTGGCAGTCTGTACTTGCCAGGCTACCTaGCTCTTGTTTCAACAGTTTGCTTGGTTGCTGTTGAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: WHVLHELAVCTCQAT*LLFQQFAWLLLRLL
Trigger: CAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTCATGAAGGACATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TGTTCTGAAGAGAAGTCATGGAAATTTGCAGTGGGCTGGAAGGGATaGGAGTTTGTGACGCTGAGGGAGGTCTTCCAATCAGTTGGGGTT +
Preference number: 6 (lower is better)
Translates to: CSEEKSWKFAVGWKG*EFVTLREVFQSVGV
Trigger: AACCCCAACTGATTGGAAGACCTCCCTCAGCGTCACAAACTCCAATCCCTTCCAGCCCACTGCAAATTTCCATGACTTCTCTTCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TTCCAAAGTTCCAGGGTTGGGAAGGCTATGGTACACTaGTCACATGGGTACTGGAGTAACTGTGGAGGTAGA +
Preference number: 6 (lower is better)
Translates to: FQSSRVGKAMVH*SHGYWSNCGGR
Trigger: TCTACCTCCACAGTTACTCCAGTACCCATGTGATCAGTGTACCATAGCCTTCCCAACCCTGGAACTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp AGCCAGGTCACAGGCAAGACACTGATATTTGCTGACTaGGATGCGAAGCACTGTTTCTTGAGGGTCAATCAA +
Preference number: 6 (lower is better)
Translates to: SQVTGKTLIFAD*DAKHCFLRVNQ
Trigger: TTGATTGACCCTCAAGAAACAGTGCTTCGCATCCCAGTCAGCAAATATCAGTGTCTTGCCTGTGACCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CTGTGTGGCCCCTGTCACAACTTTCAGCTCTTTCTCTaGGACGATTACAGGGTCTTTAGTAGAGATTTTGCC +
Preference number: 6 (lower is better)
Translates to: LCGPCHNFQLFL*DDYRVFSRDFA
Trigger: GGCAAAATCTCTACTAAAGACCCTGTAATCGTCCCAGAGAAAGAGCTGAAAGTTGTGACAGGGGCCACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CAA 72 bp GAGTTGGCAGTCTGTACTTGCCAGGCTACCTTGCTCTaGTTTCAACAGTTTGCTTGGTTGCTGTTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: ELAVCTCQATLL*FQQFAWLLLRL
Trigger: CAACCTCAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp CTGATCATCTGTAATCCGGGTCCGTGGCCGTTTGAATaGAGAATGTCTCAAGAAGTTAGGGTCTATCCCCAG +
Preference number: 6 (lower is better)
Translates to: LIICNPGPWPFE*RMSQEVRVYPQ
Trigger: CTGGGGATAGACCCTAACTTCTTGAGACATTCTCAATTCAAACGGCCACGGACCCGGATTACAGATGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp AGTGCATGTGTTGGTGTTCCTTCCAAAGTTCCAGGGTaGGGAAGGCTATGGTACACTGATCACATGGGTACT +
Preference number: 6 (lower is better)
Translates to: SACVGVPSKVPG*GRLWYTDHMGT
Trigger: AGTACCCATGTGATCAGTGTACCATAGCCTTCCCAACCCTGGAACTTTGGAAGGAACACCAACACATGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GGGTCTTTCCAAGAATGGAGAGTGGAGGAATTGGTTTaGAGCAGCGAGGAAGTGCATGTGTTGGTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: GSFQEWRVEELV*SSEEVHVLVFL
Trigger: AAGGAACACCAACACATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp ACTGATCACTCTTCTCTCCAGCAGATGCCAGGGAGTCCAGAAACATaGCTGTTGAAAAGAGTTTGCTGTTTGCCCCAGTCTGTGCATTCT +
Preference number: 6 (lower is better)
Translates to: TDHSSLQQMPGSPET*LLKRVCCLPQSVHS
Trigger: AGAATGCACAGACTGGGGCAAACAGCAAACTCTTTTCAACAGCAATGTTTCTGGACTCCCTGGCATCTGCTGGAGAGAAGAGTGATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp CCTTACTGCTGGTTTTATTCCATTCTGATGCCTCCACAGGCTCCTTaGCTGGCTTCTGTTCCTCATTCTTTATTTCCACACCCACCTTGG +
Preference number: 6 (lower is better)
Translates to: PYCWFYSILMPPQAP*LASVPHSLFPHPPW
Trigger: CCAAGGTGGGTGTGGAAATAAAGAATGAGGAACAGAAGCCAGCAAAGGAGCCTGTGGAGGCATCAGAATGGAATAAAACCAGCAGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp CATGTCCATGGGTCTTTCCAAGAATGGAGAGTGGAGGAATTGGTTTaGAGCAGCGAGGAAGTGCATGTGTTGGTGTTCCTTCCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: HVHGSFQEWRVEELV*SSEEVHVLVFLPKF
Trigger: GAACTTTGGAAGGAACACCAACACATGCACTTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GGCTGTATCTGTTTGTCCAGACACCATGCAATGCTTGTACAACACTaGATCAGTGGCATCCATGGAGTCTTCCGTTTGGCTTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: GCICLSRHHAMLVQH*ISGIHGVFRLAFIL
Trigger: CAAGATGAAAGCCAAACGGAAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTGGACAAACAGATACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TCACATGCACACTTAGAGCCTCCAGGCTGTCAGAGGTaGATTTGTTGCAAACAGCACACTGGAATAGCTTCA +
Preference number: 6 (lower is better)
Translates to: SHAHLEPPGCQR*ICCKQHTGIAS
Trigger: TGAAGCTATTCCAGTGTGCTGTTTGCAACAAATTCACCTCTGACAGCCTGGAGGCTCTAAGTGTGCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GCTTCACCGACCGAACATGTTGGACTAGGTTTAACTTaGTCTTGGAGGAGTAATCACACACCGCACAGTAGT +
Preference number: 6 (lower is better)
Translates to: ASPTEHVGLGLT*SWRSNHTPHSS
Trigger: ACTACTGTGCGGTGTGTGATTACTCCTCCAAGATCAAGTTAAACCTAGTCCAACATGTTCGGTCGGTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GATGTTCACATCCTTACTGCTGGTTTTATTCCATTCTaGTGCCTCCACAGGCTCCTTTGCTGGCTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: DVHILTAGFIPF*CLHRLLCWLLF
Trigger: GAACAGAAGCCAGCAAAGGAGCCTGTGGAGGCATCAGAATGGAATAAAACCAGCAGTAAGGATGTGAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GTTTGTCCAGACACCATGCAATGCTTGTACAACACTTaGTCAGTGGCATCCATGGAGTCTTCCGTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: VCPDTMQCLYNT*SVASMESSVWL
Trigger: AAGCCAAACGGAAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTGGACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TTTCACTGCGGTCAGCATTGTCGTCAGGGTCATCCGTaGTGTAAAAGCTTTGGTCATGGTCACCATCTTTGT +
Preference number: 6 (lower is better)
Translates to: FHCGQHCRQGHP*CKSFGHGHHLC
Trigger: ACAAAGATGGTGACCATGACCAAAGCTTTTACATCACGGATGACCCTGACGACAATGCTGACCGCAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp GGACTTAAAGGGGTTGCTAGACCCAAATGGATTTGGTaGACTGGGATCAGCTATGCTAGATGTTTCACTGCG +
Preference number: 6 (lower is better)
Translates to: GLKGVARPKWIW*TGISYARCFTA
Trigger: CGCAGTGAAACATCTAGCATAGCTGATCCCAGTTCACCAAATCCATTTGGGTCTAGCAACCCCTTTAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp TACTTGCCAGGCTACCTTGCTCTTGTTTCAACAGTTTaGTTGGTTGCTGTTGAGGTTGCTGCTGTTGTGGTA +
Preference number: 6 (lower is better)
Translates to: YLPGYLALVSTV*LVAVEVAAVVV
Trigger: TACCACAACAGCAGCAACCTCAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp AGATGGCATGTCCTTCATGAGTTGGCAGTCTGTACTTaGCAGGCTACCTTGCTCTTGTTTCAACAGTTTGCT +
Preference number: 6 (lower is better)
Translates to: RWHVLHELAVCT*QATLLLFQQFA
Trigger: AGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTCATGAAGGACATGCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TATCATGTAGGGCATGTCCATGGGTCTTTCCAAGAATaGAGAGTGGAGGAATTGGTTTTGAGCAGCGAGGAA +
Preference number: 6 (lower is better)
Translates to: YHVGHVHGSFQE*RVEELVLSSEE
Trigger: TTCCTCGCTGCTCAAAACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGACATGCCCTACATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp CTGTTTGCCCCAGTCTGTGCATTCTGTCCACTTTCTTaGGAGTCCTCAATTATATACGCTGATCCATCAGGC +
Preference number: 6 (lower is better)
Translates to: LFAPVCAFCPLS*ESSIIYADPSG
Trigger: GCCTGATGGATCAGCGTATATAATTGAGGACTCCAAAGAAAGTGGACAGAATGCACAGACTGGGGCAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TCACAGTTGTTCTCTTGGTCTTTGCTCTCTGACATCTaGCTAGACTCAGATGATAAGTGGCTGAGGGAGACG +
Preference number: 6 (lower is better)
Translates to: SQLFSWSLLSDI*LDSDDKWLRET
Trigger: CGTCTCCCTCAGCCACTTATCATCTGAGTCTAGCAAGATGTCAGAGAGCAAAGACCAAGAGAACAACTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GTGAGTTCACCTAATACTTCCTCGTCATCGAGTTCATaGGAATATGCATCCTCTTCATCCTCATCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: VSSPNTSSSSSS*EYASSSSSSPG
Trigger: GCCGGGAGATGAGGATGAAGAGGATGCATATTCCAATGAACTCGATGACGAGGAAGTATTAGGTGAACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp CTTCATGAGTTGGCAGTCTGTACTTGCCAGGCTACCTaGCTCTTGTTTCAACAGTTTGCTTGGTTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: LHELAVCTCQAT*LLFQQFAWLLL
Trigger: CAACAGCAACCAAGCAAACTGTTGAAACAAGAGCAAGGTAGCCTGGCAAGTACAGACTGCCAACTCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TTCTGGAACCATACAACAATAACCCGGGTGGGGAGGTaGAGAACAGTCGACAGCTGTTCTATTTCATCGTCT +
Preference number: 6 (lower is better)
Translates to: FWNHTTITRVGR*RTVDSCSISSS
Trigger: AGACGATGAAATAGAACAGCTGTCGACTGTTCTCAACCTCCCCACCCGGGTTATTGTTGTATGGTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TGTTTGTCCAGACACCATGCAATGCTTGTACAACACTaGATCAGTGGCATCCATGGAGTCTTCCGTTTGGCT +
Preference number: 6 (lower is better)
Translates to: CLSRHHAMLVQH*ISGIHGVFRLA
Trigger: AGCCAAACGGAAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTGGACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp ACCTTGTTTGGCTTAGTTTGCTTTTTCTCCGATTCTTaGTTCTGTGGCTCGGTCTGCTGTCCTGACAGAGAG +
Preference number: 6 (lower is better)
Translates to: TLFGLVCFFSDS*FCGSVCCPDRE
Trigger: CTCTCTGTCAGGACAGCAGACCGAGCCACAGAACAAAGAATCGGAGAAAAAGCAAACTAAGCCAAACAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp ATACTATCTGTGAGTTCACCTAATACTTCCTCGTCATCGAGTTCATaGGAATATGCATCCTCTTCATCCTCATCTCCCGGCTCAGTGGGT +
Preference number: 6 (lower is better)
Translates to: ILSVSSPNTSSSSSS*EYASSSSSSPGSVG
Trigger: ACCCACTGAGCCGGGAGATGAGGATGAAGAGGATGCATATTCCAATGAACTCGATGACGAGGAAGTATTAGGTGAACTCACAGATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GGCAAGACACTGATATTTGCTGACTGGGATGCGAAGCACTGTTTCTaGAGGGTCAATCAATGGCTGACCGAAATAACAGAAGGACTTTTG +
Preference number: 6 (lower is better)
Translates to: GKTLIFADWDAKHCF*RVNQWLTEITEGLL
Trigger: CAAAAGTCCTTCTGTTATTTCGGTCAGCCATTGATTGACCCTCAAGAAACAGTGCTTCGCATCCCAGTCAGCAAATATCAGTGTCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp AGGAGCCTCTGCTCCTCATCATTGAGAGTCATCCGATaGTCATGTACAGCATGGGTTACAAATGACCTGATA +
Preference number: 6 (lower is better)
Translates to: RSLCSSSLRVIR*SCTAWVTNDLI
Trigger: TATCAGGTCATTTGTAACCCATGCTGTACATGATCATCGGATGACTCTCAATGATGAGGAGCAGAGGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TCATCCTTCAGGACAGGAAGGCGGGCATTAGGGCAGTaGTGTTCCATATATTTCTGTAAACTGGGAAAAGAA +
Preference number: 6 (lower is better)
Translates to: SSFRTGRRALGQ*CSIYFCKLGKE
Trigger: TTCTTTTCCCAGTTTACAGAAATATATGGAACACCACTGCCCTAATGCCCGCCTTCCTGTCCTGAAGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TGTTTGCCCCAGTCTGTGCATTCTGTCCACTTTCTTTaGAGTCCTCAATTATATACGCTGATCCATCAGGCT +
Preference number: 6 (lower is better)
Translates to: CLPQSVHSVHFL*SPQLYTLIHQA
Trigger: AGCCTGATGGATCAGCGTATATAATTGAGGACTCCAAAGAAAGTGGACAGAATGCACAGACTGGGGCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CTTTGGACACACAGGAGTTTTTGGCTGAGCCATCACTaGTTAGATAGTCTTTCTCTCTCTTGTGTCGGAGAT +
Preference number: 6 (lower is better)
Translates to: LWTHRSFWLSHH*LDSLSLSCVGD
Trigger: ATCTCCGACACAAGAGAGAGAAAGACTATCTAACCAGTGATGGCTCAGCCAAAAACTCCTGTGTGTCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp CTGTGTGGCCCCTGTCACAACTTTCAGCTCTTTCTCTaGGACGATTACTTCAGGGTCTTTAGTAGAGATTTT +
Preference number: 6 (lower is better)
Translates to: LCGPCHNFQLFL*DDYFRVFSRDF
Trigger: AAAATCTCTACTAAAGACCCTGAAGTAATCGTCCCAGAGAAAGAGCTGAAAGTTGTGACAGGGGCCACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS CCA 72 bp CAGACACCATGCAATGCTTGTACAACACTTGATCAGTaGCATCCATGGAGTCTTCCGTTTGGCTTTCATCTT +
Preference number: 6 (lower is better)
Translates to: QTPCNACTTLDQ*HPWSLPFGFHL
Trigger: AAGATGAAAGCCAAACGGAAGACTCCATGGATGCCACTGATCAAGTGTTGTACAAGCATTGCATGGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GTAACTGTGGAGGTAGACTGTTCTGAAGAGAAGTCATaGAAATTTGCAGTGGGCTGGAAGGGATTGGAGTTT +
Preference number: 6 (lower is better)
Translates to: VTVEVDCSEEKS*KFAVGWKGLEF
Trigger: AAACTCCAATCCCTTCCAGCCCACTGCAAATTTCCATGACTTCTCTTCAGAACAGTCTACCTCCACAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GATTGTTGGGGTCAAATATCATGTAGGGCATGTCCATaGGTCTTTCCAAGAATGGAGAGTGGAGGAATTGGT +
Preference number: 6 (lower is better)
Translates to: DCWGQISCRACP*VFPRMESGGIG
Trigger: ACCAATTCCTCCACTCTCCATTCTTGGAAAGACCCATGGACATGCCCTACATGATATTTGACCCCAACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp CTGAGTTTGGCCAACATGATGTTGTGTTTGAATCTGTaGCTTCAGATCTTCAAGCAAGGAACCAGCCATGCC +
Preference number: 6 (lower is better)
Translates to: LSLANMMLCLNL*LQIFKQGTSHA
Trigger: GGCATGGCTGGTTCCTTGCTTGAAGATCTGAAGCAACAGATTCAAACACAACATCATGTTGGCCAAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GGTGTGGTTGCTGGTTTTTGCAAAGAGTCAAGAGTTTaGGTTTCTTTAGGGGACAAAGCTGGTTTCACCTCC +
Preference number: 6 (lower is better)
Translates to: GVVAGFCKESRV*VSLGDKAGFTS
Trigger: GGAGGTGAAACCAGCTTTGTCCCCTAAAGAAACCAAAACTCTTGACTCTTTGCAAAAACCAGCAACCACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp AGCTCTTTCTCTGGGACGATTACTTCAGGGTCTTTAGTAGAGATTTaGCCTTCACTGTTGTCTCTCTTGTGTGCCTCTTTCTCATCATCC +
Preference number: 6 (lower is better)
Translates to: SSFSGTITSGSLVEI*PSLLSLLCASFSSS
Trigger: GGATGATGAGAAAGAGGCACACAAGAGAGACAACAGTGAAGGCAAAATCTCTACTAAAGACCCTGAAGTAATCGTCCCAGAGAAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS CAA 90 bp AAATTGGAGCTGAGTTTGGCCAACATGATGTTGTGTTTGAATCTGTaGCTTCAGATCTTCAAGCAAGGAACCAGCCATGCCAGTCATACC +
Preference number: 6 (lower is better)
Translates to: KLELSLANMMLCLNL*LQIFKQGTSHASHT
Trigger: GGTATGACTGGCATGGCTGGTTCCTTGCTTGAAGATCTGAAGCAACAGATTCAAACACAACATCATGTTGGCCAAACTCAGCTCCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp GGTAGGATTAGAATCCAGCAAGTACTTTTCATAGAGTATTTCGAGTaGCTCAGGCGTGATGGTGGTTCTCAAGCGTTTATCACGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GRIRIQQVLFIEYFE*LRRDGGSQAFITVL
Trigger: CAACACCGTGATAAACGCTTGAGAACCACCATCACGCCTGAGCAACTCGAAATACTCTATGAAAAGTACTTGCTGGATTCTAATCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TTCAGCTCTTTCTCTGGGACGATTACAGGGTCTTTAGTAGAGATTTaGCCTTCACTGTTGTCTCTCTTGTGTGCCTCTTTCTCATCATCC +
Preference number: 6 (lower is better)
Translates to: FSSFSGTITGSLVEI*PSLLSLLCASFSSS
Trigger: GGATGATGAGAAAGAGGCACACAAGAGAGACAACAGTGAAGGCAAAATCTCTACTAAAGACCCTGTAATCGTCCCAGAGAAAGAGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CCA 72 bp TGGGATGCGAAGCACTGTTTCTTGAGGGTCAATCAATaGCTGACCGAAATAACAGAAGGACTTTTGATGGTT +
Preference number: 6 (lower is better)
Translates to: WDAKHCFLRVNQ*LTEITEGLLMV
Trigger: AACCATCAAAAGTCCTTCTGTTATTTCGGTCAGCCATTGATTGACCCTCAAGAAACAGTGCTTCGCATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TCTGGGACGATTACTTCAGGGTCTTTAGTAGAGATTTaGCCTTCACTGTTGTCTCTCTTGTGTGCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: SGTITSGSLVEI*PSLLSLLCASF
Trigger: GAAAGAGGCACACAAGAGAGACAACAGTGAAGGCAAAATCTCTACTAAAGACCCTGAAGTAATCGTCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS CAA 72 bp TGGTTTTATTCCATTCTGATGCCTCCACAGGCTCCTTaGCTGGCTTCTGTTCCTCATTCTTTATTTCCACAC +
Preference number: 6 (lower is better)
Translates to: WFYSILMPPQAP*LASVPHSLFPH
Trigger: GTGTGGAAATAAAGAATGAGGAACAGAAGCCAGCAAAGGAGCCTGTGGAGGCATCAGAATGGAATAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp CTGATATTTGCTGACTGGGATGCGAAGCACTGTTTCTaGAGGGTCAATCAATGGCTGACCGAAATAACAGAA +
Preference number: 6 (lower is better)
Translates to: LIFADWDAKHCF*RVNQWLTEITE
Trigger: TTCTGTTATTTCGGTCAGCCATTGATTGACCCTCAAGAAACAGTGCTTCGCATCCCAGTCAGCAAATATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TTCTCTGGGACGATTACAGGGTCTTTAGTAGAGATTTaGCCTTCACTGTTGTCTCTCTTGTGTGCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: FSGTITGSLVEI*PSLLSLLCASF
Trigger: GAAAGAGGCACACAAGAGAGACAACAGTGAAGGCAAAATCTCTACTAAAGACCCTGTAATCGTCCCAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CAA 90 bp AAGATGGTACTTTCTTTTGGCCTTTCACAGTTGTTCTCTTGGTCTTaGCTCTCTGACATCTTGCTAGACTCAGATGATAAGTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: KMVLSFGLSQLFSWS*LSDILLDSDDKWLR
Trigger: CCTCAGCCACTTATCATCTGAGTCTAGCAAGATGTCAGAGAGCAAAGACCAAGAGAACAACTGTGAAAGGCCAAAAGAAAGTACCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp AGTACTTTTCATAGAGTATTTCGAGTTGCTCAGGCGTaGTGGTGGTTCTCAAGCGTTTATCACGGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: STFHRVFRVAQA*WWFSSVYHGVD
Trigger: ATCAACACCGTGATAAACGCTTGAGAACCACCATCACGCCTGAGCAACTCGAAATACTCTATGAAAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp AAATTTGTCATCACAGACCTCTGTGGTGGGTGTGGTTaGTGGTTTTTGCAAAGAGTCAAGAGTTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: KFVITDLCGGCG*WFLQRVKSFGF
Trigger: GAAACCAAAACTCTTGACTCTTTGCAAAAACCAGCAACCACACCCACCACAGAGGTCTGTGATGACAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS GCA 72 bp CTGCACTCTTGGAATCTAACTGGACTTCTTCTTTTGTaGTTTCGGGAGCAGTACTTTTCTCTTCCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: LHSWNLTGLLLL*FREQYFSLPWF
Trigger: AAACCAAGGAAGAGAAAAGTACTGCTCCCGAAAGCACAAAAGAAGAAGTCCAGTTAGATTCCAAGAGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp TTTGTCATCACAGACCTCTGTGGTGGGTGTGGTTGCTaGTTTTTGCAAAGAGTCAAGAGTTTTGGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: FVITDLCGGCGC*FLQRVKSFGFF
Trigger: AAAGAAACCAAAACTCTTGACTCTTTGCAAAAACCAGCAACCACACCCACCACAGAGGTCTGTGATGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp ACTTCAGGGTCTTTAGTAGAGATTTTGCCTTCACTGTaGTCTCTCTTGTGTGCCTCTTTCTCATCATCCTCA +
Preference number: 6 (lower is better)
Translates to: TSGSLVEILPSL*SLLCASFSSSS
Trigger: TGAGGATGATGAGAAAGAGGCACACAAGAGAGACAACAGTGAAGGCAAAATCTCTACTAAAGACCCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026284.13
ENSMUST00000176383.3
CDS CAA 72 bp TTTGAGAACAATTTACCACAGATTCCGCACTCCAGCTaGTCAGAGTTTTCGCCTTCTCCACTTTTACCCTTT +
Preference number: 6 (lower is better)
Translates to: FENNLPQIPHSS*SEFSPSPLLPF
Trigger: AAAGGGTAAAAGTGGAGAAGGCGAAAACTCTGACAAGCTGGAGTGCGGAATCTGTGGTAAATTGTTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp AGAATCCAGCAAGTACTTTTCATAGAGTATTTCGAGTaGCTCAGGCGTGATGGTGGTTCTCAAGCGTTTATC +
Preference number: 6 (lower is better)
Translates to: RIQQVLFIEYFE*LRRDGGSQAFI
Trigger: GATAAACGCTTGAGAACCACCATCACGCCTGAGCAACTCGAAATACTCTATGAAAAGTACTTGCTGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GAAATTTGTCATCACAGACCTCTGTGGTGGGTGTGGTaGCTGGTTTTTGCAAAGAGTCAAGAGTTTTGGTTT +
Preference number: 6 (lower is better)
Translates to: EICHHRPLWWVW*LVFAKSQEFWF
Trigger: AAACCAAAACTCTTGACTCTTTGCAAAAACCAGCAACCACACCCACCACAGAGGTCTGTGATGACAAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TGCTTTTTATTTAATTCTTTGGCATCTAAGTGGGTATCTTTGCTGTaGACTGAAGCTAAGCTCATGGACTCTAACATCCCTTGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: CFLFNSLASKWVSLL*TEAKLMDSNIPWPG
Trigger: CCCTGGCCAAGGGATGTTAGAGTCCATGAGCTTAGCTTCAGTCAACAGCAAAGATACCCACTTAGATGCCAAAGAATTAAATAAAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TATCTGAAAACTCTGCACTCTTGGAATCTAACTGGACTTCTTCTTTaGTGCTTTCGGGAGCAGTACTTTTCTCTTCCTTGGTTTCCGAAG +
Preference number: 6 (lower is better)
Translates to: YLKTLHSWNLTGLLL*CFREQYFSLPWFPK
Trigger: CTTCGGAAACCAAGGAAGAGAAAAGTACTGCTCCCGAAAGCACAAAAGAAGAAGTCCAGTTAGATTCCAAGAGTGCAGAGTTTTCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 90 bp TTCTTGAGGGTCAATCAATGGCTGACCGAAATAACAGAAGGACTTTaGATGGTTTACTGTGGCATCTTCGTCAGTAAACATCATCTGGCA +
Preference number: 6 (lower is better)
Translates to: FLRVNQWLTEITEGL*MVYCGIFVSKHHLA
Trigger: TGCCAGATGATGTTTACTGACGAAGATGCCACAGTAAACCATCAAAAGTCCTTCTGTTATTTCGGTCAGCCATTGATTGACCCTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TTAATAGATGAGGTCTCATCAAAGTCAGTTTTACTCTaGTCATACCCAGCATCAGCCGAAGGGGCATTTAGA +
Preference number: 6 (lower is better)
Translates to: LIDEVSSKSVLL*SYPASAEGAFR
Trigger: TCTAAATGCCCCTTCGGCTGATGCTGGGTATGATCAGAGTAAAACTGACTTTGATGAGACCTCATCTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp CTTTCTTTTGGCCTTTCACAGTTGTTCTCTTGGTCTTaGCTCTCTGACATCTTGCTAGACTCAGATGATAAG +
Preference number: 6 (lower is better)
Translates to: LSFGLSQLFSWS*LSDILLDSDDK
Trigger: CTTATCATCTGAGTCTAGCAAGATGTCAGAGAGCAAAGACCAAGAGAACAACTGTGAAAGGCCAAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GGACAAAATTTATTATCCTCTGTAGGTTTTGACCTTTaGGTTCCTGTGTTGTCTTCTTTGGCCAGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: GQNLLSSVGFDL*VPVLSSLASRS
Trigger: ACTCCTGCTGGCCAAAGAAGACAACACAGGAACCAAAAGGTCAAAACCTACAGAGGATAATAAATTTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp ATTACAGGGTCTTTAGTAGAGATTTTGCCTTCACTGTaGTCTCTCTTGTGTGCCTCTTTCTCATCATCCTCA +
Preference number: 6 (lower is better)
Translates to: ITGSLVEILPSL*SLLCASFSSSS
Trigger: TGAGGATGATGAGAAAGAGGCACACAAGAGAGACAACAGTGAAGGCAAAATCTCTACTAAAGACCCTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175866.8
CDS CAA 90 bp TCGTTCCTTAAAGAGTGTATTTCGAAACCAGTGTTTGATGACTTTTaGAGAGAGGCCAGATTTCTCAGCCATTTCTTGGATCTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SFLKECISKPVFDDF*REARFLSHFLDLFF
Trigger: GAAGAACAGATCCAAGAAATGGCTGAGAAATCTGGCCTCTCTCAAAAAGTCATCAAACACTGGTTTCGAAATACACTCTTTAAGGAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TTAATTCTTTGGCATCTAAGTGGGTATCTTTGCTGTTaGCTGAAGCTAAGCTCATGGACTCTAACATCCCTT +
Preference number: 6 (lower is better)
Translates to: LILWHLSGYLCC*LKLSSWTLTSL
Trigger: AAGGGATGTTAGAGTCCATGAGCTTAGCTTCAGTCAACAGCAAAGATACCCACTTAGATGCCAAAGAATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TCCTGTGGTTGCATCACTGATGGCCGTATTAATAGATaGGGTCTCATCAAAGTCAGTTTTACTCTGATCATA +
Preference number: 6 (lower is better)
Translates to: SCGCITDGRINR*GLIKVSFTLII
Trigger: TATGATCAGAGTAAAACTGACTTTGATGAGACCTCATCTATTAATACGGCCATCAGTGATGCAACCACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TTTAATTCTTTGGCATCTAAGTGGGTATCTTTGCTGTaGACTGAAGCTAAGCTCATGGACTCTAACATCCCT +
Preference number: 6 (lower is better)
Translates to: FNSLASKWVSLL*TEAKLMDSNIP
Trigger: AGGGATGTTAGAGTCCATGAGCTTAGCTTCAGTCAACAGCAAAGATACCCACTTAGATGCCAAAGAATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GTCAATCAATGGCTGACCGAAATAACAGAAGGACTTTaGATGGTTTACTGTGGCATCTTCGTCAGTAAACAT +
Preference number: 6 (lower is better)
Translates to: VNQWLTEITEGL*MVYCGIFVSKH
Trigger: ATGTTTACTGACGAAGATGCCACAGTAAACCATCAAAAGTCCTTCTGTTATTTCGGTCAGCCATTGATTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CCA 72 bp GAGAACAGTCGACAGCTGTTCTATTTCATCGTCTTTTaGATAAGCATTTGTGTCGAAAAAGTCTTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: ENSRQLFYFIVF*ISICVEKVLKN
Trigger: GTTCTTCAAGACTTTTTCGACACAAATGCTTATCCAAAAGACGATGAAATAGAACAGCTGTCGACTGTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp GAGGGTACACTCTGGCTTAGTACCATCTGTTCCACTTaGATTGATCATGAACGGCTTTCCTATATTAATTTT +
Preference number: 6 (lower is better)
Translates to: EGTLWLSTICST*IDHERLSYINF
Trigger: AAAATTAATATAGGAAAGCCGTTCATGATCAATCAAAGTGGAACAGATGGTACTAAGCCAGAGTGTACCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp AGGGTACACTCTGGCTTAGTACCATCTGTTCCACTTTaGTTGATCATGAACGGCTTTCCTATATTAATTTTA +
Preference number: 6 (lower is better)
Translates to: RVHSGLVPSVPL*LIMNGFPILIL
Trigger: TAAAATTAATATAGGAAAGCCGTTCATGATCAATCAAAGTGGAACAGATGGTACTAAGCCAGAGTGTACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS TCA 72 bp TTAAGAGAGGGAAATCTTTATTACCAATACTATCTGTaGGTTCACCTAATACTTCCTCGTCATCGAGTTCAT +
Preference number: 6 (lower is better)
Translates to: LREGNLYYQYYL*VHLILPRHRVH
Trigger: ATGAACTCGATGACGAGGAAGTATTAGGTGAACTCACAGATAGTATTGGTAATAAAGATTTCCCTCTCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3
CDS CAA 72 bp TTTTTATTTAATTCTTTGGCATCTAAGTGGGTATCTTaGCTGTTGACTGAAGCTAAGCTCATGGACTCTAAC +
Preference number: 6 (lower is better)
Translates to: FLFNSLASKWVS*LLTEAKLMDSN
Trigger: GTTAGAGTCCATGAGCTTAGCTTCAGTCAACAGCAAAGATACCCACTTAGATGCCAAAGAATTAAATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026284.13
ENSMUST00000175866.8
ENSMUST00000176383.3