RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFHX3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038872

Ensembl transcript IDs: ENSMUST00000043896.10, ENSMUST00000220518.2

Found 1358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACACACACACACACACACACATATGTGTGTGTGTGGGTGGGTGGTaGGGCTGGAGAGGAACTCGTTCATTAACGCACTTCCGGGTTGGG +
Preference number: 1 (lower is better)
Translates to: YTHTHTHICVCVGGW*GWRGTRSLTHFRVG
Trigger: CCCAACCCGGAAGTGCGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATATGTGTGTGTGTGTGTGTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 90 bp GTCCATGAACATCAAGTGCACTGGCTTGGGTCACTGCTCCTTTCCTaGAACTTCCTGCCACGCCTGATAAACTCAGGTTTCAACGCGTGC +
Preference number: 1 (lower is better)
Translates to: VHEHQVHWLGSLLLS*NFLPRLINSGFNAC
Trigger: GCACGCGTTGAAACCTGAGTTTATCAGGCGTGGCAGGAAGTTGCAGGAAAGGAGCAGTGACCCAAGCCAGTGCACTTGATGTTCATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 90 bp TGGAATGCTCCAGTCTTTTGCAAAGTCGATGAATGGCTTCCGCACTaGGGAAGAAGCCCAGAAGGTGGCCAACGGAACCTGGATTCACAG +
Preference number: 1 (lower is better)
Translates to: WNAPVFCKVDEWLPH*GRSPEGGQRNLDSQ
Trigger: CTGTGAATCCAGGTTCCGTTGGCCACCTTCTGGGCTTCTTCCCCAGTGCGGAAGCCATTCATCGACTTTGCAAAAGACTGGAGCATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 90 bp AGTTTCAGATCTTGGAATGCTCCAGTCTTTTGCAAAGTCGATGAATaGCTTCCGCACTGGGGAAGAAGCCCAGAAGGTGGCCAACGGAAC +
Preference number: 1 (lower is better)
Translates to: SFRSWNAPVFCKVDE*LPHWGRSPEGGQRN
Trigger: GTTCCGTTGGCCACCTTCTGGGCTTCTTCCCCAGTGCGGAAGCCATTCATCGACTTTGCAAAAGACTGGAGCATTCCAAGATCTGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 90 bp CAACCTTACCTTATTGTTGCCAAAATACACTCGTGGGTCAAGGCATaGCACAGTGAAACACTGACAGTCACTGCCCCACAGAGGGAGGAT +
Preference number: 1 (lower is better)
Translates to: QPYLIVAKIHSWVKA*HSETLTVTAPQRED
Trigger: ATCCTCCCTCTGTGGGGCAGTGACTGTCAGTGTTTCACTGTGCCATGCCTTGACCCACGAGTGTATTTTGGCAACAATAAGGTAAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 90 bp GGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTaGACTCGGGATCACTCGCTGCTCAGACTGCCTAAGAGGACAAAA +
Preference number: 1 (lower is better)
Translates to: GLLLCSLYIAICFVG*TRDHSLLRLPKRTK
Trigger: TTTTGTCCTCTTAGGCAGTCTGAGCAGCGAGTGATCCCGAGTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 90 bp GTAAACATATGCCTTGGAAATGGCTACAGACCACGGCCACTTGTCTaGCTTCTGGTTTTCACCACCACTGACTGCTTCACTATTTCTGGG +
Preference number: 1 (lower is better)
Translates to: VNICLGNGYRPRPLV*LLVFTTTDCFTISG
Trigger: CCCAGAAATAGTGAAGCAGTCAGTGGTGGTGAAAACCAGAAGGCAGACAAGTGGCCGTGGTCTGTAGCCATTTCCAAGGCATATGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 90 bp AGCTATTCTACCCAACCTTACCTTATTGTTGCCAAAATACACTCGTaGGTCAAGGCATGGCACAGTGAAACACTGACAGTCACTGCCCCA +
Preference number: 1 (lower is better)
Translates to: SYSTQPYLIVAKIHS*VKAWHSETLTVTAP
Trigger: TGGGGCAGTGACTGTCAGTGTTTCACTGTGCCATGCCTTGACCCACGAGTGTATTTTGGCAACAATAAGGTAAGGTTGGGTAGAATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 90 bp TCCTGCAACTTCCTGCCACGCCTGATAAACTCAGGTTTCAACGCGTaGCGTCTGTTTTACTTTGCTCTCTTTCAATTGTGTAAAACTTTG +
Preference number: 1 (lower is better)
Translates to: SCNFLPRLINSGFNA*RLFYFALFQLCKTL
Trigger: CAAAGTTTTACACAATTGAAAGAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGGCAGGAAGTTGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 90 bp AAAGAAGTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATaGTCTACAACTCAACGACTCACTCCAACAGCAGACGGGAGTGAA +
Preference number: 1 (lower is better)
Translates to: KEVPIEELTFKVELR*STTQRLTPTADGSE
Trigger: TTCACTCCCGTCTGCTGTTGGAGTGAGTCGTTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCACTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 90 bp TCATTAACAACTGCCTCTCTGCTTGCAGAAGAAGCCGTAACAACCTaGGAACCGTTTTGTGTTACTCTTTCTTTTATTAAACTAAGTCTT +
Preference number: 1 (lower is better)
Translates to: SLTTASLLAEEAVTT*EPFCVTLSFIKLSL
Trigger: AAGACTTAGTTTAATAAAAGAAAGAGTAACACAAAACGGTTCCCAGGTTGTTACGGCTTCTTCTGCAAGCAGAGAGGCAGTTGTTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 90 bp GACCACACAAAAGCTAAATGTACAAAGCTTTTAAGTCTACCATACTaGTTCAGGTCATTTCCAATGAAGCAATCTACTCAACACCAAAAA +
Preference number: 1 (lower is better)
Translates to: DHTKAKCTKLLSLPY*FRSFPMKQSTQHQK
Trigger: TTTTTGGTGTTGAGTAGATTGCTTCATTGGAAATGACCTGAAGCAGTATGGTAGACTTAAAAGCTTTGTACATTTAGCTTTTGTGTGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGATCCCAAGCCGCCTCTaGGGAATACTGATGGGCAGA +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTIPSRL*GILMGR
Trigger: TCTGCCCATCAGTATTCCTCAGAGGCGGCTTGGGAT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 90 bp CGCGCACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTaGTTGGCTGCACTCGGGATCACTCGCTGCTCAGACTGCCTAAGA +
Preference number: 2 (lower is better)
Translates to: RARACFFALCTLLSV*LAALGITRCSDCLR
Trigger: TCTTAGGCAGTCTGAGCAGCGAGTGATCCCGAGTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGCCGGGCTCCTCTGTaGTATCAACGTGGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCRAPL*YQRGAV
Trigger: AACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 90 bp GCACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTaGGCTGCACTCGGGATCACTCGCTGCTCAGACTGCCTAAGAGGA +
Preference number: 2 (lower is better)
Translates to: ARACFFALCTLLSVL*AALGITRCSDCLRG
Trigger: TCCTCTTAGGCAGTCTGAGCAGCGAGTGATCCCGAGTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGCTTTCCCATACAGTaGATGCCGGGCTCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: PRLINSGFNACRLFYFALCFPIQ*MPGSSV
Trigger: CACAGAGGAGCCCGGCATGCACTGTATGGGAAAGCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCGGGATCACTCGCTaGTCAGACTGCCTAAGAGGA +
Preference number: 2 (lower is better)
Translates to: PRLINSGFNACRLFYFALLGITR*SDCLRG
Trigger: TCCTCTTAGGCAGTCTGAGCAGCGAGTGATCCCGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGATCTGTTTTGTTGGCTaGACTCGGGATCACTCGCTG +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTICFVG*TRDHSL
Trigger: CAGCGAGTGATCCCGAGTGCAGCCAACAAAACAGAT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGCGGCCACTTTAAGTaGGAAATTAGAGGATGGGAG +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGGHFK*EIRGWE
Trigger: CTCCCATCCTCTAATTTCCCACTTAAAGTGGCCGCC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCCAAAATACACTCGTaGGTCAAGGCATGGCACAGT +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTAKIHS*VKAWHS
Trigger: ACTGTGCCATGCCTTGACCCACGAGTGTATTTTGGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 90 bp AGGACTACGCACATTAACGTAAACACGCGTGCCTCGCGCACGGGCTaGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: RTTHINVNTRASRTG*LLCSLYIAICFVGC
Trigger: GCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTGCGCGAGGCACGCGTGTTTACGTTAATGTGCGTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCGAAGGGTGACCGATTaGCCTGAGAATAAAAAGACA +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRRVTD*PENKKT
Trigger: TGTCTTTTTATTCTCAGGTCAATCGGTCACCCTTCG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGGGACTTCACTCTTTaGGGGCAAGGAAGATTGTGT +
Preference number: 2 (lower is better)
Translates to: PRLINSGFNACRLFYFALGDFTL*GQGRLC
Trigger: ACACAATCTTCCTTGCCCCCAAAGAGTGAAGTCCCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCATATGCCTTGGAAATaGCTACAGACCACGGCCACT +
Preference number: 2 (lower is better)
Translates to: PRLINSGFNACRLFYFALHMPWK*LQTTAT
Trigger: AGTGGCCGTGGTCTGTAGCCATTTCCAAGGCATATG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCAGGTCATTTCCAATaGAGCAATCTACTCAACACC +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSGHFQ*SNLLNT
Trigger: GGTGTTGAGTAGATTGCTTCATTGGAAATGACCTGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGCCGGGCTCCTCTGTaGTATCAACGTGGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPCRAPL*YQRGAV
Trigger: AACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAACTGCCTCTCTGCTTaGAGAAGAAGCCGTAACAAC +
Preference number: 2 (lower is better)
Translates to: PRLINSGFNACRLFYFALNCLSA*RRSRNN
Trigger: GTTGTTACGGCTTCTTCTGCAAGCAGAGAGGCAGTT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGCTATCTGTTTTGTTaGCTGCACTCGGGATCACTC +
Preference number: 2 (lower is better)
Translates to: PRLINSGFNACRLFYFALCYLFC*LHSGSL
Trigger: GAGTGATCCCGAGTGCAGCCAACAAAACAGATAGCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAAAACTGTAACAAGGTaGAGTGCTTTCCCATACAGT +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTKTVTR*SAFPYS
Trigger: ACTGTATGGGAAAGCACTCCACCTTGTTACAGTTTT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCGAAGGGTGACCGATTaGCCTGAGAATAAAAAGACA +
Preference number: 2 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRRVTD*PENKKT
Trigger: TGTCTTTTTATTCTCAGGTCAATCGGTCACCCTTCG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGATCGCTAGAATCCTCTaGAATCCTTTCTTTAGGTTT +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTIARIL*NPFFRF
Trigger: AAACCTAAAGAAAGGATTTCAGAGGATTCTAGCGAT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCAAGAAAAGAGCATTTaGAGTTTCCACAGAACAAGA +
Preference number: 2 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTQEKSI*SFHRTR
Trigger: TCTTGTTCTGTGGAAACTTCAAATGCTCTTTTCTTG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGTAACAAGGTGGAGTaGTTTCCCATACAGTGCATG +
Preference number: 2 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCNKVE*FPIQCM
Trigger: CATGCACTGTATGGGAAAGCACTCCACCTTGTTACA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTCAGGTCATTTCCAATaGAGCAATCTACTCAACACC +
Preference number: 2 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHSGHFQ*SNLLNT
Trigger: GGTGTTGAGTAGATTGCTTCATTGGAAATGACCTGA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGGGAAATTAGAGGATaGGAGTTGGAGTTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPWEIRG*ELELGV
Trigger: CACCCCCAACTCCAACTCCCATCCTCTAATTTCCCA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCAAAATACACTCGTaGGTCAAGGCATGGCACAGT +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPAKIHS*VKAWHS
Trigger: ACTGTGCCATGCCTTGACCCACGAGTGTATTTTGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGCTTTCCCATACAGTaGATGCCGGGCTCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCFPIQ*MPGSSV
Trigger: CACAGAGGAGCCCGGCATGCACTGTATGGGAAAGCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTTTTGCAAAGTCGATaGATGGCTTCCGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLLQSR*MASALG
Trigger: CCCCAGTGCGGAAGCCATTCATCGACTTTGCAAAAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACAAGGCATGGCACAGTaGAACACTGACAGTCACTGC +
Preference number: 2 (lower is better)
Translates to: VPIEELTFKVELRWSTTQQGMAQ*NTDSHC
Trigger: GCAGTGACTGTCAGTGTTTCACTGTGCCATGCCTTG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTCCCATACAGTGCATaGCGGGCTCCTCTGTGCTAT +
Preference number: 2 (lower is better)
Translates to: VPIEELTFKVELRWSTTQFPYSA*RAPLCY
Trigger: ATAGCACAGAGGAGCCCGGCATGCACTGTATGGGAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAACAAACAAAACCATTaGGGAAGGGCTGGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPNKQNH*GRAGRV
Trigger: AACTCTGCCAGCCCTTCCCCAATGGTTTTGTTTGTT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGAGAGAGACGAAGTTaGATTGAGGGACAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGERRS*IEGQSG
Trigger: CCCACTTTGTCCCTCAATTCAACTTCGTCTCTCTCC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTTTTAGCAAGCCATTaGTATCTGAGTGCTAAGATA +
Preference number: 2 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHFLASH*YLSAKI
Trigger: TATCTTAGCACTCAGATACCAATGGCTTGCTAAAAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGGGAAATTAGAGGATaGGAGTTGGAGTTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRWEIRG*ELELGV
Trigger: CACCCCCAACTCCAACTCCCATCCTCTAATTTCCCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACAAGACAACATCAAATaGGGAGATGTCGCTGGACCA +
Preference number: 2 (lower is better)
Translates to: VPIEELTFKVELRWSTTQQDNIK*GDVAGP
Trigger: TGGTCCAGCGACATCTCCTCATTTGATGTTGTCTTG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGAGACGAAGTTGAATTaGGGGACAAAGTGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRETKLN*GTKWEK
Trigger: CTTCTCCCACTTTGTCCCTCAATTCAACTTCGTCTC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGACCTAGCAGAATTTaGCAGGTAAAGCTAGTGTTA +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRPSRI*QVKLVL
Trigger: TAACACTAGCTTTACCTGTCAAATTCTGCTAGGTCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAAGATTGTGTCTGTTaGTGTTTGGCTATGAAAGTG +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPEDCVC*CLAMKV
Trigger: CACTTTCATAGCCAAACACCAACAGACACAATCTTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 90 bp GATAAAGAAAGGATGTATGAAATAACTCCAATTCTGACAGGTATCTaGGTGCCGTTGTGCCAAATAGTATCTAGCACCAAGCCACATCAT +
Preference number: 2 (lower is better)
Translates to: DKERMYEITPILTGI*VPLCQIVSSTKPHH
Trigger: ATGATGTGGCTTGGTGCTAGATACTATTTGGCACAACGGCACCAAGATACCTGTCAGAATTGGAGTTATTTCATACATCCTTTCTTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 90 bp CCTGAAGAAAGTAAACAAACAAAACAAAACAACCTAGTCAAAGCTTaGTTTCACAGTGGGCAGTATCTCAGCGCCAACAAACAACCAACT +
Preference number: 2 (lower is better)
Translates to: PEESKQTKQNNLVKA*FHSGQYLSANKQPT
Trigger: AGTTGGTTGTTTGTTGGCGCTGAGATACTGCCCACTGTGAAACAAAGCTTTGACTAGGTTGTTTTGTTTTGTTTGTTTACTTTCTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACAAGAAAAGAGCATTTaGAGTTTCCACAGAACAAGA +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPQEKSI*SFHRTR
Trigger: TCTTGTTCTGTGGAAACTTCAAATGCTCTTTTCTTG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGTAACAAGGTGGAGTaGTTTCCCATACAGTGCATG +
Preference number: 2 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCNKVE*FPIQCM
Trigger: CATGCACTGTATGGGAAAGCACTCCACCTTGTTACA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATTAAGTCTACCATACTaGTTCAGGTCATTTCCAATG +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLSLPY*FRSFPM
Trigger: CATTGGAAATGACCTGAAGCAGTATGGTAGACTTAA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAACAAACAAAACCATTaGGGAAGGGCTGGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: VPIEELTFKVELRWSTTQNKQNH*GRAGRV
Trigger: AACTCTGCCAGCCCTTCCCCAATGGTTTTGTTTGTT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACTGCTTCACTATTTCTaGGTTAGTGCTGAGAATTTT +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLLHYF*VSAENF
Trigger: AAAATTCTCAGCACTAACCCAGAAATAGTGAAGCAG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATTTTTAGCAAGCCATTaGTATCTGAGTGCTAAGATA +
Preference number: 2 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPFLASH*YLSAKI
Trigger: TATCTTAGCACTCAGATACCAATGGCTTGCTAAAAA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTGCTCTCTGTACATTaGTATCTGTTTTGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLLSVH*YLFCWL
Trigger: CAGCCAACAAAACAGATAGCAATGTACAGAGAGCAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp CCAGTCTTTTGCAAAGTCGATGAATGGCTTCCGCACTaGGGAAGAAGCCCAGAAGGTGGCCAACGGAACCTG +
Preference number: 3 (lower is better)
Translates to: PVFCKVDEWLPH*GRSPEGGQRNL
Trigger: CAGGTTCCGTTGGCCACCTTCTGGGCTTCTTCCCCAGTGCGGAAGCCATTCATCGACTTTGCAAAAGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR TCA 72 bp TGCCAAAATACACTCGTGGGTCAAGGCATGGCACAGTaGAACACTGACAGTCACTGCCCCACAGAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: CQNTLVGQGMAQ*NTDSHCPTEGG
Trigger: TCCTCCCTCTGTGGGGCAGTGACTGTCAGTGTTTCACTGTGCCATGCCTTGACCCACGAGTGTATTTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 72 bp ACTGTAACAAGGTGGAGTGCTTTCCCATACAGTGCATaGCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: TVTRWSAFPYSA*RAPLCYQRGAV
Trigger: AACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGGAAAGCACTCCACCTTGTTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTACAAAGAAACGAGGTaGGGGGTGGGGAGGGTAGAA +
Preference number: 3 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTYKETR*GVGRVE
Trigger: TTCTACCCTCCCCACCCCCAACCTCGTTTCTTTGTA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR TCA 72 bp TACACTCGTGGGTCAAGGCATGGCACAGTGAAACACTaGCAGTCACTGCCCCACAGAGGGAGGATGATTGTA +
Preference number: 3 (lower is better)
Translates to: YTRGSRHGTVKH*QSLPHRGRMIV
Trigger: TACAATCATCCTCCCTCTGTGGGGCAGTGACTGTCAGTGTTTCACTGTGCCATGCCTTGACCCACGAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 72 bp TGCCTTGGAAATGGCTACAGACCACGGCCACTTGTCTaGCTTCTGGTTTTCACCACCACTGACTGCTTCACT +
Preference number: 3 (lower is better)
Translates to: CLGNGYRPRPLV*LLVFTTTDCFT
Trigger: AGTGAAGCAGTCAGTGGTGGTGAAAACCAGAAGGCAGACAAGTGGCCGTGGTCTGTAGCCATTTCCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 72 bp CATCAAGTGCACTGGCTTGGGTCACTGCTCCTTTCCTaGAACTTCCTGCCACGCCTGATAAACTCAGGTTTC +
Preference number: 3 (lower is better)
Translates to: HQVHWLGSLLLS*NFLPRLINSGF
Trigger: GAAACCTGAGTTTATCAGGCGTGGCAGGAAGTTGCAGGAAAGGAGCAGTGACCCAAGCCAGTGCACTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp TCTTGGAATGCTCCAGTCTTTTGCAAAGTCGATGAATaGCTTCCGCACTGGGGAAGAAGCCCAGAAGGTGGC +
Preference number: 3 (lower is better)
Translates to: SWNAPVFCKVDE*LPHWGRSPEGG
Trigger: GCCACCTTCTGGGCTTCTTCCCCAGTGCGGAAGCCATTCATCGACTTTGCAAAAGACTGGAGCATTCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGTGTCTGTTGGTGTTaGGCTATGAAAGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCVCWC*AMKVRQ
Trigger: CTGCCTCACTTTCATAGCCAAACACCAACAGACACA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCACAGACCACGGCCACTaGTCTGCCTTCTGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: PRLINSGFNACRLFYFALTDHGH*SAFWFS
Trigger: TGAAAACCAGAAGGCAGACAAGTGGCCGTGGTCTGT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR TCA 72 bp CTCACTCCAACAGCAGACGGGAGTGAACTCCCCGAATaGGATCAGTCTAAGCAATTGAGCACGGTAGTAAAC +
Preference number: 3 (lower is better)
Translates to: LTPTADGSELPE*DQSKQLSTVVN
Trigger: GTTTACTACCGTGCTCAATTGCTTAGACTGATCTCATTCGGGGAGTTCACTCCCGTCTGCTGTTGGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 72 bp GGACAAAGTGGGAGAAGCTGGGGCGGAGCAACAGATTaGAATCTATCCACTAGGGATGAACAAGACAACATC +
Preference number: 3 (lower is better)
Translates to: GQSGRSWGGATD*NLSTRDEQDNI
Trigger: GATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGCTTCTCCCACTTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp CTTATTGTTGCCAAAATACACTCGTGGGTCAAGGCATaGCACAGTGAAACACTGACAGTCACTGCCCCACAG +
Preference number: 3 (lower is better)
Translates to: LIVAKIHSWVKA*HSETLTVTAPQ
Trigger: CTGTGGGGCAGTGACTGTCAGTGTTTCACTGTGCCATGCCTTGACCCACGAGTGTATTTTGGCAACAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp GCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATaGCTACAGACCACGGCCACTTGTCTGCCTTCTGGT +
Preference number: 3 (lower is better)
Translates to: AIEHGSKHMPWK*LQTTATCLPSG
Trigger: ACCAGAAGGCAGACAAGTGGCCGTGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCACGGGCTTGCTTCTTaGCTCTCTGTACATTGCTAT +
Preference number: 3 (lower is better)
Translates to: PRLINSGFNACRLFYFALHGLAS*LSVHCY
Trigger: ATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAACCTGGGAACCGTTTaGTGTTACTCTTTCTTTTAT +
Preference number: 3 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTNLGTV*CYSFFY
Trigger: ATAAAAGAAAGAGTAACACAAAACGGTTCCCAGGTT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGAAGATTGTGTCTGTaGGTGTTTGGCTATGAAAGT +
Preference number: 3 (lower is better)
Translates to: PRLINSGFNACRLFYFALGRLCL*VFGYES
Trigger: ACTTTCATAGCCAAACACCAACAGACACAATCTTCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCCCAACCTTACCTTATaGTTGCCAAAATACACTCGT +
Preference number: 3 (lower is better)
Translates to: PRLINSGFNACRLFYFALPNLTL*LPKYTR
Trigger: ACGAGTGTATTTTGGCAACAATAAGGTAAGGTTGGG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 72 bp TTCCTGCCACGCCTGATAAACTCAGGTTTCAACGCGTaGCGTCTGTTTTACTTTGCTCTCTTTCAATTGTGT +
Preference number: 3 (lower is better)
Translates to: FLPRLINSGFNA*RLFYFALFQLC
Trigger: ACACAATTGAAAGAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGTGTCTGTTGGTGTTaGGCTATGAAAGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPCVCWC*AMKVRQ
Trigger: CTGCCTCACTTTCATAGCCAAACACCAACAGACACA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTTCTCCCCTGGAAATaGGCTTCAGCAGAAAAGCTA +
Preference number: 3 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELLPWK*ASAEKL
Trigger: TAGCTTTTCTGCTGAAGCCAATTTCCAGGGGAGAAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGAGACGAAGTTGAATaGAGGGACAAAGTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRDEVE*RDKVGE
Trigger: TTCTCCCACTTTGTCCCTCAATTCAACTTCGTCTCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATGGGGGCAAGGAAGATaGTGTCTGTTGGTGTTTGGC +
Preference number: 3 (lower is better)
Translates to: VPIEELTFKVELRWSTTQWGQGR*CLLVFG
Trigger: GCCAAACACCAACAGACACAATCTTCCTTGCCCCCA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATACAAAGAAACGAGGTaGGGGGTGGGGAGGGTAGAA +
Preference number: 3 (lower is better)
Translates to: VPIEELTFKVELRWSTTQYKETR*GVGRVE
Trigger: TTCTACCCTCCCCACCCCCAACCTCGTTTCTTTGTA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR GCA 72 bp ATGTGTCTTTTGGTATCTGGAATTGTCATTAACAACTaGCTCTCTGCTTGCAGAAGAAGCCGTAACAACCTG +
Preference number: 3 (lower is better)
Translates to: MCLLVSGIVINN*LSACRRSRNNL
Trigger: CAGGTTGTTACGGCTTCTTCTGCAAGCAGAGAGGCAGTTGTTAATGACAATTCCAGATACCAAAAGACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp GATGATTGTAGCTCAAAACAGAACAAACAAAACCATTaGGGAAGGGCTGGCAGAGTTACAAAGAAACGAGGT +
Preference number: 3 (lower is better)
Translates to: DDCSSKQNKQNH*GRAGRVTKKRG
Trigger: ACCTCGTTTCTTTGTAACTCTGCCAGCCCTTCCCCAATGGTTTTGTTTGTTCTGTTTTGAGCTACAATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGCCAAGGGGTGTGTGTaGAATCATGTTGTCACAGGA +
Preference number: 3 (lower is better)
Translates to: VPIEELTFKVELRWSTTQAKGCV*NHVVTG
Trigger: TCCTGTGACAACATGATTCAACACACACCCCTTGGC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp ACTGCCTCTCTGCTTGCAGAAGAAGCCGTAACAACCTaGGAACCGTTTTGTGTTACTCTTTCTTTTATTAAA +
Preference number: 3 (lower is better)
Translates to: TASLLAEEAVTT*EPFCVTLSFIK
Trigger: TTTAATAAAAGAAAGAGTAACACAAAACGGTTCCCAGGTTGTTACGGCTTCTTCTGCAAGCAGAGAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp CCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATaGTCTACAACTCAACGACTCACTCCAACAGCAGAC +
Preference number: 3 (lower is better)
Translates to: PIEELTFKVELR*STTQRLTPTAD
Trigger: GTCTGCTGTTGGAGTGAGTCGTTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CCA 72 bp AAAACAAAACAACCTAGTCAAAGCTTTGTTTCACAGTaGGCAGTATCTCAGCGCCAACAAACAACCAACTCA +
Preference number: 3 (lower is better)
Translates to: KTKQPSQSFVSQ*AVSQRQQTTNS
Trigger: TGAGTTGGTTGTTTGTTGGCGCTGAGATACTGCCCACTGTGAAACAAAGCTTTGACTAGGTTGTTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTTCTCCCCTGGAAATaGGCTTCAGCAGAAAAGCTA +
Preference number: 3 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLLPWK*ASAEKL
Trigger: TAGCTTTTCTGCTGAAGCCAATTTCCAGGGGAGAAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATTTGCTCTCTGTACATaGCTATCTGTTTTGTTGGCT +
Preference number: 3 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPFALCT*LSVLLA
Trigger: AGCCAACAAAACAGATAGCAATGTACAGAGAGCAAA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGAGACGAAGTTGAATaGAGGGACAAAGTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRDEVE*RDKVGE
Trigger: TTCTCCCACTTTGTCCCTCAATTCAACTTCGTCTCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATCAAGAAAAGAGCATTaGAAGTTTCCACAGAACAAG +
Preference number: 3 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSRKEH*KFPQNK
Trigger: CTTGTTCTGTGGAAACTTCAAATGCTCTTTTCTTGA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCACTGCGGAGGGGGTaGCTGCGGAGGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQALRRG*LRRRLR
Trigger: CCGCAGCCTCCTCCGCAGGCACCCCCTCCGCAGTGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTCCACACCGCTACCTaGGGGGCACTCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLHTAT*GALPDP
Trigger: GGGGTCGGGGAGTGCCCCTCAGGTAGCGGTGTGGAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGTAGCTCTCGCCTCGTaGCAAGCGCGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQVALAS*QARVGL
Trigger: CAGCCCCACCCGCGCTTGGCACGAGGCGAGAGCTAC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATCCGGGAGGCCCTTCTaGAGCCGCTGCAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSGRPF*SRCSLR
Trigger: GCGCAAGCTGCAGCGGCTGCAGAAGGGCCTCCCGGA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGCTGGCTGGGGAGGTaGGGTAGGAAGCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSWLGR*GRKRRR
Trigger: CCGCCTCCGCTTCCTACCGCACCTCCCCAGCCAGCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCCTGCGGAGGAGGCTaGGGTAAGGAAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQACGGG*GKEGAA
Trigger: GGCTGCCCCTTCCTTACCGCAGCCTCCTCCGCAGGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCGGCCCCGGCGCTGTaGCTGAAGACCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTAAPAL*LKTCSP
Trigger: GGGCGAGCAGGTCTTCAGCCACAGCGCCGGGGCCGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCCTGGACTTGCGCCTaGGCCTGGGCGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAWTCA*AWASVW
Trigger: CCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCTGGGCCTGACCCCGTaGGTGTCAGTGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLGLTP*VSVPRW
Trigger: CCAGCGGGGCACTGACACTCACGGGGTCAGGCCCAG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGTTGTGGGGGTGGCTaGGGGGCCATTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGCGGG*GAIAMV
Trigger: CACCATGGCAATGGCCCCTCAGCCACCCCCACAACC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGAAGTCCAGCCTCCTaGCCTCTGCCACGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRSPAS*PLPRWP
Trigger: GGGCCAACGTGGCAGAGGGCAGGAGGCTGGACTTCG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCAGCCGCTGCAGCTTaGGCAGGCTCTCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAAAAA*AGSHCA
Trigger: AGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTTATTGTCCGGGCTaGTGGTGGGCTCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAYCPG*WWAPAG
Trigger: GCCAGCCGGAGCCCACCAGCAGCCCGGACAATAAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGACCGGTGGCTGCGGCTaGTGGGGTTGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTTGGCG*WGCGGG
Trigger: GCCACCCCCACAACCCCAGCAGCCGCAGCCACCGGT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAACTTGCGCCTGGGCCTaGGCGAGTGTCTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQTCAWA*ASVWAC
Trigger: GCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGGCCATTGCCATGGTaGCTTGTGCTGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGPLPW*LVLGSG
Trigger: CCCCGACCCCAGCACAAGCCACCATGGCAATGGCCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGCAGGGTCTTTGTCTaGGGAAGCAGGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGRVFV*GSRPLG
Trigger: CCCCAGGGGCCTGCTTCCCCAGACAAAGACCCTGCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATCGCCGAAGCCCGCCTaGCACTTGCGGCAGACCAAC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSPKPA*HLRQTN
Trigger: GTTGGTCTGCCGCAAGTGCCAGGCGGGCTTCGGCGA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGACTTCCTGGAGGCGTaGGGGGAAGCGGACGAGGAC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQDFLEA*GEADED
Trigger: GTCCTCGTCCGCTTCCCCCCACGCCTCCAGGAAGTC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCCGCCCAGCGAGCGTaGGGAGCCCAGGACCGTGTC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTAAQRA*GAQDRV
Trigger: GACACGGTCCTGGGCTCCTCACGCTCGCTGGGCGGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGCGGGCAGTGGGGCTaGGATGGTTGCTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGGQWG*DGCCSR
Trigger: GCGGCTACAGCAACCATCTCAGCCCCACTGCCCGCC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTCCACGCAGTCAGGTaGCACGCTGTGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLHAVR*HAVEVG
Trigger: ACCCACCTCCACAGCGTGGCACCTGACTGCGTGGAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGGGCGGCCTGTTGCTaGAGCTCCTGCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRAACC*SSCCRC
Trigger: ACACCTGCAGCAGGAGCTGCAGCAACAGGCCGCCCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGCGGAGGGGGTGCCTaGGGAGGAGGCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCGGGA*GGGCGK
Trigger: CTTACCGCAGCCTCCTCCGCAGGCACCCCCTCCGCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGCTGCACCGGTGGCTaGGGCTGCTGGGGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCCTGG*GCWGCG
Trigger: CCCACAACCCCAGCAGCCGCAGCCACCGGTGCAGCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGGGATCTGTTGGGCTaGTGGCGGCGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRDLLG*WRRRRL
Trigger: CAGCCTCCGCCGCCGCCAGCAGCCCAACAGATCCCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCTCGCCCTCCTCGCTaGTGTCGCTGGCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPRPPR*CRWRSP
Trigger: AGGAGAGCGCCAGCGACACCAGCGAGGAGGGCGAGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCGGCCCCGGCGCTGTaGCTGAAGACCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTAAPAL*LKTCSP
Trigger: GGGCGAGCAGGTCTTCAGCCACAGCGCCGGGGCCGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACACCGGGGCTCGCACTaGCCTTTTCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQHRGSH*PFPPAS
Trigger: GGAAGCTGGAGGAAAAGGCCAGTGCGAGCCCCGGTG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTCCACACCGCTACCTaGGGGGCACTCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLHTAT*GALPDP
Trigger: GGGGTCGGGGAGTGCCCCTCAGGTAGCGGTGTGGAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGGGCCTGACCCCGTaGGTGTCAGTGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLGLTP*VSVPRW
Trigger: CCAGCGGGGCACTGACACTCACGGGGTCAGGCCCAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGGGTCCGCGAGGCTTaGGGTTTCACTGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGVREA*GFTVVH
Trigger: GTGGACTACAGTGAAACCTCAAGCCTCGCGGACCCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGGCTGTCGTTTGAGTaGGCGGCAGACTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGLSFE*AADCEV
Trigger: TACCTCGCAGTCTGCCGCTCACTCAAACGACAGCCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCTGCGGGTACACGGGTaGAGCACACGAAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLRVHG*STRRVP
Trigger: GGGGACCCTTCGTGTGCTGCACCCGTGTACCCGCAG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACAAGGTCCTTTTTGCTaGTACCACCTGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQQGPFC*YHLRGP
Trigger: GGGCCCCCGCAGGTGGTAGCAGCAAAAAGGACCTTG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGTCCTCCGAGAGGCTaGGCTCCACGTTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRPPRG*APRSCA
Trigger: TGCACATGAACGTGGAGCGCAGCCTCTCGGAGGACG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGCGCAGGCTCTCACTaGGCTGGTGCTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCAGSH*AGASWS
Trigger: GCTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCTTATTGTCCGGGCTaGTGGTGGGCTCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTAYCPG*WWAPAG
Trigger: GCCAGCCGGAGCCCACCAGCAGCCCGGACAATAAGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGGTGTGCCTGGACTTaGGCCTGGGCCTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRCAWT*AWAWAS
Trigger: ACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACACCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGCTGCAGCTCCTGCTaGAGGTGTGCCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCCSSC*RCAWTC
Trigger: GCAAGTCCAGGCACACCTGCAGCAGGAGCTGCAGCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTCTGCTGCTGCTGCTaGTGCAGGATCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLCCCC*CRICWW
Trigger: CCACCAGCAGATCCTGCAGCAGCAGCAGCAGCAGAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCACGCGGCCCCGCTCTaGGCCAGCTGGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHHAAPL*ASWLRL
Trigger: GAGCCTGAGCCAGCTGGCCCAGAGCGGGGCCGCGTG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGGATGGTGAAGATCTaGCCCAGGTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRMVKI*PRSSSS
Trigger: GGAGGACGAGGACCTGGGCCAGATCTTCACCATCCG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCTGACACGGGCAGCTaGGGCCTCTTGGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSDTGS*GLLACT
Trigger: GGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGTCTTCAGCCAGGGTaGGGTCTCCCATCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGLQPG*GLPSPR
Trigger: TCTTGGCGATGGGAGACCCCACCCTGGCTGAAGACC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCGACGCGGGGATGGCTaGCGCGGAAGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRRGDG*RGSWLG
Trigger: CCCCAGCCAGCTTCCGCGCCAGCCATCCCCGCGTCG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGTTGCTGTAGCCGCTaGAGGGGCCTCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGCCSR*RGLSFL
Trigger: GAGAAAGGAGAGGCCCCTCCAGCGGCTACAGCAACC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGCCCGGGAGCCCACTaGCGGCCAAGACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSPGAH*RPRLPG
Trigger: TCCAGGAAGTCTTGGCCGCCAGTGGGCTCCCGGGCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGTCCATTGCCGGTGCTaGGGGATCCCGCACCCATTG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTVHCRC*GIPHPL
Trigger: CAATGGGTGCGGGATCCCTCAGCACCGGCAATGGAC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGCACTCGTTGCAGCTaGCCTCCTTGCTGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSTRCS*PPCWRA
Trigger: AGCCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTGGAAAAGGAGGCTaGGCACTCGTTGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAGKGG*ALVAAD
Trigger: GTCAGCTGCAACGAGTGCTCAGCCTCCTTTTCCAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGAGCCCCGCCAGGGCTaGGGTATTCGGGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHEPRQG*GIREGR
Trigger: CCGGCCTTCCCGAATACCTCAGCCCTGGCGGGGCTC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGAGCTGGTCATCCGTaGTCCTGGTGCGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGAGHP*SWCEAS
Trigger: AGAGGCCTCGCACCAGGATCACGGATGACCAGCTCC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACCTCCAGCTTCCTCTTaGGCGTGTTCATCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQPPASS*ACSSWR
Trigger: CCTCCACGATGAACACGCTCAAGAGGAAGCTGGAGG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGGTCCAGCTCTTGCTaGGCCATCAACTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRSSSC*AINWRT
Trigger: TGTACGCCAGTTGATGGCTCAGCAAGAGCTGGACCG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGCGGGCAGTGGGGCTaGGATGGTTGCTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGGQWG*DGCCSR
Trigger: GCGGCTACAGCAACCATCTCAGCCCCACTGCCCGCC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTCCTCCGACACCAGCTaGCCGCCCCCGAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHSSDTS*PPPRRM
Trigger: CATGCGCCTCGGGGGCGGGCAGCTGGTGTCGGAGGA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCCGGGAGGCCCTTCTaGAGCCGCTGCAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSGRPF*SRCSLR
Trigger: GCGCAAGCTGCAGCGGCTGCAGAAGGGCCTCCCGGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGGAGGTGGGTGAGGTaGAGCTGGAGGTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQWRWVR*SWRWIL
Trigger: CAAGATCCACCTCCAGCTGCACCTCACCCACCTCCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGATCAGGGCGGCCTGTTaGTGCAGCTCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTIRAAC*CSSCCR
Trigger: CCTGCAGCAGGAGCTGCAGCAACAGGCCGCCCTGAT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGGTGCTGCTGCTGCTaGAGCTGGAGCAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRCCCC*SWSKVS
Trigger: AGAGACCTTGCTCCAGCTGCAGCAGCAGCAGCACCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCCCGTGTTACCCTCTaGCCCCTCCGGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSRVTL*PLRPLP
Trigger: AGGGAGGGGCCGGAGGGGGCAGAGGGTAACACGGGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGCGGAGGGGGTGCCTaGGGAGGAGGCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCGGGA*GGGCGK
Trigger: CTTACCGCAGCCTCCTCCGCAGGCACCCCCTCCGCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAACAGCTCCATGGTTTTaGTCACGGGCGAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQTAPWF*SRARGA
Trigger: TGCCCCTCTCGCCCGTGAGCAAAACCATGGAGCTGT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACACCGGTGGCTGCGGCTaGTGGGGTTGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHTGGCG*WGCGGG
Trigger: GCCACCCCCACAACCCCAGCAGCCGCAGCCACCGGT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGGATCTGTTGGGCTaGTGGCGGCGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRDLLG*WRRRRL
Trigger: CAGCCTCCGCCGCCGCCAGCAGCCCAACAGATCCCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGCCCGCCTGGCACTTaGGGCAGACCAACTTGTACT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSPPGT*GRPTCT
Trigger: AGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGCAGCGGCTACGGCTaGGAGGGCCTCCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSSGYG*EGLLPF
Trigger: GAAGGGGAGGAGGCCCTCCCAGCCGTAGCCGCTGCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACGTGCCAAGCGCGGGTaGGGCTGCCCGCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRAKRG*GCPLLQ
Trigger: CTGCAAAAGCGGGCAGCCCCACCCGCGCTTGGCACG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAATGGAGCGCACGTGCTaGATGAGGTTGAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQMERTC*MRLSLA
Trigger: GGCCAAGCTCAACCTCATCCAGCACGTGCGCTCCAT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCGCTGCCGCTCCCCTaGTCTTTGGCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSLPLP*SLASSS
Trigger: AGAGGAGCTGGCCAAAGACCAGGGGAGCGGCAGCGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAACCTCAGGGTTGAGCTaGAACTCAGCGCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQTSGLS*NSALGM
Trigger: CATCCCCAGCGCTGAGTTCCAGCTCAACCCTGAGGT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGCTGCAGGATCTGCTaGTGGCTCTGCTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCCRIC*WLCCGI
Trigger: GATCCCACAGCAGAGCCACCAGCAGATCCTGCAGCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTCAGAGCCGCCCCCTaGTGCCAAGTCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLRAAP*CQVFLL
Trigger: GAGAAGAAAGACTTGGCACCAGGGGGCGGCTCTGAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGTGGCTCCGGGGTCTaGGGCCTCAGGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGGSGV*GLRGYS
Trigger: ACTGTACCCCCTGAGGCCCCAGACCCCGGAGCCACC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGTGGCTCCGGGGTCTaGGGCCTCAGGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGGSGV*GLRGYS
Trigger: ACTGTACCCCCTGAGGCCCCAGACCCCGGAGCCACC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACCAGTGCTCGAAGGATaGGAACGCCAGCTTGCACTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQPVLEG*ERQLAL
Trigger: CAGTGCAAGCTGGCGTTCCCATCCTTCGAGCACTGG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGGCCCCTGGGGGACTaGGGTTTGGCTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRPLGD*GLACFG
Trigger: CCCAAAGCAAGCCAAACCCCAGTCCCCCAGGGGCCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCGCACGCCAGGCAGTaGTACGAGCCGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSHARQ*YEPPPP
Trigger: TGGCGGAGGCGGCTCGTACCACTGCCTGGCGTGCGA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGAGGTGGGCGCTGTTaGGTTCAGTCCATTGCCGGT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGGGRC*VQSIAG
Trigger: ACCGGCAATGGACTGAACTCAACAGCGCCCACCTCC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCCGCCAGGCGCTCATTaGAGGGGGCCCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHPPGAH*RGPSGC
Trigger: ACAGCCTGAGGGCCCCCTTCAATGAGCGCCTGGCGG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGAATCCACTCATCATaGACTGGGCATCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGIHSS*TGHPKR
Trigger: CCGCTTCGGATGCCCAGTTCATGATGAGTGGATTCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAAGCGATGTTGGCACTaGTGGGGTTCCCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTKRCWH*WGSPEA
Trigger: CGCCTCTGGGGAACCCCATCAGTGCCAACATCGCTT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGCAGGAGGGCTGAATaGCTCTGGGAAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCRRAE*LWERES
Trigger: GCTCTCTCTTTCCCAGAGTCATTCAGCCCTCCTGCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGAGGCATCTGGCAGTaGTTCCTTTGGTCCCGTGTT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRGIWQ*FLWSRV
Trigger: AACACGGGACCAAAGGAATCACTGCCAGATGCCTCG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAATTCCCCCTGGCATCTaGAGCAATGCGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQIPPGI*SNAWRK
Trigger: CTTCCTCCACGCATTGCTTCAGATGCCAGGGGGAAT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGAGAGGGGCACACCCTaGCCGTCACTACTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTERGTP*PSLLLG
Trigger: CCCGAGCAGTAGTGACGGTCAGGGTGTGCCCCTCTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAACATCCCTTGTTGTTaGGCTGCCAGTCCGAGGACC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQNIPCC*AASPRT
Trigger: GGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCCGACTCGAGATGCTaGCTCAGCGCTTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALADSRC*LSASSP
Trigger: CGGGGAGGAAGCGCTGAGTCAGCATCTCGAGTCGGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGTTGGCATCGAGGGCTaGACCCCTGAGGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTVGIEG*TPEVLH
Trigger: ATGCAGCACCTCAGGGGTTCAGCCCTCGATGCCAAC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGTCGGACTTTTGGCTaGGATCCGTGTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRRTFG*DPCQTP
Trigger: AGGAGTCTGACACGGATCTCAGCCAAAAGTCCGACG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTTATCTCCTTCAGCTaGCCCAGAGTCCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLISFS*PRVLAL
Trigger: GAGGGCAAGGACTCTGGGGCAGCTGAAGGAGATAAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCAGCCTCCTGCCCTCTaGCACGTTGGCCCTGACGCC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHQPPAL*HVGPDA
Trigger: GGCGTCAGGGCCAACGTGGCAGAGGGCAGGAGGCTG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCCCCTGGCTCCGGGTaGTTCTCCTTCATGTGCGCC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPPGSG*FSFMCA
Trigger: GGCGCACATGAAGGAGAAGCACCCGGAGCCAGGGGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGTAGCGGCAGAGCTTaGACTGGTAAGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCSGRA*TGKSPP
Trigger: TGGGGGACTCTTACCAGTGCAAGCTCTGCCGCTACA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGATGACGCTGCCCTCTTaGTCTGCCCTTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTMTLPS*SALPRC
Trigger: GCAGCGAGGAAGGGCAGAGCAAGAGGGCAGCGTCAT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGTGTGCCTGGACTTaGGCCTGGGCCTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRCAWT*AWAWAS
Trigger: ACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACACCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGCTGGCTGGGGAGGTaGGGTAGGAAGCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHSWLGR*GRKRRR
Trigger: CCGCCTCCGCTTCCTACCGCACCTCCCCAGCCAGCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGCTCCAGCTGCTGCTaGATCTCTGGCTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCSSCC*ISGFGC
Trigger: ACAGCCAAAGCCAGAGATGCAGCAGCAGCTGGAGCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTCTCTTGGCTTCGTaGCAGTGTCGAGACCGGATA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQALLAS*QCRDRI
Trigger: TATCCGGTCTCGACACTGGCACGAAGCCAAGAGAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGGCTGAGGGGCCATTaGCATGGTGGCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTWLRGH*HGGLCW
Trigger: CCAGCACAAGCCACCATGGCAATGGCCCCTCAGCCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAATGCCATACATGGGCTaGAGGTACCCACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQMPYMG*RYPLCR
Trigger: CCTGCAGAGTGGGTACCTGCAGCCCATGTATGGCAT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCTGCTCCATGCTACTaGGTTTGTCGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTAAPCY*VCRGGG
Trigger: CCCACCTCCCCGACAAACCCAGTAGCATGGAGCAGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCATGGCTCTCGCCTGTaGGCTGCTCCATGCTACTGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTHGSRL*AAPCYW
Trigger: CCAGTAGCATGGAGCAGCCCACAGGCGAGAGCCATG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGACGCAGGAGCCCCCTaGCTCCGGGTGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALDAGAP*LRVLLL
Trigger: AAGGAGAAGCACCCGGAGCCAGGGGGCTCCTGCGTC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAACCGCCACGTGGGTTTaGTTTTTGGTTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQTATWV*FLVWWG
Trigger: CCCCCACCAAACCAAAAACCAAACCCACGTGGCGGT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTGCCTCTTCCAAAGTaGAGTTCCCATCTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLPLPK*SSHLGP
Trigger: CGGACCGAGATGGGAACTCCACTTTGGAAGAGGCAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTATTGTCCGGGCTGCTaGTGGGCTCCGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHYCPGC*WAPAGR
Trigger: CCGGCCAGCCGGAGCCCACCAGCAGCCCGGACAATA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAACTTGCGCCTGGGCCTaGGCGAGTGTCTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTTCAWA*ASVWAC
Trigger: GCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGAGCAAGGTCTCTGTaGTCATGGGGAAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGARSL*SWGSVG
Trigger: TCCCACACTTCCCCATGACCACAGAGACCTTGCTCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTCTTTTCCGGGTGTTaGCTTGGCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQFFSGC*LGCRRA
Trigger: AGCCCTCCTGCAGCCAAGCCAACACCCGGAAAAGAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGTGCAGGGATCTGTTaGGCTGCTGGCGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGAGIC*AAGGGG
Trigger: TCCGCCGCCGCCAGCAGCCCAACAGATCCCTGCACC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGGGGGACTGGGGTTTaGCTTGCTTTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTWGTGV*LALGCC
Trigger: GCAGCAGCCCAAAGCAAGCCAAACCCCAGTCCCCCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGACTTCCTGGAGGCGTaGGGGGAAGCGGACGAGGAC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALDFLEA*GEADED
Trigger: GTCCTCGTCCGCTTCCCCCCACGCCTCCAGGAAGTC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGTCCTTGGGGCAGCTaGGGTCTTTGGGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCPWGS*GLWDPP
Trigger: TGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTCCATTGCCGGTGCTaGGGGATCCCGCACCCATTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALVHCRC*GIPHPL
Trigger: CAATGGGTGCGGGATCCCTCAGCACCGGCAATGGAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCTGGAAAAGGAGGCTaGGCACTCGTTGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTAGKGG*ALVAAD
Trigger: GTCAGCTGCAACGAGTGCTCAGCCTCCTTTTCCAGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCGATGGCCACACACTTaGGCCTCCACTCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRWPHT*ASTHWP
Trigger: AGGCCAATGAGTGGAGGCTCAAGTGTGTGGCCATCG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGCACCTGCGGATGGTaGAGATCTGGCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGTCGW*RSGPGP
Trigger: AGGACCTGGGCCAGATCTTCACCATCCGCAGGTGCC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAACTCCTTCTCTGCCTaGCTGGATGACGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTNSFSA*LDDAAL
Trigger: GAGGGCAGCGTCATCCAGTCAGGCAGAGAAGGAGTT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGTCCGCCATCTCTTTaGTCTGCTCCTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCPPSL*SAPHWG
Trigger: CCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCTCCAGCTTCCTCTTaGGCGTGTTCATCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPPASS*ACSSWR
Trigger: CCTCCACGATGAACACGCTCAAGAGGAAGCTGGAGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGCTCGGGGCTGGGCTaGCCAGACCAGATGACAACC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSSGLG*PDQMTT
Trigger: GGTTGTCATCTGGTCTGGTCAGCCCAGCCCCGAGCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTGTGGCTGAAGACCTaGTCGCCCCCTCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLWLKT*SPPPFC
Trigger: GCAGAACGGAGGGGGCGAGCAGGTCTTCAGCCACAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATCATGCTGCTGCAGGTaGTTGTACAGCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSCCCR*LYSFRL
Trigger: CAGCCTGAAGCTGTACAAGCACCTGCAGCAGCATGA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTCATGGAGCGCACGTaGTGGATGAGGTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQFMERT*WMRLSL
Trigger: CAAGCTCAACCTCATCCAGCACGTGCGCTCCATGAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCTGCCCTCTTGCTCTaGCCTTCCTCGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHAALLL*PSSLPL
Trigger: GAGCGGCAGCGAGGAAGGGCAGAGCAAGAGGGCAGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCCGTGCTCCATGCTTaGAGGTGGCAAGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAVLHA*RWQDVL
Trigger: AAGAACATCTTGCCACCTGCAAGCATGGAGCACGGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGCTGCTGCTGCTGTTaGCTGGACGCAATCATATCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCCCCC*LDAIIS
Trigger: GGATATGATTGCGTCCAGGCAACAGCAGCAGCAGCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGCTGCTGCTGCTGCTaGTGTTGCCTGGACGCAATC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCCCCC*CCLDAI
Trigger: GATTGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCGAGTGTCTGGGCTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALASVWA*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTCCTGCTGCAGGTGTaGCTGGACTTGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLLLQV*LDLRLG
Trigger: GCCCAGGCGCAAGTCCAGGCACACCTGCAGCAGGAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCATCAGGGCGGCCTGTTaGTGCAGCTCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALIRAAC*CSSCCR
Trigger: CCTGCAGCAGGAGCTGCAGCAACAGGCCGCCCTGAT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTTCTCGAGGACCGCTTaGTCCCCCAGTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTFSRTA*SPSTPA
Trigger: AGCAGGAGTACTGGGGGAGCAAGCGGTCCTCGAGAA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCTCTTCTCCTCCCGTaGCGCTGTCGTTCTCACCGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALALLLP*RCRSHR
Trigger: CCGGTGAGAACGACAGCGGCACGGGAGGAGAAGAGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGTGGTGTCTGTGATTaGGGTGTTGACCGAGGAACA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRGVCD*GVDRGT
Trigger: TGTTCCTCGGTCAACACCGCAATCACAGACACCACG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCAGCGGACCCGCTTaGCCCGGGGCTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPASGPA*PGAWGA
Trigger: TGCTCCCCAAGCCCCGGGGCAAGCGGGTCCGCTGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGCAGGTACCCACTCTaGAGGGCGCCAGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCRYPL*RAPGIW
Trigger: CCAGATCCCTGGCGCCCTGCAGAGTGGGTACCTGCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGTTCAAGAGGGTGCTaGGGGTCAAGAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGSRGC*GSRDQP
Trigger: AGGCTGGTCTCTTGACCCCCAGCACCCTCTTGAACC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTTCCTCTGGGTCAGTaGAGGGGCACCTGCGGATGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLPLGQ*RGTCGW
Trigger: CCATCCGCAGGTGCCCCTCCACTGACCCAGAGGAAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTCCATGCTTGCAGGTaGCAAGATGTTCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLHACR*QDVLSR
Trigger: CCGGGAAAGAACATCTTGCCACCTGCAAGCATGGAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCCGGTTGGCCTCTTTaGGCTCTGAAGGGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSGWPL*ALKGKR
Trigger: TCGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTGTCAGTGCCCCGCTaGTCACAGGCAGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALVSVPR*SQAGSP
Trigger: AGGTGAGCCTGCCTGTGACCAGCGGGGCACTGACAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGATGGGCAGCTCCATTaGCATGGAGAGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTDGQLH*HGELGE
Trigger: CTCACCCAGCTCTCCATGCCAATGGAGCTGCCCATC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGAGCTGCGAGGGACTaGGGCTTGACTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRAARD*GLTGGG
Trigger: CCCTCCCCCAGTCAAGCCCCAGTCCCTCGCAGCTCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCACCCGAGAGCAGCTaGCTGGCCAGGAGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALAPESS*LARSGL
Trigger: TAACCCACTCCTGGCCAGCCAGCTGCTCTCGGGTGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCACCCGAGAGCAGCTaGCTGGCCAGGAGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTAPESS*LARSGL
Trigger: TAACCCACTCCTGGCCAGCCAGCTGCTCTCGGGTGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGCGGGGTCAGCTGTaGTGCAGGGATCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLRGQL*CRDLLG
Trigger: GCCCAACAGATCCCTGCACCACAGCTGACCCCGCAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTGCGGGGTCAGCTGTaGTGCAGGGATCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLRGQL*CRDLLG
Trigger: GCCCAACAGATCCCTGCACCACAGCTGACCCCGCAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCCTTTCTCCTTCTTaGGGACGGGGAGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLLSPS*GRGGAP
Trigger: GGGAGCCCCTCCCCGTCCCCAAGAAGGAGAAAGGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGGTTCACCACAGACTaGCCGAAGCAGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRFTTD*PKQQRD
Trigger: GTCCCTCTGCTGCTTCGGCCAGTCTGTGGTGAACCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGAGGTGGGCGCTGTTaGGTTCAGTCCATTGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGGGRC*VQSIAG
Trigger: ACCGGCAATGGACTGAACTCAACAGCGCCCACCTCC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAGCCCCGCCAGGGCTaGGGTATTCGGGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPEPRQG*GIREGR
Trigger: CCGGCCTTCCCGAATACCTCAGCCCTGGCGGGGCTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGGTTTGATCTCCTCTaGTGCTTTTGGCCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGFDLL*CFWPLR
Trigger: TCGAAGAGGCCAAAAGCATCAGAGGAGATCAAACCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCCAGCAGAGGAAGCCTaGGTCTTCTCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALPAEEA*VFSPAA
Trigger: AGCTGCGGGAGAGAAGACTCAGGCTTCCTCTGCTGG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGACATGGTGGCGGCTCTaGTCACGTGGTACTGAGAGT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTTWWRL*SRGTES
Trigger: ACTCTCAGTACCACGTGATCAGAGCCGCCACCATGT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGCCTCTTTGGGCTCTaGAGGGGAAGCGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGLFGL*RGSDVG
Trigger: GCCAACATCGCTTCCCCTTCAGAGCCCAAAGAGGCC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGCTCACCTCAGGGTTaGGCTGGAACTCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGSPQG*AGTQRW
Trigger: CCAGCGCTGAGTTCCAGCTCAACCCTGAGGTGAGCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGTGGGATCTGGACCTaGGCCTTCAGATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCGIWT*AFRSSS
Trigger: GCTGGAAGATCTGAAGGCTCAGGTCCAGATCCCACA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGTCGAAGTACTGCCTaGGCACTCGGAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCRSTA*ALGAGH
Trigger: ATGACCAGCTCCGAGTGCTCAGGCAGTACTTCGACA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACACGTGTGGAGGGGCTTaGGGGGCAGATGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHTCGGA*GADGRA
Trigger: AGCTCTCCCATCTGCCCCTCAAGCCCCTCCACACGT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGGGATCAAACAGCATaGAAGGCATGTCCAACGACC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQWDQTA*KACPTT
Trigger: GGTCGTTGGACATGCCTTTCATGCTGTTTGATCCCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCGAAGGGGAAGTGGCTaGGCTCGCTGGGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRRGSG*ARWDLR
Trigger: CCTCAGATCCCAGCGAGCTCAGCCACTTCCCCTTCG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCCTCGCGCTGTACTTaGTGCCACACAAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTASRCT*CHTKCT
Trigger: AGTGCACTTTGTGTGGCATCAAGTACAGCGCGAGGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTGCCGGTGGGGACATaGAGCACCATCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLPVGT*STISCR
Trigger: CCTGCAAGAGATGGTGCTTCATGTCCCCACCGGCAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTTGGCATCGAGGGCTaGACCCCTGAGGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALVGIEG*TPEVLH
Trigger: ATGCAGCACCTCAGGGGTTCAGCCCTCGATGCCAAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAAAACGCGGAAGCTGTaGAGGACAGGGCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTKTRKL*RTGLSP
Trigger: GGGGCTCAGCCCTGTCCTGCACAGCTTCCGCGTTTT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAAAACGCGGAAGCTGTaGAGGACAGGGCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALKTRKL*RTGLSP
Trigger: GGGGCTCAGCCCTGTCCTGCACAGCTTCCGCGTTTT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACAAGGTCCTTTTTGCTaGTACCACCTGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTQGPFC*YHLRGP
Trigger: GGGCCCCCGCAGGTGGTAGCAGCAAAAAGGACCTTG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACGTCCTCCGAGAGGCTaGGCTCCACGTTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRPPRG*APRSCA
Trigger: TGCACATGAACGTGGAGCGCAGCCTCTCGGAGGACG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCTCACTGCGCTGGTaGTTCATGGAGCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLSLRW*FMERTC
Trigger: GCACGTGCGCTCCATGAAGCACCAGCGCAGTGAGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGCGCAGGCTCTCACTaGGCTGGTGCTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCAGSH*AGASWS
Trigger: GCTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTCTGGGTCAGCAGATaGTTCGCTGGGTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLWVSR*FAGSFG
Trigger: GCCGAAGGACCCAGCGAAGCATCTGCTGACCCAGAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCTGGGTCAGCAGATaGTTCGCTGGGTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLWVSR*FAGSFG
Trigger: GCCGAAGGACCCAGCGAAGCATCTGCTGACCCAGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAATGACGCTGCCCTCTTaGTCTGCCCTTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTMTLPS*SALPRC
Trigger: GCAGCGAGGAAGGGCAGAGCAAGAGGGCAGCGTCAT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGTGCGTTTGGTGGTTaGAGGGGAATCCGTCAACTC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGAFGG*RGIRQL
Trigger: GAGTTGACGGATTCCCCTGCAACCACCAAACGCACC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTCCACGCAGTCAGGTaGCACGCTGTGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLHAVR*HAVEVG
Trigger: ACCCACCTCCACAGCGTGGCACCTGACTGCGTGGAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCGTGCCTTGGTCTGGTaGAGCACAGACCGCATGTGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALRALVW*STDRMW
Trigger: CCACATGCGGTCTGTGCTGCACCAGACCAAGGCACG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGCTGCTGCAGGATCTaGTGGTGGCTCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCCCRI*WWLCCG
Trigger: CCCACAGCAGAGCCACCAGCAGATCCTGCAGCAGCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGCTGCTGCTGCTGCTaGAGGATCTGCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCCCCC*RICWWL
Trigger: GAGCCACCAGCAGATCCTGCAGCAGCAGCAGCAGCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCTGCTGCTGCTGCTaGTGCAGGATCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLCCCC*CRICWW
Trigger: CCACCAGCAGATCCTGCAGCAGCAGCAGCAGCAGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGTTTGGTTTGGCTGTaGACTGGGAGGGTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGLVWL*TGRVGL
Trigger: CAGGCCGACCCTCCCAGTGCACAGCCAAACCAAACC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCCAGCGGACCCGCTTaGCCCGGGGCTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEASGPA*PGAWGA
Trigger: TGCTCCCCAAGCCCCGGGGCAAGCGGGTCCGCTGGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTGCGAAAACGTTTCTaGCCAGGTCGATCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALVRKRF*PGRSPP
Trigger: CGGCGGGGATCGACCTGGGCAGAAACGTTTTCGCAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCCTTGTTGTTGAGCTaGCAGTCCGAGGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPLLLS*QSEDLV
Trigger: AACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCAACACAGGAGGGATaGCCTGGAGCGCTGGATACG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALATQEG*PGALDT
Trigger: CGTATCCAGCGCTCCAGGGCATCCCTCCTGTGTTGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGTACGCGGAGCCGTCTaGCTGGTAGACGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHVRGAV*LVDDLP
Trigger: GGGGAGATCGTCTACCAGCCAGACGGCTCCGCGTAC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCGCTCTGGGCCAGCTaGCTCAGGCTCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPLWAS*LRLSTM
Trigger: CATTGTTGAGAGCCTGAGCCAGCTGGCCCAGAGCGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTCAGGGTCATTCGATaGTCGTGCACCGCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLRVIR*SCTAWV
Trigger: GACCCACGCGGTGCACGACCATCGAATGACCCTGAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGTCAAGAGACCAGCCTaGGGCTGCTCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHVKRPA*GCSGPA
Trigger: TGCTGGCCCTGAGCAGCCCCAGGCTGGTCTCTTGAC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGCATCATGGTCATGTaGCCGCCCAGCGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCIMVM*PPSERE
Trigger: CTCACGCTCGCTGGGCGGCCACATGACCATGATGCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGTCCATCTTCAGGTTaGGCAGGTTCATGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQCPSSG*AGSCSG
Trigger: CCCAGAACATGAACCTGCCCAACCTGAAGATGGACA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGCTCTCACTGCGCTaGTGCTTCATGGAGCGCACG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRLSLR*CFMERT
Trigger: CGTGCGCTCCATGAAGCACCAGCGCAGTGAGAGCCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTTCCTCTGGGTCAGTaGAGGGGCACCTGCGGATGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLPLGQ*RGTCGW
Trigger: CCATCCGCAGGTGCCCCTCCACTGACCCAGAGGAAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGTCTTCAGCCAGGGTaGGGTCTCCCATCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGLQPG*GLPSPR
Trigger: TCTTGGCGATGGGAGACCCCACCCTGGCTGAAGACC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCGACGCGGGGATGGCTaGCGCGGAAGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERRGDG*RGSWLG
Trigger: CCCCAGCCAGCTTCCGCGCCAGCCATCCCCGCGTCG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGGCAGAGTCTGCAGTaGCATTGTCTGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQWQSLQ*HCLHHQ
Trigger: CTGATGATGCAGACAATGCCACTGCAGACTCTGCCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGCTTGATCACTTTCTaGGGCAGGCCCGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCLITF*GRPDLS
Trigger: GGACAAGTCGGGCCTGCCCCAGAAAGTGATCAAGCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTGCATCTCTGGCTTTaGCTGTCCTTGCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLHLWL*LSLLLL
Trigger: CAAGAGAAGCAAGGACAGCCAAAGCCAGAGATGCAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCGTCGAAGGGGAAGTaGCTGAGCTCGCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALASKGK*LSSLGS
Trigger: AGATCCCAGCGAGCTCAGCCACTTCCCCTTCGACGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCGTCGAAGGGGAAGTaGCTGAGCTCGCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTASKGK*LSSLGS
Trigger: AGATCCCAGCGAGCTCAGCCACTTCCCCTTCGACGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCTGCTCCGGGGTTATaGTCGTCCTCAAACGCTTGT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTAAPGL*SSSNAC
Trigger: ACAAGCGTTTGAGGACGACCATAACCCCGGAGCAGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAAGGTACCGTTGTGCTaGGCAGACCCATCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTKVPLC*ADPSGS
Trigger: CGAACCTGATGGGTCTGCCCAGCACAACGGTACCTT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGGGGGACTGGGGTTTaGCTTGCTTTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTWGTGV*LALGCC
Trigger: GCAGCAGCCCAAAGCAAGCCAAACCCCAGTCCCCCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCGGGAAGGCCGGGTCTaGGCCTTCAAACCATTTCCC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHREGRV*AFKPFP
Trigger: GGGAAATGGTTTGAAGGCTCAGACCCGGCCTTCCCG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCCAGGTTGTCCGTCGTaGACTTGTTGCAGACGGCAC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALPGCPS*TCCRRH
Trigger: GTGCCGTCTGCAACAAGTTCACGACGGACAACCTGG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAACTCCTTCTCTGCCTaGCTGGATGACGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALNSFSA*LDDAAL
Trigger: GAGGGCAGCGTCATCCAGTCAGGCAGAGAAGGAGTT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGTCCGCCATCTCTTTaGTCTGCTCCTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCPPSL*SAPHWG
Trigger: CCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCTCTGCTTTCGAGTTaGAGGTGGCCAGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPLLSS*RWPVHQ
Trigger: CTGATGAACTGGCCACCTTCAACTCGAAAGCAGAGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGGCTGTCGTTTGAGTaGGCGGCAGACTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGLSFE*AADCEV
Trigger: TACCTCGCAGTCTGCCGCTCACTCAAACGACAGCCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGTGGGCTGCTCCATaGTACTGGGTTTGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLWAAP*YWVCRG
Trigger: TCCCCGACAAACCCAGTAGCATGGAGCAGCCCACAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGAGCAAGGTCCTTTTTaGTGCTACCACCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTEQGPF*CYHLRG
Trigger: CCCCCGCAGGTGGTAGCAGCAAAAAGGACCTTGCTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACATCATCGCCCTCTGTaGTTTCATTTGGTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQHHRPL*FHLVLV
Trigger: CACCAGAACCAAATGAAAGCACAGAGGGCGATGATG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGGTACTTCTGCACGTaGTTGTCCGTCTTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTWYFCT*LSVLQC
Trigger: GCACTGCAAGACGGACAAGCACGTGCAGAAGTACCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTACCCGGGAAGGAGGTaGGTTTGGTGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHYPGRR*VWWLQG
Trigger: CCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGAGCCTGAATCCTCCTaGACTGACCCAGAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTEPESS*TDPESL
Trigger: CAGCGACTCTGGGTCAGTGCAGGAGGATTCAGGCTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGTTGCTGTTCCCACTTaGAGCCTCCAGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTVAVPT*SLQLGC
Trigger: GCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAAC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGCTGCTGCTGCTGTTaGCTGGACGCAATCATATCC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCCCCC*LDAIIS
Trigger: GGATATGATTGCGTCCAGGCAACAGCAGCAGCAGCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGCTGCTGCTGCTGCTaGTGTTGCCTGGACGCAATC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCCCCC*CCLDAI
Trigger: GATTGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAAGAGGAGGTGCTGCTaGTGCTGCAGCTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALKRRCC*CCSWSK
Trigger: CTTGCTCCAGCTGCAGCAGCAGCAGCACCTCCTCTT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCCCGTGTTACCCTCTaGCCCCTCCGGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSRVTL*PLRPLP
Trigger: AGGGAGGGGCCGGAGGGGGCAGAGGGTAACACGGGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTGGGAGGGTCGGCCTaGTTTGGCTTCTCATCGCTT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLGGSA*FGFSSL
Trigger: AAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGGGAGGGTCGGCCTaGTTTGGCTTCTCATCGCTT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLGGSA*FGFSSL
Trigger: AAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGCTGCTCCAGCTGCTaGTGCATCTCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSCSSC*CISGFG
Trigger: GCCAAAGCCAGAGATGCAGCAGCAGCTGGAGCAGCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGTGCGTTTGTCTTCTaGTCCAGCTGCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGAFVF*SSCSSC
Trigger: GCAGCTGGAGCAGCTGGAGCAGAAGACAAACGCACC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCTGCGGAGGAGGCTaGGGTAAGGAAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPACGGG*GKEGAA
Trigger: GGCTGCCCCTTCCTTACCGCAGCCTCCTCCGCAGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCTGACCGTCACTACTaGTCGGGGGTAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPDRHY*SGVGGK
Trigger: TTTCCCACCTACCCCCGAGCAGTAGTGACGGTCAGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGGAAGGTACCGTTGTaGTGGGCAGACCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGKVPL*WADPSG
Trigger: ACCTGATGGGTCTGCCCAGCACAACGGTACCTTCCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGGCTGAGGGGCCATTaGCATGGTGGCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHWLRGH*HGGLCW
Trigger: CCAGCACAAGCCACCATGGCAATGGCCCCTCAGCCA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCCTTACGTTGCTGCTaGGGGGTCAGCTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSLRCC*GVSCGA
Trigger: TGCACCACAGCTGACCCCGCAGCAGCAACGTAAGGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACCGCACTTGCACTTTTaGTTTCTGCTTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQPHLHF*FLLLAL
Trigger: AAGAGCCAGAAGCAGAAAGCAAAAGTGCAAGTGCGG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGTTTGTCGGGGAGGTaGGCGCTGTTGAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGLSGR*ALLSSV
Trigger: GACTGAACTCAACAGCGCCCACCTCCCCGACAAACC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCTCGCCCTCCTCGCTaGTGTCGCTGGCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPRPPR*CRWRSP
Trigger: AGGAGAGCGCCAGCGACACCAGCGAGGAGGGCGAGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGCATCATGGTCATGTaGCCGCCCAGCGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCIMVM*PPSERE
Trigger: CTCACGCTCGCTGGGCGGCCACATGACCATGATGCA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCACTCATCATGAACTaGGCATCCGAAGCGGTACTG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPLIMN*ASEAVL
Trigger: CAGTACCGCTTCGGATGCCCAGTTCATGATGAGTGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGGCTCTCACTGCGCTaGTGCTTCATGGAGCGCACG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRLSLR*CFMERT
Trigger: CGTGCGCTCCATGAAGCACCAGCGCAGTGAGAGCCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGAAGGAGGTGCGTTTaGTGGTTGCAGGGGAATCCG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGRRCV*WLQGNP
Trigger: CGGATTCCCCTGCAACCACCAAACGCACCTCCTTCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATATTGTCCGGGCTGCTaGTGGGCTCCGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPYCPGC*WAPAGR
Trigger: CCGGCCAGCCGGAGCCCACCAGCAGCCCGGACAATA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCTGGACTTGCGCCTaGGCCTGGGCGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPAWTCA*AWASVW
Trigger: CCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGTCTCTGTGGTCATaGGGAAGTGTGGGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRSLWS*GSVGGA
Trigger: CGCTCCTCCCACACTTCCCCATGACCACAGAGACCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGTCTGCATCATCAGTaGCGAGAAGATGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCLHHQ*REDGQL
Trigger: GAGCTGCCCATCTTCTCGCCACTGATGATGCAGACA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGAGCACTCGGAGCTaGTCATCCGTGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLSTRS*SSVILV
Trigger: CACCAGGATCACGGATGACCAGCTCCGAGTGCTCAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGTTTGGCTGTGCACTaGGAGGGTCGGCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGLAVH*EGRPAL
Trigger: CAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCCAGTGCTCGAAGGATaGGAACGCCAGCTTGCACTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALPVLEG*ERQLAL
Trigger: CAGTGCAAGCTGGCGTTCCCATCCTTCGAGCACTGG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGTTCATCGTGGAGGTaGGCGTCGAAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCSSWR*ASKGKW
Trigger: CCACTTCCCCTTCGACGCCCACCTCCACGATGAACA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACACAGTCTAAGAGCATaGCAGACAGAGTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQHSLRA*QTESGC
Trigger: ACAACCTGACTCTGTCTGCCATGCTCTTAGACTGTG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCTGCTCGGGGGTAGGTaGGAAAAGCTAGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLLGGR*EKLVPS
Trigger: TGATGGAACTAGCTTTTCCCACCTACCCCCGAGCAG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCTCACACTCCAGCATaGTGGGTGTCCTGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPHTPA*WVSCSH
Trigger: ATGACTACAGGACACCCACCATGCTGGAGTGTGAGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTCTCCTTGTCCAGCTaGCTTCCAATGGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQFSLSS*LPMVSL
Trigger: TAAGGACACCATTGGAAGCCAGCTGGACAAGGAGAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCATGGTGGCTTGTGCTaGGGTCGGGGAACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHHGGLC*GRGTQR
Trigger: TCGCTGAGTTCCCCGACCCCAGCACAAGCCACCATG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGGTTTGGCTTGCTTTaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGFGLL*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCAAAGCAAGCCAAACCC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGTTCACCACAGACTaGCCGAAGCAGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRFTTD*PKQQRD
Trigger: GTCCCTCTGCTGCTTCGGCCAGTCTGTGGTGAACCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCAGACCACTGTCCTTaGGGCAGCTGGGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSDHCP*GSWGLW
Trigger: CCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 72 bp CGTAAACACGCGTGCCTCGCGCACGGGCTTGCTTCTTaGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKHACLAHGLAS*LSVHCYLFCWL
Trigger: CAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTGCGCGAGGCACGCGTGTTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCCGCCCAGCGAGCGTaGGGAGCCCAGGACCGTGTC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRAAQRA*GAQDRV
Trigger: GACACGGTCCTGGGCTCCTCACGCTCGCTGGGCGGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCCAGGTTGTCCGTCGTaGACTTGTTGCAGACGGCAC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHPGCPS*TCCRRH
Trigger: GTGCCGTCTGCAACAAGTTCACGACGGACAACCTGG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGTTGGGGCCTTTCCTaGAAGGCAGAGCTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSWGLS*KAELAL
Trigger: CAAAGCGAGCTCTGCCTTTCAGGAAAGGCCCCAACT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGGTCAAAGATGCGCTaGAACACGAGGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRSKMR*NTRLHF
Trigger: AAAGTGCAGCCTCGTGTTTCAGCGCATCTTTGACCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAAAACTGGGGGTGAATaGACTGGTTCTGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTKTGGE*TGSGHS
Trigger: TGAGTGCCCAGAACCAGTTCATTCACCCCCAGTTTT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCCACAGCCCGGAACTaGCCTTTCCTTTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPTARN*PFLSRA
Trigger: CGCCCGGGAAAGGAAAGGTCAGTTCCGGGCTGTGGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCGGTCCAGCTCTTGCTaGGCCATCAACTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRSSSC*AINWRT
Trigger: TGTACGCCAGTTGATGGCTCAGCAAGAGCTGGACCG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGGGCTGCCCGCTTTTaGAGTAGACGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGAARF*SRRRSP
Trigger: GGGGCTCCTGCGTCTACTGCAAAAGCGGGCAGCCCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCGCCCCCTCCGTTCTaGAGGTTCTGCATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSPPPF*RFCMLL
Trigger: CAACAACATGCAGAACCTGCAGAACGGAGGGGGCGA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGCAGCATCATGTTGTaGATGTGTTTCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSSIML*MCFSLV
Trigger: GACCAGTGAGAAACACATGCACAACATGATGCTGCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCCCAGGTGGCGGTTGTaGTGGATCTGGGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHPRWRL*WIWVMF
Trigger: GAACATGACCCAGATCCAGCACAACCGCCACCTGGG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGTAGCGGCAGAGCTTaGACTGGTAAGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCSGRA*TGKSPP
Trigger: TGGGGGACTCTTACCAGTGCAAGCTCTGCCGCTACA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCACGCCACTCTCATGCTaGTGCAGGTGCTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALTPLSC*CRCLYS
Trigger: GCTGTACAAGCACCTGCAGCAGCATGAGAGTGGCGT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCCACGCCACTCTCATaGTGCTGCAGGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSTPLS*CCRCLY
Trigger: GTACAAGCACCTGCAGCAGCATGAGAGTGGCGTGGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCTGCCCTCTTGCTCTaGCCTTCCTCGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPAALLL*PSSLPL
Trigger: GAGCGGCAGCGAGGAAGGGCAGAGCAAGAGGGCAGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGTGCGTTTGGTGGTTaGAGGGGAATCCGTCAACTC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGAFGG*RGIRQL
Trigger: GAGTTGACGGATTCCCCTGCAACCACCAAACGCACC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGAAAGTCCGGAAACTaGGCTGACAGAGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGKSGN*ADRGST
Trigger: TGTGCTGCCTCTGTCAGCGCAGTTTCCGGACTTTCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGAGGCTGCACTTTTTaGACTGGTAATTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRGCTF*TGNSSC
Trigger: GCAACTTGAATTACCAGTGCAAAAAGTGCAGCCTCG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTGAAACACGAGGCTaGACTTTTTGCACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAETRG*TFCTGN
Trigger: ATTACCAGTGCAAAAAGTGCAGCCTCGTGTTTCAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGCTGCTCCAGCTGCTaGTGCATCTCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHSCSSC*CISGFG
Trigger: GCCAAAGCCAGAGATGCAGCAGCAGCTGGAGCAGCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGCACTGCGGAGGGGGTaGCTGCGGAGGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQALRRG*LRRRLR
Trigger: CCGCAGCCTCCTCCGCAGGCACCCCCTCCGCAGTGC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCATGGGAACGCCAGCTTaGACTGGTCACACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALMGTPA*TGHTGR
Trigger: CCTACCAGTGTGACCAGTGCAAGCTGGCGTTCCCAT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGTTGTCATATTCCTTaGTATAAAAGCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRCHIP*YKSSGL
Trigger: CAGCCCCGAGCTTTTATAGCAAGGAATATGACAACG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCAATCCAATGTCATTaGCTAGAACCTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAIQCH*LEPHTP
Trigger: TGGAGTGTGAGGTTCTAGGCAATGACATTGGATTGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGCTGCACCGGTGGCTaGGGCTGCTGGGGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECCTGG*GCWGCG
Trigger: CCCACAACCCCAGCAGCCGCAGCCACCGGTGCAGCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCATGCCATACATGGGCTaGAGGTACCCACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALMPYMG*RYPLCR
Trigger: CCTGCAGAGTGGGTACCTGCAGCCCATGTATGGCAT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGCTGCTGCTGCTGCTaGTGCTGTACTTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCCCCC*CCTFCC
Trigger: GCAACAAAAAGTACAGCAGCAGCAGCAGCAGCAGCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGACTGGGGTTTGGCTTaGTTTGGGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHDWGLA*FGLLLL
Trigger: CAGCAGCAGCAGCCCAAAGCAAGCCAAACCCCAGTC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGAGGGAGTCCGCACTTaGACTTTTGCTTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTEGVRT*TFAFCF
Trigger: GAAGCAGAAAGCAAAAGTGCAAGTGCGGACTCCCTC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGTTTGTCGGGGAGGTaGGCGCTGTTGAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGLSGR*ALLSSV
Trigger: GACTGAACTCAACAGCGCCCACCTCCCCGACAAACC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACACGCGGCCCCGCTCTaGGCCAGCTGGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRHAAPL*ASWLRL
Trigger: GAGCCTGAGCCAGCTGGCCCAGAGCGGGGCCGCGTG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGAAGTAGTAGAAGCTaGGCCCCTCGACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALRSSRS*APRQGL
Trigger: CAGACCCTGTCGAGGGGCCCAGCTTCTACTACTTCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATACGAGAATGCATCATaGTCATGTGGCCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTYENAS*SCGRPA
Trigger: CGCTGGGCGGCCACATGACCATGATGCATTCTCGTA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGAAGAGCTTCAGCGATaGGTCGTTGGTCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTEELQR*VVGLDE
Trigger: TTCATCCAGACCAACGACCCATCGCTGAAGCTCTTC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAATGTGGGCCACCAGCTaGTACTTCTGCACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTMWATS*YFCTCL
Trigger: CAAGCACGTGCAGAAGTACCAGCTGGTGGCCCACAT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCATGTGGGCCACCAGCTaGTACTTCTGCACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALMWATS*YFCTCL
Trigger: CAAGCACGTGCAGAAGTACCAGCTGGTGGCCCACAT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACATGGAGCGCACGTGCTaGATGAGGTTGAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHMERTC*MRLSLA
Trigger: GGCCAAGCTCAACCTCATCCAGCACGTGCGCTCCAT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGTTGAGCATGTCTTaGCACAGGGGACAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLLSMS*HRGQRS
Trigger: GCTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTCCGGTTGGCCTCTTTaGGCTCTGAAGGGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHSGWPL*ALKGKR
Trigger: TCGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGTCATGGGGAAGTGTaGGAGGAGCGTGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGHGEV*EERGVE
Trigger: TTCAACCCCACGCTCCTCCCACACTTCCCCATGACC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGCTGCAGGATCTGCTaGTGGCTCTGCTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCCRIC*WLCCGI
Trigger: GATCCCACAGCAGAGCCACCAGCAGATCCTGCAGCA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTTCTTTTCCGGGTGTTaGCTTGGCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALFFSGC*LGCRRA
Trigger: AGCCCTCCTGCAGCCAAGCCAACACCCGGAAAAGAA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGCTTGATCACTTTCTaGGGCAGGCCCGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCLITF*GRPDLS
Trigger: GGACAAGTCGGGCCTGCCCCAGAAAGTGATCAAGCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGGCTGGCCAGGAGTaGGTTACTGGGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLAGQE*VTGIKQ
Trigger: CTGTTTGATCCCAGTAACCCACTCCTGGCCAGCCAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGTTCATCGTGGAGGTaGGCGTCGAAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCSSWR*ASKGKW
Trigger: CCACTTCCCCTTCGACGCCCACCTCCACGATGAACA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCCATCATGGCTGCTTTaGTCAACCCCTCGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALPSWLL*STPRSV
Trigger: CACCGAACGAGGGGTTGACCAAAGCAGCCATGATGG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTTGGTAATCCAGATGTaGGGAGGCCGGGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLVIQM*GGRGKV
Trigger: TACCTTCCCCCGGCCTCCCCACATCTGGATTACCAA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGGTAATCCAGATGTaGGGAGGCCGGGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLVIQM*GGRGKV
Trigger: TACCTTCCCCCGGCCTCCCCACATCTGGATTACCAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGGCCATTGCCATGGTaGCTTGTGCTGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGPLPW*LVLGSG
Trigger: CCCCGACCCCAGCACAAGCCACCATGGCAATGGCCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGTGCAGGGATCTGTTaGGCTGCTGGCGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGAGIC*AAGGGG
Trigger: TCCGCCGCCGCCAGCAGCCCAACAGATCCCTGCACC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGGTTTGGCTTGCTTTaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGFGLL*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCAAAGCAAGCCAAACCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGCAGGGTCTTTGTCTaGGGAAGCAGGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGRVFV*GSRPLG
Trigger: CCCCAGGGGCCTGCTTCCCCAGACAAAGACCCTGCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGCCCGGGAGCCCACTaGCGGCCAAGACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSPGAH*RPRLPG
Trigger: TCCAGGAAGTCTTGGCCGCCAGTGGGCTCCCGGGCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGCAGCTGGGGTCTTTaGGACCCTCCACCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGSWGL*DPPPGS
Trigger: CGAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACGCGTGGGTCACAAATaGACGCACATACCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRVGHK*THIPKG
Trigger: TCCTTTGGGTATGTGCGTTCATTTGTGACCCACGCG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGGGTCATGTTCTGTTaGAGCAGCATCATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTWVMFC*SSIMLC
Trigger: GCACAACATGATGCTGCTTCAACAGAACATGACCCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGAATCCACTCATCATaGACTGGGCATCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGIHSS*TGHPKR
Trigger: CCGCTTCGGATGCCCAGTTCATGATGAGTGGATTCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCTCGTGCCTGGAGTTaGCTGTGTGCAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPRAWS*LCAAAA
Trigger: AGCTGCGGCTGCACACAGTCAACTCCAGGCACGAGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGTGGATCTTGTTGTTaGGCATGTCTTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGGSCC*ACLGTG
Trigger: CCCTGTGCCAAGACATGCTCAACAACAAGATCCACC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCCGGTTGCCGATTCCTaGAGGGCCCTCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHPVADS*RALFNL
Trigger: CAAGTTAAAGAGGGCCCTTCAGGAATCGGCAACCGG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCTGGCTCAGCGCATTaGCGCTTGGAGCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPGSAH*RLEPWR
Trigger: CCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGTGGGGTTGAACAGCTaGGACTGGATCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPVGLNS*DWIRAA
Trigger: GGCCGCCCTGATCCAGTCTCAGCTGTTCAACCCCAC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGCAGGAGGGCTGAATaGCTCTGGGAAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCRRAE*LWERES
Trigger: GCTCTCTCTTTCCCAGAGTCATTCAGCCCTCCTGCA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAACGTGTGGAGGGGCTTaGGGGGCAGATGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPTCGGA*GADGRA
Trigger: AGCTCTCCCATCTGCCCCTCAAGCCCCTCCACACGT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACGGGCGCGGGTGTTCTaGAACCAGACCTGTACCACG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRARVF*NQTCTT
Trigger: CGTGGTACAGGTCTGGTTTCAGAACACCCGCGCCCG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCCACAGCCCGGAACTaGCCTTTCCTTTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPTARN*PFLSRA
Trigger: CGCCCGGGAAAGGAAAGGTCAGTTCCGGGCTGTGGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCTGACCAGACCAGATaGCAACCGGTCTTCATACTC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALADQTR*QPVFIL
Trigger: GAGTATGAAGACCGGTTGTCATCTGGTCTGGTCAGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCAGAGAGGGGCTGTTaGGGCCGGGGAGCAACACAG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAERGC*GRGATQ
Trigger: CTGTGTTGCTCCCCGGCCTCAACAGCCCCTCTCTGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGTTGTGGGGGTGGCTaGGGGGCCATTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGCGGG*GAIAMV
Trigger: CACCATGGCAATGGCCCCTCAGCCACCCCCACAACC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCACCTTTGGAACAATaGAGGGGTCACAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALAPLEQ*RGHRGS
Trigger: ACTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCGTCGGACTTTTGGCTaGGATCCGTGTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRRTFG*DPCQTP
Trigger: AGGAGTCTGACACGGATCTCAGCCAAAAGTCCGACG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATCAGGTAATCCTTGTTaGTTTTGTGTCGCACGTCAA +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSGNPC*FCVARQ
Trigger: TTGACGTGCGACACAAAAGCAACAAGGATTACCTGA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGTCATTCGATGGTCGTaGACCGCGTGGGTCACAAAT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTVIRWS*TAWVTN
Trigger: ATTTGTGACCCACGCGGTGCACGACCATCGAATGAC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCGAAGTCCAGCCTCCTaGCCTCTGCCACGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERSPAS*PLPRWP
Trigger: GGGCCAACGTGGCAGAGGGCAGGAGGCTGGACTTCG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACTGTGGCTGAAGACCTaGTCGCCCCCTCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLWLKT*SPPPFC
Trigger: GCAGAACGGAGGGGGCGAGCAGGTCTTCAGCCACAG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCAGCCGCTGCAGCTTaGGCAGGCTCTCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAAAAA*AGSHCA
Trigger: AGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCCTTCTGCAGCCGCTaGAGCTTGCGCAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPFCSR*SLRRLS
Trigger: TGAGAGCCTGCGCAAGCTGCAGCGGCTGCAGAAGGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGCTGTGTCATGGCGTaGACCCGCAGCCGGTTCACG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPCCVMA*TRSRFT
Trigger: CGTGAACCGGCTGCGGGTGCACGCCATGACACAGCA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCTGACGCTTCAGGTTaGTTTCCTGCCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSDASG*FPASSK
Trigger: TTTGGAAGAGGCAGGAAAGCAACCTGAAGCGTCAGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCCGTGCTCCATGCTTaGAGGTGGCAAGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALAVLHA*RWQDVL
Trigger: AAGAACATCTTGCCACCTGCAAGCATGGAGCACGGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGTTGGAGAAGAGCTTaGCGCAGGAGTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCWRRA*RRSHTP
Trigger: TGGAGTGTGACTCCTGCGGCAAGCTCTTCTCCAACA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGTTGGAGAAGAGCTTaGCGCAGGAGTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCWRRA*RRSHTP
Trigger: TGGAGTGTGACTCCTGCGGCAAGCTCTTCTCCAACA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGCCTCTTGTTCTGTTaGTGGAGCAAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGLLFC*WSKVGL
Trigger: CAACCCCACCTTGCTCCAGCAACAGAACAAGAGGCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCATCGCTTGCCTCTaGTTTCGAGTTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLIACL*FRVEGG
Trigger: GCCACCTTCAACTCGAAAGCAGAGGCAAGCGATGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCTCTTCTCCTCCCGTaGCGCTGTCGTTCTCACCGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPALLLP*RCRSHR
Trigger: CCGGTGAGAACGACAGCGGCACGGGAGGAGAAGAGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGTAGTTGCCGCTGTTaGTGCTGCTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCSCRC*CCCCCC
Trigger: GCAACAGCAACAGCAGCAGCAACAGCGGCAACTACA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCCCTCGACAGGGTCTaGAGCACATTAGGCATTAAG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPLDRV*STLGIK
Trigger: CTTAATGCCTAATGTGCTCCAGACCCTGTCGAGGGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGAAGTAGTAGAAGCTaGGCCCCTCGACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRSSRS*APRQGL
Trigger: CAGACCCTGTCGAGGGGCCCAGCTTCTACTACTTCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTTGGTTCTGGTGCTGTaGCACTGTCTTTATTGGCAC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLVLVL*HCLYWH
Trigger: GTGCCAATAAAGACAGTGCCACAGCACCAGAACCAA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCATGTGTTTCTCACTaGTCATGTGAATGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTACVSH*SCECGG
Trigger: ACCTCCGCATTCACATGACCAGTGAGAAACACATGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGTGGCGGTTGTGCTaGATCTGGGTCATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRWRLC*IWVMFC
Trigger: ACAGAACATGACCCAGATCCAGCACAACCGCCACCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTGTTGAGCATGTCTTaGCACAGGGGACAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLLSMS*HRGQRS
Trigger: GCTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGAGCAAGGTCTCTGTaGTCATGGGGAAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGARSL*SWGSVG
Trigger: TCCCACACTTCCCCATGACCACAGAGACCTTGCTCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCTGGAACTCAGCGCTaGGGATGTAAAAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTAGTQR*GCKRGR
Trigger: TCTTCCCCTTTTACATCCCCAGCGCTGAGTTCCAGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCTGGAACTCAGCGCTaGGGATGTAAAAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALAGTQR*GCKRGR
Trigger: TCTTCCCCTTTTACATCCCCAGCGCTGAGTTCCAGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGTGTCAGTGCCCCGCTaGTCACAGGCAGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPVSVPR*SQAGSP
Trigger: AGGTGAGCCTGCCTGTGACCAGCGGGGCACTGACAC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCTCTCTGTATTGCTTaGCAAACCTCTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTALCIA*QTSPAV
Trigger: AACAGCTGGAGAGGTTTGCCAAGCAATACAGAGAGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGTCCTTGCTTCTCTTaGGTTTGGTTTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCPCFS*VWFGCA
Trigger: TGCACAGCCAAACCAAACCCAAGAGAAGCAAGGACA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGAGAGCTGCGAGGGACTaGGGCTTGACTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERAARD*GLTGGG
Trigger: CCCTCCCCCAGTCAAGCCCCAGTCCCTCGCAGCTCT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGCTTGAGGGGCAGATaGGAGAGCTGCGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGLRGR*ESCEGL
Trigger: CAGTCCCTCGCAGCTCTCCCATCTGCCCCTCAAGCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCTGCTCCGGGGTTATaGTCGTCCTCAAACGCTTGT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHAAPGL*SSSNAC
Trigger: ACAAGCGTTTGAGGACGACCATAACCCCGGAGCAGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGATGTCTCCCTTCATTTaGAGTCCCCCATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTMSPFI*SPPSQS
Trigger: AGACTGTGATGGGGGACTCCAAATGAAGGGAGACAT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTGAACAACTCTCTTTaGCAATCCAATGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLNNSL*QSNVIA
Trigger: GGCAATGACATTGGATTGCCAAAGAGAGTTGTTCAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGGCCATGCTTAACTTaGACTTCTTCTCTTTCGCCC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTWPCLT*TSSLSP
Trigger: GGGCGAAAGAGAAGAAGTCCAAGTTAAGCATGGCCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGATGCCCTGGAGCGCTaGATACGTGGTAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHDALER*IRGRKV
Trigger: AACCTTCCTACCACGTATCCAGCGCTCCAGGGCATC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAAGGTACCGTTGTGCTaGGCAGACCCATCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHKVPLC*ADPSGS
Trigger: CGAACCTGATGGGTCTGCCCAGCACAACGGTACCTT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAGGGGCCATTGCCATaGTGGCTTGTGCTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPEGPLP*WLVLGS
Trigger: CGACCCCAGCACAAGCCACCATGGCAATGGCCCCTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCTGCTGGTATTGCTaGTACTGCTGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLCWYC*YCCSRE
Trigger: CTCCCTACTGCAGCAGTACCAGCAATACCAGCAGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGGCCCCTGGGGGACTaGGGTTTGGCTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRPLGD*GLACFG
Trigger: CCCAAAGCAAGCCAAACCCCAGTCCCCCAGGGGCCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGTCCGTTCCTACACTaGTCAGACCACTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCPFLH*SDHCPW
Trigger: CCAAGGACAGTGGTCTGACCAGTGTAGGAACGGACA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 72 bp ACATATGCCTTGGAAATGGCTACAGACCACGGCCACTaGTCTGCCTTCTGGTTTTCACCACCACTGACTGCT +
Preference number: 4 (lower is better)
Translates to: TYALEMATDHGH*SAFWFSPPLTA
Trigger: AGCAGTCAGTGGTGGTGAAAACCAGAAGGCAGACAAGTGGCCGTGGTCTGTAGCCATTTCCAAGGCATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACGGGAAGGCCGGGTCTaGGCCTTCAAACCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPREGRV*AFKPFP
Trigger: GGGAAATGGTTTGAAGGCTCAGACCCGGCCTTCCCG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGGGTTTGATCTCCTCTaGTGCTTTTGGCCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTGFDLL*CFWPLR
Trigger: TCGAAGAGGCCAAAAGCATCAGAGGAGATCAAACCC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCTTTTCAATGGTCTTaGAAGCCAGGCTGCACTGGT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTAFQWS*KPGCTG
Trigger: ACCAGTGCAGCCTGGCTTTCAAGACCATTGAAAAGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGTCTTCCTCAACGATaGTGGTGTGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCLPQR*WCGLQP
Trigger: TGGCTGAAGACCACACCATCATCGTTGAGGAAGACA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAAGCGATGTTGGCACTaGTGGGGTTCCCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPKRCWH*WGSPEA
Trigger: CGCCTCTGGGGAACCCCATCAGTGCCAACATCGCTT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGCCTCTTTGGGCTCTaGAGGGGAAGCGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGLFGL*RGSDVG
Trigger: GCCAACATCGCTTCCCCTTCAGAGCCCAAAGAGGCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGAAACCACACCACTATaGCACGGGTTGGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALETTPL*HGLEGS
Trigger: TGAACCTTCCAACCCGTGTCATAGTGGTGTGGTTTC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGTCAAAGATGCGCTaGAACACGAGGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRSKMR*NTRLHF
Trigger: AAAGTGCAGCCTCGTGTTTCAGCGCATCTTTGACCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCCAAAAACTGGGGGTaGATGAACTGGTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSKNWG*MNWFWA
Trigger: TGCCCAGAACCAGTTCATTCACCCCCAGTTTTTGGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCTGACCAGACCAGATaGCAACCGGTCTTCATACTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHADQTR*QPVFIL
Trigger: GAGTATGAAGACCGGTTGTCATCTGGTCTGGTCAGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGAGCTCGGGGCTGGGCTaGCCAGACCAGATGACAACC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESSGLG*PDQMTT
Trigger: GGTTGTCATCTGGTCTGGTCAGCCCAGCCCCGAGCT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGGGTCCGCGAGGCTTaGGGTTTCACTGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGVREA*GFTVVH
Trigger: GTGGACTACAGTGAAACCTCAAGCCTCGCGGACCCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAAAGTGTTGATGATCTaGGGGTACACGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTKVLMI*GYTGAA
Trigger: TGCTGCACCCGTGTACCCGCAGATCATCAACACTTT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACAGCCTCCTGCCCTCTaGCACGTTGGCCCTGACGCC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRQPPAL*HVGPDA
Trigger: GGCGTCAGGGCCAACGTGGCAGAGGGCAGGAGGCTG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCCACTCTCATGCTGCTaGAGGTGCTTGTACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHPLSCC*RCLYSF
Trigger: GAAGCTGTACAAGCACCTGCAGCAGCATGAGAGTGG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCTTGGTGGAGTAGTTaGACAGGACACAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPWWSS*TGHSGS
Trigger: ACTACCACTGTGTCCTGTGCAACTACTCCACCAAGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACTCTCACTGCGCTGGTaGTTCATGGAGCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLSLRW*FMERTC
Trigger: GCACGTGCGCTCCATGAAGCACCAGCGCAGTGAGAG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGAGGGCGGCCTGTTGCTaGAGCTCCTGCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERAACC*SSCCRC
Trigger: ACACCTGCAGCAGGAGCTGCAGCAACAGGCCGCCCT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCCATCTCTTTGATCTaGTCCTCACTGGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHAISLI*SSLGEL
Trigger: CAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCGCTCTCCGTCTTTaGCCTCCCCCTGATTCTCGT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPAALRL*PPPDSR
Trigger: ACGAGAATCAGGGGGAGGGCAAAGACGGAGAGCGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTCATCGCTTGCCTCTaGTTTCGAGTTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLIACL*FRVEGG
Trigger: GCCACCTTCAACTCGAAAGCAGAGGCAAGCGATGAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCATTGCCATCATGGCTaGTTTGGTCAACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALHCHHG*FGQPLV
Trigger: AACGAGGGGTTGACCAAAGCAGCCATGATGGCAATG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCAACACAGGAGGGATaGCCTGGAGCGCTGGATACG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPATQEG*PGALDT
Trigger: CGTATCCAGCGCTCCAGGGCATCCCTCCTGTGTTGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCTCGCTGGTGTCGCTaGCGCTCTCCTCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPRWCR*RSPLAG
Trigger: CCCTGCGAGAGGAGAGCGCCAGCGACACCAGCGAGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGTACGCGGAGCCGTCTaGCTGGTAGACGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEVRGAV*LVDDLP
Trigger: GGGGAGATCGTCTACCAGCCAGACGGCTCCGCGTAC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCTTTGCCAATCCCTTaGATGATAGCGGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSLPIP*MIAEMF
Trigger: GAACATCTCCGCTATCATCCAAGGGATTGGCAAAGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAAGCAGCGGCTACGGCTaGGAGGGCCTCCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSSGYG*EGLLPF
Trigger: GAAGGGGAGGAGGCCCTCCCAGCCGTAGCCGCTGCT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTCCTCCAGGTCATTTaGAAAGAGTCCTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLLQVI*KESFAA
Trigger: GGCTGCAAAGGACTCTTTCCAAATGACCTGGAGGAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGGTGGCGGTTGTGCTaGATCTGGGTCATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRWRLC*IWVMFC
Trigger: ACAGAACATGACCCAGATCCAGCACAACCGCCACCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGAAGAGCTTCAGCGATaGGTCGTTGGTCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTEELQR*VVGLDE
Trigger: TTCATCCAGACCAACGACCCATCGCTGAAGCTCTTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTGCAGACGGCACATTaGAAGAGCTTCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLQTAH*KSFSDG
Trigger: CCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGGTGCAGCTGGAGGTaGATCTTGTTGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALRCSWR*ILLLSM
Trigger: CATGCTCAACAACAAGATCCACCTCCAGCTGCACCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTCCATGCTTGCAGGTaGCAAGATGTTCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLHACR*QDVLSR
Trigger: CCGGGAAAGAACATCTTGCCACCTGCAAGCATGGAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAAAGCCAGGCTGCACTaGTTGCAGCGGTACTTATAC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALKARLH*LQRYLY
Trigger: GTATAAGTACCGCTGCAACCAGTGCAGCCTGGCTTT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGTCTGCATCATCAGTaGCGAGAAGATGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCLHHQ*REDGQL
Trigger: GAGCTGCCCATCTTCTCGCCACTGATGATGCAGACA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGGCAGAGTCTGCAGTaGCATTGTCTGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTWQSLQ*HCLHHQ
Trigger: CTGATGATGCAGACAATGCCACTGCAGACTCTGCCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTCTTGTTCTGTTGCTaGAGCAAGGTGGGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLLFCC*SKVGLS
Trigger: GCTCAACCCCACCTTGCTCCAGCAACAGAACAAGAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGCATCTCTGGCTTTaGCTGTCCTTGCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLHLWL*LSLLLL
Trigger: CAAGAGAAGCAAGGACAGCCAAAGCCAGAGATGCAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCTTCAGCTGCAGATTaGTCATTTGAGTGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPSAAD*SFECEN
Trigger: GTTTTCGCACTCAAATGACCAATCTGCAGCTGAAGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGAGGGGCCATTGCCATaGTGGCTTGTGCTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEEGPLP*WLVLGS
Trigger: CGACCCCAGCACAAGCCACCATGGCAATGGCCCCTC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTCCTTTCTCCTTCTTaGGGACGGGGAGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELLSPS*GRGGAP
Trigger: GGGAGCCCCTCCCCGTCCCCAAGAAGGAGAAAGGAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGTTTGGGGGATTCTTTaGCAGGGTCTTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHVWGIL*QGLCLG
Trigger: CCCCAGACAAAGACCCTGCCAAAGAATCCCCCAAAC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATCGCACGCCAGGCAGTaGTACGAGCCGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSHARQ*YEPPPP
Trigger: TGGCGGAGGCGGCTCGTACCACTGCCTGGCGTGCGA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGCAGCTGGGGTCTTTaGGACCCTCCACCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGSWGL*DPPPGS
Trigger: CGAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGTCCTTGGGGCAGCTaGGGTCTTTGGGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPCPWGS*GLWDPP
Trigger: TGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGGGTCATGTTCTGTTaGAGCAGCATCATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALWVMFC*SSIMLC
Trigger: GCACAACATGATGCTGCTTCAACAGAACATGACCCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGTCGTTGGTCTGGATaGAGCTCTCGCCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGRWSG*SSRPGS
Trigger: TGAACCTGGGCGAGAGCTTCATCCAGACCAACGACC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCAGCAGAGGAAGCCTaGGTCTTCTCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPAEEA*VFSPAA
Trigger: AGCTGCGGGAGAGAAGACTCAGGCTTCCTCTGCTGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCTGGCTCAGCGCATTaGCGCTTGGAGCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPGSAH*RLEPWR
Trigger: CCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGTCGAGACCGGATATaGGCCTCCAGGGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPCRDRI*ASRAVL
Trigger: CAAGACAGCCCTGGAGGCTCATATCCGGTCTCGACA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCAGAGAGGGGCTGTTaGGGCCGGGGAGCAACACAG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRAERGC*GRGATQ
Trigger: CTGTGTTGCTCCCCGGCCTCAACAGCCCCTCTCTGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAAGGAACTGGCTCGTaGGCAAAGCTGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPEGTGS*AKLWGL
Trigger: CAGACCCCACAGCTTTGCTCACGAGCCAGTTCCTTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGCCGACTCGAGATGCTaGCTCAGCGCTTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQADSRC*LSASSP
Trigger: CGGGGAGGAAGCGCTGAGTCAGCATCTCGAGTCGGC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACTGTGGGCTGCTCCATaGTACTGGGTTTGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLWAAP*YWVCRG
Trigger: TCCCCGACAAACCCAGTAGCATGGAGCAGCCCACAG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTGCGGGTACACGGGTaGAGCACACGAAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLRVHG*STRRVP
Trigger: GGGGACCCTTCGTGTGCTGCACCCGTGTACCCGCAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGGAAAGAGTCCTTTaGAGCCCTCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLERVL*SPPLPL
Trigger: AAGAGGAAGAGGAGGGCTGCAAAGGACTCTTTCCAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCCCCTGGCTCCGGGTaGTTCTCCTTCATGTGCGCC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPPGSG*FSFMCA
Trigger: GGCGCACATGAAGGAGAAGCACCCGGAGCCAGGGGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCCAGGTGGCGGTTGTaGTGGATCTGGGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPRWRL*WIWVMF
Trigger: GAACATGACCCAGATCCAGCACAACCGCCACCTGGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCGCTCCACGTTCATGTaGAGCCCCAGCATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERSTFM*SPSMSR
Trigger: CCTGGACATGCTGGGGCTGCACATGAACGTGGAGCG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGACACTGGTACATCTaGTCGGGTTTGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGHWYI*SGLISS
Trigger: AGAGGAGATCAAACCCGAGCAGATGTACCAGTGTCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACAGCGTTGCTATACTTaGAGTAGGGACACTGGTACA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTQRCYT*SRDTGT
Trigger: TGTACCAGTGTCCCTACTGCAAGTATAGCAACGCTG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCTGACGCTTCAGGTTaGTTTCCTGCCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSDASG*FPASSK
Trigger: TTTGGAAGAGGCAGGAAAGCAACCTGAAGCGTCAGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCCCGCCGTGCTCCATaGTTGCAGGTGGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPRRAP*LQVARC
Trigger: ACATCTTGCCACCTGCAAGCATGGAGCACGGCGGGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAGCCTGAATCCTCCTaGACTGACCCAGAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPEPESS*TDPESL
Trigger: CAGCGACTCTGGGTCAGTGCAGGAGGATTCAGGCTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACTCCTGCTGCAGGTGTaGCTGGACTTGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRLLLQV*LDLRLG
Trigger: GCCCAGGCGCAAGTCCAGGCACACCTGCAGCAGGAG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGCTGCAGCTCCTGCTaGAGGTGTGCCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECCSSC*RCAWTC
Trigger: GCAAGTCCAGGCACACCTGCAGCAGGAGCTGCAGCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGGTGCTGCTGCTGCTaGAGCTGGAGCAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRCCCC*SWSKVS
Trigger: AGAGACCTTGCTCCAGCTGCAGCAGCAGCAGCACCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGCTGCTGCAGGATCTaGTGGTGGCTCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECCCRI*WWLCCG
Trigger: CCCACAGCAGAGCCACCAGCAGATCCTGCAGCAGCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGTGTTTCTGAACCAGTaGTTGATCACTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTVFLNQ*LITFWG
Trigger: GCCCCAGAAAGTGATCAAGCACTGGTTCAGAAACAC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCCGCTCTCCGTCTTTaGCCTCCCCCTGATTCTCGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAALRL*PPPDSR
Trigger: ACGAGAATCAGGGGGAGGGCAAAGACGGAGAGCGGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGTTTGGTTTGGCTGTaGACTGGGAGGGTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGLVWL*TGRVGL
Trigger: CAGGCCGACCCTCCCAGTGCACAGCCAAACCAAACC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAGCTTGGGCTGGGGTaGGTTTGTCTTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPELGLG*VCLLLQ
Trigger: CTGGAGCAGAAGACAAACGCACCCCAGCCCAAGCTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGAGGGAGTCCGCACTTaGACTTTTGCTTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHEGVRT*TFAFCF
Trigger: GAAGCAGAAAGCAAAAGTGCAAGTGCGGACTCCCTC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCAGACCAACTTGTACTaGACCTTTGGAACAATGAAG +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTQTNLY*TFGTMK
Trigger: CTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGCCCGCCTGGCACTTaGGGCAGACCAACTTGTACT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSPPGT*GRPTCT
Trigger: AGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAATTGTTCTGTGTTTGTaGAAGGCCGACTCGAGATGC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTIVLCL*KADSRC
Trigger: GCATCTCGAGTCGGCCTTGCACAAACACAGAACAAT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGTAATAAACTAGGGTaGTCTTTGGCGTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGNKLG*SLAFLA
Trigger: AGCAAGAAACGCCAAAGAGCACCCTAGTTTATTACC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAATACGCAGGAGCTTTTaGCAGAACCATCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTIRRSF*QNHRCS
Trigger: TGAACAGCGATGGTTCTGCCAAAAGCTCCTGCGTAT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTCAGGGTCATTCGATaGTCGTGCACCGCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELRVIR*SCTAWV
Trigger: GACCCACGCGGTGCACGACCATCGAATGACCCTGAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTTGGTTCTGGTGCTGTaGCACTGTCTTTATTGGCAC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLVLVL*HCLYWH
Trigger: GTGCCAATAAAGACAGTGCCACAGCACCAGAACCAA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCTGTGCTTTCATTTaGTTCTGGTGCTGTGGCACT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALLCAFI*FWCCGT
Trigger: AGTGCCACAGCACCAGAACCAAATGAAAGCACAGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGACCGTGTCACATTTaGGGCACTCCACACCGCTAC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGPCHI*GTPHRY
Trigger: GTAGCGGTGTGGAGTGCCCCAAATGTGACACGGTCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGTTCCTGGCCACGTTaGTCTCGTAGTCGCACACCT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGSWPR*SRSRTP
Trigger: AGGTGTGCGACTACGAGACCAACGTGGCCAGGAACC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCCTGTAGGATCCAGCTaGAATCCACTCATCATGAAC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALPVGSS*NPLIMN
Trigger: GTTCATGATGAGTGGATTCCAGCTGGATCCTACAGG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCTGTAGGATCCAGCTaGAATCCACTCATCATGAAC +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPVGSS*NPLIMN
Trigger: GTTCATGATGAGTGGATTCCAGCTGGATCCTACAGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGATGGGTCGTTGGTCTaGATGAAGCTCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPDGSLV*MKLSPR
Trigger: CCTGGGCGAGAGCTTCATCCAGACCAACGACCCATC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGGTGCAGCTGGAGGTaGATCTTGTTGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRCSWR*ILLLSM
Trigger: CATGCTCAACAACAAGATCCACCTCCAGCTGCACCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCTGACACGGGCAGCTaGGGCCTCTTGGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSDTGS*GLLACT
Trigger: GGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTAACTTCTTCCGGTTaGCCTCTTTGGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLTSSG*PLWALK
Trigger: CTTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGTCTTTCTTCTCTTTaGCCTTCGAGGCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSLSSL*PSRHLA
Trigger: TGCCAGATGCCTCGAAGGCCAAAGAGAAGAAAGACT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCAGAATCAAGATGTTaGAGAAGAGCTTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSESRC*RRACRR
Trigger: CCTGCGGCAAGCTCTTCTCCAACATCTTGATTCTGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCGGTGCCGAAGATTTaGTTTCAGTCGCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSVPKI*FQSLFL
Trigger: CAGGAATAGCGACTGAAACCAAATCTTCGGCACCGA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAAGTGCACTCGGTCTTaGGTCCCTCATAACTCGTTT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTKCTRS*VPHNSF
Trigger: AAACGAGTTATGAGGGACCCAAGACCGAGTGCACTT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGTTGCTGTAGCCGCTaGAGGGGCCTCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGCCSR*RGLSFL
Trigger: GAGAAAGGAGAGGCCCCTCCAGCGGCTACAGCAACC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 72 bp CACATTAACGTAAACACGCGTGCCTCGCGCACGGGCTaGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HINVNTRASRTG*LLCSLYIAICF
Trigger: AAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTGCGCGAGGCACGCGTGTTTACGTTAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGCACTCGTTGCAGCTaGCCTCCTTGCTGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSTRCS*PPCWRA
Trigger: AGCCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACCTCGTGCCTGGAGTTaGCTGTGTGCAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRPRAWS*LCAAAA
Trigger: AGCTGCGGCTGCACACAGTCAACTCCAGGCACGAGG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGCACCTGCGGATGGTaGAGATCTGGCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGTCGW*RSGPGP
Trigger: AGGACCTGGGCCAGATCTTCACCATCCGCAGGTGCC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAACATGGTGGCGGCTCTaGTCACGTGGTACTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPTWWRL*SRGTES
Trigger: ACTCTCAGTACCACGTGATCAGAGCCGCCACCATGT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGTGGGGTTGAACAGCTaGGACTGGATCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRVGLNS*DWIRAA
Trigger: GGCCGCCCTGATCCAGTCTCAGCTGTTCAACCCCAC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGCTCACCTCAGGGTTaGGCTGGAACTCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGSPQG*AGTQRW
Trigger: CCAGCGCTGAGTTCCAGCTCAACCCTGAGGTGAGCC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGAGCTGGTCATCCGTaGTCCTGGTGCGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGAGHP*SWCEAS
Trigger: AGAGGCCTCGCACCAGGATCACGGATGACCAGCTCC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACGAAGGGGAAGTGGCTaGGCTCGCTGGGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRRGSG*ARWDLR
Trigger: CCTCAGATCCCAGCGAGCTCAGCCACTTCCCCTTCG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACGGGCGCGGGTGTTCTaGAACCAGACCTGTACCACG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRRARVF*NQTCTT
Trigger: CGTGGTACAGGTCTGGTTTCAGAACACCCGCGCCCG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGCAGATTGGTCATTTaGGTGCGAAAACGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALCRLVI*VRKRFC
Trigger: GCAGAAACGTTTTCGCACTCAAATGACCAATCTGCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTAGTCATTAAAGCATaGCTTGAGGACCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALVVIKA*LEDLQL
Trigger: CAGCTGAAGGTCCTCAAGTCATGCTTTAATGACTAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTCTCGCCTGTGGGCTaGTCCATGCTACTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELSPVG*SMLLGL
Trigger: CAAACCCAGTAGCATGGAGCAGCCCACAGGCGAGAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAAATGGGTTTCCTCTTaGCGTAGAGCACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALKWVSS*RRAQSH
Trigger: ATGGCTTTGTGCTCTACGGCAAGAGGAAACCCATTT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACAAGGTTCAAGAGGGTaGTGGGGGTCAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPQGSRG*WGSRDQ
Trigger: CTGGTCTCTTGACCCCCAGCACCCTCTTGAACCTTG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTGGAAAGAGTCCTTTaGAGCCCTCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLERVL*SPPLPL
Trigger: AAGAGGAAGAGGAGGGCTGCAAAGGACTCTTTCCAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGCAGCATCATGTTGTaGATGTGTTTCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSSIML*MCFSLV
Trigger: GACCAGTGAGAAACACATGCACAACATGATGCTGCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTGGAGTTGACTGTGTaGAGCCGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELELTV*SRSFSR
Trigger: CCTGGAGAAGCTGCGGCTGCACACAGTCAACTCCAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCCACGCCACTCTCATaGTGCTGCAGGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSTPLS*CCRCLY
Trigger: GTACAAGCACCTGCAGCAGCATGAGAGTGGCGTGGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACCCTTCTGCAGCCGCTaGAGCTTGCGCAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRPFCSR*SLRRLS
Trigger: TGAGAGCCTGCGCAAGCTGCAGCGGCTGCAGAAGGG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGCTGTGTCATGGCGTaGACCCGCAGCCGGTTCACG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCCVMA*TRSRFT
Trigger: CGTGAACCGGCTGCGGGTGCACGCCATGACACAGCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGGAGGTGGGTGAGGTaGAGCTGGAGGTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEWRWVR*SWRWIL
Trigger: CAAGATCCACCTCCAGCTGCACCTCACCCACCTCCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTCAGGTTGCTTTCCTaGCTCTTCCAAAGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTFRLLS*LFQSGV
Trigger: AACTCCACTTTGGAAGAGGCAGGAAAGCAACCTGAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTGACCCAGAGTCGCTaGCTGTCGGGCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELTQSR*LSGSAY
Trigger: ATAAGCAGAGCCCGACAGGCAGCGACTCTGGGTCAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGCCTCCAGCTTGGCTaGCCGTGCCTTGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSLQLG*PCLGLV
Trigger: CACCAGACCAAGGCACGGGCAGCCAAGCTGGAGGCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCGAGTGTCTGGGCTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRASVWA*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGTGTTTCTGAACCAGTaGTTGATCACTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHVFLNQ*LITFWG
Trigger: GCCCCAGAAAGTGATCAAGCACTGGTTCAGAAACAC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGATTGGTCATTTGAGTaGGAAAACGTTTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALDWSFE*ENVSAQ
Trigger: CTGGGCAGAAACGTTTTCGCACTCAAATGACCAATC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCCTTACGTTGCTGCTaGGGGGTCAGCTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESLRCC*GVSCGA
Trigger: TGCACCACAGCTGACCCCGCAGCAGCAACGTAAGGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGCAGGTACCCACTCTaGAGGGCGCCAGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCRYPL*RAPGIW
Trigger: CCAGATCCCTGGCGCCCTGCAGAGTGGGTACCTGCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTTGGCGTTTCTTGCTaGTCTCGTGATTGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTFGVSC*SRDCSV
Trigger: CACAGAACAATCACGAGAGCAGCAAGAAACGCCAAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCTTTGCCAATCCCTTaGATGATAGCGGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSLPIP*MIAEMF
Trigger: GAACATCTCCGCTATCATCCAAGGGATTGGCAAAGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGTCAAGAGACCAGCCTaGGGCTGCTCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRVKRPA*GCSGPA
Trigger: TGCTGGCCCTGAGCAGCCCCAGGCTGGTCTCTTGAC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGACCGTGTCACATTTaGGGCACTCCACACCGCTAC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGPCHI*GTPHRY
Trigger: GTAGCGGTGTGGAGTGCCCCAAATGTGACACGGTCC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATACGAGAATGCATCATaGTCATGTGGCCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPYENAS*SCGRPA
Trigger: CGCTGGGCGGCCACATGACCATGATGCATTCTCGTA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCTTCTCCAGGCTATTaGTGTAGTAGTCACAAGCGT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHASPGY*CSSHKR
Trigger: ACGCTTGTGACTACTACACCAATAGCCTGGAGAAGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACGCTCCCCTGGTCTTTaGCCAGCTCCTCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRSPGL*PAPLGQ
Trigger: CTGACCCAGAGGAGCTGGCCAAAGACCAGGGGAGCG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCGCTGCCGCTCCCCTaGTCTTTGGCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSLPLP*SLASSS
Trigger: AGAGGAGCTGGCCAAAGACCAGGGGAGCGGCAGCGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCAGGTGCCACGCTGTaGAGGTGGGTGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSGATL*RWVRCS
Trigger: GCTGCACCTCACCCACCTCCACAGCGTGGCACCTGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACTGCCTCTTCCAAAGTaGAGTTCCCATCTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLPLPK*SSHLGP
Trigger: CGGACCGAGATGGGAACTCCACTTTGGAAGAGGCAG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCCAGCGTGGAACTCTaGCTGTACGCCACGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSSVEL*LYATLQ
Trigger: TTGCAACGTGGCGTACAGCCAGAGTTCCACGCTGGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGTCATGGGGAAGTGTaGGAGGAGCGTGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGHGEV*EERGVE
Trigger: TTCAACCCCACGCTCCTCCCACACTTCCCCATGACC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGACCTCAGGGTTGAGCTaGAACTCAGCGCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEETSGLS*NSALGM
Trigger: CATCCCCAGCGCTGAGTTCCAGCTCAACCCTGAGGT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGCAGGATCTGCTGGTaGCTCTGCTGTGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECRICW*LCCGIW
Trigger: CCAGATCCCACAGCAGAGCCACCAGCAGATCCTGCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGTCCTTGCTTCTCTTaGGTTTGGTTTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCPCFS*VWFGCA
Trigger: TGCACAGCCAAACCAAACCCAAGAGAAGCAAGGACA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGCTTGAGGGGCAGATaGGAGAGCTGCGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGLRGR*ESCEGL
Trigger: CAGTCCCTCGCAGCTCTCCCATCTGCCCCTCAAGCC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACCGAGAGCAGCTGGCTaGCCAGGAGTGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRPRAAG*PGVGYW
Trigger: CCAGTAACCCACTCCTGGCCAGCCAGCTGCTCTCGG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCGAGAGCAGCTGGCTaGCCAGGAGTGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPRAAG*PGVGYW
Trigger: CCAGTAACCCACTCCTGGCCAGCCAGCTGCTCTCGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACACCGGGGCTCGCACTaGCCTTTTCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRHRGSH*PFPPAS
Trigger: GGAAGCTGGAGGAAAAGGCCAGTGCGAGCCCCGGTG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCACAGTCTAAGAGCATaGCAGACAGAGTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHHSLRA*QTESGC
Trigger: ACAACCTGACTCTGTCTGCCATGCTCTTAGACTGTG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCATCATGGCTGCTTTaGTCAACCCCTCGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPSWLL*STPRSV
Trigger: CACCGAACGAGGGGTTGACCAAAGCAGCCATGATGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACGAATAGTCGTCTGTTaGCATCGAGGGCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRIVVC*HRGLNP
Trigger: GGGGTTCAGCCCTCGATGCCAACAGACGACTATTCG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCAGACCACTGTCCTTaGGGCAGCTGGGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESDHCP*GSWGLW
Trigger: CCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACGCGTGGGTCACAAATaGACGCACATACCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRVGHK*THIPKG
Trigger: TCCTTTGGGTATGTGCGTTCATTTGTGACCCACGCG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGTGGATCTTGTTGTTaGGCATGTCTTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGGSCC*ACLGTG
Trigger: CCCTGTGCCAAGACATGCTCAACAACAAGATCCACC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGCAGGATATTCTTTTaGGTGAAGGATTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSRIFF*VKDSLQ
Trigger: CTGCAAGGAATCCTTCACTCAAAAGAATATCCTGCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGCAGGATATTCTTTTaGGTGAAGGATTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSRIFF*VKDSLQ
Trigger: CTGCAAGGAATCCTTCACTCAAAAGAATATCCTGCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCGGTTGCCGATTCCTaGAGGGCCCTCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPVADS*RALFNL
Trigger: CAAGTTAAAGAGGGCCCTTCAGGAATCGGCAACCGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCGAGGCATCTGGCAGTaGTTCCTTTGGTCCCGTGTT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERGIWQ*FLWSRV
Trigger: AACACGGGACCAAAGGAATCACTGCCAGATGCCTCG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGATTCCCCCTGGCATCTaGAGCAATGCGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEIPPGI*SNAWRK
Trigger: CTTCCTCCACGCATTGCTTCAGATGCCAGGGGGAAT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGAAACGCTTGTCTCTCTaGGGCTCTTCTCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEKRLSL*GSSPPV
Trigger: CACGGGAGGAGAAGAGCCTCAGAGAGACAAGCGTTT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCCTCGCGCTGTACTTaGTGCCACACAAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEASRCT*CHTKCT
Trigger: AGTGCACTTTGTGTGGCATCAAGTACAGCGCGAGGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTGCCGGTGGGGACATaGAGCACCATCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLPVGT*STISCR
Trigger: CCTGCAAGAGATGGTGCTTCATGTCCCCACCGGCAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCAGGTAATCCTTGTTaGTTTTGTGTCGCACGTCAA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALSGNPC*FCVARQ
Trigger: TTGACGTGCGACACAAAAGCAACAAGGATTACCTGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCATGCTGCTGCAGGTaGTTGTACAGCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSCCCR*LYSFRL
Trigger: CAGCCTGAAGCTGTACAAGCACCTGCAGCAGCATGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATTCATGGAGCGCACGTaGTGGATGAGGTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPFMERT*WMRLSL
Trigger: CAAGCTCAACCTCATCCAGCACGTGCGCTCCATGAA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATACCCGGGAAGGAGGTaGGTTTGGTGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRYPGRR*VWWLQG
Trigger: CCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACCCCGCCGTGCTCCATaGTTGCAGGTGGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRPRRAP*LQVARC
Trigger: ACATCTTGCCACCTGCAAGCATGGAGCACGGCGGGG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACGTGCCTTGGTCTGGTaGAGCACAGACCGCATGTGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRALVW*STDRMW
Trigger: CCACATGCGGTCTGTGCTGCACCAGACCAAGGCACG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGTTGCCAGTCCCGTTaGTGTTCCCACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECCQSR*CSHLQP
Trigger: AGGCTGCAAGTGGGAACAGCAACGGGACTGGCAACA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATGCTGCTGCTGCTGCTaGAGGATCTGCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQCCCCC*RICWWL
Trigger: GAGCCACCAGCAGATCCTGCAGCAGCAGCAGCAGCA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGCCTCTTGTTCTGTTaGTGGAGCAAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGLLFC*WSKVGL
Trigger: CAACCCCACCTTGCTCCAGCAACAGAACAAGAGGCC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCATCTCTTTGATCTaGTCCTCACTGGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPAISLI*SSLGEL
Trigger: CAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCTGAAACACGAGGCTaGACTTTTTGCACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHAETRG*TFCTGN
Trigger: ATTACCAGTGCAAAAAGTGCAGCCTCGTGTTTCAGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCTCTCTTGGCTTCGTaGCAGTGTCGAGACCGGATA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEALLAS*QCRDRI
Trigger: TATCCGGTCTCGACACTGGCACGAAGCCAAGAGAGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGCTGCTCCATGCTACTaGGTTTGTCGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQAAPCY*VCRGGG
Trigger: CCCACCTCCCCGACAAACCCAGTAGCATGGAGCAGC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGTAGGTCTGGAGGCTaGAAAAGGAGGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPCRSGG*KRRLST
Trigger: AGTGCTCAGCCTCCTTTTCCAGCCTCCAGACCTACA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCGCTCTGGGCCAGCTaGCTCAGGCTCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPLWAS*LRLSTM
Trigger: CATTGTTGAGAGCCTGAGCCAGCTGGCCCAGAGCGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGAAACACATCAAAATaGGTTTCCTCTTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALGNTSK*VSSCRR
Trigger: TCTACGGCAAGAGGAAACCCATTTTGATGTGTTTCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCTTTCATTTGGTTCTaGTGCTGTGGCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHAFIWF*CCGTVF
Trigger: AAAGACAGTGCCACAGCACCAGAACCAAATGAAAGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGACCGCCACGTGGGTTTaGTTTTTGGTTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEETATWV*FLVWWG
Trigger: CCCCCACCAAACCAAAAACCAAACCCACGTGGCGGT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGTTTGGCTGTGCACTaGGAGGGTCGGCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGLAVH*EGRPAL
Trigger: CAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCTCACACTCCAGCATaGTGGGTGTCCTGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPHTPA*WVSCSH
Trigger: ATGACTACAGGACACCCACCATGCTGGAGTGTGAGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGATGCCCTGGAGCGCTaGATACGTGGTAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEDALER*IRGRKV
Trigger: AACCTTCCTACCACGTATCCAGCGCTCCAGGGCATC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACATGGTGGCTTGTGCTaGGGTCGGGGAACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQHGGLC*GRGTQR
Trigger: TCGCTGAGTTCCCCGACCCCAGCACAAGCCACCATG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCCTGCAGACTCTGCTaGTATTGCTGGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSCRLC*YCWYCC
Trigger: GCAGCAGTACCAGCAATACCAGCAGAGTCTGCAGGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGTCCGTCGGACTTTTaGCTGAGATCCGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGPSDF*LRSVSD
Trigger: GTCTGACACGGATCTCAGCCAAAAGTCCGACGGACC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGAGTCCTTGCCCTCTaGGGATTTGGTAGGACTAGA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRVLAL*GFGRTR
Trigger: TCTAGTCCTACCAAATCCTCAGAGGGCAAGGACTCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGAAATGCTTTGGTTTaGGAGAGCAAGGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRNALV*ESKVLF
Trigger: AAAAAGGACCTTGCTCTCTCAAACCAAAGCATTTCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGCACTTGGGGCACTTaGGCGTCTTACACGAGTTAC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECTWGT*ASYTSY
Trigger: GTAACTCGTGTAAGACGCTCAAGTGCCCCAAGTGCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGTCGTTGGTCTGGATaGAGCTCTCGCCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGRWSG*SSRPGS
Trigger: TGAACCTGGGCGAGAGCTTCATCCAGACCAACGACC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACGATGGCCACACACTTaGGCCTCCACTCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRWPHT*ASTHWP
Trigger: AGGCCAATGAGTGGAGGCTCAAGTGTGTGGCCATCG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAAACCACACCACTATaGCACGGGTTGGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPETTPL*HGLEGS
Trigger: TGAACCTTCCAACCCGTGTCATAGTGGTGTGGTTTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGGGATCAAACAGCATaGAAGGCATGTCCAACGACC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPWDQTA*KACPTT
Trigger: GGTCGTTGGACATGCCTTTCATGCTGTTTGATCCCA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGTCGAGACCGGATATaGGCCTCCAGGGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCRDRI*ASRAVL
Trigger: CAAGACAGCCCTGGAGGCTCATATCCGGTCTCGACA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGGAGATATGCTGTTaGGAAAAGATATGGTCACGT +
Preference number: 4 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLEICC*EKIWSR
Trigger: ACGTGACCATATCTTTTCTCAACAGCATATCTCCAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCACCTTTGGAACAATaGAGGGGTCACAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAPLEQ*RGHRGS
Trigger: ACTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGAGCAAGGTCCTTTTTaGTGCTACCACCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQEQGPF*CYHLRG
Trigger: CCCCCGCAGGTGGTAGCAGCAAAAAGGACCTTGCTC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGTTCACGTCAGCGTTaGTATACTTGCAGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGSRQR*YTCSRD
Trigger: GTCCCTACTGCAAGTATAGCAACGCTGACGTGAACC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTGACCCAGAGTCGCTaGCTGTCGGGCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLTQSR*LSGSAY
Trigger: ATAAGCAGAGCCCGACAGGCAGCGACTCTGGGTCAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGTTGCTGTTCCCACTTaGAGCCTCCAGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRVAVPT*SLQLGC
Trigger: GCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAAC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATGTTGCTGCAGCTCCTaGTGCAGGTGTGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQCCCSS*CRCAWT
Trigger: AGTCCAGGCACACCTGCAGCAGGAGCTGCAGCAACA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGTTGCTGCAGCTCCTaGTGCAGGTGTGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCCCSS*CRCAWT
Trigger: AGTCCAGGCACACCTGCAGCAGGAGCTGCAGCAACA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAAGAGGAGGTGCTGCTaGTGCTGCAGCTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQKRRCC*CCSWSK
Trigger: CTTGCTCCAGCTGCAGCAGCAGCAGCACCTCCTCTT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATTCTCGAGGACCGCTTaGTCCCCCAGTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRFSRTA*SPSTPA
Trigger: AGCAGGAGTACTGGGGGAGCAAGCGGTCCTCGAGAA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGTGCGTTTGTCTTCTaGTCCAGCTGCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGAFVF*SSCSSC
Trigger: GCAGCTGGAGCAGCTGGAGCAGAAGACAAACGCACC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGAGCTTGGGCTGGGGTaGGTTTGTCTTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRELGLG*VCLLLQ
Trigger: CTGGAGCAGAAGACAAACGCACCCCAGCCCAAGCTC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAACAGCTCCATGGTTTTaGTCACGGGCGAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRTAPWF*SRARGA
Trigger: TGCCCCTCTCGCCCGTGAGCAAAACCATGGAGCTGT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCAAAATGCTTGGCCATaGTTAACTTGGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PRLINSGFNACRLFYFALQNAWP*LTWTSS
Trigger: AGAAGAAGTCCAAGTTAAGCATGGCCAAGCATTTTG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGGAAGGTACCGTTGTaGTGGGCAGACCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGKVPL*WADPSG
Trigger: ACCTGATGGGTCTGCCCAGCACAACGGTACCTTCCC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGACTGGGGTTTGGCTTaGTTTGGGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQDWGLA*FGLLLL
Trigger: CAGCAGCAGCAGCCCAAAGCAAGCCAAACCCCAGTC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGTAATAAACTAGGGTaGTCTTTGGCGTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGNKLG*SLAFLA
Trigger: AGCAAGAAACGCCAAAGAGCACCCTAGTTTATTACC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGAAACACATCAAAATaGGTTTCCTCTTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGNTSK*VSSCRR
Trigger: TCTACGGCAAGAGGAAACCCATTTTGATGTGTTTCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGTTCAAGAGGGTGCTaGGGGTCAAGAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGSRGC*GSRDQP
Trigger: AGGCTGGTCTCTTGACCCCCAGCACCCTCTTGAACC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCCCTCGACAGGGTCTaGAGCACATTAGGCATTAAG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPLDRV*STLGIK
Trigger: CTTAATGCCTAATGTGCTCCAGACCCTGTCGAGGGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGTTCCTGGCCACGTTaGTCTCGTAGTCGCACACCT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGSWPR*SRSRTP
Trigger: AGGTGTGCGACTACGAGACCAACGTGGCCAGGAACC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCACTCATCATGAACTaGGCATCCGAAGCGGTACTG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPLIMN*ASEAVL
Trigger: CAGTACCGCTTCGGATGCCCAGTTCATGATGAGTGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGATGGGTCGTTGGTCTaGATGAAGCTCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRDGSLV*MKLSPR
Trigger: CCTGGGCGAGAGCTTCATCCAGACCAACGACCCATC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTTGCAGACGGCACATTaGAAGAGCTTCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELQTAH*KSFSDG
Trigger: CCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGAAGGAGGTGCGTTTaGTGGTTGCAGGGGAATCCG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGRRCV*WLQGNP
Trigger: CGGATTCCCCTGCAACCACCAAACGCACCTCCTTCC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACTAACTTCTTCCGGTTaGCCTCTTTGGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLTSSG*PLWALK
Trigger: CTTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGGTCTCTGTGGTCATaGGGAAGTGTGGGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRSLWS*GSVGGA
Trigger: CGCTCCTCCCACACTTCCCCATGACCACAGAGACCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTCAGAGCCGCCCCCTaGTGCCAAGTCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLRAAP*CQVFLL
Trigger: GAGAAGAAAGACTTGGCACCAGGGGGCGGCTCTGAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGATGGGCAGCTCCATTaGCATGGAGAGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQDGQLH*HGELGE
Trigger: CTCACCCAGCTCTCCATGCCAATGGAGCTGCCCATC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTCTTGTTCTGTTGCTaGAGCAAGGTGGGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELLFCC*SKVGLS
Trigger: GCTCAACCCCACCTTGCTCCAGCAACAGAACAAGAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCTCCATGGCATCCATaGAGTCCTCGTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSPWHP*SPRFGC
Trigger: ACAGCCAAAACGAGGACTCCATGGATGCCATGGAGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTGAACAACTCTCTTTaGCAATCCAATGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLNNSL*QSNVIA
Trigger: GGCAATGACATTGGATTGCCAAAGAGAGTTGTTCAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAACAGGAGGGATGCCCTaGAGCGCTGGATACGTGGTA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQTGGMP*SAGYVV
Trigger: TACCACGTATCCAGCGCTCCAGGGCATCCCTCCTGT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGTCCGTTCCTACACTaGTCAGACCACTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECPFLH*SDHCPW
Trigger: CCAAGGACAGTGGTCTGACCAGTGTAGGAACGGACA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGAGAGTCCTTGCCCTCTaGGGATTTGGTAGGACTAGA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERVLAL*GFGRTR
Trigger: TCTAGTCCTACCAAATCCTCAGAGGGCAAGGACTCT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCTTTTCAATGGTCTTaGAAGCCAGGCTGCACTGGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAFQWS*KPGCTG
Trigger: ACCAGTGCAGCCTGGCTTTCAAGACCATTGAAAAGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGTCTTCCTCAACGATaGTGGTGTGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECLPQR*WCGLQP
Trigger: TGGCTGAAGACCACACCATCATCGTTGAGGAAGACA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAAGTTGGGGCCTTTCCTaGAAGGCAGAGCTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSWGLS*KAELAL
Trigger: CAAAGCGAGCTCTGCCTTTCAGGAAAGGCCCCAACT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATGTGGGATCTGGACCTaGGCCTTCAGATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQCGIWT*AFRSSS
Trigger: GCTGGAAGATCTGAAGGCTCAGGTCCAGATCCCACA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATGTCGAAGTACTGCCTaGGCACTCGGAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQCRSTA*ALGAGH
Trigger: ATGACCAGCTCCGAGTGCTCAGGCAGTACTTCGACA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAAACGCTTGTCTCTCTaGGGCTCTTCTCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQKRLSL*GSSPPV
Trigger: CACGGGAGGAGAAGAGCCTCAGAGAGACAAGCGTTT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTGGAGATATGCTGTTaGGAAAAGATATGGTCACGT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLEICC*EKIWSR
Trigger: ACGTGACCATATCTTTTCTCAACAGCATATCTCCAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACAAGGTTCAAGAGGGTaGTGGGGGTCAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRQGSRG*WGSRDQ
Trigger: CTGGTCTCTTGACCCCCAGCACCCTCTTGAACCTTG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTTATCTCCTTCAGCTaGCCCAGAGTCCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLISFS*PRVLAL
Trigger: GAGGGCAAGGACTCTGGGGCAGCTGAAGGAGATAAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCACGAGTTACGAGAATaGATCATGGTCATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEHELRE*IMVMWP
Trigger: CGGCCACATGACCATGATGCATTCTCGTAACTCGTG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCGCCCCCTCCGTTCTaGAGGTTCTGCATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSPPPF*RFCMLL
Trigger: CAACAACATGCAGAACCTGCAGAACGGAGGGGGCGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCTTGGTGGAGTAGTTaGACAGGACACAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPWWSS*TGHSGS
Trigger: ACTACCACTGTGTCCTGTGCAACTACTCCACCAAGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGTTCACGTCAGCGTTaGTATACTTGCAGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGSRQR*YTCSRD
Trigger: GTCCCTACTGCAAGTATAGCAACGCTGACGTGAACC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGAAAGTCCGGAAACTaGGCTGACAGAGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGKSGN*ADRGST
Trigger: TGTGCTGCCTCTGTCAGCGCAGTTTCCGGACTTTCC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGCTCCAGCTGCTGCTaGATCTCTGGCTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCSSCC*ISGFGC
Trigger: ACAGCCAAAGCCAGAGATGCAGCAGCAGCTGGAGCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAATGGGAACGCCAGCTTaGACTGGTCACACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRMGTPA*TGHTGR
Trigger: CCTACCAGTGTGACCAGTGCAAGCTGGCGTTCCCAT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCATTGCCATCATGGCTaGTTTGGTCAACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEHCHHG*FGQPLV
Trigger: AACGAGGGGTTGACCAAAGCAGCCATGATGGCAATG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCGCACTTGCACTTTTaGTTTCTGCTTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPHLHF*FLLLAL
Trigger: AAGAGCCAGAAGCAGAAAGCAAAAGTGCAAGTGCGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAATACGCAGGAGCTTTTaGCAGAACCATCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPIRRSF*QNHRCS
Trigger: TGAACAGCGATGGTTCTGCCAAAAGCTCCTGCGTAT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCATGTGTTTCTCACTaGTCATGTGAATGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPACVSH*SCECGG
Trigger: ACCTCCGCATTCACATGACCAGTGAGAAACACATGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGTCCATCTTCAGGTTaGGCAGGTTCATGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECPSSG*AGSCSG
Trigger: CCCAGAACATGAACCTGCCCAACCTGAAGATGGACA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCTTCTCCAGGCTATTaGTGTAGTAGTCACAAGCGT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPASPGY*CSSHKR
Trigger: ACGCTTGTGACTACTACACCAATAGCCTGGAGAAGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGAGGTTTTGAAGACCTaGTTGCACCCCTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEEVLKT*LHPFFQ
Trigger: CTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCCAGCGTGGAACTCTaGCTGTACGCCACGTTGCAA +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSSVEL*LYATLQ
Trigger: TTGCAACGTGGCGTACAGCCAGAGTTCCACGCTGGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCTCTCTGTATTGCTTaGCAAACCTCTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPALCIA*QTSPAV
Trigger: AACAGCTGGAGAGGTTTGCCAAGCAATACAGAGAGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCTCCATGGCATCCATaGAGTCCTCGTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESPWHP*SPRFGC
Trigger: ACAGCCAAAACGAGGACTCCATGGATGCCATGGAGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGCTTCTCTTGGGTTTaGTTTGGCTGTGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECFSWV*FGCALG
Trigger: TCCCAGTGCACAGCCAAACCAAACCCAAGAGAAGCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTGGCTGGCCAGGAGTaGGTTACTGGGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLAGQE*VTGIKQ
Trigger: CTGTTTGATCCCAGTAACCCACTCCTGGCCAGCCAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATGGCCATGCTTAACTTaGACTTCTTCTCTTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPWPCLT*TSSLSP
Trigger: GGGCGAAAGAGAAGAAGTCCAAGTTAAGCATGGCCA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTATCCCAAAATGCTTaGCCATGCTTAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLSQNA*PCLTWT
Trigger: AGTCCAAGTTAAGCATGGCCAAGCATTTTGGGATAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAAGTGCACTCGGTCTTaGGTCCCTCATAACTCGTTT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPKCTRS*VPHNSF
Trigger: AAACGAGTTATGAGGGACCCAAGACCGAGTGCACTT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCTGCTCTTCTGGTTTaGGGGATTCTTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESALLV*GILWQG
Trigger: ACCCTGCCAAAGAATCCCCCAAACCAGAAGAGCAGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACGAATAGTCGTCTGTTaGCATCGAGGGCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRRIVVC*HRGLNP
Trigger: GGGGTTCAGCCCTCGATGCCAACAGACGACTATTCG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGGTCCGTCGGACTTTTaGCTGAGATCCGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRGPSDF*LRSVSD
Trigger: GTCTGACACGGATCTCAGCCAAAAGTCCGACGGACC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGCACTTGGGGCACTTaGGCGTCTTACACGAGTTAC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCTWGT*ASYTSY
Trigger: GTAACTCGTGTAAGACGCTCAAGTGCCCCAAGTGCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACCTCTGCTTTCGAGTTaGAGGTGGCCAGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRPLLSS*RWPVHQ
Trigger: CTGATGAACTGGCCACCTTCAACTCGAAAGCAGAGG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACCACTCTCATGCTGCTaGAGGTGCTTGTACAGCTTC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRPLSCC*RCLYSF
Trigger: GAAGCTGTACAAGCACCTGCAGCAGCATGAGAGTGG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACGTGGTGTCTGTGATTaGGGTGTTGACCGAGGAACA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRGVCD*GVDRGT
Trigger: TGTTCCTCGGTCAACACCGCAATCACAGACACCACG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACGTTGTCATATTCCTTaGTATAAAAGCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRCHIP*YKSSGL
Trigger: CAGCCCCGAGCTTTTATAGCAAGGAATATGACAACG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGTAGTTGCCGCTGTTaGTGCTGCTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCSCRC*CCCCCC
Trigger: GCAACAGCAACAGCAGCAGCAACAGCGGCAACTACA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATGTTGCTGTTGCTGCTaGTGTTGCTGTAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQCCCCC*CCCSCR
Trigger: GCGGCAACTACAGCAACAGCAGCAGCAACAGCAACA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGTTGCTGTTGCTGCTaGTGTTGCTGTAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCCCCC*CCCSCR
Trigger: GCGGCAACTACAGCAACAGCAGCAGCAACAGCAACA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATTTGGCGTTTCTTGCTaGTCTCGTGATTGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPFGVSC*SRDCSV
Trigger: CACAGAACAATCACGAGAGCAGCAAGAAACGCCAAA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATGTAGGTCTGGAGGCTaGAAAAGGAGGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQCRSGG*KRRLST
Trigger: AGTGCTCAGCCTCCTTTTCCAGCCTCCAGACCTACA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCTCGTAATTCTTCCTaGCTTTCTGTCGGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESRNSS*LSVGRS
Trigger: AGAACGCCCGACAGAAAGCCAGGAAGAATTACGAGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGATGTCTCCCTTCATTTaGAGTCCCCCATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEMSPFI*SPPSQS
Trigger: AGACTGTGATGGGGGACTCCAAATGAAGGGAGACAT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACTGCTCGGGGGTAGGTaGGAAAAGCTAGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRLLGGR*EKLVPS
Trigger: TGATGGAACTAGCTTTTCCCACCTACCCCCGAGCAG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACGGACATTGCCATCATaGCTGCTTTGGTCAACCCCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRRTLPS*LLWSTP
Trigger: AGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACGGACATTGCCATCATaGCTGCTTTGGTCAACCCCT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRTLPS*LLWSTP
Trigger: AGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTTCTCCTTGTCCAGCTaGCTTCCAATGGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEFSLSS*LPMVSL
Trigger: TAAGGACACCATTGGAAGCCAGCTGGACAAGGAGAA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTCTGCTGGTATTGCTaGTACTGCTGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLCWYC*YCCSRE
Trigger: CTCCCTACTGCAGCAGTACCAGCAATACCAGCAGAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCCTGCAGACTCTGCTaGTATTGCTGGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSCRLC*YCWYCC
Trigger: GCAGCAGTACCAGCAATACCAGCAGAGTCTGCAGGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGTTTGGGGGATTCTTTaGCAGGGTCTTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRVWGIL*QGLCLG
Trigger: CCCCAGACAAAGACCCTGCCAAAGAATCCCCCAAAC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGTTTTTCTGCTCTTCTaGTTTGGGGGATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPVFLLF*FGGFFG
Trigger: GCCAAAGAATCCCCCAAACCAGAAGAGCAGAAAAAC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACTTGTACTGCACCTTTaGAACAATGAAGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPLVLHL*NNEGVT
Trigger: TGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAAAACTGGGGGTGAATaGACTGGTTCTGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQKTGGE*TGSGHS
Trigger: TGAGTGCCCAGAACCAGTTCATTCACCCCCAGTTTT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATCCAAAAACTGGGGGTaGATGAACTGGTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSKNWG*MNWFWA
Trigger: TGCCCAGAACCAGTTCATTCACCCCCAGTTTTTGGA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTGCAGATTGGTCATTTaGGTGCGAAAACGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEECRLVI*VRKRFC
Trigger: GCAGAAACGTTTTCGCACTCAAATGACCAATCTGCA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAAAGTGTTGATGATCTaGGGGTACACGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQKVLMI*GYTGAA
Trigger: TGCTGCACCCGTGTACCCGCAGATCATCAACACTTT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCAATCCAATGTCATTaGCTAGAACCTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAIQCH*LEPHTP
Trigger: TGGAGTGTGAGGTTCTAGGCAATGACATTGGATTGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGCTGCTGCTGCTGCTaGTGCTGTACTTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCCCCC*CCTFCC
Trigger: GCAACAAAAAGTACAGCAGCAGCAGCAGCAGCAGCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTCCTCCAGGTCATTTaGAAAGAGTCCTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLLQVI*KESFAA
Trigger: GGCTGCAAAGGACTCTTTCCAAATGACCTGGAGGAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGAGGTTTTGAAGACCTaGTTGCACCCCTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQEVLKT*LHPFFQ
Trigger: CTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAAAGCCAGGCTGCACTaGTTGCAGCGGTACTTATAC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQKARLH*LQRYLY
Trigger: GTATAAGTACCGCTGCAACCAGTGCAGCCTGGCTTT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATCTGCTCTTCTGGTTTaGGGGATTCTTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSALLV*GILWQG
Trigger: ACCCTGCCAAAGAATCCCCCAAACCAGAAGAGCAGA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTTGTACTGCACCTTTaGAACAATGAAGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELVLHL*NNEGVT
Trigger: TGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 72 bp AGGATGTATGAAATAACTCCAATTCTGACAGGTATCTaGGTGCCGTTGTGCCAAATAGTATCTAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: RMYEITPILTGI*VPLCQIVSSTK
Trigger: CTTGGTGCTAGATACTATTTGGCACAACGGCACCAAGATACCTGTCAGAATTGGAGTTATTTCATACATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCATTTCCCGAAGGATaGGGCTATGTGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPFPEG*GYVESV
Trigger: AACACTTTCCACATAGCCTCATCCTTCGGGAAATGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACCATTTCCCGAAGGATaGGGCTATGTGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRPFPEG*GYVESV
Trigger: AACACTTTCCACATAGCCTCATCCTTCGGGAAATGG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGAAATGCTTTGGTTTaGGAGAGCAAGGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRNALV*ESKVLF
Trigger: AAAAAGGACCTTGCTCTCTCAAACCAAAGCATTTCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACATCATCGCCCTCTGTaGTTTCATTTGGTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRHHRPL*FHLVLV
Trigger: CACCAGAACCAAATGAAAGCACAGAGGGCGATGATG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACAGCGTTGCTATACTTaGAGTAGGGACACTGGTACA +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQQRCYT*SRDTGT
Trigger: TGTACCAGTGTCCCTACTGCAAGTATAGCAACGCTG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCAGACCAACTTGTACTaGACCTTTGGAACAATGAAG +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEQTNLY*TFGTMK
Trigger: CTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAAGTCTTTCTTCTCTTTaGCCTTCGAGGCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSLSSL*PSRHLA
Trigger: TGCCAGATGCCTCGAAGGCCAAAGAGAAGAAAGACT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCTCGTAATTCTTCCTaGCTTTCTGTCGGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSRNSS*LSVGRS
Trigger: AGAACGCCCGACAGAAAGCCAGGAAGAATTACGAGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATCGGTGCCGAAGATTTaGTTTCAGTCGCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSVPKI*FQSLFL
Trigger: CAGGAATAGCGACTGAAACCAAATCTTCGGCACCGA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCAACTGGCGTACAGTaGCTGGGTCAAAATATTCTT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESTGVQ*LGQNIL
Trigger: AAGAATATTTTGACCCAGCCACTGTACGCCAGTTGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR TCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGTAGTCATTAAAGCATaGCTTGAGGACCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQVVIKA*LEDLQL
Trigger: CAGCTGAAGGTCCTCAAGTCATGCTTTAATGACTAC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAAATGGGTTTCCTCTTaGCGTAGAGCACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQKWVSS*RRAQSH
Trigger: ATGGCTTTGTGCTCTACGGCAAGAGGAAACCCATTT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGATTGGTCATTTGAGTaGGAAAACGTTTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRDWSFE*ENVSAQ
Trigger: CTGGGCAGAAACGTTTTCGCACTCAAATGACCAATC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTCTTTGGCGTTTCTTaGTGCTCTCGTGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLFGVS*CSRDCS
Trigger: AGAACAATCACGAGAGCAGCAAGAAACGCCAAAGAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGCTTTCATTTGGTTCTaGTGCTGTGGCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQAFIWF*CCGTVF
Trigger: AAAGACAGTGCCACAGCACCAGAACCAAATGAAAGC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCTTCAGCTGCAGATTaGTCATTTGAGTGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPSAAD*SFECEN
Trigger: GTTTTCGCACTCAAATGACCAATCTGCAGCTGAAGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTTATCCCAAAATGCTTaGCCATGCTTAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELSQNA*PCLTWT
Trigger: AGTCCAAGTTAAGCATGGCCAAGCATTTTGGGATAA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGTTTTTCTGCTCTTCTaGTTTGGGGGATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQVFLLF*FGGFFG
Trigger: GCCAAAGAATCCCCCAAACCAGAAGAGCAGAAAAAC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 72 bp GAAGTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTaGAGATGGTCTACAACTCAACGACTCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: EVPIEELTFKVE*RWSTTQRLTPT
Trigger: TGTTGGAGTGAGTCGTTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
3UTR CAA 72 bp AGTAAACAAACAAAACAAAACAACCTAGTCAAAGCTTaGTTTCACAGTGGGCAGTATCTCAGCGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: SKQTKQNNLVKA*FHSGQYLSANK
Trigger: TTTGTTGGCGCTGAGATACTGCCCACTGTGAAACAAAGCTTTGACTAGGTTGTTTTGTTTTGTTTGTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR GCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACAAAATGCTTGGCCATaGTTAACTTGGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQQNAWP*LTWTSS
Trigger: AGAAGAAGTCCAAGTTAAGCATGGCCAAGCATTTTG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGAAATTCATCATCCTTTaGGTAAGCATTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEKFIIL*VSIGIK
Trigger: TTTGATGCCAATGCTTACCCAAAGGATGATGAATTT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATTGTCCAGCTTAGTTTaGTCAAAGTTCAGGTTAACG +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRLSSLV*SKFRLT
Trigger: CGTTAACCTGAACTTTGACCAAACTAAGCTGGACAA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTGTCCAGCTTAGTTTaGTCAAAGTTCAGGTTAACG +
Preference number: 4 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLSSLV*SKFRLT
Trigger: CGTTAACCTGAACTTTGACCAAACTAAGCTGGACAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CCA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAAAATTCATCATCCTTTaGGTAAGCATTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRKFIIL*VSIGIK
Trigger: TTTGATGCCAATGCTTACCCAAAGGATGATGAATTT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GGAGGGGGCACCGCAGGAGCTGCCGATGTTGGCGGCGGCCGCTGCTaGAGCTGCGGCGGCGGCCGCGGCCCCGGCGCTGTGGCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: GGGTAGAADVGGGRC*SCGGGRGPGAVAED
Trigger: GTCTTCAGCCACAGCGCCGGGGCCGCGGCCGCCGCCGCAGCTGCAGCAGCGGCCGCCGCCAACATCGGCAGCTCCTGCGGTGCCCCCTCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp CGCTCTCGCACGCCAGGCAGTGGTACGAGCCGCCTCCGCCACCGCTaGCACCACCGCCACCGCCGCTGCCACCGCTGCCGGTGGGGACAT +
Preference number: 5 (lower is better)
Translates to: RSRTPGSGTSRLRHR*HHRHRRCHRCRWGH
Trigger: ATGTCCCCACCGGCAGCGGTGGCAGCGGCGGTGGCGGTGGTGGCAGCGGTGGCGGAGGCGGCTCGTACCACTGCCTGGCGTGCGAGAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GGTACGAGCCGCCTCCGCCACCGCTGCCACCACCGCCACCGCCGCTaGCACCGCTGCCGGTGGGGACATGAAGCACCATCTCTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: GTSRLRHRCHHRHRR*HRCRWGHEAPSLAG
Trigger: ACCTGCAAGAGATGGTGCTTCATGTCCCCACCGGCAGCGGTGGCAGCGGCGGTGGCGGTGGTGGCAGCGGTGGCGGAGGCGGCTCGTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp AGCCCGCCAAGGTTCAAGAGGGTGCTGGGGGTCAAGAGACCAGCCTaGGGCTGCTCAGGGCCAGCAGCGGCTACGGCTGGGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SPPRFKRVLGVKRPA*GCSGPAAATAGRAS
Trigger: GGAGGCCCTCCCAGCCGTAGCCGCTGCTGGCCCTGAGCAGCCCCAGGCTGGTCTCTTGACCCCCAGCACCCTCTTGAACCTTGGCGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GGCAGCTCCATTGGCATGGAGAGCTGGGTGAGAGGCACGGAGGGTTaGGCGGGGGCGATGGTGGGCGAAGTGATGGGTGGAGCCGACGCG +
Preference number: 5 (lower is better)
Translates to: GSSIGMESWVRGTEG*AGAMVGEVMGGADA
Trigger: CGCGTCGGCTCCACCCATCACTTCGCCCACCATCGCCCCCGCCCAACCCTCCGTGCCTCTCACCCAGCTCTCCATGCCAATGGAGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CGCCACCGCTGCCACCACCGCCACCGCCGCTGCCACCGCTGCCGGTaGGGACATGAAGCACCATCTCTTGCAGGTTCACCACAGACTGGC +
Preference number: 5 (lower is better)
Translates to: RHRCHHRHRRCHRCR*GHEAPSLAGSPQTG
Trigger: GCCAGTCTGTGGTGAACCTGCAAGAGATGGTGCTTCATGTCCCCACCGGCAGCGGTGGCAGCGGCGGTGGCGGTGGTGGCAGCGGTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TGTAGGTCTGGAGGCTGGAAAAGGAGGCTGAGCACTCGTTGCAGCTaGCCTCCTTGCTGGCGGGCTCGGCGGGCGGCCCAGCGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: CRSGGWKRRLSTRCS*PPCWRARRAAQRRC
Trigger: GCACCTCCGCTGGGCCGCCCGCCGAGCCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTCCTTTTCCAGCCTCCAGACCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGCTGCAGCTCCTGCTGCAGGTGTGCCTGGACTTGCGCCTGGGCCTaGGCGAGTGTCTGGGCTTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CCSSCCRCAWTCAWA*ASVWACCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACACCTGCAGCAGGAGCTGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGGATCAGGGCGGCCTGTTGCTGCAGCTCCTGCTGCAGGTGTGCCTaGACTTGCGCCTGGGCCTGGGCGAGTGTCTGGGCTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WIRAACCCSSCCRCA*TCAWAWASVWACCC
Trigger: GCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACACCTGCAGCAGGAGCTGCAGCAACAGGCCGCCCTGATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TGGTGTCGCTGGCGCTCTCCTCTCGCAGGGCCGGCGGGGGATGCGTaGCAGGGCAGTGATGCTCCATGTAGGTCTGGAGGCTGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: WCRWRSPLAGPAGDA*QGSDAPCRSGGWKR
Trigger: CCTTTTCCAGCCTCCAGACCTACATGGAGCATCACTGCCCTGGCACGCATCCCCCGCCGGCCCTGCGAGAGGAGAGCGCCAGCGACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TGGATGAAGCTCTCGCCCAGGTTCATCAGCTCCTCCGACACCAGCTaGCCGCCCCCGAGGCGCATGTCGAGGGGGATCTCACCGCCCACT +
Preference number: 5 (lower is better)
Translates to: WMKLSPRFISSSDTS*PPPRRMSRGISPPT
Trigger: AGTGGGCGGTGAGATCCCCCTCGACATGCGCCTCGGGGGCGGGCAGCTGGTGTCGGAGGAGCTGATGAACCTGGGCGAGAGCTTCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GAGGGACACCCCGCCGCTGTTGCCAGTCCCGTTGCTGTTCCCACTTaGAGCCTCCAGCTTGGCTGCCCGTGCCTTGGTCTGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: EGHPAAVASPVAVPT*SLQLGCPCLGLVQH
Trigger: GTGCTGCACCAGACCAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAGCGGCGGGGTGTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GCCTGGACTTGCGCCTGGGCCTGGGCGAGTGTCTGGGCTTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTGGACGCAATC +
Preference number: 5 (lower is better)
Translates to: AWTCAWAWASVWACC*CCCCCCCCCCLDAI
Trigger: GATTGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TGTGCCTGGACTTGCGCCTGGGCCTGGGCGAGTGTCTGGGCTTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTGGACGCA +
Preference number: 5 (lower is better)
Translates to: CAWTCAWAWASVWAC*CCCCCCCCCCCLDA
Trigger: TGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp AGGTGTGCCTGGACTTGCGCCTGGGCCTGGGCGAGTGTCTGGGCTTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: RCAWTCAWAWASVWA*CCCCCCCCCCCCLD
Trigger: GTCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGCTGCAGGTGTGCCTGGACTTGCGCCTGGGCCTGGGCGAGTGTCTaGGCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: CCRCAWTCAWAWASV*ACCCCCCCCCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACACCTGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGCAGGTTCACCACAGACTGGCCGAAGCAGCAGAGGGACTTCAGGTaGCTCCTCGCCGCCTCCTCGTCGCCGAAGCCCGCCTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: CRFTTDWPKQQRDFR*LLAASSSPKPAWHL
Trigger: CAAGTGCCAGGCGGGCTTCGGCGACGAGGAGGCGGCGAGGAGCCACCTGAAGTCCCTCTGCTGCTTCGGCCAGTCTGTGGTGAACCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GGACCTGAGCCTTCAGATCTTCCAGCAGGCCTGGGCCTGACCCCGTaGGTGTCAGTGCCCCGCTGGTCACAGGCAGGCTCACCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GPEPSDLPAGLGLTP*VSVPRWSQAGSPQG
Trigger: ACCCTGAGGTGAGCCTGCCTGTGACCAGCGGGGCACTGACACTCACGGGGTCAGGCCCAGGCCTGCTGGAAGATCTGAAGGCTCAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GTGGAGGTGGGCGTCGAAGGGGAAGTGGCTGAGCTCGCTGGGATCTaGGGGATGGCACCCGAGAGCAGCTGGCTGGCCAGGAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: VEVGVEGEVAELAGI*GMAPESSWLARSGL
Trigger: TAACCCACTCCTGGCCAGCCAGCTGCTCTCGGGTGCCATCCCTCAGATCCCAGCGAGCTCAGCCACTTCCCCTTCGACGCCCACCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp ATGGGGTTCCCCAGAGGCGGCATCACCACGCTCTCGGGTGGCACCTaGCTCAGCGCATTGACGCTTGGAGCCATGGCGGCACTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: MGFPRGGITTLSGGT*LSALTLGAMAALLG
Trigger: TCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGGTGCCACCCGAGAGCGTGGTGATGCCGCCTCTGGGGAACCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp AGGTGTCCGTTCCTACACTGGTCAGACCACTGTCCTTGGGGCAGCTaGGGTCTTTGGGACCCTCCACCGGGCTCGCCGGTCCGTCGGACT +
Preference number: 5 (lower is better)
Translates to: RCPFLHWSDHCPWGS*GLWDPPPGSPVRRT
Trigger: AGTCCGACGGACCGGCGAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGACCAGTGTAGGAACGGACACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp CTCCCGCAGCTGGGGTCAGCAGAGGTCGGCTTGAGGTCCCCGCCGTaGTCCATGCTTGCAGGTGGCAAGATGTTCTTTCCCGGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LPQLGSAEVGLRSPP*SMLAGGKMFFPGSS
Trigger: AGAGGACCCGGGAAAGAACATCTTGCCACCTGCAAGCATGGAGCACGGCGGGGACCTCAAGCCGACCTCTGCTGACCCCAGCTGCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp AGGCCCTTCTGCAGCCGCTGCAGCTTGCGCAGGCTCTCACTGCGCTaGTGCTTCATGGAGCGCACGTGCTGGATGAGGTTGAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RPFCSRCSLRRLSLR*CFMERTCWMRLSLA
Trigger: GGCCAAGCTCAACCTCATCCAGCACGTGCGCTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGCAGAAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp AGGGCAGTGATGCTCCATGTAGGTCTGGAGGCTGGAAAAGGAGGCTaGGCACTCGTTGCAGCTGACCTCCTTGCTGGCGGGCTCGGCGGG +
Preference number: 5 (lower is better)
Translates to: RAVMLHVGLEAGKGG*ALVAADLLAGGLGG
Trigger: CCCGCCGAGCCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTCCTTTTCCAGCCTCCAGACCTACATGGAGCATCACTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GGTAAGAGTCCCCCATCACGGCCTTCCACTCGTCCTCCGAGAGGCTaGGCTCCACGTTCATGTGCAGCCCCAGCATGTCCAGGTTGTCCG +
Preference number: 5 (lower is better)
Translates to: GKSPPSRPSTRPPRG*APRSCAAPACPGCP
Trigger: CGGACAACCTGGACATGCTGGGGCTGCACATGAACGTGGAGCGCAGCCTCTCGGAGGACGAGTGGAAGGCCGTGATGGGGGACTCTTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp CCCTTCTGCAGCCGCTGCAGCTTGCGCAGGCTCTCACTGCGCTGGTaGTTCATGGAGCGCACGTGCTGGATGAGGTTGAGCTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: PFCSRCSLRRLSLRW*FMERTCWMRLSLAL
Trigger: CAAGGCCAAGCTCAACCTCATCCAGCACGTGCGCTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGCAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GCTTTCGAGTTGAAGGTGGCCAGTTCATCAGTCTCCGCTGTGAGCTaGAAGAACGCGGAGGGCGCGGTATTGGCCGCTGCCGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: AFELKVASSSVSAVS*KNAEGAVLAAAADG
Trigger: ACCGTCGGCGGCAGCGGCCAATACCGCGCCCTCCGCGTTCTTGCAGCTCACAGCGGAGACTGATGAACTGGCCACCTTCAACTCGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CGCTGTTGCCAGTCCCGTTGCTGTTCCCACTTGCAGCCTCCAGCTTaGCTGCCCGTGCCTTGGTCTGGTGCAGCACAGACCGCATGTGGA +
Preference number: 5 (lower is better)
Translates to: RCCQSRCCSHLQPPA*LPVPWSGAAQTACG
Trigger: TCCACATGCGGTCTGTGCTGCACCAGACCAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CACCTGGCTCAGCGCATTGACGCTTGGAGCCATGGCGGCACTGCTTaGATTGGTGGCGGTAAAGGTGTTGTTGGCGCCGCTGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: HLAQRIDAWSHGGTA*IGGGKGVVGAAAAH
Trigger: GTGGGCAGCAGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp AGCCTGAGTCTTCTCTCCCGCAGCTGGGGTCAGCAGAGGTCGGCTTaGGGTCCCCGCCGTGCTCCATGCTTGCAGGTGGCAAGATGTTCT +
Preference number: 5 (lower is better)
Translates to: SLSLLSRSWGQQRSA*GPRRAPCLQVARCS
Trigger: AGAACATCTTGCCACCTGCAAGCATGGAGCACGGCGGGGACCTCAAGCCGACCTCTGCTGACCCCAGCTGCGGGAGAGAAGACTCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TCTGTGGTCATGGGGAAGTGTGGGAGGAGCGTGGGGTTGAACAGCTaGGACTGGATCAGGGCGGCCTGTTGCTGCAGCTCCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SVVMGKCGRSVGLNS*DWIRAACCCSSCCR
Trigger: CCTGCAGCAGGAGCTGCAGCAACAGGCCGCCCTGATCCAGTCTCAGCTGTTCAACCCCACGCTCCTCCCACACTTCCCCATGACCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TGCTGCTGCAGGATCTGCTGGTGGCTCTGCTGTGGGATCTGGACCTaGGCCTTCAGATCTTCCAGCAGGCCTGGGCCTGACCCCGTGAGT +
Preference number: 5 (lower is better)
Translates to: CCCRICWWLCCGIWT*AFRSSSRPGPDPVS
Trigger: ACTCACGGGGTCAGGCCCAGGCCTGCTGGAAGATCTGAAGGCTCAGGTCCAGATCCCACAGCAGAGCCACCAGCAGATCCTGCAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TCCTGGTGCGAGGCCTCTTGTTCTGTTGCTGGAGCAAGGTGGGGTTaGGCTGGTGTTGGTAGAGCTGGGCCAGATCGGCAGGCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: SWCEASCSVAGARWG*AGVGRAGPDRQAAA
Trigger: AGCCGCTGCCTGCCGATCTGGCCCAGCTCTACCAACACCAGCTCAACCCCACCTTGCTCCAGCAACAGAACAAGAGGCCTCGCACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TCCAGCTGCTCCGGGGTTATGGTCGTCCTCAAACGCTTGTCTCTCTaGGGCTCTTCTCCTCCCGTGCCGCTGTCGTTCTCACCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SSCSGVMVVLKRLSL*GSSPPVPLSFSPGL
Trigger: GAGCCCCGGTGAGAACGACAGCGGCACGGGAGGAGAAGAGCCTCAGAGAGACAAGCGTTTGAGGACGACCATAACCCCGGAGCAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp AAGCTGAGCAGGGTCCACTGCGTACTCCATGGCGGGCAGTGGGGCTaGGATGGTTGCTGTAGCCGCTGGAGGGGCCTCTCCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: KLSRVHCVLHGGQWG*DGCCSRWRGLSFLL
Trigger: AAGGAGAAAGGAGAGGCCCCTCCAGCGGCTACAGCAACCATCTCAGCCCCACTGCCCGCCATGGAGTACGCAGTGGACCCTGCTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GCTCTCGTGATTGTTCTGTGTTTGTGCAAGGCCGACTCGAGATGCTaGCTCAGCGCTTCCTCCCCGCAGAGCGCGCTCTCGCACGCCAGG +
Preference number: 5 (lower is better)
Translates to: ALVIVLCLCKADSRC*LSASSPQSALSHAR
Trigger: CCTGGCGTGCGAGAGCGCGCTCTGCGGGGAGGAAGCGCTGAGTCAGCATCTCGAGTCGGCCTTGCACAAACACAGAACAATCACGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GTCTTGAAAGCCAGGCTGCACTGGTTGCAGCGGTACTTATACACGTaGCGGTCTGACACGGGCAGCTGGGGCCTCTTGGCGTGCACCTCG +
Preference number: 5 (lower is better)
Translates to: VLKARLHWLQRYLYT*RSDTGSWGLLACTS
Trigger: CGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCACGTGTATAAGTACCGCTGCAACCAGTGCAGCCTGGCTTTCAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp ACTCTGCTGCTGCTGCTGCTGCAGGATCTGCTGGTGGCTCTGCTGTaGGATCTGGACCTGAGCCTTCAGATCTTCCAGCAGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TLLLLLLQDLLVALL*DLDLSLQIFQQAWA
Trigger: GGCCCAGGCCTGCTGGAAGATCTGAAGGCTCAGGTCCAGATCCCACAGCAGAGCCACCAGCAGATCCTGCAGCAGCAGCAGCAGCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGGCATTGTCTGCATCATCAGTGGCGAGAAGATGGGCAGCTCCATTaGCATGGAGAGCTGGGTGAGAGGCACGGAGGGTTGGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: WHCLHHQWREDGQLH*HGELGERHGGLGGG
Trigger: GCCCCCGCCCAACCCTCCGTGCCTCTCACCCAGCTCTCCATGCCAATGGAGCTGCCCATCTTCTCGCCACTGATGATGCAGACAATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TTTCTCACCATCTTTGTCCTTACGTTGCTGCTGCGGGGTCAGCTGTaGTGCAGGGATCTGTTGGGCTGCTGGCGGCGGCGGAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FLTIFVLTLLLRGQL*CRDLLGCWRRRRLL
Trigger: CAGCAGCCTCCGCCGCCGCCAGCAGCCCAACAGATCCCTGCACCACAGCTGACCCCGCAGCAGCAACGTAAGGACAAAGATGGTGAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GACTTCAGGTGGCTCCTCGCCGCCTCCTCGTCGCCGAAGCCCGCCTaGCACTTGCGGCAGACCAACTTGTACTGCACCTTTGGAACAATG +
Preference number: 5 (lower is better)
Translates to: DFRWLLAASSSPKPA*HLRQTNLYCTFGTM
Trigger: CATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCTTCGGCGACGAGGAGGCGGCGAGGAGCCACCTGAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTGCCCTCTGCCACGTaGGCCCTGACGCCCTCACTG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLPSAT*ALTPSL
Trigger: CAGTGAGGGCGTCAGGGCCAACGTGGCAGAGGGCAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATCAGCAGAGGTCGGCTaGAGGTCCCCGCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSAEVG*RSPPCS
Trigger: GGAGCACGGCGGGGACCTCAAGCCGACCTCTGCTGA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGAGAGGCACGGAGGGTaGGGCGGGGGCGATGGTGGG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTERHGG*GGGDGG
Trigger: CCCACCATCGCCCCCGCCCAACCCTCCGTGCCTCTC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TGGGCTGCTCCATGCTACTGGGTTTGTCGGGGAGGTGGGCGCTGTTaGGTTCAGTCCATTGCCGGTGCTGAGGGATCCCGCACCCATTGT +
Preference number: 5 (lower is better)
Translates to: WAAPCYWVCRGGGRC*VQSIAGAEGSRTHC
Trigger: ACAATGGGTGCGGGATCCCTCAGCACCGGCAATGGACTGAACTCAACAGCGCCCACCTCCCCGACAAACCCAGTAGCATGGAGCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp CGAGTTACGAGAATGCATCATGGTCATGTGGCCGCCCAGCGAGCGTaGGGAGCCCAGGACCGTGTCACATTTGGGGCACTCCACACCGCT +
Preference number: 5 (lower is better)
Translates to: RVTRMHHGHVAAQRA*GAQDRVTFGALHTA
Trigger: AGCGGTGTGGAGTGCCCCAAATGTGACACGGTCCTGGGCTCCTCACGCTCGCTGGGCGGCCACATGACCATGATGCATTCTCGTAACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp AGCCAGGCTGCACTGGTTGCAGCGGTACTTATACACGTGGCGGTCTaGCACGGGCAGCTGGGGCCTCTTGGCGTGCACCTCGTTGAAATG +
Preference number: 5 (lower is better)
Translates to: SQAALVAAVLIHVAV*HGQLGPLGVHLVEM
Trigger: CATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCACGTGTATAAGTACCGCTGCAACCAGTGCAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GCAAGGTCTCTGTGGTCATGGGGAAGTGTGGGAGGAGCGTGGGGTTaGACAGCTGAGACTGGATCAGGGCGGCCTGTTGCTGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ARSLWSWGSVGGAWG*TAETGSGRPVAAAP
Trigger: AGGAGCTGCAGCAACAGGCCGCCCTGATCCAGTCTCAGCTGTTCAACCCCACGCTCCTCCCACACTTCCCCATGACCACAGAGACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp CTTTGGGACCCTCCACCGGGCTCGCCGGTCCGTCGGACTTTTGGCTaGGATCCGTGTCAGACTCCTCCGAATAGTCGTCTGTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: LWDPPPGSPVRRTFG*DPCQTPPNSRLLAS
Trigger: CGATGCCAACAGACGACTATTCGGAGGAGTCTGACACGGATCTCAGCCAAAAGTCCGACGGACCGGCGAGCCCGGTGGAGGGTCCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp ACGGCCTTCCACTCGTCCTCCGAGAGGCTGCGCTCCACGTTCATGTaGAGCCCCAGCATGTCCAGGTTGTCCGTCGTGAACTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: TAFHSSSERLRSTFM*SPSMSRLSVVNLLQ
Trigger: CTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCACATGAACGTGGAGCGCAGCCTCTCGGAGGACGAGTGGAAGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TCCCCTGGTCTTTGGCCAGCTCCTCTGGGTCAGCAGATGCTTCGCTaGGTCCTTCGGCATCTTCAACGGCTTCCTCTGGGTCAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SPGLWPAPLGQQMLR*VLRHLQRLPLGQWR
Trigger: CCTCCACTGACCCAGAGGAAGCCGTTGAAGATGCCGAAGGACCCAGCGAAGCATCTGCTGACCCAGAGGAGCTGGCCAAAGACCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CCGGGTCCTCTGACGCTTCAGGTTGCTTTCCTGCCTCTTCCAAAGTaGAGTTCCCATCTCGGTCCGCAGCGGCAGCAGGGAGGAACATGC +
Preference number: 5 (lower is better)
Translates to: PGPLTLQVAFLPLPK*SSHLGPQRQQGGTC
Trigger: GCATGTTCCTCCCTGCTGCCGCTGCGGACCGAGATGGGAACTCCACTTTGGAAGAGGCAGGAAAGCAACCTGAAGCGTCAGAGGACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TCTGACACGGGCAGCTGGGGCCTCTTGGCGTGCACCTCGTTGAAATaGGTCTGCAGTGTGGCGGAGGTTTTGAAGACCTGGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: SDTGSWGLLACTSLK*VCSVAEVLKTWLHP
Trigger: GGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp AGCTTGGCTGCCCGTGCCTTGGTCTGGTGCAGCACAGACCGCATGTaGATCTCCAGCGTGGAACTCTGGCTGTACGCCACGTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: SLAARALVWCSTDRM*ISSVELWLYATLQV
Trigger: CACTTGCAACGTGGCGTACAGCCAGAGTTCCACGCTGGAGATCCACATGCGGTCTGTGCTGCACCAGACCAAGGCACGGGCAGCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CATCACCACGCTCTCGGGTGGCACCTGGCTCAGCGCATTGACGCTTaGAGCCATGGCGGCACTGCTTGGATTGGTGGCGGTAAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: HHHALGWHLAQRIDA*SHGGTAWIGGGKGV
Trigger: AACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGGTGCCACCCGAGAGCGTGGTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGGATCCCGCACCCATaGTCCTTCCCCGAGACGACG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGIPHP*SFPETT
Trigger: CGTCGTCTCGGGGAAGGACAATGGGTGCGGGATCCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGATCAGGGCGGCCTGTaGCTGCAGCTCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQDQGGL*LQLLLQ
Trigger: CTGCAGCAGGAGCTGCAGCAACAGGCCGCCCTGATC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GCCAAAGTTCTCCAGCAAGGCCTTGGTAGCATTCCCCCTGGCATCTaGAGCAATGCGTGGAGGAAGCATAGTGCCCTCAGAGCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: AKVLQQGLGSIPPGI*SNAWRKHSALRAAP
Trigger: GGGGGCGGCTCTGAGGGCACTATGCTTCCTCCACGCATTGCTTCAGATGCCAGGGGGAATGCTACCAAGGCCTTGCTGGAGAACTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp CCCCTCGTTCGGTGCCGAAGATTTGGTTTCAGTCGCTATTCCTGTTaGGCTGTCGTTGTCGGCGTTGCCCTCGTCCCCTGTCGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: PLVRCRRFGFSRYSC*AVVVGVALVPCRGV
Trigger: GACACCACGACAGGGGACGAGGGCAACGCCGACAACGACAGCGCAACAGGAATAGCGACTGAAACCAAATCTTCGGCACCGAACGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TCCACGCAGTCAGGTGCCACGCTGTGGAGGTGGGTGAGGTGCAGCTaGAGGTGGATCTTGTTGTTGAGCATGTCTTGGCACAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: STQSGATLWRWVRCS*RWILLLSMSWHRGQ
Trigger: CTGTCCCCTGTGCCAAGACATGCTCAACAACAAGATCCACCTCCAGCTGCACCTCACCCACCTCCACAGCGTGGCACCTGACTGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGGTTGCAGCGGTACTTATACACGTGGCGGTCTGACACGGGCAGCTaGGGCCTCTTGGCGTGCACCTCGTTGAAATGGGTCTGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: WLQRYLYTWRSDTGS*GLLACTSLKWVCSV
Trigger: CACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCACGTGTATAAGTACCGCTGCAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATCCATGCTACTGGGTTaGTCGGGGAGGTGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSMLLG*SGRWAL
Trigger: CAGCGCCCACCTCCCCGACAAACCCAGTAGCATGGA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGCCCCAGGTGGCGGTaGTGCTGGATCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSPRWR*CWIWVM
Trigger: CATGACCCAGATCCAGCACAACCGCCACCTGGGGCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGCAGCTGGGGCCTCTaGGCGTGCACCTCGTTGAAA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGSWGL*ACTSLK
Trigger: TTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGGGGGAAGGTACCGTaGTGCTGGGCAGACCCATCA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRGKVP*CWADPS
Trigger: TGATGGGTCTGCCCAGCACAACGGTACCTTCCCCCG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTGGGGGACTGGGGTTaGGCTTGCTTTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLGDWG*ACFGLL
Trigger: CAGCAGCCCAAAGCAAGCCAAACCCCAGTCCCCCAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp AGACGGCACATTGGAAGAGCTTCAGCGATGGGTCGTTGGTCTGGATaGAGCTCTCGCCCAGGTTCATCAGCTCCTCCGACACCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RRHIGRASAMGRWSG*SSRPGSSAPPTPAA
Trigger: GGCAGCTGGTGTCGGAGGAGCTGATGAACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TGGTGCCAAGTCTTTCTTCTCTTTGGCCTTCGAGGCATCTGGCAGTaGTTCCTTTGGTCCCGTGTTACCCTCTGCCCCCTCCGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: WCQVFLLFGLRGIWQ*FLWSRVTLCPLRPL
Trigger: GAGGGGCCGGAGGGGGCAGAGGGTAACACGGGACCAAAGGAATCACTGCCAGATGCCTCGAAGGCCAAAGAGAAGAAAGACTTGGCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp CTCTCATGCTGCTGCAGGTGCTTGTACAGCTTCAGGCTGGCCTCGTaGCTGGAGTTGACTGTGTGCAGCCGCAGCTTCTCCAGGCTATTG +
Preference number: 5 (lower is better)
Translates to: LSCCCRCLYSFRLAS*LELTVCSRSFSRLL
Trigger: CAATAGCCTGGAGAAGCTGCGGCTGCACACAGTCAACTCCAGGCACGAGGCCAGCCTGAAGCTGTACAAGCACCTGCAGCAGCATGAGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GCCTCTTCGAAGAGAGCGGAGTCTCAGAGCTACCCGGGAAGGAGGTaGGTTTGGTGGTTGCAGGGGAATCCGTCAACTCCTTCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: ASSKRAESQSYPGRR*VWWLQGNPSTPSLP
Trigger: AGGCAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGACTCCGCTCTCTTCGAAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TTATACACGTGGCGGTCTGACACGGGCAGCTGGGGCCTCTTGGCGTaGACCTCGTTGAAATGGGTCTGCAGTGTGGCGGAGGTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: LYTWRSDTGSWGLLA*TSLKWVCSVAEVLK
Trigger: CTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCACGTGTATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TTCCTGAAAGGCAGAGCTCGCTTTGGCTCGGAGCCTGAATCCTCCTaGACTGACCCAGAGTCGCTGCCTGTCGGGCTCTGCTTATCTTCC +
Preference number: 5 (lower is better)
Translates to: FLKGRARFGSEPESS*TDPESLPVGLCLSS
Trigger: GGAAGATAAGCAGAGCCCGACAGGCAGCGACTCTGGGTCAGTGCAGGAGGATTCAGGCTCCGAGCCAAAGCGAGCTCTGCCTTTCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GTCTGGGCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTaGCTGGACGCAATCATATCCGCTAACTTCTTCCGGTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: VWACCCCCCCCCCCC*LDAIISANFFRLAS
Trigger: AGAGGCCAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GCGAGTGTCTGGGCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGTTGCCTGGACGCAATCATATCCGCTAACTTCTTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: ASVWACCCCCCCCCC*CCLDAIISANFFRL
Trigger: CAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TGGCTGTGCACTGGGAGGGTCGGCCTGCTTTGGCTTCTCATCGCTTaGCTCTGCTTTCGAGTTGAAGGTGGCCAGTTCATCAGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: WLCTGRVGLLWLLIA*LCFRVEGGQFISLR
Trigger: GCGGAGACTGATGAACTGGCCACCTTCAACTCGAAAGCAGAGGCAAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCACAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GCTGCTGGTGCTCCTGCCAGTGCTCGAAGGATGGGAACGCCAGCTTaGACTGGTCACACTGGTAGGGGATTAGCTGAGGAGGTAGGTTTG +
Preference number: 5 (lower is better)
Translates to: AAGAPASARRMGTPA*TGHTGRGLAEEVGL
Trigger: CAAACCTACCTCCTCAGCTAATCCCCTACCAGTGTGACCAGTGCAAGCTGGCGTTCCCATCCTTCGAGCACTGGCAGGAGCACCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TCGTCGCCGAAGCCCGCCTGGCACTTGCGGCAGACCAACTTGTACTaGACCTTTGGAACAATGAAGGGGTCACAGAGGGAGTCCGCACTT +
Preference number: 5 (lower is better)
Translates to: SSPKPAWHLRQTNLY*TFGTMKGSQRESAL
Trigger: AAGTGCGGACTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCTTCGGCGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp ACTAGAGCAGGCGTCATGGCGGCCATGGGCCCTGTAGGATCCAGCTaGAATCCACTCATCATGAACTGGGCATCCGAAGCGGTACTGTCC +
Preference number: 5 (lower is better)
Translates to: TRAGVMAAMGPVGSS*NPLIMNWASEAVLS
Trigger: GGACAGTACCGCTTCGGATGCCCAGTTCATGATGAGTGGATTCCAGCTGGATCCTACAGGGCCCATGGCCGCCATGACGCCTGCTCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TCGAAGAGAGCGGAGTCTCAGAGCTACCCGGGAAGGAGGTGCGTTTaGTGGTTGCAGGGGAATCCGTCAACTCCTTCTCTGCCTGACTGG +
Preference number: 5 (lower is better)
Translates to: SKRAESQSYPGRRCV*WLQGNPSTPSLPDW
Trigger: CCAGTCAGGCAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGACTCCGCTCTCTTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GGGCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTaGACGCAATCATATCCGCTAACTTCTTCCGGTTGGCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: GLAAAAAAAAAAAVA*TQSYPLTSSGWPLW
Trigger: CCAAAGAGGCCAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GGGAACTCAGCGAGGCTGAGGACGGTTTATTTGGTAATCCAGATGTaGGGAGGCCGGGGGAAGGTACCGTTGTGCTGGGCAGACCCATCA +
Preference number: 5 (lower is better)
Translates to: GNSARLRTVYLVIQM*GGRGKVPLCWADPS
Trigger: TGATGGGTCTGCCCAGCACAACGGTACCTTCCCCCGGCCTCCCCACATCTGGATTACCAAATAAACCGTCCTCAGCCTCGCTGAGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGGGATCCCGCACCCATaGTCCTTCCCCGAGACGACG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTGIPHP*SFPETT
Trigger: CGTCGTCTCGGGGAAGGACAATGGGTGCGGGATCCC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCCTTGCCACCCTCCTaGATGTGGGCCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTALPPS*MWATSW
Trigger: CCAGCTGGTGGCCCACATCAAGGAGGGTGGCAAGGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTGAGGAGGTAGGTTaGCCAGCTGTTGAGGGGTCG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAEEVG*PAVEGS
Trigger: CGACCCCTCAACAGCTGGCAAACCTACCTCCTCAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCTGTTGCGCTGTCGTaGTCGGCGTTGCCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPVALS*SALPSS
Trigger: GGACGAGGGCAACGCCGACAACGACAGCGCAACAGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TGCACTGGGAGGGTCGGCCTGCTTTGGCTTCTCATCGCTTGCCTCTaGTTTCGAGTTGAAGGTGGCCAGTTCATCAGTCTCCGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: CTGRVGLLWLLIACL*FRVEGGQFISLRCE
Trigger: CTCACAGCGGAGACTGATGAACTGGCCACCTTCAACTCGAAAGCAGAGGCAAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp AGCTTGGGCTGGGGTGCGTTTGTCTTCTGCTCCAGCTGCTCCAGCTaGTGCTGCATCTCTGGCTTTGGCTGTCCTTGCTTCTCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: SLGWGAFVFCSSCSS*CCISGFGCPCFSWV
Trigger: AACCCAAGAGAAGCAAGGACAGCCAAAGCCAGAGATGCAGCAGCAGCTGGAGCAGCTGGAGCAGAAGACAAACGCACCCCAGCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TTGCAGACGGCACATTGGAAGAGCTTCAGCGATGGGTCGTTGGTCTaGATGAAGCTCTCGCCCAGGTTCATCAGCTCCTCCGACACCAGC +
Preference number: 5 (lower is better)
Translates to: LQTAHWKSFSDGSLV*MKLSPRFISSSDTS
Trigger: GCTGGTGTCGGAGGAGCTGATGAACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp AAGAGAGCGGAGTCTCAGAGCTACCCGGGAAGGAGGTGCGTTTGGTaGTTGCAGGGGAATCCGTCAACTCCTTCTCTGCCTGACTGGATG +
Preference number: 5 (lower is better)
Translates to: KRAESQSYPGRRCVW*LQGNPSTPSLPDWM
Trigger: CATCCAGTCAGGCAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGACTCCGCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CAGCTGAGCTGGCAGAGTCTGCAGTGGCATTGTCTGCATCATCAGTaGCGAGAAGATGGGCAGCTCCATTGGCATGGAGAGCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: QLSWQSLQWHCLHHQ*REDGQLHWHGELGE
Trigger: CTCACCCAGCTCTCCATGCCAATGGAGCTGCCCATCTTCTCGCCACTGATGATGCAGACAATGCCACTGCAGACTCTGCCAGCTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGGGATCTGAGGGATGGCACCCGAGAGCAGCTGGCTGGCCAGGAGTaGGTTACTGGGATCAAACAGCATGAAAGGCATGTCCAACGACCT +
Preference number: 5 (lower is better)
Translates to: WDLRDGTREQLAGQE*VTGIKQHERHVQRP
Trigger: AGGTCGTTGGACATGCCTTTCATGCTGTTTGATCCCAGTAACCCACTCCTGGCCAGCCAGCTGCTCTCGGGTGCCATCCCTCAGATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp AGTCTAAGAGCATGGCAGACAGAGTCAGGTTGTAGCCGGCTCTCTTaGCTTCGTGCCAGTGTCGAGACCGGATATGAGCCTCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLRAWQTESGCSRLS*LRASVETGYEPPGL
Trigger: CAGCCCTGGAGGCTCATATCCGGTCTCGACACTGGCACGAAGCCAAGAGAGCCGGCTACAACCTGACTCTGTCTGCCATGCTCTTAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTGCAGCTGACCTCCTaGCTGGCGGGCTCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLQLTS*LAGSAG
Trigger: GCCCGCCGAGCCCGCCAGCAAGGAGGTCAGCTGCAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGAGCAAGGTCCTTTTaGCTGCTACCACCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRARSF*LLPPAG
Trigger: CCCCGCAGGTGGTAGCAGCAAAAAGGACCTTGCTCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGCCCCAGGTGGCGGTaGTGCTGGATCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSPRWR*CWIWVM
Trigger: CATGACCCAGATCCAGCACAACCGCCACCTGGGGCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACGCCGTGCTCCATGCTaGCAGGTGGCAAGATGTTCT +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRRAPC*QVARCS
Trigger: AGAACATCTTGCCACCTGCAAGCATGGAGCACGGCG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAAGGCAGAGCTCGCTTaGGCTCGGAGCCTGAATCCT +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQKAELA*ARSLNP
Trigger: AGGATTCAGGCTCCGAGCCAAAGCGAGCTCTGCCTT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTTGGCTGCCCGTGCCTaGGTCTGGTGCAGCACAGAC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLAARA*VWCSTD
Trigger: GTCTGTGCTGCACCAGACCAAGGCACGGGCAGCCAA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTTCCGGGTGTTGGCTaGGCTGCAGGAGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQFPGVG*AAGGLN
Trigger: ATTCAGCCCTCCTGCAGCCAAGCCAACACCCGGAAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTGGTGCGAGGCCTCTaGTTCTGTTGCTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLVRGL*FCCWSK
Trigger: CTTGCTCCAGCAACAGAACAAGAGGCCTCGCACCAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGTTCTCGAGGACCGCTaGCTCCCCCAGTACTCCTGC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTVLEDR*LPQYSC
Trigger: GCAGGAGTACTGGGGGAGCAAGCGGTCCTCGAGAAC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCTGGGGGACTGGGGTTaGGCTTGCTTTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLGDWG*ACFGLL
Trigger: CAGCAGCCCAAAGCAAGCCAAACCCCAGTCCCCCAG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GCTCCACGTTCATGTGCAGCCCCAGCATGTCCAGGTTGTCCGTCGTaGACTTGTTGCAGACGGCACATTGGAAGAGCTTCAGCGATGGGT +
Preference number: 5 (lower is better)
Translates to: APRSCAAPACPGCPS*TCCRRHIGRASAMG
Trigger: ACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCACATGAACGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp AAGAGCCTGAAGAGGGGCGTTGTCGAACATCCCTTGTTGTTGAGCTaGCAGTCCGAGGACCTCGTTAGCCTTCTTGATCCGGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KSLKRGVVEHPLLLS*QSEDLVSLLDPVQL
Trigger: GAGCTGGACCGGATCAAGAAGGCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTTCAGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CACTTGAGCGTCTTACACGAGTTACGAGAATGCATCATGGTCATGTaGCCGCCCAGCGAGCGTGAGGAGCCCAGGACCGTGTCACATTTG +
Preference number: 5 (lower is better)
Translates to: HLSVLHELRECIMVM*PPSEREEPRTVSHL
Trigger: CAAATGTGACACGGTCCTGGGCTCCTCACGCTCGCTGGGCGGCCACATGACCATGATGCATTCTCGTAACTCGTGTAAGACGCTCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GCCATGGGCCCTGTAGGATCCAGCTGGAATCCACTCATCATGAACTaGGCATCCGAAGCGGTACTGTCCATCTTCAGGTTGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AMGPVGSSWNPLIMN*ASEAVLSIFRLGRF
Trigger: GAACCTGCCCAACCTGAAGATGGACAGTACCGCTTCGGATGCCCAGTTCATGATGAGTGGATTCCAGCTGGATCCTACAGGGCCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GAGTGGAGCTGCAGCTTTTCAATGGTCTTGAAAGCCAGGCTGCACTaGTTGCAGCGGTACTTATACACGTGGCGGTCTGACACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: EWSCSFSMVLKARLH*LQRYLYTWRSDTGS
Trigger: GCTGCCCGTGTCAGACCGCCACGTGTATAAGTACCGCTGCAACCAGTGCAGCCTGGCTTTCAAGACCATTGAAAAGCTGCAGCTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GCTTTGGCTGTCCTTGCTTCTCTTGGGTTTGGTTTGGCTGTGCACTaGGAGGGTCGGCCTGCTTTGGCTTCTCATCGCTTGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: ALAVLASLGFGLAVH*EGRPALASHRLPLL
Trigger: AAGCAGAGGCAAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACCAAACCCAAGAGAAGCAAGGACAGCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CTGCATCTCTGGCTTTGGCTGTCCTTGCTTCTCTTGGGTTTGGTTTaGCTGTGCACTGGGAGGGTCGGCCTGCTTTGGCTTCTCATCGCT +
Preference number: 5 (lower is better)
Translates to: LHLWLWLSLLLLGLV*LCTGRVGLLWLLIA
Trigger: AGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACCAAACCCAAGAGAAGCAAGGACAGCCAAAGCCAGAGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TGCTGCTGCATCTCTGGCTTTGGCTGTCCTTGCTTCTCTTGGGTTTaGTTTGGCTGTGCACTGGGAGGGTCGGCCTGCTTTGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: CCCISGFGCPCFSWV*FGCALGGSACFGFS
Trigger: TGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACCAAACCCAAGAGAAGCAAGGACAGCCAAAGCCAGAGATGCAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATACTTCTGCACGTGCTaGTCCGTCTTGCAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQYFCTC*SVLQCS
Trigger: GCTGCACTGCAAGACGGACAAGCACGTGCAGAAGTA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCGATGGCCACACACTaGAGCCTCCACTCATTGGCC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPMATH*SLHSLA
Trigger: GGCCAATGAGTGGAGGCTCAAGTGTGTGGCCATCGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGCAGCCGCTGCAGCTaGCGCAGGCTCTCACTGCGC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCSRCS*RRLSLR
Trigger: GCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGCA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTTGCAGCCTCCAGCTaGGCTGCCCGTGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLAASS*AARALV
Trigger: GACCAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGCGGTAAAGGTGTTGTaGGCGCCGCTGCTGCCCACG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALAVKVL*APLLPT
Trigger: CGTGGGCAGCAGCGGCGCCAACAACACCTTTACCGC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAATGTTGGAGAAGAGCTaGCCGCAGGAGTCACACTCC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQMLEKS*PQESHS
Trigger: GGAGTGTGACTCCTGCGGCAAGCTCTTCTCCAACAT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGGCCTCTTGTTCTGTaGCTGGAGCAAGGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRPLVL*LEQGGV
Trigger: AACCCCACCTTGCTCCAGCAACAGAACAAGAGGCCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGGAGGGTTGCTGAAGTaGTACGGGGAGTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQGGLLK*YGESLF
Trigger: GAACAAGGACTCCCCGTACAACTTCAGCAACCCTCC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAACCTCGTTAGCCTTCTaGATCCGGTCCAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQTSLAF*IRSSSC
Trigger: GCAAGAGCTGGACCGGATCAAGAAGGCTAACGAGGT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCTTTGGCAGGGTCTTaGTCTGGGGAAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSLAGS*SGEAGP
Trigger: GGGGCCTGCTTCCCCAGACAAAGACCCTGCCAAAGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp TCTTTGATCTGCTCCTCACTGGGGGAGTTGTTAATGTCGAAGTACTaGCTGAGCACTCGGAGCTGGTCATCCGTGATCCTGGTGCGAGGC +
Preference number: 5 (lower is better)
Translates to: SLICSSLGELLMSKY*LSTRSWSSVILVRG
Trigger: GCCTCGCACCAGGATCACGGATGACCAGCTCCGAGTGCTCAGGCAGTACTTCGACATTAACAACTCCCCCAGTGAGGAGCAGATCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GTCGTTGTCGGCGTTGCCCTCGTCCCCTGTCGTGGTGTCTGTGATTaGGGTGTTGACCGAGGAACAGTCATCATTGTCCAGCTTAGTTTG +
Preference number: 5 (lower is better)
Translates to: VVVGVALVPCRGVCD*GVDRGTVIIVQLSL
Trigger: CAAACTAAGCTGGACAATGATGACTGTTCCTCGGTCAACACCGCAATCACAGACACCACGACAGGGGACGAGGGCAACGCCGACAACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp GGGACTGGGGTTTGGCTTGCTTTGGGCTGCTGCTGCTGCTGCTGCTaGTGCTGTACTTTTTGTTGCTGTTGCTGCTGCTGTTGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: GTGVWLALGCCCCCC*CCTFCCCCCCCCCS
Trigger: ACTACAGCAACAGCAGCAGCAACAGCAACAAAAAGTACAGCAGCAGCAGCAGCAGCAGCAGCAGCCCAAAGCAAGCCAAACCCCAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TTCCGCTCCTCTTCGCTCAGGGTCATTCGATGGTCGTGCACCGCGTaGGTCACAAATGAACGCACATACCCAAAGGAGAGTTTGCACAGG +
Preference number: 5 (lower is better)
Translates to: FRSSSLRVIRWSCTA*VTNERTYPKESLHR
Trigger: CCTGTGCAAACTCTCCTTTGGGTATGTGCGTTCATTTGTGACCCACGCGGTGCACGACCATCGAATGACCCTGAGCGAAGAGGAGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CGTCGTGAACTTGTTGCAGACGGCACATTGGAAGAGCTTCAGCGATaGGTCGTTGGTCTGGATGAAGCTCTCGCCCAGGTTCATCAGCTC +
Preference number: 5 (lower is better)
Translates to: RRELVADGTLEELQR*VVGLDEALAQVHQL
Trigger: GAGCTGATGAACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GAAGCCCGCCTGGCACTTGCGGCAGACCAACTTGTACTGCACCTTTaGAACAATGAAGGGGTCACAGAGGGAGTCCGCACTTGCACTTTT +
Preference number: 5 (lower is better)
Translates to: EARLALAADQLVLHL*NNEGVTEGVRTCTF
Trigger: AAAAGTGCAAGTGCGGACTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGATACGCAGGAGCTTTaGGCAGAACCATCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQDTQEL*AEPSLF
Trigger: GAACAGCGATGGTTCTGCCAAAAGCTCCTGCGTATC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACCTCCTCCAGGTCATTaGGAAAGAGTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQPPPGH*ERVLCS
Trigger: GCTGCAAAGGACTCTTTCCAAATGACCTGGAGGAGG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTGTCCGTCGTGAACTaGTTGCAGACGGCACATTGG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLSVVN*LQTAHW
Trigger: CCAATGTGCCGTCTGCAACAAGTTCACGACGGACAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCCTTGCCACCCTCCTaGATGTGGGCCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHALPPS*MWATSW
Trigger: CCAGCTGGTGGCCCACATCAAGGAGGGTGGCAAGGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGCCTCGTGCCTGGAGTaGACTGTGTGCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHASCLE*TVCSRS
Trigger: GCTGCGGCTGCACACAGTCAACTCCAGGCACGAGGC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGTGTGGCGGAGGTTTaGAAGACCTGGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSVAEV*KTWLHP
Trigger: GGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCCAGGCTGCACTGGTaGCAGCGGTACTTATACACG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTARLHW*QRYLYT
Trigger: CGTGTATAAGTACCGCTGCAACCAGTGCAGCCTGGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTTGCAGCCTCCAGCTaGGCTGCCCGTGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLAASS*AARALV
Trigger: GACCAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTAACTTCTTCCGGTaGGCCTCTTTGGGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQANFFR*ASLGSE
Trigger: TTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCTGGTGATGGGAGGGTaGCTGAAGTTGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLVMGG*LKLYGE
Trigger: CTCCCCGTACAACTTCAGCAACCCTCCCATCACCAG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCCTCTGCTTTCGAGTaGAAGGTGGCCAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQASAFE*KVASSS
Trigger: TGATGAACTGGCCACCTTCAACTCGAAAGCAGAGGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTGCATCTCTGGCTTaGGCTGTCCTTGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAASLA*AVLASL
Trigger: AAGAGAAGCAAGGACAGCCAAAGCCAGAGATGCAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGACAGCTCCATGGTTTaGCTCACGGGCGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTDSSMV*LTGERG
Trigger: GCCCCTCTCGCCCGTGAGCAAAACCATGGAGCTGTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGCCATCATGGCTGCTTaGGTCAACCCCTCGTTCGGT +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTAIMAA*VNPSFG
Trigger: ACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCGGGGGAAGGTACCGTaGTGCTGGGCAGACCCATCA +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALRGKVP*CWADPS
Trigger: TGATGGGTCTGCCCAGCACAACGGTACCTTCCCCCG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGTGGCTGAGGGGCCATaGCCATGGTGGCTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTVAEGP*PWWLVL
Trigger: CAGCACAAGCCACCATGGCAATGGCCCCTCAGCCAC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTGGCTGAGGGGCCATaGCCATGGTGGCTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALVAEGP*PWWLVL
Trigger: CAGCACAAGCCACCATGGCAATGGCCCCTCAGCCAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp ATCACTTTCTGGGGCAGGCCCGACTTGTCCGCCATCTCTTTGATCTaGTCCTCACTGGGGGAGTTGTTAATGTCGAAGTACTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: ITFWGRPDLSAISLI*SSLGELLMSKYCLS
Trigger: GCTCAGGCAGTACTTCGACATTAACAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCAGAAAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp ACTGGGGTTTGGCTTGCTTTGGGCTGCTGCTGCTGCTGCTGCTGCTaGTGTACTTTTTGTTGCTGTTGCTGCTGCTGTTGCTGTAGTTGC +
Preference number: 5 (lower is better)
Translates to: TGVWLALGCCCCCCC*CTFCCCCCCCCCSC
Trigger: GCAACTACAGCAACAGCAGCAGCAACAGCAACAAAAAGTACAGCAGCAGCAGCAGCAGCAGCAGCAGCCCAAAGCAAGCCAAACCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp AGCATGTCCAGGTTGTCCGTCGTGAACTTGTTGCAGACGGCACATTaGAAGAGCTTCAGCGATGGGTCGTTGGTCTGGATGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: SMSRLSVVNLLQTAH*KSFSDGSLVWMKLS
Trigger: CGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp ACCTCGTTGAAATGGGTCTGCAGTGTGGCGGAGGTTTTGAAGACCTaGTTGCACCCCTTCTTCCAGCAGAGGAAGCCTGAGTCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: TSLKWVCSVAEVLKT*LHPFFQQRKPESSL
Trigger: GAGAGAAGACTCAGGCTTCCTCTGCTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGAGGCTGAGCACTCGTaGCAGCTGACCTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTEAEHS*QLTSLL
Trigger: CAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAGCTATGTGGAAAGTGTaGATGATCTGCGGGTACACG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQAMWKV*MICGYT
Trigger: CGTGTACCCGCAGATCATCAACACTTTCCACATAGC...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTTGGAAAGAGTCCTTaGCAGCCCTCCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQFGKSP*QPSSSS
Trigger: AGAGGAAGAGGAGGGCTGCAAAGGACTCTTTCCAAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCCGATGGCCACACACTaGAGCCTCCACTCATTGGCC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALPMATH*SLHSLA
Trigger: GGCCAATGAGTGGAGGCTCAAGTGTGTGGCCATCGG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTTCCGGTTGGCCTCTTaGGGCTCTGAAGGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALFRLAS*GSEGEA
Trigger: CGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGAA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGGGGCAGGCCCGACTaGTCCGCCATCTCTTTGATC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALWGRPD*SAISLI
Trigger: GATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGCCGGGAGTCGATCTaGAGTTCCTCCAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALGRESI*SSSRLV
Trigger: CACCAGTCTGGAGGAACTCAAGATCGACTCCCGGCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGGGCTGGGGTGCGTTaGTCTTCTGCTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALWAGVR*SSAPAA
Trigger: AGCAGCTGGAGCAGAAGACAAACGCACCCCAGCCCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCGGCTGCGGGAGCTaGGGCTGGGGTGCGTTTGTC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPAGCGS*GWGAFV
Trigger: GACAAACGCACCCCAGCCCAAGCTCCCGCAGCCGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCTTTGGCAGGGTCTTaGTCTGGGGAAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSLAGS*SGEAGP
Trigger: GGGGCCTGCTTCCCCAGACAAAGACCCTGCCAAAGA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTGCGGCAGACCAACTaGTACTGCACCTTTGGAACA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLRQTN*YCTFGT
Trigger: TGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGGCAGCTGGGGTCTTaGGGACCCTCCACCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGQLGS*GPSTGL
Trigger: GAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTCAGACCACTGTCCTaGGGGCAGCTGGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALVRPLS*GQLGSL
Trigger: CAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp AATAAGGAGAAAAGCCCGGTACAAAGTAAGGAAGGAACTGGCTCGTaGGCAAAGCTGTGGGGTCTGAAGTCAAGGCCGCCTGTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: NKEKSPVQSKEGTGS*AKLWGLKSRPPVGP
Trigger: AGGCCCTACAGGCGGCCTTGACTTCAGACCCCACAGCTTTGCTCACGAGCCAGTTCCTTCCTTACTTTGTACCGGGCTTTTCTCCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp CCTGGCACTTGCGGCAGACCAACTTGTACTGCACCTTTGGAACAATaGAGGGGTCACAGAGGGAGTCCGCACTTGCACTTTTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: PGTCGRPTCTAPLEQ*RGHRGSPHLHFCFL
Trigger: CAGAAAGCAAAAGTGCAAGTGCGGACTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp CTAAGAAGTTTCCGCTCCTCTTCGCTCAGGGTCATTCGATGGTCGTaGACCGCGTGGGTCACAAATGAACGCACATACCCAAAGGAGAGT +
Preference number: 5 (lower is better)
Translates to: LRSFRSSSLRVIRWS*TAWVTNERTYPKES
Trigger: ACTCTCCTTTGGGTATGTGCGTTCATTTGTGACCCACGCGGTGCACGACCATCGAATGACCCTGAGCGAAGAGGAGCGGAAACTTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 90 bp CTCGGACATTGCCATCATGGCTGCTTTGGTCAACCCCTCGTTCGGTaGCGAAGATTTGGTTTCAGTCGCTATTCCTGTTGCGCTGTCGTT +
Preference number: 5 (lower is better)
Translates to: LGHCHHGCFGQPLVR*RRFGFSRYSCCAVV
Trigger: AACGACAGCGCAACAGGAATAGCGACTGAAACCAAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCTGCCCCAGAGTCCTaGCCCTCTGAGGATTTGGTA +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTAAPES*PSEDLV
Trigger: TACCAAATCCTCAGAGGGCAAGGACTCTGGGGCAGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAAAGGTTCTGCATGTTGTaGAGATGTTTGTCGGACTGC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQRFCML*RCLSDC
Trigger: GCAGTCCGACAAACATCTCAACAACATGCAGAACCT...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACACCGCCACGTGGGTTaGGTTTTTGGTTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTHRHVG*VFGLVG
Trigger: CCCCACCAAACCAAAAACCAAACCCACGTGGCGGTG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTCCACTCATTGGCCTaGCCACCCTCCTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALLHSLA*PPSLMW
Trigger: CCACATCAAGGAGGGTGGCAAGGCCAATGAGTGGAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGAGCCTCCACTCATaGGCCTTGCCACCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLSLHS*ALPPSL
Trigger: CAAGGAGGGTGGCAAGGCCAATGAGTGGAGGCTCAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACACTTAAACGGCTTATaGTCCGGGCTGCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTHLNGL*SGLLVG
Trigger: GCCCACCAGCAGCCCGGACAATAAGCCGTTTAAGTG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATGGCTGTACGCCACGTaGCAAGTGTTACACTTAAAC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQWLYAT*QVLHLN
Trigger: GTTTAAGTGTAACACTTGCAACGTGGCGTACAGCCA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGCGGCACTGCTTGGATaGGTGGCGGTAAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTAALLG*VAVKVL
Trigger: CAACACCTTTACCGCCACCAATCCAAGCAGTGCCGC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTCCGTTGCCGCTCCTaGAATAGAGTGTTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQFRCRS*NRVFLN
Trigger: GTTCAGAAACACTCTATTCAAGGAGCGGCAACGGAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGCCGGGAGTCGATCTaGAGTTCCTCCAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGRESI*SSSRLV
Trigger: CACCAGTCTGGAGGAACTCAAGATCGACTCCCGGCC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGGGCTGGGGTGCGTTaGTCTTCTGCTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHWAGVR*SSAPAA
Trigger: AGCAGCTGGAGCAGAAGACAAACGCACCCCAGCCCA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCCGGCTGCGGGAGCTaGGGCTGGGGTGCGTTTGTC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAGCGS*GWGAFV
Trigger: GACAAACGCACCCCAGCCCAAGCTCCCGCAGCCGGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGGGGTCCGCGAGGCTaGAGGTTTCACTGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALRGPRG*RFHCSP
Trigger: TGGACTACAGTGAAACCTCAAGCCTCGCGGACCCCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGTTGTCGAACATCCCTaGTTGTTGAGCTGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTVVEHP*LLSCQS
Trigger: GGACTGGCAGCTCAACAACAAGGGATGTTCGACAAC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACTGAGGACGGTTTATTaGGTAATCCAGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLRTVY*VIQMWG
Trigger: TCCCCACATCTGGATTACCAAATAAACCGTCCTCAG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCGGTCCGTCGGACTTTaGGCTGAGATCCGTGTCAGA +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALRSVGL*AEIRVR
Trigger: TCTGACACGGATCTCAGCCAAAAGTCCGACGGACCG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GGTGCGAGACGGAGTTGTAGTGCACCAGCAGGATATTCTTTTGAGTaGAGGATTCCTTGCAGACCGTACACTTGTAAGGGCGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GARRSCSAPAGYSFE*RIPCRPYTCKGGKG
Trigger: ACCCTTCCCGCCCTTACAAGTGTACGGTCTGCAAGGAATCCTTCACTCAAAAGAATATCCTGCTGGTGCACTACAACTCCGTCTCGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp AGTCCGAGGACCTCGTTAGCCTTCTTGATCCGGTCCAGCTCTTGCTaGGCCATCAACTGGCGTACAGTGGCTGGGTCAAAATATTCTTTC +
Preference number: 5 (lower is better)
Translates to: SPRTSLAFLIRSSSC*AINWRTVAGSKYSF
Trigger: GAAAGAATATTTTGACCCAGCCACTGTACGCCAGTTGATGGCTCAGCAAGAGCTGGACCGGATCAAGAAGGCTAACGAGGTCCTCGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CGCTCCTTGAATAGAGTGTTTCTGAACCAGTGCTTGATCACTTTCTaGGGCAGGCCCGACTTGTCCGCCATCTCTTTGATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RSLNRVFLNQCLITF*GRPDLSAISLICSS
Trigger: TGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCAGAAAGTGATCAAGCACTGGTTCAGAAACACTCTATTCAAGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CCAGACCAGATGACAACCGGTCTTCATACTCGGACATTGCCATCATaGCTGCTTTGGTCAACCCCTCGTTCGGTGCCGAAGATTTGGTTT +
Preference number: 5 (lower is better)
Translates to: PDQMTTGLHTRTLPS*LLWSTPRSVPKIWF
Trigger: AAACCAAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCGGTTGTCATCTGGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATTGTTGGGAACATCTTaGGATACGCAGGAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQLLGTS*DTQELL
Trigger: CAAAAGCTCCTGCGTATCCAAAGATGTTCCCAACAA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGTTGCAGACGGCACATaGGAAGAGCTTCAGCGATGG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTVADGT*EELQRW
Trigger: CCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAAC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCCAGCATGTCCAGGTaGTCCGTCGTGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPSMSR*SVVNLL
Trigger: CAACAAGTTCACGACGGACAACCTGGACATGCTGGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATACTTCTGCACGTGCTaGTCCGTCTTGCAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTYFCTC*SVLQCS
Trigger: GCTGCACTGCAAGACGGACAAGCACGTGCAGAAGTA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTCAGGTGCACAGGGTaGCCGATGGCCACACACTTG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHFRCTG*PMATHL
Trigger: CAAGTGTGTGGCCATCGGCAACCCTGTGCACCTGAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATACATCTGCTCGGGTTaGATCTCCTCTGATGCTTTT +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQYICSG*ISSDAF
Trigger: AAAAGCATCAGAGGAGATCAAACCCGAGCAGATGTA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGTGGCGGTAAAGGTGTaGTTGGCGCCGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPVAVKV*LAPLLP
Trigger: GGGCAGCAGCGGCGCCAACAACACCTTTACCGCCAC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTTCCGGGTGTTGGCTaGGCTGCAGGAGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHFPGVG*AAGGLN
Trigger: ATTCAGCCCTCCTGCAGCCAAGCCAACACCCGGAAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGAGTCTGCAGTGGCATaGTCTGCATCATCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALESAVA*SASSVA
Trigger: CGCCACTGATGATGCAGACAATGCCACTGCAGACTC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGCCTCTTGTTCTGTaGCTGGAGCAAGGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRPLVL*LEQGGV
Trigger: AACCCCACCTTGCTCCAGCAACAGAACAAGAGGCCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAGGGCTGTCTTGGCCTaGAAGAGAGCTCGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALRAVLA*KRARQK
Trigger: CTTTTGCCGAGCTCTCTTCAAGGCCAAGACAGCCCT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCTGTTGCGCTGTCGTaGTCGGCGTTGCCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPVALS*SALPSS
Trigger: GGACGAGGGCAACGCCGACAACGACAGCGCAACAGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAGGGGTCCGCGAGGCTaGAGGTTTCACTGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHRGPRG*RFHCSP
Trigger: TGGACTACAGTGAAACCTCAAGCCTCGCGGACCCCT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAATCATTAAAGCATGACTaGAGGACCTTCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQSLKHD*RTFSCR
Trigger: TCTGCAGCTGAAGGTCCTCAAGTCATGCTTTAATGA...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGAACATCCCTTGTTGTaGAGCTGCCAGTCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTEHPLL*SCQSED
Trigger: GTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGTCGAACATCCCTTGTaGTTGAGCTGCCAGTCCGAG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALVEHPL*LSCQSE
Trigger: CTCGGACTGGCAGCTCAACAACAAGGGATGTTCGAC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGATGAAGCACCATCTCTaGCAGGTTCACCACAGACTG +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTMKHHL*QVHHRL
Trigger: CAGTCTGTGGTGAACCTGCAAGAGATGGTGCTTCAT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGGTGATTGTTCTGTGTTaGTGCAAGGCCGACTCGAGA +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTVIVLC*CKADSR
Trigger: TCTCGAGTCGGCCTTGCACAAACACAGAACAATCAC...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TCATTAAAGCATGACTTGAGGACCTTCAGCTGCAGATTGGTCATTTaGGTGCGAAAACGTTTCTGCCCAGGTCGATCCCCGCCGTCACCA +
Preference number: 5 (lower is better)
Translates to: SLKHDLRTFSCRLVI*VRKRFCPGRSPPSP
Trigger: TGGTGACGGCGGGGATCGACCTGGGCAGAAACGTTTTCGCACTCAAATGACCAATCTGCAGCTGAAGGTCCTCAAGTCATGCTTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp GTTGAGAAAAGATATGGTCACGTACAGACAGCCTCGCGCTGTACTTaGTGCCACACAAAGTGCACTCGGTCTTGGGTCCCTCATAACTCG +
Preference number: 5 (lower is better)
Translates to: VEKRYGHVQTASRCT*CHTKCTRSWVPHNS
Trigger: CGAGTTATGAGGGACCCAAGACCGAGTGCACTTTGTGTGGCATCAAGTACAGCGCGAGGCTGTCTGTACGTGACCATATCTTTTCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp TTATTGCTAAGAAGTTTCCGCTCCTCTTCGCTCAGGGTCATTCGATaGTCGTGCACCGCGTGGGTCACAAATGAACGCACATACCCAAAG +
Preference number: 5 (lower is better)
Translates to: LLLRSFRSSSLRVIR*SCTAWVTNERTYPK
Trigger: CTTTGGGTATGTGCGTTCATTTGTGACCCACGCGGTGCACGACCATCGAATGACCCTGAGCGAAGAGGAGCGGAAACTTCTTAGCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp ATGACAACCGGTCTTCATACTCGGACATTGCCATCATGGCTGCTTTaGTCAACCCCTCGTTCGGTGCCGAAGATTTGGTTTCAGTCGCTA +
Preference number: 5 (lower is better)
Translates to: MTTGLHTRTLPSWLL*STPRSVPKIWFQSL
Trigger: TAGCGACTGAAACCAAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCGGTTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCCATGCTACTGGGTTaGTCGGGGAGGTGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSMLLG*SGRWAL
Trigger: CAGCGCCCACCTCCCCGACAAACCCAGTAGCATGGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTGCAGCTGACCTCCTaGCTGGCGGGCTCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLQLTS*LAGSAG
Trigger: GCCCGCCGAGCCCGCCAGCAAGGAGGTCAGCTGCAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGATACGCAGGAGCTTTaGGCAGAACCATCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALDTQEL*AEPSLF
Trigger: GAACAGCGATGGTTCTGCCAAAAGCTCCTGCGTATC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGGGGTTCCTTGTCTTaGCCAATCCCTTGGATGATA +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTRGSLS*PIPWMI
Trigger: TATCATCCAAGGGATTGGCAAAGACAAGGAACCCCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTGCAGGTTCTGCATGTaGTTGAGATGTTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTCRFCM*LRCLSD
Trigger: GTCCGACAAACATCTCAACAACATGCAGAACCTGCA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACTGTCCATCTTCAGGTaGGGCAGGTTCATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLSIFR*GRFMFW
Trigger: CCAGAACATGAACCTGCCCAACCTGAAGATGGACAG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTTCAGCGATGGGTCGTaGGTCTGGATGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHFSDGS*VWMKLS
Trigger: CGAGAGCTTCATCCAGACCAACGACCCATCGCTGAA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCCGTCGTGAACTTGTaGCAGACGGCACATTGGAAG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSVVNL*QTAHWK
Trigger: CTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGCAGCTGGGGCCTCTaGGCGTGCACCTCGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGSWGL*ACTSLK
Trigger: TTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGTGGCGGTAAAGGTGTaGTTGGCGCCGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEVAVKV*LAPLLP
Trigger: GGGCAGCAGCGGCGCCAACAACACCTTTACCGCCAC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTGCTGCTGCTGCTGTaGCCTGGACGCAATCATATC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLLLLL*PGRNHI
Trigger: GATATGATTGCGTCCAGGCAACAGCAGCAGCAGCAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGAGCTTCTTCTGGTGTTaGATGAGGTCAAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSFFWC*MRSKMR
Trigger: GCGCATCTTTGACCTCATCAAACACCAGAAGAAGCT...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGCTTCTCTTGGGTTaGGTTTGGCTGTGCACTGGG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLLLLG*VWLCTG
Trigger: CCCAGTGCACAGCCAAACCAAACCCAAGAGAAGCAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTCCTCCAGCTTCCTCTaGAGCGTGTTCATCGTGGAG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHSSSFL*SVFIVE
Trigger: CTCCACGATGAACACGCTCAAGAGGAAGCTGGAGGA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCTCCAGGGCTGTCTaGGCCTTGAAGAGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPASRAV*ALKRAR
Trigger: CCGAGCTCTCTTCAAGGCCAAGACAGCCCTGGAGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCTGAGGACGGTTTATTaGGTAATCCAGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTLRTVY*VIQMWG
Trigger: TCCCCACATCTGGATTACCAAATAAACCGTCCTCAG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACGGTTTGGGGGATTCTTaGGCAGGGTCTTTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHGLGDS*AGSLSG
Trigger: CCCAGACAAAGACCCTGCCAAAGAATCCCCCAAACC...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTCTGCTCTTCTGGTTaGGGGGATTCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTFCSSG*GDSLAG
Trigger: CCCTGCCAAAGAATCCCCCAAACCAGAAGAGCAGAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGGCAGCTGGGGTCTTaGGGACCCTCCACCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGQLGS*GPSTGL
Trigger: GAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp ATATTCCTTGCTATAAAAGCTCGGGGCTGGGCTGACCAGACCAGATaGCAACCGGTCTTCATACTCGGACATTGCCATCATGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: IFLAIKARGWADQTR*QPVFILGHCHHGCF
Trigger: AAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCGGTTGTCATCTGGTCTGGTCAGCCCAGCCCCGAGCTTTTATAGCAAGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TACCTTCGTTGTCATATTCCTTGCTATAAAAGCTCGGGGCTGGGCTaGCCAGACCAGATGACAACCGGTCTTCATACTCGGACATTGCCA +
Preference number: 5 (lower is better)
Translates to: YLRCHIPCYKSSGLG*PDQMTTGLHTRTLP
Trigger: TGGCAATGTCCGAGTATGAAGACCGGTTGTCATCTGGTCTGGTCAGCCCAGCCCCGAGCTTTTATAGCAAGGAATATGACAACGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGGGAGGTGGGCGCTGTaGAGTTCAGTCCATTGCCGG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEGRWAL*SSVHCR
Trigger: CCGGCAATGGACTGAACTCAACAGCGCCCACCTCCC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTGCCCTCTGCCACGTaGGCCCTGACGCCCTCACTG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLPSAT*ALTPSL
Trigger: CAGTGAGGGCGTCAGGGCCAACGTGGCAGAGGGCAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTCTCCTCTGATGCTTTaGGCCTCTTCGAAGAGAGCG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHSPLML*ASSKRA
Trigger: CGCTCTCTTCGAAGAGGCCAAAAGCATCAGAGGAGA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGGTGGATCTTGTTGTaGAGCATGTCTTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRWILL*SMSWHR
Trigger: CCTGTGCCAAGACATGCTCAACAACAAGATCCACCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGGAGGTGGATCTTGTaGTTGAGCATGTCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTWRWIL*LSMSWH
Trigger: GTGCCAAGACATGCTCAACAACAAGATCCACCTCCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATCAGCAGAGGTCGGCTaGAGGTCCCCGCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSAEVG*RSPPCS
Trigger: GGAGCACGGCGGGGACCTCAAGCCGACCTCTGCTGA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACGTTGCTGTTCCCACTaGCAGCCTCCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRCCSH*QPPAWL
Trigger: CAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAAGGGGAAGCGATGTaGGCACTGATGGGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPEGEAM*ALMGFP
Trigger: GGGGAACCCCATCAGTGCCAACATCGCTTCCCCTTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATGCTCTCTGTATTGCTaGGCAAACCTCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTCSLYC*ANLSSC
Trigger: ACAGCTGGAGAGGTTTGCCAAGCAATACAGAGAGCA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCCTCACTGGGGGAGTaGTTAATGTCGAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALSSLGE*LMSKYC
Trigger: GCAGTACTTCGACATTAACAACTCCCCCAGTGAGGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCCATACAGTGCATGCCGGGCTCCTCTGTGCTATCAACGTGGGGCAGTTCTCAACAAATTCATCATCCTTaGGGTAAGCATTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: PIQCMPGSSVLSTWGSSQQIHHP*GKHWHQ
Trigger: TTGATGCCAATGCTTACCCAAAGGATGATGAATTTG...TTGAGAACTGCCCCACGTTGATAGCACAGAGGAGCCCGGCATGCACTGTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTGTCCTTGCTTCTCTaGGGTTTGGTTTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLSLLL*GLVWLC
Trigger: GCACAGCCAAACCAAACCCAAGAGAAGCAAGGACAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCCTCCAGGGCTGTCTaGGCCTTGAAGAGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEASRAV*ALKRAR
Trigger: CCGAGCTCTCTTCAAGGCCAAGACAGCCCTGGAGGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCAATGTCTCCCTTCATTaGGAGTCCCCCATCACAGTC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALNVSLH*ESPITV
Trigger: GACTGTGATGGGGGACTCCAAATGAAGGGAGACATT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGACAGCTCCATGGTTTaGCTCACGGGCGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEDSSMV*LTGERG
Trigger: GCCCCTCTCGCCCGTGAGCAAAACCATGGAGCTGTC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTCATTAAAGCATGACTaGAGGACCTTCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTSLKHD*RTFSCR
Trigger: TCTGCAGCTGAAGGTCCTCAAGTCATGCTTTAATGA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCGGCAATCCAATGTCATaGCCTAGAACCTCACACTCC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALGNPMS*PRTSHS
Trigger: GGAGTGTGAGGTTCTAGGCAATGACATTGGATTGCC...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGCCTGAACAACTCTCTTaGGCAATCCAATGTCATTGC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTPEQLS*AIQCHC
Trigger: GCAATGACATTGGATTGCCAAAGAGAGTTGTTCAGG...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAGAGGGAGTCCGCACTaGCACTTTTGCTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTRGSPH*HFCFLL
Trigger: AAGCAGAAAGCAAAAGTGCAAGTGCGGACTCCCTCT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGCGGCAGACCAACTaGTACTGCACCTTTGGAACA +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLRQTN*YCTFGT
Trigger: TGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAAAACTAGGGTGCTCTTaGGCGTTTCTTGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTKLGCS*AFLAAL
Trigger: GAGAGCAGCAAGAAACGCCAAAGAGCACCCTAGTTT...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TATCATAGTGCTCTCTGTATTGCTTGGCAAACCTCTCCAGCTGTTTaGAGGGGAAGTAGTTCTGATGCACGTGCTCCTGGTGGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: YHSALCIAWQTSPAV*RGSSSDARAPGGSS
Trigger: TGAAGAGCCACCAGGAGCACGTGCATCAGAACTACTTCCCCTTCAAACAGCTGGAGAGGTTTGCCAAGCAATACAGAGAGCACTATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp GAAGCAGAGTTAGAAGTAGTAGAAGCTGGGCCCCTCGACAGGGTCTaGAGCACATTAGGCATTAAGGGGGAGTTAGAAATGCTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: EAELEVVEAGPLDRV*STLGIKGELEMLWF
Trigger: AAACCAAAGCATTTCTAACTCCCCCTTAATGCCTAATGTGCTCCAGACCCTGTCGAGGGGCCCAGCTTCTACTACTTCTAACTCTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp CGGTCTTGGGTCCCTCATAACTCGTTTGGTTTATCCCAAAATGCTTaGCCATGCTTAACTTGGACTTCTTCTCTTTCGCCCGGGCATTCT +
Preference number: 5 (lower is better)
Translates to: RSWVPHNSFGLSQNA*PCLTWTSSLSPGHS
Trigger: AGAATGCCCGGGCGAAAGAGAAGAAGTCCAAGTTAAGCATGGCCAAGCATTTTGGGATAAACCAAACGAGTTATGAGGGACCCAAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGGACCGTGTCACATTaGGGGCACTCCACACCGCTA +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRTVSH*GHSTPL
Trigger: TAGCGGTGTGGAGTGCCCCAAATGTGACACGGTCCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCCTGGGTCATGTTCTGTaGAAGCAGCATCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALLGHVL*KQHHVV
Trigger: CACAACATGATGCTGCTTCAACAGAACATGACCCAG...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGTGTGGCGGAGGTTTaGAAGACCTGGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSVAEV*KTWLHP
Trigger: GGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGCCAGGCTGCACTGGTaGCAGCGGTACTTATACACG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPARLHW*QRYLYT
Trigger: CGTGTATAAGTACCGCTGCAACCAGTGCAGCCTGGC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTGGCTGTACGCCACGTaGCAAGTGTTACACTTAAAC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALWLYAT*QVLHLN
Trigger: GTTTAAGTGTAACACTTGCAACGTGGCGTACAGCCA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCGTTGCTGTTCCCACTaGCAGCCTCCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERCCSH*QPPAWL
Trigger: CAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGATCAGGGCGGCCTGTaGCTGCAGCTCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQDQGGL*LQLLLQ
Trigger: CTGCAGCAGGAGCTGCAGCAACAGGCCGCCCTGATC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTTCAGAATCAAGATGTaGGAGAAGAGCTTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALFRIKM*EKSLPQ
Trigger: CTGCGGCAAGCTCTTCTCCAACATCTTGATTCTGAA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTTCCGTTGCCGCTCCTaGAATAGAGTGTTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALFRCRS*NRVFLN
Trigger: GTTCAGAAACACTCTATTCAAGGAGCGGCAACGGAA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACATGGAGTCCTCGTTTaGGCTGTCATCCTGCCCCTC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPHGVLV*AVILPL
Trigger: GAGGGGCAGGATGACAGCCAAAACGAGGACTCCATG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTTGGCCATGCTTAACTaGGACTTCTTCTCTTTCGCC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALLAMLN*DFFSFA
Trigger: GGCGAAAGAGAAGAAGTCCAAGTTAAGCATGGCCAA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp ATATGTGTGTGTGTGGGTGGGTGGTGCGGCTGGAGAGGAACTCGTTCATTAACGTTTATCCCAAAATGCTaGGCCATGCTTAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: ICVCVGGWCGWRGTRSLTFIPKC*AMLNLD
Trigger: GTCCAAGTTAAGCATGGCCAAGCATTTTGGGATAAA...CGTTAATGAACGAGTTCCTCTCCAGCCGCACCACCCACCCACACACACACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACAAACTAGGGTGCTCTTaGGCGTTTCTTGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHKLGCS*AFLAAL
Trigger: GAGAGCAGCAAGAAACGCCAAAGAGCACCCTAGTTT...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGTCAGACCACTGTCCTaGGGGCAGCTGGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEVRPLS*GQLGSL
Trigger: CAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGAC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 90 bp TCCAGCTGGCTTCCAATGGTGTCCTTAACTTTGGAGATATGCTGTTaGGAAAAGATATGGTCACGTACAGACAGCCTCGCGCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: SSWLPMVSLTLEICC*EKIWSRTDSLALYL
Trigger: CAAGTACAGCGCGAGGCTGTCTGTACGTGACCATATCTTTTCTCAACAGCATATCTCCAAAGTTAAGGACACCATTGGAAGCCAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 90 bp ATTGCGGTGTTGACCGAGGAACAGTCATCATTGTCCAGCTTAGTTTaGTCAAAGTTCAGGTTAACGGAGGACATGGAGGGGCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: IAVLTEEQSSLSSLV*SKFRLTEDMEGLSK
Trigger: CTTTGAAAGCCCCTCCATGTCCTCCGTTAACCTGAACTTTGACCAAACTAAGCTGGACAATGATGACTGTTCCTCGGTCAACACCGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGTTGAGTTCAGTCCATaGCCGGTGCTGAGGGATCCC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEVEFSP*PVLRDP
Trigger: GGGATCCCTCAGCACCGGCAATGGACTGAACTCAAC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATTGTTGGGAACATCTTaGGATACGCAGGAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTLLGTS*DTQELL
Trigger: CAAAAGCTCCTGCGTATCCAAAGATGTTCCCAACAA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACTGCAGGTTCTGCATGTaGTTGAGATGTTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHCRFCM*LRCLSD
Trigger: GTCCGACAAACATCTCAACAACATGCAGAACCTGCA...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCACCCAGCATGTCCAGGTaGTCCGTCGTGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPPSMSR*SVVNLL
Trigger: CAACAAGTTCACGACGGACAACCTGGACATGCTGGG...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTCCACTCATTGGCCTaGCCACCCTCCTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELHSLA*PPSLMW
Trigger: CCACATCAAGGAGGGTGGCAAGGCCAATGAGTGGAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCGCCGTGCTCCATGCTaGCAGGTGGCAAGATGTTCT +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERRAPC*QVARCS
Trigger: AGAACATCTTGCCACCTGCAAGCATGGAGCACGGCG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCGGCACTGCTTGGATaGGTGGCGGTAAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAALLG*VAVKVL
Trigger: CAACACCTTTACCGCCACCAATCCAAGCAGTGCCGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTTTCTTTTCCGGGTGTaGGCTTGGCTGCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEFLFRV*AWLQEG
Trigger: GCCCTCCTGCAGCCAAGCCAACACCCGGAAAAGAAA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTGGTGATGGGAGGGTaGCTGAAGTTGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELVMGG*LKLYGE
Trigger: CTCCCCGTACAACTTCAGCAACCCTCCCATCACCAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGTTCTCGAGGACCGCTaGCTCCCCCAGTACTCCTGC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQVLEDR*LPQYSC
Trigger: GCAGGAGTACTGGGGGAGCAAGCGGTCCTCGAGAAC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGGGCTGTCTTGGCCTaGAAGAGAGCTCGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRAVLA*KRARQK
Trigger: CTTTTGCCGAGCTCTCTTCAAGGCCAAGACAGCCCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACAGAGGAACAGTCATCATaGTCCAGCTTAGTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTEEQSS*SSLVWS
Trigger: TGACCAAACTAAGCTGGACAATGATGACTGTTCCTC...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCCATCATGGCTGCTTaGGTCAACCCCTCGTTCGGT +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAIMAA*VNPSFG
Trigger: ACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACACCTGAACAACTCTCTTaGGCAATCCAATGTCATTGC +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTPEQLS*AIQCHC
Trigger: GCAATGACATTGGATTGCCAAAGAGAGTTGTTCAGG...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGAACATCCCTTGTTGTaGAGCTGCCAGTCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPEHPLL*SCQSED
Trigger: GTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGTTTGGGGGATTCTTaGGCAGGGTCTTTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGLGDS*AGSLSG
Trigger: CCCAGACAAAGACCCTGCCAAAGAATCCCCCAAACC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCGAATAGTCGTCTGTaGGCATCGAGGGCTGAACCC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPNSRL*ASRAEP
Trigger: GGGTTCAGCCCTCGATGCCAACAGACGACTATTCGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCGGTCCGTCGGACTTTaGGCTGAGATCCGTGTCAGA +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEERSVGL*AEIRVR
Trigger: TCTGACACGGATCTCAGCCAAAAGTCCGACGGACCG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGAGGCTGAGCACTCGTaGCAGCTGACCTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVREAEHS*QLTSLL
Trigger: CAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTGTTGCCAGTCCCGTaGCTGTTCCCACTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLLPVP*LFPLAA
Trigger: GGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACTGTTGCCAGTCCCGTaGCTGTTCCCACTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRLLPVP*LFPLAA
Trigger: GGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGAAGGGGAAGCGATGTaGGCACTGATGGGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQEGEAM*ALMGFP
Trigger: GGGGAACCCCATCAGTGCCAACATCGCTTCCCCTTC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTGCTGCTGCTGCTGTaGCCTGGACGCAATCATATC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELLLLL*PGRNHI
Trigger: GATATGATTGCGTCCAGGCAACAGCAGCAGCAGCAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCCTTGATGACCACTTaGTTTTTCTTTTCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSLMTT*FFFSGC
Trigger: ACACCCGGAAAAGAAAAACAAAGTGGTCATCAAGGA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCTGAGGAGGTAGGTTaGCCAGCTGTTGAGGGGTCG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRAEEVG*PAVEGS
Trigger: CGACCCCTCAACAGCTGGCAAACCTACCTCCTCAGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCCTCCAGCTTCCTCTaGAGCGTGTTCATCGTGGAG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESSSFL*SVFIVE
Trigger: CTCCACGATGAACACGCTCAAGAGGAAGCTGGAGGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCTGCAGATTGGTCATTaGAGTGCGAAAACGTTTCTG +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHLQIGH*SAKTFL
Trigger: CAGAAACGTTTTCGCACTCAAATGACCAATCTGCAG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGTTGTCGAACATCCCTaGTTGTTGAGCTGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPVVEHP*LLSCQS
Trigger: GGACTGGCAGCTCAACAACAAGGGATGTTCGACAAC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGTTGAGTTCAGTCCATaGCCGGTGCTGAGGGATCCC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQVEFSP*PVLRDP
Trigger: GGGATCCCTCAGCACCGGCAATGGACTGAACTCAAC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCTGCCCCAGAGTCCTaGCCCTCTGAGGATTTGGTA +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRAAPES*PSEDLV
Trigger: TACCAAATCCTCAGAGGGCAAGGACTCTGGGGCAGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCCTCCTCCAGGTCATTaGGAAAGAGTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEPPPGH*ERVLCS
Trigger: GCTGCAAAGGACTCTTTCCAAATGACCTGGAGGAGG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAAGAGCAAGGTCCTTTTaGCTGCTACCACCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRRARSF*LLPPAG
Trigger: CCCCGCAGGTGGTAGCAGCAAAAAGGACCTTGCTCT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAAGGACCGTGTCACATTaGGGGCACTCCACACCGCTA +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRRTVSH*GHSTPL
Trigger: TAGCGGTGTGGAGTGCCCCAAATGTGACACGGTCCT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACACCGCCACGTGGGTTaGGTTTTTGGTTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQHRHVG*VFGLVG
Trigger: CCCCACCAAACCAAAAACCAAACCCACGTGGCGGTG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTGAGCCTCCACTCATaGGCCTTGCCACCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLSLHS*ALPPSL
Trigger: CAAGGAGGGTGGCAAGGCCAATGAGTGGAGGCTCAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTCAGGTGCACAGGGTaGCCGATGGCCACACACTTG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQFRCTG*PMATHL
Trigger: CAAGTGTGTGGCCATCGGCAACCCTGTGCACCTGAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGTTGTTGAGCATGTCTaGGCACAGGGGACAGCGGAG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQVVEHV*AQGTAE
Trigger: CTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAAC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGTTGTTGAGCATGTCTaGGCACAGGGGACAGCGGAG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRVVEHV*AQGTAE
Trigger: CTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAAC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACACTTAAACGGCTTATaGTCCGGGCTGCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRHLNGL*SGLLVG
Trigger: GCCCACCAGCAGCCCGGACAATAAGCCGTTTAAGTG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTTCTTTTCCGGGTGTaGGCTTGGCTGCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQFLFRV*AWLQEG
Trigger: GCCCTCCTGCAGCCAAGCCAACACCCGGAAAAGAAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACTGGTGCGAGGCCTCTaGTTCTGTTGCTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRLVRGL*FCCWSK
Trigger: CTTGCTCCAGCAACAGAACAAGAGGCCTCGCACCAG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACATGGAGTCCTCGTTTaGGCTGTCATCCTGCCCCTC +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRHGVLV*AVILPL
Trigger: GAGGGGCAGGATGACAGCCAAAACGAGGACTCCATG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTTGCTTCTCTTGGGTTaGGTTTGGCTGTGCACTGGG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELLLLG*VWLCTG
Trigger: CCCAGTGCACAGCCAAACCAAACCCAAGAGAAGCAA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTGTCCTTGCTTCTCTaGGGTTTGGTTTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELSLLL*GLVWLC
Trigger: GCACAGCCAAACCAAACCCAAGAGAAGCAAGGACAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAATGTCTCCCTTCATTaGGAGTCCCCCATCACAGTC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPNVSLH*ESPITV
Trigger: GACTGTGATGGGGGACTCCAAATGAAGGGAGACATT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCATTGTCCAGCTTAGTTaGGTCAAAGTTCAGGTTAAC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALIVQLS*VKVQVN
Trigger: GTTAACCTGAACTTTGACCAAACTAAGCTGGACAAT...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAGGCAATCCAATGTCATaGCCTAGAACCTCACACTCC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPGNPMS*PRTSHS
Trigger: GGAGTGTGAGGTTCTAGGCAATGACATTGGATTGCC...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GCTGGGGCGGAGCAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCCCTCATAACTCGTTaGGTTTATCCCAAAATGCTT +
Preference number: 5 (lower is better)
Translates to: AGAEQQIAIYPLGMNKTTSLITR*VYPKML
Trigger: AAGCATTTTGGGATAAACCAAACGAGTTATGAGGGA...TGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTGCTCCGCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGAGGGAGTCCGCACTaGCACTTTTGCTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRGSPH*HFCFLL
Trigger: AAGCAGAAAGCAAAAGTGCAAGTGCGGACTCCCTCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACCGAATAGTCGTCTGTaGGCATCGAGGGCTGAACCC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQPNSRL*ASRAEP
Trigger: GGGTTCAGCCCTCGATGCCAACAGACGACTATTCGG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAAGGTTCTGCATGTTGTaGAGATGTTTGTCGGACTGC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPRFCML*RCLSDC
Trigger: GCAGTCCGACAAACATCTCAACAACATGCAGAACCT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATTCAGCGATGGGTCGTaGGTCTGGATGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRFSDGS*VWMKLS
Trigger: CGAGAGCTTCATCCAGACCAACGACCCATCGCTGAA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGTTGCAGACGGCACATaGGAAGAGCTTCAGCGATGG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRVADGT*EELQRW
Trigger: CCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAAC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGAGCTGGAGGTGGATCTaGTTGTTGAGCATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESWRWI*LLSMSW
Trigger: CCAAGACATGCTCAACAACAAGATCCACCTCCAGCT...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CCACGCCTGATAAACTCAGGTTTCAACGCGTGCCGTCTGTTTTACTTTGCTCTCTCCTTATCCTTTTCCTaGATGACCACTTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PRLINSGFNACRLFYFALSLSFS*MTTLFF
Trigger: GAAAAACAAAGTGGTCATCAAGGAAAAGGATAAGGA...GAGAGCAAAGTAAAACAGACGGCACGCGTTGAAACCTGAGTTTATCAGGCGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAATGTTGGAGAAGAGCTaGCCGCAGGAGTCACACTCC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQMLEKS*PQESHS
Trigger: GGAGTGTGACTCCTGCGGCAAGCTCTTCTCCAACAT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATTCAGAATCAAGATGTaGGAGAAGAGCTTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPFRIKM*EKSLPQ
Trigger: CTGCGGCAAGCTCTTCTCCAACATCTTGATTCTGAA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCAATAGTGCTCTCTGTATaGCTTGGCAAACCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPIVLSV*LGKPLQ
Trigger: CTGGAGAGGTTTGCCAAGCAATACAGAGAGCACTAT...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGAGTCTGCAGTGGCATaGTCTGCATCATCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRESAVA*SASSVA
Trigger: CGCCACTGATGATGCAGACAATGCCACTGCAGACTC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCCTCACTGGGGGAGTaGTTAATGTCGAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESSLGE*LMSKYC
Trigger: GCAGTACTTCGACATTAACAACTCCCCCAGTGAGGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGGAGGGTTGCTGAAGTaGTACGGGGAGTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQGGLLK*YGESLF
Trigger: GAACAAGGACTCCCCGTACAACTTCAGCAACCCTCC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CACGGGCTTGCTTCTTTGCTCTCTGTACATTGCTATCTGTTTTGTTGGCTGCACCAAATTCATCATCCTTaGGGTAAGCATTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: HGLASLLSVHCYLFCWLHQIHHP*GKHWHQ
Trigger: TTGATGCCAATGCTTACCCAAAGGATGATGAATTTG...GTGCAGCCAACAAAACAGATAGCAATGTACAGAGAGCAAAGAAGCAAGCCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCTGTGATTGCGGTGTaGACCGAGGAACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESVIAV*TEEQSS
Trigger: TGATGACTGTTCCTCGGTCAACACCGCAATCACAGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTTCATACTCGGACATaGCCATCATGGCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELHTRT*PSWLLW
Trigger: CCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAAGCCTCGCGCTGTACTaGATGCCACACAAAGTGCAC +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSLALY*MPHKVH
Trigger: GTGCACTTTGTGTGGCATCAAGTACAGCGCGAGGCT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGCCTCGCGCTGTACTaGATGCCACACAAAGTGCAC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSLALY*MPHKVH
Trigger: GTGCACTTTGTGTGGCATCAAGTACAGCGCGAGGCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGTCGAACATCCCTTGTaGTTGAGCTGCCAGTCCGAG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQVEHPL*LSCQSE
Trigger: CTCGGACTGGCAGCTCAACAACAAGGGATGTTCGAC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGCGGAGATGTTCTTATaGCTAAGAAGTTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEAEMFL*LRSFRS
Trigger: GGAGCGGAAACTTCTTAGCAATAAGAACATCTCCGC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAACTGTCCATCTTCAGGTaGGGCAGGTTCATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLSIFR*GRFMFW
Trigger: CCAGAACATGAACCTGCCCAACCTGAAGATGGACAG...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCCGTCGTGAACTTGTaGCAGACGGCACATTGGAAG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSVVNL*QTAHWK
Trigger: CTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATCTCCTCTGATGCTTTaGGCCTCTTCGAAGAGAGCG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRSPLML*ASSKRA
Trigger: CGCTCTCTTCGAAGAGGCCAAAAGCATCAGAGGAGA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCCTCTGCTTTCGAGTaGAAGGTGGCCAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRASAFE*KVASSS
Trigger: TGATGAACTGGCCACCTTCAACTCGAAAGCAGAGGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAGCTGCATCTCTGGCTTaGGCTGTCCTTGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQAASLA*AVLASL
Trigger: AAGAGAAGCAAGGACAGCCAAAGCCAGAGATGCAGC...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTCTGCTCTTCTGGTTaGGGGGATTCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQFCSSG*GDSLAG
Trigger: CCCTGCCAAAGAATCCCCCAAACCAGAAGAGCAGAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCTATGTGGAAAGTGTaGATGATCTGCGGGTACACG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRAMWKV*MICGYT
Trigger: CGTGTACCCGCAGATCATCAACACTTTCCACATAGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTTGGAAAGAGTCCTTaGCAGCCCTCCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQFGKSP*QPSSSS
Trigger: AGAGGAAGAGGAGGGCTGCAAAGGACTCTTTCCAAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGGTGGATCTTGTTGTaGAGCATGTCTTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRWILL*SMSWHR
Trigger: CCTGTGCCAAGACATGCTCAACAACAAGATCCACCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGGAGGTGGATCTTGTaGTTGAGCATGTCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRWRWIL*LSMSWH
Trigger: GTGCCAAGACATGCTCAACAACAAGATCCACCTCCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATCCTTGATGACCACTTaGTTTTTCTTTTCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPSLMTT*FFFSGC
Trigger: ACACCCGGAAAAGAAAAACAAAGTGGTCATCAAGGA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATGCTCTCTGTATTGCTaGGCAAACCTCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRCSLYC*ANLSSC
Trigger: ACAGCTGGAGAGGTTTGCCAAGCAATACAGAGAGCA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGGAGGAACAGTCATCATaGTCCAGCTTAGTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEEEEQSS*SSLVWS
Trigger: TGACCAAACTAAGCTGGACAATGATGACTGTTCCTC...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATCTGTGATTGCGGTGTaGACCGAGGAACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSVIAV*TEEQSS
Trigger: TGATGACTGTTCCTCGGTCAACACCGCAATCACAGA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGCTGCAGATTGGTCATTaGAGTGCGAAAACGTTTCTG +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEELQIGH*SAKTFL
Trigger: CAGAAACGTTTTCGCACTCAAATGACCAATCTGCAG...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp TCTAAGCAATTGAGCACGGTAGTAAACATATGCCTTGGAAATGGCTACAGACCATTTATCCCAAAATGCTaGGCCATGCTTAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: SKQLSTVVNICLGNGYRPFIPKC*AMLNLD
Trigger: GTCCAAGTTAAGCATGGCCAAGCATTTTGGGATAAA...TGGTCTGTAGCCATTTCCAAGGCATATGTTTACTACCGTGCTCAATTGCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAATGAAGCACCATCTCTaGCAGGTTCACCACAGACTG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRMKHHL*QVHHRL
Trigger: CAGTCTGTGGTGAACCTGCAAGAGATGGTGCTTCAT...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGTGATTGTTCTGTGTTaGTGCAAGGCCGACTCGAGA +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRVIVLC*CKADSR
Trigger: TCTCGAGTCGGCCTTGCACAAACACAGAACAATCAC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGAGCGGAGATGTTCTTATaGCTAAGAAGTTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRAEMFL*LRSFRS
Trigger: GGAGCGGAAACTTCTTAGCAATAAGAACATCTCCGC...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGGGGTTCCTTGTCTTaGCCAATCCCTTGGATGATA +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQRGSLS*PIPWMI
Trigger: TATCATCCAAGGGATTGGCAAAGACAAGGAACCCCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGACTGGGTCATGTTCTGTaGAAGCAGCATCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRLGHVL*KQHHVV
Trigger: CACAACATGATGCTGCTTCAACAGAACATGACCCAG...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAAGCTTCTTCTGGTGTTaGATGAGGTCAAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQSFFWC*MRSKMR
Trigger: GCGCATCTTTGACCTCATCAAACACCAGAAGAAGCT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAATTGGCCATGCTTAACTaGGACTTCTTCTCTTTCGCC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQLAMLN*DFFSFA
Trigger: GGCGAAAGAGAAGAAGTCCAAGTTAAGCATGGCCAA...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp AGAATTAAATGTCTTTCGAAAGTCTCAACTCCCCAACAGAAATACTCTGTGAGATACATCTGCTCGGGTTaGATCTCCTCTGATGCTTTT +
Preference number: 5 (lower is better)
Translates to: RIKCLSKVSTPQQKYSVRYICSG*ISSDAF
Trigger: AAAAGCATCAGAGGAGATCAAACCCGAGCAGATGTA...TCTCACAGAGTATTTCTGTTGGGGAGTTGAGACTTTCGAAAGACATTTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp CAACAGATTGCAATCTATCCACTAGGGATGAACAAGACAACATCAAATGAGGAGTCCCTCATAACTCGTTaGGTTTATCCCAAAATGCTT +
Preference number: 5 (lower is better)
Translates to: QQIAIYPLGMNKTTSNEESLITR*VYPKML
Trigger: AAGCATTTTGGGATAAACCAAACGAGTTATGAGGGA...CTCCTCATTTGATGTTGTCTTGTTCATCCCTAGTGGATAGATTGCAATCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS-3UTR CAA 90 bp GTGCCAATAGAAGAACTAACTTTCAAAGTTGAGTTGAGATGGTCTACAACTCAAATTGTCCAGCTTAGTTaGGTCAAAGTTCAGGTTAAC +
Preference number: 5 (lower is better)
Translates to: VPIEELTFKVELRWSTTQIVQLS*VKVQVN
Trigger: GTTAACCTGAACTTTGACCAAACTAAGCTGGACAAT...TTGAGTTGTAGACCATCTCAACTCAACTTTGAAAGTTAGTTCTTCTATTGGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GGGTGGAGCCGACGCGGGGATGGCTGGCGCGGAAGCTaGCTGGGGAGGTGCGGTAGGAAGCGGAGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: GWSRRGDGWRGS*LGRCGRKRRRG
Trigger: CCCCCGCCTCCGCTTCCTACCGCACCTCCCCAGCCAGCTTCCGCGCCAGCCATCCCCGCGTCGGCTCCACCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CGGGAGCCCACTGGCGGCCAAGACTTCCTGGAGGCGTaGGGGGAAGCGGACGAGGACGGGGCGGCCGACGGG +
Preference number: 6 (lower is better)
Translates to: REPTGGQDFLEA*GEADEDGAADG
Trigger: CCCGTCGGCCGCCCCGTCCTCGTCCGCTTCCCCCCACGCCTCCAGGAAGTCTTGGCCGCCAGTGGGCTCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CGGGGTCAGCTGTGGTGCAGGGATCTGTTGGGCTGCTaGCGGCGGCGGAGGCTGCTGCACCGGTGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: RGQLWCRDLLGC*RRRRLLHRWLR
Trigger: CCGCAGCCACCGGTGCAGCAGCCTCCGCCGCCGCCAGCAGCCCAACAGATCCCTGCACCACAGCTGACCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGGAGGCTGGAAAAGGAGGCTGAGCACTCGTTGCAGCTGACCTCCTaGCTGGCGGGCTCGGCGGGCGGCCCAGCGGAGGTGCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: WRLEKEAEHSLQLTS*LAGSAGGPAEVLLS
Trigger: GGACAGCAGCACCTCCGCTGGGCCGCCCGCCGAGCCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTCCTTTTCCAGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GGAGGCTGGAAAAGGAGGCTGAGCACTCGTTGCAGCTaGCCTCCTTGCTGGCGGGCTCGGCGGGCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GGWKRRLSTRCS*PPCWRARRAAQ
Trigger: CTGGGCCGCCCGCCGAGCCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTCCTTTTCCAGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp ACTGGTAGAGCTCAGCCTCAGCGGGCGAGGGGAGGCTaGCGAGCCCCAGGTGGCGGTTGTGCTGGATCTGGG +
Preference number: 6 (lower is better)
Translates to: TGRAQPQRARGG*RAPGGGCAGSG
Trigger: CCCAGATCCAGCACAACCGCCACCTGGGGCTCGGCAGCCTCCCCTCGCCCGCTGAGGCTGAGCTCTACCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp ACCACAGACTGGCCGAAGCAGCAGAGGGACTTCAGGTaGCTCCTCGCCGCCTCCTCGTCGCCGAAGCCCGCC +
Preference number: 6 (lower is better)
Translates to: TTDWPKQQRDFR*LLAASSSPKPA
Trigger: GGCGGGCTTCGGCGACGAGGAGGCGGCGAGGAGCCACCTGAAGTCCCTCTGCTGCTTCGGCCAGTCTGTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GAAAAGGAGGCTGAGCACTCGTTGCAGCTGACCTCCTaGCTGGCGGGCTCGGCGGGCGGCCCAGCGGAGGTG +
Preference number: 6 (lower is better)
Translates to: EKEAEHSLQLTS*LAGSAGGPAEV
Trigger: CACCTCCGCTGGGCCGCCCGCCGAGCCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTCCTTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CTGGTCAGACCACTGTCCTTGGGGCAGCTGGGGTCTTaGGGACCCTCCACCGGGCTCGCCGGTCCGTCGGAC +
Preference number: 6 (lower is better)
Translates to: LVRPLSLGQLGS*GPSTGLAGPSD
Trigger: GTCCGACGGACCGGCGAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AGGTCCTCGTCCTCCTCCGGGAGGCCCTTCTGCAGCCGCTGCAGCTaGCGCAGGCTCTCACTGCGCTGGTGCTTCATGGAGCGCACGTGC +
Preference number: 6 (lower is better)
Translates to: RSSSSSGRPFCSRCS*RRLSLRWCFMERTC
Trigger: GCACGTGCGCTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGCAGAAGGGCCTCCCGGAGGAGGACGAGGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGCGGAGGAGGCTGCGGTAAGGAAGGGGCAGCCGGCTGCGGGAGCTaGGGCTGGGGTGCGTTTGTCTTCTGCTCCAGCTGCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: CGGGCGKEGAAGCGS*GWGAFVFCSSCSSC
Trigger: GCAGCTGGAGCAGCTGGAGCAGAAGACAAACGCACCCCAGCCCAAGCTCCCGCAGCCGGCTGCCCCTTCCTTACCGCAGCCTCCTCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CTCTCGCCCAGGTTCATCAGCTCCTCCGACACCAGCTaGCCGCCCCCGAGGCGCATGTCGAGGGGGATCTCA +
Preference number: 6 (lower is better)
Translates to: LSPRFISSSDTS*PPPRRMSRGIS
Trigger: TGAGATCCCCCTCGACATGCGCCTCGGGGGCGGGCAGCTGGTGTCGGAGGAGCTGATGAACCTGGGCGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TGCGCCTGGGCCTGGGCGAGTGTCTGGGCTTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTG +
Preference number: 6 (lower is better)
Translates to: CAWAWASVWACC*CCCCCCCCCCL
Trigger: CAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp AGGTTCAAGAGGGTGCTGGGGGTCAAGAGACCAGCCTaGGGCTGCTCAGGGCCAGCAGCGGCTACGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RFKRVLGVKRPA*GCSGPAAATAG
Trigger: CCCAGCCGTAGCCGCTGCTGGCCCTGAGCAGCCCCAGGCTGGTCTCTTGACCCCCAGCACCCTCTTGAACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TGTGCCTGGACTTGCGCCTGGGCCTGGGCGAGTGTCTaGGCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CAWTCAWAWASV*ACCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TGGTCAGACCACTGTCCTTGGGGCAGCTGGGGTCTTTaGGACCCTCCACCGGGCTCGCCGGTCCGTCGGACT +
Preference number: 6 (lower is better)
Translates to: WSDHCPWGSWGL*DPPPGSPVRRT
Trigger: AGTCCGACGGACCGGCGAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GGGGTAGAGGAGCTGAGGGACACCCCGCCGCTGTTGCCAGTCCCGTaGCTGTTCCCACTTGCAGCCTCCAGCTTGGCTGCCCGTGCCTTG +
Preference number: 6 (lower is better)
Translates to: GVEELRDTPPLLPVP*LFPLAASSLAARAL
Trigger: CAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAGCGGCGGGGTGTCCCTCAGCTCCTCTACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp CAGGTGTGCCTGGACTTGCGCCTGGGCCTGGGCGAGTGTCTGGGCTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: QVCLDLRLGLGECLG*LLLLLLLLLLLLPG
Trigger: TCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCAGACACTCGCCCAGGCCCAGGCGCAAGTCCAGGCACACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp AGGGTCCACTGCGTACTCCATGGCGGGCAGTGGGGCTaGGATGGTTGCTGTAGCCGCTGGAGGGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: RVHCVLHGGQWG*DGCCSRWRGLS
Trigger: GGAGAGGCCCCTCCAGCGGCTACAGCAACCATCTCAGCCCCACTGCCCGCCATGGAGTACGCAGTGGACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CCAGCGAGCGTGAGGAGCCCAGGACCGTGTCACATTTaGGGCACTCCACACCGCTACCTGAGGGGCACTCCC +
Preference number: 6 (lower is better)
Translates to: PASVRSPGPCHI*GTPHRYLRGTP
Trigger: GGGAGTGCCCCTCAGGTAGCGGTGTGGAGTGCCCCAAATGTGACACGGTCCTGGGCTCCTCACGCTCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GGTAAGGAAGGGGCAGCCGGCTGCGGGAGCTTGGGCTaGGGTGCGTTTGTCTTCTGCTCCAGCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GKEGAAGCGSLG*GAFVFCSSCSS
Trigger: GCTGGAGCAGCTGGAGCAGAAGACAAACGCACCCCAGCCCAAGCTCCCGCAGCCGGCTGCCCCTTCCTTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCTGCGGTAAGGAAGGGGCAGCCGGCTGCGGGAGCTTaGGCTGGGGTGCGTTTGTCTTCTGCTCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: AAVRKGQPAAGA*AGVRLSSAPAA
Trigger: AGCAGCTGGAGCAGAAGACAAACGCACCCCAGCCCAAGCTCCCGCAGCCGGCTGCCCCTTCCTTACCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CCCAGCGAGCGTGAGGAGCCCAGGACCGTGTCACATTaGGGGCACTCCACACCGCTACCTGAGGGGCACTCC +
Preference number: 6 (lower is better)
Translates to: PSEREEPRTVSH*GHSTPLPEGHS
Trigger: GGAGTGCCCCTCAGGTAGCGGTGTGGAGTGCCCCAAATGTGACACGGTCCTGGGCTCCTCACGCTCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TCCTCCTCCGGGAGGCCCTTCTGCAGCCGCTGCAGCTaGCGCAGGCTCTCACTGCGCTGGTGCTTCATGGAG +
Preference number: 6 (lower is better)
Translates to: SSSGRPFCSRCS*RRLSLRWCFME
Trigger: CTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGCAGAAGGGCCTCCCGGAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CCCCGCCGCTGTTGCCAGTCCCGTTGCTGTTCCCACTaGCAGCCTCCAGCTTGGCTGCCCGTGCCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: PRRCCQSRCCSH*QPPAWLPVPWS
Trigger: AGACCAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAGCGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GAGCTGAGGGACACCCCGCCGCTGTTGCCAGTCCCGTaGCTGTTCCCACTTGCAGCCTCCAGCTTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ELRDTPPLLPVP*LFPLAASSLAA
Trigger: GGCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAGCGGCGGGGTGTCCCTCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GGAGCCATGGCGGCACTGCTTGGATTGGTGGCGGTAAAGGTGTTGTaGGCGCCGCTGCTGCCCACGGGACTGGGGGTAGAGGAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: GAMAALLGLVAVKVL*APLLPTGLGVEELR
Trigger: CCTCAGCTCCTCTACCCCCAGTCCCGTGGGCAGCAGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CCCCCATCACGGCCTTCCACTCGTCCTCCGAGAGGCTaGGCTCCACGTTCATGTGCAGCCCCAGCATGTCCA +
Preference number: 6 (lower is better)
Translates to: PPSRPSTRPPRG*APRSCAAPACP
Trigger: TGGACATGCTGGGGCTGCACATGAACGTGGAGCGCAGCCTCTCGGAGGACGAGTGGAAGGCCGTGATGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TGGCGGTCTGACACGGGCAGCTGGGGCCTCTTGGCGTaGACCTCGTTGAAATGGGTCTGCAGTGTGGCGGAG +
Preference number: 6 (lower is better)
Translates to: WRSDTGSWGLLA*TSLKWVCSVAE
Trigger: CTCCGCCACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp GGCAGAGCTCGCTTTGGCTCGGAGCCTGAATCCTCCTaGACTGACCCAGAGTCGCTGCCTGTCGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: GRARFGSEPESS*TDPESLPVGLC
Trigger: GCAGAGCCCGACAGGCAGCGACTCTGGGTCAGTGCAGGAGGATTCAGGCTCCGAGCCAAAGCGAGCTCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TTTGTCCTTACGTTGCTGCTGCGGGGTCAGCTGTGGTaGAGGGATCTGTTGGGCTGCTGGCGGCGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: FVLTLLLRGQLW*RDLLGCWRRRR
Trigger: CCTCCGCCGCCGCCAGCAGCCCAACAGATCCCTGCACCACAGCTGACCCCGCAGCAGCAACGTAAGGACAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCCAGGCTGCACTGGTTGCAGCGGTACTTATACACGTaGCGGTCTGACACGGGCAGCTGGGGCCTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: ARLHWLQRYLYT*RSDTGSWGLLA
Trigger: CGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCACGTGTATAAGTACCGCTGCAACCAGTGCAGCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCTCTCGGGTGGCACCTGGCTCAGCGCATTGACGCTTaGAGCCATGGCGGCACTGCTTGGATTGGTGGCGGT +
Preference number: 6 (lower is better)
Translates to: ALGWHLAQRIDA*SHGGTAWIGGG
Trigger: ACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGGTGCCACCCGAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp ATTGGCATGGAGAGCTGGGTGAGAGGCACGGAGGGTTaGGCGGGGGCGATGGTGGGCGAAGTGATGGGTGGA +
Preference number: 6 (lower is better)
Translates to: IGMESWVRGTEG*AGAMVGEVMGG
Trigger: TCCACCCATCACTTCGCCCACCATCGCCCCCGCCCAACCCTCCGTGCCTCTCACCCAGCTCTCCATGCCAAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCGTGTTCATCGTGGAGGTGGGCGTCGAAGGGGAAGTaGCTGAGCTCGCTGGGATCTGAGGGATGGCACCCG +
Preference number: 6 (lower is better)
Translates to: ACSSWRWASKGK*LSSLGSEGWHP
Trigger: CGGGTGCCATCCCTCAGATCCCAGCGAGCTCAGCCACTTCCCCTTCGACGCCCACCTCCACGATGAACACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TTCCTACACTGGTCAGACCACTGTCCTTGGGGCAGCTaGGGTCTTTGGGACCCTCCACCGGGCTCGCCGGTC +
Preference number: 6 (lower is better)
Translates to: FLHWSDHCPWGS*GLWDPPPGSPV
Trigger: GACCGGCGAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGACCAGTGTAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GCGGCACTGCTTGGATTGGTGGCGGTAAAGGTGTTGTaGGCGCCGCTGCTGCCCACGGGACTGGGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: AALLGLVAVKVL*APLLPTGLGVE
Trigger: CTCTACCCCCAGTCCCGTGGGCAGCAGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AGGGGCCCATGGCTCTCGCCTGTGGGCTGCTCCATGCTACTGGGTTaGTCGGGGAGGTGGGCGCTGTTGAGTTCAGTCCATTGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: RGPWLSPVGCSMLLG*SGRWALLSSVHCRC
Trigger: GCACCGGCAATGGACTGAACTCAACAGCGCCCACCTCCCCGACAAACCCAGTAGCATGGAGCAGCCCACAGGCGAGAGCCATGGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp CCGCTGTTGCCAGTCCCGTTGCTGTTCCCACTTGCAGCCTCCAGCTaGGCTGCCCGTGCCTTGGTCTGGTGCAGCACAGACCGCATGTGG +
Preference number: 6 (lower is better)
Translates to: PLLPVPLLFPLAASS*AARALVWCSTDRMW
Trigger: CCACATGCGGTCTGTGCTGCACCAGACCAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACGGGACTGGCAACAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp CTTGGAGCCATGGCGGCACTGCTTGGATTGGTGGCGGTAAAGGTGTaGTTGGCGCCGCTGCTGCCCACGGGACTGGGGGTAGAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LGAMAALLGLVAVKV*LAPLLPTGLGVEEL
Trigger: CAGCTCCTCTACCCCCAGTCCCGTGGGCAGCAGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AGAGGCGGCATCACCACGCTCTCGGGTGGCACCTGGCTCAGCGCATaGACGCTTGGAGCCATGGCGGCACTGCTTGGATTGGTGGCGGTA +
Preference number: 6 (lower is better)
Translates to: RGGITTLSGGTWLSA*TLGAMAALLGLVAV
Trigger: TACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGGTGCCACCCGAGAGCGTGGTGATGCCGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AGGCCTCTTGTTCTGTTGCTGGAGCAAGGTGGGGTTGAGCTGGTGTaGGTAGAGCTGGGCCAGATCGGCAGGCAGCGGCTCCACGGGGCC +
Preference number: 6 (lower is better)
Translates to: RPLVLLLEQGGVELV*VELGQIGRQRLHGA
Trigger: GGCCCCGTGGAGCCGCTGCCTGCCGATCTGGCCCAGCTCTACCAACACCAGCTCAACCCCACCTTGCTCCAGCAACAGAACAAGAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp CTGCTGGTGGGCTCCGGCTGGCCGGTTGCCGATTCCTaGAGGGCCCTCTTTAACTTGTGCAGGTGCGAGACG +
Preference number: 6 (lower is better)
Translates to: LLVGSGWPVADS*RALFNLCRCET
Trigger: CGTCTCGCACCTGCACAAGTTAAAGAGGGCCCTTCAGGAATCGGCAACCGGCCAGCCGGAGCCCACCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp TCACCACGCTCTCGGGTGGCACCTGGCTCAGCGCATTaGCGCTTGGAGCCATGGCGGCACTGCTTGGATTGG +
Preference number: 6 (lower is better)
Translates to: SPRSRVAPGSAH*RLEPWRHCLDW
Trigger: CCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGGTGCCACCCGAGAGCGTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GTTCATCGTGGAGGTGGGCGTCGAAGGGGAAGTGGCTaGGCTCGCTGGGATCTGAGGGATGGCACCCGAGAG +
Preference number: 6 (lower is better)
Translates to: VHRGGGRRRGSG*ARWDLRDGTRE
Trigger: CTCTCGGGTGCCATCCCTCAGATCCCAGCGAGCTCAGCCACTTCCCCTTCGACGCCCACCTCCACGATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp AGCCGCTGCAGCTTGCGCAGGCTCTCACTGCGCTGGTaGTTCATGGAGCGCACGTGCTGGATGAGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SRCSLRRLSLRW*FMERTCWMRLS
Trigger: GCTCAACCTCATCCAGCACGTGCGCTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TGCAGCCGCTGCAGCTTGCGCAGGCTCTCACTGCGCTaGTGCTTCATGGAGCGCACGTGCTGGATGAGGTTG +
Preference number: 6 (lower is better)
Translates to: CSRCSLRRLSLR*CFMERTCWMRL
Trigger: CAACCTCATCCAGCACGTGCGCTCCATGAAGCACCAGCGCAGTGAGAGCCTGCGCAAGCTGCAGCGGCTGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCCCGTGCCTTGGTCTGGTGCAGCACAGACCGCATGTaGATCTCCAGCGTGGAACTCTGGCTGTACGCCACG +
Preference number: 6 (lower is better)
Translates to: ARALVWCSTDRM*ISSVELWLYAT
Trigger: CGTGGCGTACAGCCAGAGTTCCACGCTGGAGATCCACATGCGGTCTGTGCTGCACCAGACCAAGGCACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp ATCTTTGTCCTTACGTTGCTGCTGCGGGGTCAGCTGTaGTGCAGGGATCTGTTGGGCTGCTGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: IFVLTLLLRGQL*CRDLLGCWRRR
Trigger: CCGCCGCCGCCAGCAGCCCAACAGATCCCTGCACCACAGCTGACCCCGCAGCAGCAACGTAAGGACAAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp AGGTGTCCGTTCCTACACTGGTCAGACCACTGTCCTTaGGGCAGCTGGGGTCTTTGGGACCCTCCACCGGGC +
Preference number: 6 (lower is better)
Translates to: RCPFLHWSDHCP*GSWGLWDPPPG
Trigger: GCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGACCAGTGTAGGAACGGACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CCAGTCCCGTTGCTGTTCCCACTTGCAGCCTCCAGCTaGGCTGCCCGTGCCTTGGTCTGGTGCAGCACAGAC +
Preference number: 6 (lower is better)
Translates to: PVPLLFPLAASS*AARALVWCSTD
Trigger: GTCTGTGCTGCACCAGACCAAGGCACGGGCAGCCAAGCTGGAGGCTGCAAGTGGGAACAGCAACGGGACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp ATGGCGGCACTGCTTGGATTGGTGGCGGTAAAGGTGTaGTTGGCGCCGCTGCTGCCCACGGGACTGGGGGTA +
Preference number: 6 (lower is better)
Translates to: MAALLGLVAVKV*LAPLLPTGLGV
Trigger: TACCCCCAGTCCCGTGGGCAGCAGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GGGACCCTCCACCGGGCTCGCCGGTCCGTCGGACTTTaGGCTGAGATCCGTGTCAGACTCCTCCGAATAGTC +
Preference number: 6 (lower is better)
Translates to: GTLHRARRSVGL*AEIRVRLLRIV
Trigger: GACTATTCGGAGGAGTCTGACACGGATCTCAGCCAAAAGTCCGACGGACCGGCGAGCCCGGTGGAGGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGGCTCAGCGCATTGACGCTTGGAGCCATGGCGGCACTGCTTGGATaGGTGGCGGTAAAGGTGTTGTTGGCGCCGCTGCTGCCCACGGGA +
Preference number: 6 (lower is better)
Translates to: WLSALTLGAMAALLG*VAVKVLLAPLLPTG
Trigger: TCCCGTGGGCAGCAGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AGGTGGCTCCTCGCCGCCTCCTCGTCGCCGAAGCCCGCCTGGCACTaGCGGCAGACCAACTTGTACTGCACCTTTGGAACAATGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RWLLAASSSPKPAWH*RQTNLYCTFGTMKG
Trigger: CCCCTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCTTCGGCGACGAGGAGGCGGCGAGGAGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp ACCGCCGCTGCCACCGCTGCCGGTGGGGACATGAAGCACCATCTCTaGCAGGTTCACCACAGACTGGCCGAAGCAGCAGAGGGACTTCAG +
Preference number: 6 (lower is better)
Translates to: TAAATAAGGDMKHHL*QVHHRLAEAAEGLQ
Trigger: CTGAAGTCCCTCTGCTGCTTCGGCCAGTCTGTGGTGAACCTGCAAGAGATGGTGCTTCATGTCCCCACCGGCAGCGGTGGCAGCGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GCTACTGGGTTTGTCGGGGAGGTGGGCGCTGTTGAGTTCAGTCCATaGCCGGTGCTGAGGGATCCCGCACCCATTGTCCTTCCCCGAGAC +
Preference number: 6 (lower is better)
Translates to: ATGFVGEVGAVEFSP*PVLRDPAPIVLPRD
Trigger: GTCTCGGGGAAGGACAATGGGTGCGGGATCCCTCAGCACCGGCAATGGACTGAACTCAACAGCGCCCACCTCCCCGACAAACCCAGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AAGCCTGAGTCTTCTCTCCCGCAGCTGGGGTCAGCAGAGGTCGGCTaGAGGTCCCCGCCGTGCTCCATGCTTGCAGGTGGCAAGATGTTC +
Preference number: 6 (lower is better)
Translates to: KPESSLPQLGSAEVG*RSPPCSMLAGGKMF
Trigger: GAACATCTTGCCACCTGCAAGCATGGAGCACGGCGGGGACCTCAAGCCGACCTCTGCTGACCCCAGCTGCGGGAGAGAAGACTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GGGGTCTTTGGGACCCTCCACCGGGCTCGCCGGTCCGTCGGACTTTaGGCTGAGATCCGTGTCAGACTCCTCCGAATAGTCGTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: GVFGTLHRARRSVGL*AEIRVRLLRIVVCW
Trigger: CCAACAGACGACTATTCGGAGGAGTCTGACACGGATCTCAGCCAAAAGTCCGACGGACCGGCGAGCCCGGTGGAGGGTCCCAAAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp AGGTGGGCGCTGTTGAGTTCAGTCCATTGCCGGTGCTaGGGGATCCCGCACCCATTGTCCTTCCCCGAGACG +
Preference number: 6 (lower is better)
Translates to: RWALLSSVHCRC*GIPHPLSFPET
Trigger: CGTCTCGGGGAAGGACAATGGGTGCGGGATCCCTCAGCACCGGCAATGGACTGAACTCAACAGCGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp CCATGCTACTGGGTTTGTCGGGGAGGTGGGCGCTGTTaGGTTCAGTCCATTGCCGGTGCTGAGGGATCCCGC +
Preference number: 6 (lower is better)
Translates to: PCYWVCRGGGRC*VQSIAGAEGSR
Trigger: GCGGGATCCCTCAGCACCGGCAATGGACTGAACTCAACAGCGCCCACCTCCCCGACAAACCCAGTAGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp ATGGGGAAGTGTGGGAGGAGCGTGGGGTTGAACAGCTaGGACTGGATCAGGGCGGCCTGTTGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: MGKCGRSVGLNS*DWIRAACCCSS
Trigger: GGAGCTGCAGCAACAGGCCGCCCTGATCCAGTCTCAGCTGTTCAACCCCACGCTCCTCCCACACTTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp CCTCCACCGGGCTCGCCGGTCCGTCGGACTTTTGGCTaGGATCCGTGTCAGACTCCTCCGAATAGTCGTCTG +
Preference number: 6 (lower is better)
Translates to: PPPGSPVRRTFG*DPCQTPPNSRL
Trigger: CAGACGACTATTCGGAGGAGTCTGACACGGATCTCAGCCAAAAGTCCGACGGACCGGCGAGCCCGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp ACTCCTTCTCTGCCTGACTGGATGACGCTGCCCTCTTaGTCTGCCCTTCCTCGCTGCCGCTCCCCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: TPSLPDWMTLPS*SALPRCRSPGL
Trigger: AAGACCAGGGGAGCGGCAGCGAGGAAGGGCAGAGCAAGAGGGCAGCGTCATCCAGTCAGGCAGAGAAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CGGAGCAAAGGCTGCACCGAGTGCTGTGTCATGGCGTaGACCCGCAGCCGGTTCACGTCAGCGTTGCTATAC +
Preference number: 6 (lower is better)
Translates to: RSKGCTECCVMA*TRSRFTSALLY
Trigger: GTATAGCAACGCTGACGTGAACCGGCTGCGGGTGCACGCCATGACACAGCACTCGGTGCAGCCTTTGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CTGGGGTCAGCAGAGGTCGGCTTGAGGTCCCCGCCGTaGTCCATGCTTGCAGGTGGCAAGATGTTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: LGSAEVGLRSPP*SMLAGGKMFFP
Trigger: GGGAAAGAACATCTTGCCACCTGCAAGCATGGAGCACGGCGGGGACCTCAAGCCGACCTCTGCTGACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TTGAAGGTGGCCAGTTCATCAGTCTCCGCTGTGAGCTaGAAGAACGCGGAGGGCGCGGTATTGGCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: LKVASSSVSAVS*KNAEGAVLAAA
Trigger: GGCAGCGGCCAATACCGCGCCCTCCGCGTTCTTGCAGCTCACAGCGGAGACTGATGAACTGGCCACCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TCGCCGCCTCCTCGTCGCCGAAGCCCGCCTGGCACTTaGGGCAGACCAACTTGTACTGCACCTTTGGAACAA +
Preference number: 6 (lower is better)
Translates to: SPPPRRRSPPGT*GRPTCTAPLEQ
Trigger: TTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCTTCGGCGACGAGGAGGCGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CAGGGCTGTAGGGAAACAGGCCTTCCATGCCATACATaGGCTGCAGGTACCCACTCTGCAGGGCGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: QGCRETGLPCHT*AAGTHSAGRQG
Trigger: TCCCTGGCGCCCTGCAGAGTGGGTACCTGCAGCCCATGTATGGCATGGAAGGCCTGTTTCCCTACAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TACACGTGGCGGTCTGACACGGGCAGCTGGGGCCTCTaGGCGTGCACCTCGTTGAAATGGGTCTGCAGTGTG +
Preference number: 6 (lower is better)
Translates to: YTWRSDTGSWGL*ACTSLKWVCSV
Trigger: CACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCACGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp ATCACCACGCTCTCGGGTGGCACCTGGCTCAGCGCATaGACGCTTGGAGCCATGGCGGCACTGCTTGGATTG +
Preference number: 6 (lower is better)
Translates to: ITTLSGGTWLSA*TLGAMAALLGL
Trigger: CAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTGAGCCAGGTGCCACCCGAGAGCGTGGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GCCACGCTGTGGAGGTGGGTGAGGTGCAGCTGGAGGTGGATCTTGTaGTTGAGCATGTCTTGGCACAGGGGACAGCGGAGCAAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: ATLWRWVRCSWRWIL*LSMSWHRGQRSKGC
Trigger: GCAGCCTTTGCTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAACAAGATCCACCTCCAGCTGCACCTCACCCACCTCCACAGCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GGTGCCACGCTGTGGAGGTGGGTGAGGTGCAGCTGGAGGTGGATCTaGTTGTTGAGCATGTCTTGGCACAGGGGACAGCGGAGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: GATLWRWVRCSWRWI*LLSMSWHRGQRSKG
Trigger: GCCTTTGCTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAACAAGATCCACCTCCAGCTGCACCTCACCCACCTCCACAGCGTGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGGCGGTCTGACACGGGCAGCTGGGGCCTCTTGGCGTGCACCTCGTaGAAATGGGTCTGCAGTGTGGCGGAGGTTTTGAAGACCTGGTTG +
Preference number: 6 (lower is better)
Translates to: WRSDTGSWGLLACTS*KWVCSVAEVLKTWL
Trigger: CAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GCCTCCTCGTCGCCGAAGCCCGCCTGGCACTTGCGGCAGACCAACTaGTACTGCACCTTTGGAACAATGAAGGGGTCACAGAGGGAGTCC +
Preference number: 6 (lower is better)
Translates to: ASSSPKPAWHLRQTN*YCTFGTMKGSQRES
Trigger: GGACTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCTTCGGCGACGAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TACAATCTGAAGGTGTCCGTTCCTACACTGGTCAGACCACTGTCCTaGGGGCAGCTGGGGTCTTTGGGACCCTCCACCGGGCTCGCCGGT +
Preference number: 6 (lower is better)
Translates to: YNLKVSVPTLVRPLS*GQLGSLGPSTGLAG
Trigger: ACCGGCGAGCCCGGTGGAGGGTCCCAAAGACCCCAGCTGCCCCAAGGACAGTGGTCTGACCAGTGTAGGAACGGACACCTTCAGATTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp AGAATGCATCATGGTCATGTGGCCGCCCAGCGAGCGTaGGGAGCCCAGGACCGTGTCACATTTGGGGCACTC +
Preference number: 6 (lower is better)
Translates to: RMHHGHVAAQRA*GAQDRVTFGAL
Trigger: GAGTGCCCCAAATGTGACACGGTCCTGGGCTCCTCACGCTCGCTGGGCGGCCACATGACCATGATGCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GACCTGGTTGCACCCCTTCTTCCAGCAGAGGAAGCCTaGGTCTTCTCTCCCGCAGCTGGGGTCAGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: DLVAPLLPAEEA*VFSPAAGVSRG
Trigger: ACCTCTGCTGACCCCAGCTGCGGGAGAGAAGACTCAGGCTTCCTCTGCTGGAAGAAGGGGTGCAACCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CCCCTGGTCTTTGGCCAGCTCCTCTGGGTCAGCAGATaGTTCGCTGGGTCCTTCGGCATCTTCAACGGCTTC +
Preference number: 6 (lower is better)
Translates to: PLVFGQLLWVSR*FAGSFGIFNGF
Trigger: GAAGCCGTTGAAGATGCCGAAGGACCCAGCGAAGCATCTGCTGACCCAGAGGAGCTGGCCAAAGACCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp GCCTCCTGCAGACTCTGCTGGTATTGCTGGTACTGCTaGAGTAGGGAGCCTGGAGACAAGCCCATCAGGGCC +
Preference number: 6 (lower is better)
Translates to: ASCRLCWYCWYC*SREPGDKPIRA
Trigger: GGCCCTGATGGGCTTGTCTCCAGGCTCCCTACTGCAGCAGTACCAGCAATACCAGCAGAGTCTGCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GGCGTCATGGCGGCCATGGGCCCTGTAGGATCCAGCTaGAATCCACTCATCATGAACTGGGCATCCGAAGCG +
Preference number: 6 (lower is better)
Translates to: GVMAAMGPVGSS*NPLIMNWASEA
Trigger: CGCTTCGGATGCCCAGTTCATGATGAGTGGATTCCAGCTGGATCCTACAGGGCCCATGGCCGCCATGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GGCAGCTGGGGCCTCTTGGCGTGCACCTCGTTGAAATaGGTCTGCAGTGTGGCGGAGGTTTTGAAGACCTGG +
Preference number: 6 (lower is better)
Translates to: GSWGLLACTSLK*VCSVAEVLKTW
Trigger: CCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CGGTACTTATACACGTGGCGGTCTGACACGGGCAGCTaGGGCCTCTTGGCGTGCACCTCGTTGAAATGGGTC +
Preference number: 6 (lower is better)
Translates to: RYLYTWRSDTGS*GLLACTSLKWV
Trigger: GACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCAGCTGCCCGTGTCAGACCGCCACGTGTATAAGTACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CAGCGCATTGACGCTTGGAGCCATGGCGGCACTGCTTaGATTGGTGGCGGTAAAGGTGTTGTTGGCGCCGCT +
Preference number: 6 (lower is better)
Translates to: QRIDAWSHGGTA*IGGGKGVVGAA
Trigger: AGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCGTGGAGGAAGCATAGTGCCCTCAGAGCCGCCCCCTaGTGCCAAGTCTTTCTTCTCTTTGGCCTTCGAGGC +
Preference number: 6 (lower is better)
Translates to: AWRKHSALRAAP*CQVFLLFGLRG
Trigger: GCCTCGAAGGCCAAAGAGAAGAAAGACTTGGCACCAGGGGGCGGCTCTGAGGGCACTATGCTTCCTCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GTGAAGCTGCTGGTGCTCCTGCCAGTGCTCGAAGGATaGGAACGCCAGCTTGCACTGGTCACACTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: VKLLVLLPVLEG*ERQLALVTLVG
Trigger: CCCTACCAGTGTGACCAGTGCAAGCTGGCGTTCCCATCCTTCGAGCACTGGCAGGAGCACCAGCAGCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CTGTTGAGGCCGGGGAGCAACACAGGAGGGATGCCCTaGAGCGCTGGATACGTGGTAGGAAGGTTAAGAGCC +
Preference number: 6 (lower is better)
Translates to: LLRPGSNTGGMP*SAGYVVGRLRA
Trigger: GGCTCTTAACCTTCCTACCACGTATCCAGCGCTCCAGGGCATCCCTCCTGTGTTGCTCCCCGGCCTCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TATTGTCCGGGCTGCTGGTGGGCTCCGGCTGGCCGGTaGCCGATTCCTGAAGGGCCCTCTTTAACTTGTGCA +
Preference number: 6 (lower is better)
Translates to: YCPGCWWAPAGR*PIPEGPSLTCA
Trigger: TGCACAAGTTAAAGAGGGCCCTTCAGGAATCGGCAACCGGCCAGCCGGAGCCCACCAGCAGCCCGGACAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GCATTGACGCTTGGAGCCATGGCGGCACTGCTTGGATaGGTGGCGGTAAAGGTGTTGTTGGCGCCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ALTLGAMAALLG*VAVKVLLAPLL
Trigger: CAGCAGCGGCGCCAACAACACCTTTACCGCCACCAATCCAAGCAGTGCCGCCATGGCTCCAAGCGTCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TCTCTTTGGCCTTCGAGGCATCTGGCAGTGATTCCTTaGGTCCCGTGTTACCCTCTGCCCCCTCCGGCCCCT +
Preference number: 6 (lower is better)
Translates to: SLWPSRHLAVIP*VPCYPLPPPAP
Trigger: AGGGGCCGGAGGGGGCAGAGGGTAACACGGGACCAAAGGAATCACTGCCAGATGCCTCGAAGGCCAAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp ACGCTGTGGAGGTGGGTGAGGTGCAGCTGGAGGTGGATCTTGTTGTaGAGCATGTCTTGGCACAGGGGACAGCGGAGCAAAGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: TLWRWVRCSWRWILL*SMSWHRGQRSKGCT
Trigger: GGTGCAGCCTTTGCTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAACAAGATCCACCTCCAGCTGCACCTCACCCACCTCCACAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TCGGAGCTGGTCATCCGTGATCCTGGTGCGAGGCCTCTTGTTCTGTaGCTGGAGCAAGGTGGGGTTGAGCTGGTGTTGGTAGAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SELVIRDPGARPLVL*LEQGGVELVLVELG
Trigger: GCCCAGCTCTACCAACACCAGCTCAACCCCACCTTGCTCCAGCAACAGAACAAGAGGCCTCGCACCAGGATCACGGATGACCAGCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp ATGCTCCATGTAGGTCTGGAGGCTGGAAAAGGAGGCTaGGCACTCGTTGCAGCTGACCTCCTTGCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: MLHVGLEAGKGG*ALVAADLLAGG
Trigger: CCCGCCAGCAAGGAGGTCAGCTGCAACGAGTGCTCAGCCTCCTTTTCCAGCCTCCAGACCTACATGGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp ATTGTTCTGTGTTTGTGCAAGGCCGACTCGAGATGCTaGCTCAGCGCTTCCTCCCCGCAGAGCGCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: IVLCLCKADSRC*LSASSPQSALS
Trigger: CGAGAGCGCGCTCTGCGGGGAGGAAGCGCTGAGTCAGCATCTCGAGTCGGCCTTGCACAAACACAGAACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CTCCTCCGCCTCTTCCTCCTCCTCTTCCTCCTCTTCTaGCTCCTCTTCCTCGGCTGGCTCTACTTTCTCGGA +
Preference number: 6 (lower is better)
Translates to: LLRLFLLLFLLF*LLFLGWLYFLG
Trigger: TCCGAGAAAGTAGAGCCAGCCGAGGAAGAGGAGGCAGAAGAGGAGGAAGAGGAGGAGGAAGAGGCGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CGGAGCCTGAATCCTCCTGCACTGACCCAGAGTCGCTaGCTGTCGGGCTCTGCTTATCTTCCAGGTCACTCT +
Preference number: 6 (lower is better)
Translates to: RSLNPPALTQSR*LSGSAYLPGHS
Trigger: AGAGTGACCTGGAAGATAAGCAGAGCCCGACAGGCAGCGACTCTGGGTCAGTGCAGGAGGATTCAGGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp GCTCCTGCCAGTGCTCGAAGGATGGGAACGCCAGCTTaGACTGGTCACACTGGTAGGGGATTAGCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: APASARRMGTPA*TGHTGRGLAEE
Trigger: CTCCTCAGCTAATCCCCTACCAGTGTGACCAGTGCAAGCTGGCGTTCCCATCCTTCGAGCACTGGCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GTCTTACACGAGTTACGAGAATGCATCATGGTCATGTaGCCGCCCAGCGAGCGTGAGGAGCCCAGGACCGTG +
Preference number: 6 (lower is better)
Translates to: VLHELRECIMVM*PPSEREEPRTV
Trigger: CACGGTCCTGGGCTCCTCACGCTCGCTGGGCGGCCACATGACCATGATGCATTCTCGTAACTCGTGTAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CTTTGGCCAGCTCCTCTGGGTCAGCAGATGCTTCGCTaGGTCCTTCGGCATCTTCAACGGCTTCCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: LWPAPLGQQMLR*VLRHLQRLPLG
Trigger: ACCCAGAGGAAGCCGTTGAAGATGCCGAAGGACCCAGCGAAGCATCTGCTGACCCAGAGGAGCTGGCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCGGAGTCTCAGAGCTACCCGGGAAGGAGGTGCGTTTaGTGGTTGCAGGGGAATCCGTCAACTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: AESQSYPGRRCV*WLQGNPSTPSL
Trigger: CAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGACTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CTGCATCATCAGTGGCGAGAAGATGGGCAGCTCCATTaGCATGGAGAGCTGGGTGAGAGGCACGGAGGGTTG +
Preference number: 6 (lower is better)
Translates to: LHHQWREDGQLH*HGELGERHGGL
Trigger: CAACCCTCCGTGCCTCTCACCCAGCTCTCCATGCCAATGGAGCTGCCCATCTTCTCGCCACTGATGATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCGAGGCTGAGGACGGTTTATTTGGTAATCCAGATGTaGGGAGGCCGGGGGAAGGTACCGTTGTGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: ARLRTVYLVIQM*GGRGKVPLCWA
Trigger: TGCCCAGCACAACGGTACCTTCCCCCGGCCTCCCCACATCTGGATTACCAAATAAACCGTCCTCAGCCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TTTGTCGGGGAGGTGGGCGCTGTTGAGTTCAGTCCATaGCCGGTGCTGAGGGATCCCGCACCCATTGTCCTT +
Preference number: 6 (lower is better)
Translates to: FVGEVGAVEFSP*PVLRDPAPIVL
Trigger: AAGGACAATGGGTGCGGGATCCCTCAGCACCGGCAATGGACTGAACTCAACAGCGCCCACCTCCCCGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TGGAGGTGGGTGAGGTGCAGCTGGAGGTGGATCTTGTaGTTGAGCATGTCTTGGCACAGGGGACAGCGGAGC +
Preference number: 6 (lower is better)
Translates to: WRWVRCSWRWIL*LSMSWHRGQRS
Trigger: GCTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAACAAGATCCACCTCCAGCTGCACCTCACCCACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CTGTGGAGGTGGGTGAGGTGCAGCTGGAGGTGGATCTaGTTGTTGAGCATGTCTTGGCACAGGGGACAGCGG +
Preference number: 6 (lower is better)
Translates to: LWRWVRCSWRWI*LLSMSWHRGQR
Trigger: CCGCTGTCCCCTGTGCCAAGACATGCTCAACAACAAGATCCACCTCCAGCTGCACCTCACCCACCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AGAGCGGAGTCTCAGAGCTACCCGGGAAGGAGGTGCGTTTGGTGGTaGCAGGGGAATCCGTCAACTCCTTCTCTGCCTGACTGGATGACG +
Preference number: 6 (lower is better)
Translates to: RAESQSYPGRRCVWW*QGNPSTPSLPDWMT
Trigger: CGTCATCCAGTCAGGCAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGACTCCGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp ACCCCTCGTTCGGTGCCGAAGATTTGGTTTCAGTCGCTATTCCTGTaGCGCTGTCGTTGTCGGCGTTGCCCTCGTCCCCTGTCGTGGTGT +
Preference number: 6 (lower is better)
Translates to: TPRSVPKIWFQSLFL*RCRCRRCPRPLSWC
Trigger: ACACCACGACAGGGGACGAGGGCAACGCCGACAACGACAGCGCAACAGGAATAGCGACTGAAACCAAATCTTCGGCACCGAACGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GAGAGGCTGCGCTCCACGTTCATGTGCAGCCCCAGCATGTCCAGGTaGTCCGTCGTGAACTTGTTGCAGACGGCACATTGGAAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: ERLRSTFMCSPSMSR*SVVNLLQTAHWKSF
Trigger: GAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCACATGAACGTGGAGCGCAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GGTGCCGAAGATTTGGTTTCAGTCGCTATTCCTGTTGCGCTGTCGTaGTCGGCGTTGCCCTCGTCCCCTGTCGTGGTGTCTGTGATTGCG +
Preference number: 6 (lower is better)
Translates to: GAEDLVSVAIPVALS*SALPSSPVVVSVIA
Trigger: CGCAATCACAGACACCACGACAGGGGACGAGGGCAACGCCGACAACGACAGCGCAACAGGAATAGCGACTGAAACCAAATCTTCGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GCTCTCTTGGCTTCGTGCCAGTGTCGAGACCGGATATaGGCCTCCAGGGCTGTCTTGGCCTTGAAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: ALLASCQCRDRI*ASRAVLALKRA
Trigger: AGCTCTCTTCAAGGCCAAGACAGCCCTGGAGGCTCATATCCGGTCTCGACACTGGCACGAAGCCAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp GCGCTGTGGCTGAAGACCTGCTCGCCCCCTCCGTTCTaGAGGTTCTGCATGTTGTTGAGATGTTTGTCGGAC +
Preference number: 6 (lower is better)
Translates to: ALWLKTCSPPPF*RFCMLLRCLSD
Trigger: GTCCGACAAACATCTCAACAACATGCAGAACCTGCAGAACGGAGGGGGCGAGCAGGTCTTCAGCCACAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CTCAGAGCTACCCGGGAAGGAGGTGCGTTTGGTGGTTaGAGGGGAATCCGTCAACTCCTTCTCTGCCTGACT +
Preference number: 6 (lower is better)
Translates to: LRATREGGAFGG*RGIRQLLLCLT
Trigger: AGTCAGGCAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp AAGAGAGCGGAGTCTCAGAGCTACCCGGGAAGGAGGTaGGTTTGGTGGTTGCAGGGGAATCCGTCAACTCCT +
Preference number: 6 (lower is better)
Translates to: KRAESQSYPGRR*VWWLQGNPSTP
Trigger: AGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGACTCCGCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TGGGGCCTCTTGGCGTGCACCTCGTTGAAATGGGTCTaGAGTGTGGCGGAGGTTTTGAAGACCTGGTTGCAC +
Preference number: 6 (lower is better)
Translates to: WGLLACTSLKWV*SVAEVLKTWLH
Trigger: GTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGTGCACGCCAAGAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp GAGTCACACTCCAGCTTCTCCAGGCTTTCACCGCCTTaGTCCGCCTTCCCGTTCTTCTTCTGTGCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ESHSSFSRLSPP*SAFPFFFCAFC
Trigger: GCAGAAGGCACAGAAGAAGAACGGGAAGGCGGAGCAAGGCGGTGAAAGCCTGGAGAAGCTGGAGTGTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TGGGTTTGGTTTGGCTGTGCACTGGGAGGGTCGGCCTaGTTTGGCTTCTCATCGCTTGCCTCTGCTTTCGAG +
Preference number: 6 (lower is better)
Translates to: WVWFGCALGGSA*FGFSSLASAFE
Trigger: CTCGAAAGCAGAGGCAAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACCAAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CGGTGCCGAAGATTTGGTTTCAGTCGCTATTCCTGTTaGGCTGTCGTTGTCGGCGTTGCCCTCGTCCCCTGT +
Preference number: 6 (lower is better)
Translates to: RCRRFGFSRYSC*AVVVGVALVPC
Trigger: ACAGGGGACGAGGGCAACGCCGACAACGACAGCGCAACAGGAATAGCGACTGAAACCAAATCTTCGGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp ATCGCCTCCTGCAGACTCTGCTGGTATTGCTGGTACTaGTGCAGTAGGGAGCCTGGAGACAAGCCCATCAGG +
Preference number: 6 (lower is better)
Translates to: IASCRLCWYCWY*CSREPGDKPIR
Trigger: CCTGATGGGCTTGTCTCCAGGCTCCCTACTGCAGCAGTACCAGCAATACCAGCAGAGTCTGCAGGAGGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GAGTCTCAGAGCTACCCGGGAAGGAGGTGCGTTTGGTaGTTGCAGGGGAATCCGTCAACTCCTTCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: ESQSYPGRRCVW*LQGNPSTPSLP
Trigger: AGGCAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTaGACGCAATCATATCCGCTAACTTCTTCCGGTTGG +
Preference number: 6 (lower is better)
Translates to: AAAAAAAAAAVA*TQSYPLTSSGW
Trigger: CCAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCATGGCAGACAGAGTCAGGTTGTAGCCGGCTCTCTTaGCTTCGTGCCAGTGTCGAGACCGGATATGAGCCT +
Preference number: 6 (lower is better)
Translates to: AWQTESGCSRLS*LRASVETGYEP
Trigger: AGGCTCATATCCGGTCTCGACACTGGCACGAAGCCAAGAGAGCCGGCTACAACCTGACTCTGTCTGCCATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CGCTCCACGTTCATGTGCAGCCCCAGCATGTCCAGGTaGTCCGTCGTGAACTTGTTGCAGACGGCACATTGG +
Preference number: 6 (lower is better)
Translates to: RSTFMCSPSMSR*SVVNLLQTAHW
Trigger: CCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCACATGAACGTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TCTCAGAGCTACCCGGGAAGGAGGTGCGTTTGGTGGTaGCAGGGGAATCCGTCAACTCCTTCTCTGCCTGAC +
Preference number: 6 (lower is better)
Translates to: SQSYPGRRCVWW*QGNPSTPSLPD
Trigger: GTCAGGCAGAGAAGGAGTTGACGGATTCCCCTGCAACCACCAAACGCACCTCCTTCCCGGGTAGCTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TTGGCGTGCACCTCGTTGAAATGGGTCTGCAGTGTGGCGGAGGTTTaGAAGACCTGGTTGCACCCCTTCTTCCAGCAGAGGAAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LACTSLKWVCSVAEV*KTWLHPFFQQRKPE
Trigger: CTCAGGCTTCCTCTGCTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGTGCACGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGCCTGGACGCAATCATATCCGCTAACTTCTTCCGGTTGGCCTCTTaGGGCTCTGAAGGGGAAGCGATGTTGGCACTGATGGGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: CLDAIISANFFRLAS*GSEGEAMLALMGFP
Trigger: GGGGAACCCCATCAGTGCCAACATCGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GGGTCGGCCTGCTTTGGCTTCTCATCGCTTGCCTCTGCTTTCGAGTaGAAGGTGGCCAGTTCATCAGTCTCCGCTGTGAGCTGCAAGAAC +
Preference number: 6 (lower is better)
Translates to: GSACFGFSSLASAFE*KVASSSVSAVSCKN
Trigger: GTTCTTGCAGCTCACAGCGGAGACTGATGAACTGGCCACCTTCAACTCGAAAGCAGAGGCAAGCGATGAGAAGCCAAAGCAGGCCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp CTTATCTCCTTCAGCTGCCCCAGAGTCCTTGCCCTCTaGGGATTTGGTAGGACTAGAAGCCAGAGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: LISFSCPRVLAL*GFGRTRSQRPQ
Trigger: CTGGGGCCTCTGGCTTCTAGTCCTACCAAATCCTCAGAGGGCAAGGACTCTGGGGCAGCTGAAGGAGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TTCCGCTCCTCTTCGCTCAGGGTCATTCGATGGTCGTaGACCGCGTGGGTCACAAATGAACGCACATACCCA +
Preference number: 6 (lower is better)
Translates to: FRSSSLRVIRWS*TAWVTNERTYP
Trigger: TGGGTATGTGCGTTCATTTGTGACCCACGCGGTGCACGACCATCGAATGACCCTGAGCGAAGAGGAGCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TTGGGGCACTTGAGCGTCTTACACGAGTTACGAGAATaGATCATGGTCATGTGGCCGCCCAGCGAGCGTGAG +
Preference number: 6 (lower is better)
Translates to: LGHLSVLHELRE*IMVMWPPSERE
Trigger: CTCACGCTCGCTGGGCGGCCACATGACCATGATGCATTCTCGTAACTCGTGTAAGACGCTCAAGTGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TCATGGCGTGCACCCGCAGCCGGTTCACGTCAGCGTTaGTATACTTGCAGTAGGGACACTGGTACATCTGCT +
Preference number: 6 (lower is better)
Translates to: SWRAPAAGSRQR*YTCSRDTGTSA
Trigger: AGCAGATGTACCAGTGTCCCTACTGCAAGTATAGCAACGCTGACGTGAACCGGCTGCGGGTGCACGCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp ACTGGGAGGGTCGGCCTGCTTTGGCTTCTCATCGCTTaGCTCTGCTTTCGAGTTGAAGGTGGCCAGTTCATC +
Preference number: 6 (lower is better)
Translates to: TGRVGLLWLLIA*LCFRVEGGQFI
Trigger: GATGAACTGGCCACCTTCAACTCGAAAGCAGAGGCAAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp AAGCCCGCCTGGCACTTGCGGCAGACCAACTTGTACTaGACCTTTGGAACAATGAAGGGGTCACAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: KPAWHLRQTNLY*TFGTMKGSQRE
Trigger: CTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCAAGTGCCAGGCGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCACATTGGAAGAGCTTCAGCGATGGGTCGTTGGTCTaGATGAAGCTCTCGCCCAGGTTCATCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AHWKSFSDGSLV*MKLSPRFISSS
Trigger: GGAGGAGCTGATGAACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CTCTCTTCCTCCTTGTCTTCCTCAACGATGATGGTGTaGTCTTCAGCCAGGGTGGGGTCTCCCATCGCCAAG +
Preference number: 6 (lower is better)
Translates to: LSSSLSSSTMMV*SSARVGSPIAK
Trigger: CTTGGCGATGGGAGACCCCACCCTGGCTGAAGACCACACCATCATCGTTGAGGAAGACAAGGAGGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CAGAGCCGCCCCCTGGTGCCAAGTCTTTCTTCTCTTTaGCCTTCGAGGCATCTGGCAGTGATTCCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: QSRPLVPSLSSL*PSRHLAVIPLV
Trigger: GACCAAAGGAATCACTGCCAGATGCCTCGAAGGCCAAAGAGAAGAAAGACTTGGCACCAGGGGGCGGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GTCCTTGCTTCTCTTGGGTTTGGTTTGGCTGTGCACTaGGAGGGTCGGCCTGCTTTGGCTTCTCATCGCTTG +
Preference number: 6 (lower is better)
Translates to: VLASLGFGLAVH*EGRPALASHRL
Trigger: CAAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACCAAACCCAAGAGAAGCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CAGACGGCACATTGGAAGAGCTTCAGCGATGGGTCGTaGGTCTGGATGAAGCTCTCGCCCAGGTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: QTAHWKSFSDGS*VWMKLSPRFIS
Trigger: GCTGATGAACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp AGCCCCAGCATGTCCAGGTTGTCCGTCGTGAACTTGTaGCAGACGGCACATTGGAAGAGCTTCAGCGATGGG +
Preference number: 6 (lower is better)
Translates to: SPSMSRLSVVNL*QTAHWKSFSDG
Trigger: CCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp AGGTGGGTGAGGTGCAGCTGGAGGTGGATCTTGTTGTaGAGCATGTCTTGGCACAGGGGACAGCGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: RWVRCSWRWILL*SMSWHRGQRSK
Trigger: TTTGCTCCGCTGTCCCCTGTGCCAAGACATGCTCAACAACAAGATCCACCTCCAGCTGCACCTCACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TGGGTCTGCAGTGTGGCGGAGGTTTTGAAGACCTGGTaGCACCCCTTCTTCCAGCAGAGGAAGCCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: WVCSVAEVLKTW*HPFFQQRKPES
Trigger: AGACTCAGGCTTCCTCTGCTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp AACCAGTGCTTGATCACTTTCTGGGGCAGGCCCGACTaGTCCGCCATCTCTTTGATCTGCTCCTCACTGGGG +
Preference number: 6 (lower is better)
Translates to: NQCLITFWGRPD*SAISLICSSLG
Trigger: CCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCAGAAAGTGATCAAGCACTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp AGTTCCTCCAGACTGGTGATGGGAGGGTTGCTGAAGTaGTACGGGGAGTCCTTGTTCCGTTGCCGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SSSRLVMGGLLK*YGESLFRCRSL
Trigger: CAAGGAGCGGCAACGGAACAAGGACTCCCCGTACAACTTCAGCAACCCTCCCATCACCAGTCTGGAGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GATTTGGTTTCAGTCGCTATTCCTGTTGCGCTGTCGTaGTCGGCGTTGCCCTCGTCCCCTGTCGTGGTGTCT +
Preference number: 6 (lower is better)
Translates to: DLVSVAIPVALS*SALPSSPVVVS
Trigger: AGACACCACGACAGGGGACGAGGGCAACGCCGACAACGACAGCGCAACAGGAATAGCGACTGAAACCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AACTTGTTGCAGACGGCACATTGGAAGAGCTTCAGCGATGGGTCGTaGGTCTGGATGAAGCTCTCGCCCAGGTTCATCAGCTCCTCCGAC +
Preference number: 6 (lower is better)
Translates to: NLLQTAHWKSFSDGS*VWMKLSPRFISSSD
Trigger: GTCGGAGGAGCTGATGAACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TTCATGTGCAGCCCCAGCATGTCCAGGTTGTCCGTCGTGAACTTGTaGCAGACGGCACATTGGAAGAGCTTCAGCGATGGGTCGTTGGTC +
Preference number: 6 (lower is better)
Translates to: FMCSPSMSRLSVVNL*QTAHWKSFSDGSLV
Trigger: GACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCACATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp ACGTTCATGTGCAGCCCCAGCATGTCCAGGTTGTCCGTCGTGAACTaGTTGCAGACGGCACATTGGAAGAGCTTCAGCGATGGGTCGTTG +
Preference number: 6 (lower is better)
Translates to: TFMCSPSMSRLSVVN*LQTAHWKSFSDGSL
Trigger: CAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCACATGAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TCGTTGAAATGGGTCTGCAGTGTGGCGGAGGTTTTGAAGACCTGGTaGCACCCCTTCTTCCAGCAGAGGAAGCCTGAGTCTTCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: SLKWVCSVAEVLKTW*HPFFQQRKPESSLP
Trigger: CGGGAGAGAAGACTCAGGCTTCCTCTGCTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp ATAGTGCCCTCAGAGCCGCCCCCTGGTGCCAAGTCTTTCTTCTCTTaGGCCTTCGAGGCATCTGGCAGTGATTCCTTTGGTCCCGTGTTA +
Preference number: 6 (lower is better)
Translates to: IVPSEPPPGAKSFFS*AFEASGSDSFGPVL
Trigger: TAACACGGGACCAAAGGAATCACTGCCAGATGCCTCGAAGGCCAAAGAGAAGAAAGACTTGGCACCAGGGGGCGGCTCTGAGGGCACTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp CCCGACTTGTCCGCCATCTCTTTGATCTGCTCCTCACTGGGGGAGTaGTTAATGTCGAAGTACTGCCTGAGCACTCGGAGCTGGTCATCC +
Preference number: 6 (lower is better)
Translates to: PDLSAISLICSSLGE*LMSKYCLSTRSWSS
Trigger: GGATGACCAGCTCCGAGTGCTCAGGCAGTACTTCGACATTAACAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp ATTGGAAGAGCTTCAGCGATGGGTCGTTGGTCTGGATaGAGCTCTCGCCCAGGTTCATCAGCTCCTCCGACA +
Preference number: 6 (lower is better)
Translates to: IGRASAMGRWSG*SSRPGSSAPPT
Trigger: TGTCGGAGGAGCTGATGAACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GTCTTTCTTCTCTTTGGCCTTCGAGGCATCTGGCAGTaGTTCCTTTGGTCCCGTGTTACCCTCTGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: VFLLFGLRGIWQ*FLWSRVTLCPL
Trigger: GAGGGGGCAGAGGGTAACACGGGACCAAAGGAATCACTGCCAGATGCCTCGAAGGCCAAAGAGAAGAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TGCTCCTCACTGGGGGAGTTGTTAATGTCGAAGTACTaGCTGAGCACTCGGAGCTGGTCATCCGTGATCCTG +
Preference number: 6 (lower is better)
Translates to: CSSLGELLMSKY*LSTRSWSSVIL
Trigger: CAGGATCACGGATGACCAGCTCCGAGTGCTCAGGCAGTACTTCGACATTAACAACTCCCCCAGTGAGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TGGGGCAGGCCCGACTTGTCCGCCATCTCTTTGATCTaGTCCTCACTGGGGGAGTTGTTAATGTCGAAGTAC +
Preference number: 6 (lower is better)
Translates to: WGRPDLSAISLI*SSLGELLMSKY
Trigger: GTACTTCGACATTAACAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp AAGAGGGGCGTTGTCGAACATCCCTTGTTGTTGAGCTaGCAGTCCGAGGACCTCGTTAGCCTTCTTGATCCG +
Preference number: 6 (lower is better)
Translates to: KRGVVEHPLLLS*QSEDLVSLLDP
Trigger: CGGATCAAGAAGGCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp ACTGGGGTTTGGCTTGCTTTGGGCTGCTGCTGCTGCTaGTGCTGCTGCTGTACTTTTTGTTGCTGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: TGVWLALGCCCC*CCCCTFCCCCC
Trigger: GCAGCAACAGCAACAAAAAGTACAGCAGCAGCAGCAGCAGCAGCAGCAGCCCAAAGCAAGCCAAACCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp AGAAGTTTCCGCTCCTCTTCGCTCAGGGTCATTCGATaGTCGTGCACCGCGTGGGTCACAAATGAACGCACA +
Preference number: 6 (lower is better)
Translates to: RSFRSSSLRVIR*SCTAWVTNERT
Trigger: TGTGCGTTCATTTGTGACCCACGCGGTGCACGACCATCGAATGACCCTGAGCGAAGAGGAGCGGAAACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp ACTGGGCATCCGAAGCGGTACTGTCCATCTTCAGGTTaGGCAGGTTCATGTTCTGGGCCAGGTAGTACTGGT +
Preference number: 6 (lower is better)
Translates to: TGHPKRYCPSSG*AGSCSGPGSTG
Trigger: ACCAGTACTACCTGGCCCAGAACATGAACCTGCCCAACCTGAAGATGGACAGTACCGCTTCGGATGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CTTGTTGCAGACGGCACATTGGAAGAGCTTCAGCGATaGGTCGTTGGTCTGGATGAAGCTCTCGCCCAGGTT +
Preference number: 6 (lower is better)
Translates to: LVADGTLEELQR*VVGLDEALAQV
Trigger: AACCTGGGCGAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp AAATGGGTCTGCAGTGTGGCGGAGGTTTTGAAGACCTaGTTGCACCCCTTCTTCCAGCAGAGGAAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: KWVCSVAEVLKT*LHPFFQQRKPE
Trigger: CTCAGGCTTCCTCTGCTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GCCTGGACGCAATCATATCCGCTAACTTCTTCCGGTTaGCCTCTTTGGGCTCTGAAGGGGAAGCGATGTTGG +
Preference number: 6 (lower is better)
Translates to: AWTQSYPLTSSG*PLWALKGKRCW
Trigger: CCAACATCGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TTGGTTTGGCTGTGCACTGGGAGGGTCGGCCTGCTTTaGCTTCTCATCGCTTGCCTCTGCTTTCGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: LVWLCTGRVGLL*LLIACLCFRVE
Trigger: TTCAACTCGAAAGCAGAGGCAAGCGATGAGAAGCCAAAGCAGGCCGACCCTCCCAGTGCACAGCCAAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TGCAGCCCCAGCATGTCCAGGTTGTCCGTCGTGAACTaGTTGCAGACGGCACATTGGAAGAGCTTCAGCGAT +
Preference number: 6 (lower is better)
Translates to: CSPSMSRLSVVN*LQTAHWKSFSD
Trigger: ATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp ACCTCGTTGAAATGGGTCTGCAGTGTGGCGGAGGTTTaGAAGACCTGGTTGCACCCCTTCTTCCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: TSLKWVCSVAEV*KTWLHPFFQQR
Trigger: CCTCTGCTGGAAGAAGGGGTGCAACCAGGTCTTCAAAACCTCCGCCACACTGCAGACCCATTTCAACGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp ACTTTCTGGGGCAGGCCCGACTTGTCCGCCATCTCTTaGATCTGCTCCTCACTGGGGGAGTTGTTAATGTCG +
Preference number: 6 (lower is better)
Translates to: TFWGRPDLSAIS*ICSSLGELLMS
Trigger: CGACATTAACAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCAGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp AGCCTGAAGAGGGGCGTTGTCGAACATCCCTTGTTGTaGAGCTGCCAGTCCGAGGACCTCGTTAGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: SLKRGVVEHPLL*SCQSEDLVSLL
Trigger: AAGAAGGCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTTCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp AAGAGCCTGAAGAGGGGCGTTGTCGAACATCCCTTGTaGTTGAGCTGCCAGTCCGAGGACCTCGTTAGCCTT +
Preference number: 6 (lower is better)
Translates to: KSLKRGVVEHPL*LSCQSEDLVSL
Trigger: AAGGCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTTCAGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GTTAAGAGCCTGAAGAGGGGCGTTGTCGAACATCCCTaGTTGTTGAGCTGCCAGTCCGAGGACCTCGTTAGC +
Preference number: 6 (lower is better)
Translates to: VKSLKRGVVEHP*LLSCQSEDLVS
Trigger: GCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTTCAGGCTCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GAGCCTTCAAACCATTTCCCGAAGGATGAGGCTATGTGGAAAGTGTaGATGATCTGCGGGTACACGGGTGCAGCACACGAAGGGTCCCCT +
Preference number: 6 (lower is better)
Translates to: EPSNHFPKDEAMWKV*MICGYTGAAHEGSP
Trigger: AGGGGACCCTTCGTGTGCTGCACCCGTGTACCCGCAGATCATCAACACTTTCCACATAGCCTCATCCTTCGGGAAATGGTTTGAAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp CAGCATGTCCAGGTTGTCCGTCGTGAACTTGTTGCAGACGGCACATaGGAAGAGCTTCAGCGATGGGTCGTTGGTCTGGATGAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: QHVQVVRRELVADGT*EELQRWVVGLDEAL
Trigger: GAGAGCTTCATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGCTGCTGTTGCCTGGACGCAATCATATCCGCTAACTTCTTCCGGTaGGCCTCTTTGGGCTCTGAAGGGGAAGCGATGTTGGCACTGATG +
Preference number: 6 (lower is better)
Translates to: CCCCLDAIISANFFR*ASLGSEGEAMLALM
Trigger: CATCAGTGCCAACATCGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGCAACAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TCGGCGTTGCCCTCGTCCCCTGTCGTGGTGTCTGTGATTGCGGTGTaGACCGAGGAACAGTCATCATTGTCCAGCTTAGTTTGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: SALPSSPVVVSVIAV*TEEQSSLSSLVWSK
Trigger: CTTTGACCAAACTAAGCTGGACAATGATGACTGTTCCTCGGTCAACACCGCAATCACAGACACCACGACAGGGGACGAGGGCAACGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGCCAGTCCGAGGACCTCGTTAGCCTTCTTGATCCGGTCCAGCTCTaGCTGAGCCATCAACTGGCGTACAGTGGCTGGGTCAAAATATTC +
Preference number: 6 (lower is better)
Translates to: CQSEDLVSLLDPVQL*LSHQLAYSGWVKIF
Trigger: GAATATTTTGACCCAGCCACTGTACGCCAGTTGATGGCTCAGCAAGAGCTGGACCGGATCAAGAAGGCTAACGAGGTCCTCGGACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AAGGTTAAGAGCCTGAAGAGGGGCGTTGTCGAACATCCCTTGTTGTaGAGCTGCCAGTCCGAGGACCTCGTTAGCCTTCTTGATCCGGTC +
Preference number: 6 (lower is better)
Translates to: KVKSLKRGVVEHPLL*SCQSEDLVSLLDPV
Trigger: GACCGGATCAAGAAGGCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTTCAGGCTCTTAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp AGGAAGGTTAAGAGCCTGAAGAGGGGCGTTGTCGAACATCCCTTGTaGTTGAGCTGCCAGTCCGAGGACCTCGTTAGCCTTCTTGATCCG +
Preference number: 6 (lower is better)
Translates to: RKVKSLKRGVVEHPL*LSCQSEDLVSLLDP
Trigger: CGGATCAAGAAGGCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTTCAGGCTCTTAACCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp TCATGTGCAGCCCCAGCATGTCCAGGTTGTCCGTCGTaGACTTGTTGCAGACGGCACATTGGAAGAGCTTCA +
Preference number: 6 (lower is better)
Translates to: SCAAPACPGCPS*TCCRRHIGRAS
Trigger: TGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTGGACATGCTGGGGCTGCACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GGGACACTGGTACATCTGCTCGGGTTTGATCTCCTCTaGTGCTTTTGGCCTCTTCGAAGAGAGCGGAGTCTC +
Preference number: 6 (lower is better)
Translates to: GTLVHLLGFDLL*CFWPLRRERSL
Trigger: GAGACTCCGCTCTCTTCGAAGAGGCCAAAAGCATCAGAGGAGATCAAACCCGAGCAGATGTACCAGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GGCTGGCCAGGAGTGGGTTACTGGGATCAAACAGCATaGAAGGCATGTCCAACGACCTGTCCAAAAACTGGG +
Preference number: 6 (lower is better)
Translates to: GWPGVGYWDQTA*KACPTTCPKTG
Trigger: CCCAGTTTTTGGACAGGTCGTTGGACATGCCTTTCATGCTGTTTGATCCCAGTAACCCACTCCTGGCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp AGATATGGTCACGTACAGACAGCCTCGCGCTGTACTTaGTGCCACACAAAGTGCACTCGGTCTTGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: RYGHVQTASRCT*CHTKCTRSWVP
Trigger: AGGGACCCAAGACCGAGTGCACTTTGTGTGGCATCAAGTACAGCGCGAGGCTGTCTGTACGTGACCATATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp ACCTCGTTAGCCTTCTTGATCCGGTCCAGCTCTTGCTaGGCCATCAACTGGCGTACAGTGGCTGGGTCAAAA +
Preference number: 6 (lower is better)
Translates to: TSLAFLIRSSSC*AINWRTVAGSK
Trigger: TTTTGACCCAGCCACTGTACGCCAGTTGATGGCTCAGCAAGAGCTGGACCGGATCAAGAAGGCTAACGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp AAAAGCCCGGTACAAAGTAAGGAAGGAACTGGCTCGTaGGCAAAGCTGTGGGGTCTGAAGTCAAGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: KSPVQSKEGTGS*AKLWGLKSRPP
Trigger: AGGCGGCCTTGACTTCAGACCCCACAGCTTTGCTCACGAGCCAGTTCCTTCCTTACTTTGTACCGGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp GGTGATGAGGGACAAAGCCCCCATCATCGCCCTCTGTaGTTTCATTTGGTTCTGGTGCTGTGGCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: GDEGQSPHHRPL*FHLVLVLWHCL
Trigger: AAGACAGTGCCACAGCACCAGAACCAAATGAAAGCACAGAGGGCGATGATGGGGGCTTTGTCCCTCATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TCTTCGCTCAGGGTCATTCGATGGTCGTGCACCGCGTaGGTCACAAATGAACGCACATACCCAAAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: SSLRVIRWSCTA*VTNERTYPKES
Trigger: ACTCTCCTTTGGGTATGTGCGTTCATTTGTGACCCACGCGGTGCACGACCATCGAATGACCCTGAGCGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp AGGTTGTCCGTCGTGAACTTGTTGCAGACGGCACATTaGAAGAGCTTCAGCGATGGGTCGTTGGTCTGGATG +
Preference number: 6 (lower is better)
Translates to: RLSVVNLLQTAH*KSFSDGSLVWM
Trigger: CATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TTGTTAATGTCGAAGTACTGCCTGAGCACTCGGAGCTaGTCATCCGTGATCCTGGTGCGAGGCCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LLMSKYCLSTRS*SSVILVRGLLF
Trigger: GAACAAGAGGCCTCGCACCAGGATCACGGATGACCAGCTCCGAGTGCTCAGGCAGTACTTCGACATTAACAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp ATGACAACCGGTCTTCATACTCGGACATTGCCATCATaGCTGCTTTGGTCAACCCCTCGTTCGGTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: MTTGLHTRTLPS*LLWSTPRSVPK
Trigger: CTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCGGTTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CAGGTTGTCCGTCGTGAACTTGTTGCAGACGGCACATaGGAAGAGCTTCAGCGATGGGTCGTTGGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: QVVRRELVADGT*EELQRWVVGLD
Trigger: ATCCAGACCAACGACCCATCGCTGAAGCTCTTCCAATGTGCCGTCTGCAACAAGTTCACGACGGACAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TGCCTGGACGCAATCATATCCGCTAACTTCTTCCGGTaGGCCTCTTTGGGCTCTGAAGGGGAAGCGATGTTG +
Preference number: 6 (lower is better)
Translates to: CLDAIISANFFR*ASLGSEGEAML
Trigger: CAACATCGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAGCGGATATGATTGCGTCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CCCTCGTCCCCTGTCGTGGTGTCTGTGATTGCGGTGTaGACCGAGGAACAGTCATCATTGTCCAGCTTAGTT +
Preference number: 6 (lower is better)
Translates to: PSSPVVVSVIAV*TEEQSSLSSLV
Trigger: AACTAAGCTGGACAATGATGACTGTTCCTCGGTCAACACCGCAATCACAGACACCACGACAGGGGACGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GCTGCTTTGGTCAACCCCTCGTTCGGTGCCGAAGATTaGGTTTCAGTCGCTATTCCTGTTGCGCTGTCGTTG +
Preference number: 6 (lower is better)
Translates to: AALVNPSFGAED*VSVAIPVALSL
Trigger: CAACGACAGCGCAACAGGAATAGCGACTGAAACCAAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CCAGACCAGATGACAACCGGTCTTCATACTCGGACATaGCCATCATGGCTGCTTTGGTCAACCCCTCGTTCG +
Preference number: 6 (lower is better)
Translates to: PDQMTTGLHTRT*PSWLLWSTPRS
Trigger: CGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCGGTTGTCATCTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp AAGATATGGTCACGTACAGACAGCCTCGCGCTGTACTaGATGCCACACAAAGTGCACTCGGTCTTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: KIWSRTDSLALY*MPHKVHSVLGP
Trigger: GGGACCCAAGACCGAGTGCACTTTGTGTGGCATCAAGTACAGCGCGAGGCTGTCTGTACGTGACCATATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TGCTTGATCACTTTCTGGGGCAGGCCCGACTTGTCCGCCATCTCTTaGATCTGCTCCTCACTGGGGGAGTTGTTAATGTCGAAGTACTGC +
Preference number: 6 (lower is better)
Translates to: CLITFWGRPDLSAIS*ICSSLGELLMSKYC
Trigger: GCAGTACTTCGACATTAACAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCAGAAAGTGATCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GTGTTTCTGAACCAGTGCTTGATCACTTTCTGGGGCAGGCCCGACTaGTCCGCCATCTCTTTGATCTGCTCCTCACTGGGGGAGTTGTTA +
Preference number: 6 (lower is better)
Translates to: VFLNQCLITFWGRPD*SAISLICSSLGELL
Trigger: TAACAACTCCCCCAGTGAGGAGCAGATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCAGAAAGTGATCAAGCACTGGTTCAGAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp TCGATCTTGAGTTCCTCCAGACTGGTGATGGGAGGGTTGCTGAAGTaGTACGGGGAGTCCTTGTTCCGTTGCCGCTCCTTGAATAGAGTG +
Preference number: 6 (lower is better)
Translates to: SILSSSRLVMGGLLK*YGESLFRCRSLNRV
Trigger: CACTCTATTCAAGGAGCGGCAACGGAACAAGGACTCCCCGTACAACTTCAGCAACCCTCCCATCACCAGTCTGGAGGAACTCAAGATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GGTAGGAAGGTTAAGAGCCTGAAGAGGGGCGTTGTCGAACATCCCTaGTTGTTGAGCTGCCAGTCCGAGGACCTCGTTAGCCTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: GRKVKSLKRGVVEHP*LLSCQSEDLVSLLD
Trigger: ATCAAGAAGGCTAACGAGGTCCTCGGACTGGCAGCTCAACAACAAGGGATGTTCGACAACGCCCCTCTTCAGGCTCTTAACCTTCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GGTCATTCGATGGTCGTGCACCGCGTGGGTCACAAATaGACGCACATACCCAAAGGAGAGTTTGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: GHSMVVHRVGHK*THIPKGEFAQE
Trigger: TTCCTGTGCAAACTCTCCTTTGGGTATGTGCGTTCATTTGTGACCCACGCGGTGCACGACCATCGAATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp AGGCAGCACATGGTGGCGGCTCTGATCACGTGGTACTaGGAGTGGAGCTGCAGCTTTTCAATGGTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: RQHMVAALITWY*EWSCSFSMVLK
Trigger: TTTCAAGACCATTGAAAAGCTGCAGCTCCACTCTCAGTACCACGTGATCAGAGCCGCCACCATGTGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GCATGTCCAACGACCTGTCCAAAAACTGGGGGTGAATaGACTGGTTCTGGGCACTCAGGAAGTGAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: ACPTTCPKTGGE*TGSGHSGSEAA
Trigger: AGCAGCTTCACTTCCTGAGTGCCCAGAACCAGTTCATTCACCCCCAGTTTTTGGACAGGTCGTTGGACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GCTATAAAAGCTCGGGGCTGGGCTGACCAGACCAGATaGCAACCGGTCTTCATACTCGGACATTGCCATCAT +
Preference number: 6 (lower is better)
Translates to: AIKARGWADQTR*QPVFILGHCHH
Trigger: ATGATGGCAATGTCCGAGTATGAAGACCGGTTGTCATCTGGTCTGGTCAGCCCAGCCCCGAGCTTTTATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp CATGACTTGAGGACCTTCAGCTGCAGATTGGTCATTTaGGTGCGAAAACGTTTCTGCCCAGGTCGATCCCCG +
Preference number: 6 (lower is better)
Translates to: HDLRTFSCRLVI*VRKRFCPGRSP
Trigger: CGGGGATCGACCTGGGCAGAAACGTTTTCGCACTCAAATGACCAATCTGCAGCTGAAGGTCCTCAAGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp TGCGGCAGACCAACTTGTACTGCACCTTTGGAACAATaGAGGGGTCACAGAGGGAGTCCGCACTTGCACTTT +
Preference number: 6 (lower is better)
Translates to: CGRPTCTAPLEQ*RGHRGSPHLHF
Trigger: AAAGTGCAAGTGCGGACTCCCTCTGTGACCCCTTCATTGTTCCAAAGGTGCAGTACAAGTTGGTCTGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp GGTGGCTCTTCAGAATCAAGATGTTGGAGAAGAGCTTaGCGCAGGAGTCACACTCCAGCTTCTCCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: GGSSESRCWRRA*RRSHTPASPGF
Trigger: AAAGCCTGGAGAAGCTGGAGTGTGACTCCTGCGGCAAGCTCTTCTCCAACATCTTGATTCTGAAGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp TGCCATCATGGCTGCTTTGGTCAACCCCTCGTTCGGTaGCGAAGATTTGGTTTCAGTCGCTATTCCTGTTGC +
Preference number: 6 (lower is better)
Translates to: CHHGCFGQPLVR*RRFGFSRYSCC
Trigger: GCAACAGGAATAGCGACTGAAACCAAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS GCA 72 bp CAACCGGTCTTCATACTCGGACATTGCCATCATGGCTaGTTTGGTCAACCCCTCGTTCGGTGCCGAAGATTT +
Preference number: 6 (lower is better)
Translates to: QPVFILGHCHHG*FGQPLVRCRRF
Trigger: AAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CCTGTAGGATCCAGCTGGAATCCACTCATCATGAACTaGGCATCCGAAGCGGTACTGTCCATCTTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: PVGSSWNPLIMN*ASEAVLSIFRL
Trigger: CAACCTGAAGATGGACAGTACCGCTTCGGATGCCCAGTTCATGATGAGTGGATTCCAGCTGGATCCTACAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GCAATCATATCCGCTAACTTCTTCCGGTTGGCCTCTTaGGGCTCTGAAGGGGAAGCGATGTTGGCACTGATG +
Preference number: 6 (lower is better)
Translates to: AIISANFFRLAS*GSEGEAMLALM
Trigger: CATCAGTGCCAACATCGCTTCCCCTTCAGAGCCCAAAGAGGCCAACCGGAAGAAGTTAGCGGATATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CGGTCTTCATACTCGGACATTGCCATCATGGCTGCTTaGGTCAACCCCTCGTTCGGTGCCGAAGATTTGGTT +
Preference number: 6 (lower is better)
Translates to: RSSYSDIAIMAA*VNPSFGAEDLV
Trigger: AACCAAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GATGACAACCGGTCTTCATACTCGGACATTGCCATCATGGCTGCTTaGGTCAACCCCTCGTTCGGTGCCGAAGATTTGGTTTCAGTCGCT +
Preference number: 6 (lower is better)
Translates to: DDNRSSYSDIAIMAA*VNPSFGAEDLVSVA
Trigger: AGCGACTGAAACCAAATCTTCGGCACCGAACGAGGGGTTGACCAAAGCAGCCATGATGGCAATGTCCGAGTATGAAGACCGGTTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GGTACTGAGAGTGGAGCTGCAGCTTTTCAATGGTCTTaGAAGCCAGGCTGCACTGGTTGCAGCGGTACTTAT +
Preference number: 6 (lower is better)
Translates to: GTESGAAAFQWS*KPGCTGCSGTY
Trigger: ATAAGTACCGCTGCAACCAGTGCAGCCTGGCTTTCAAGACCATTGAAAAGCTGCAGCTCCACTCTCAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp GCTCTCTGTATTGCTTGGCAAACCTCTCCAGCTGTTTaGAGGGGAAGTAGTTCTGATGCACGTGCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: ALCIAWQTSPAV*RGSSSDARAPG
Trigger: ACCAGGAGCACGTGCATCAGAACTACTTCCCCTTCAAACAGCTGGAGAGGTTTGCCAAGCAATACAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS TCA 72 bp TGTCATATTCCTTGCTATAAAAGCTCGGGGCTGGGCTaGCCAGACCAGATGACAACCGGTCTTCATACTCGG +
Preference number: 6 (lower is better)
Translates to: CHIPCYKSSGLG*PDQMTTGLHTR
Trigger: CCGAGTATGAAGACCGGTTGTCATCTGGTCTGGTCAGCCCAGCCCCGAGCTTTTATAGCAAGGAATATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp CATGCGCGATGTGATCCAGCATCTTTCGGGTCGGGTTaGAGTCCAGCAGATACTTCTGGTAGAGAATTTCCA +
Preference number: 6 (lower is better)
Translates to: HARCDPASFGSG*SPADTSGREFP
Trigger: TGGAAATTCTCTACCAGAAGTATCTGCTGGACTCCAACCCGACCCGAAAGATGCTGGATCACATCGCGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GGTCCAGCTCTTGCTGAGCCATCAACTGGCGTACAGTaGCTGGGTCAAAATATTCTTTCTCCTTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GPALAEPSTGVQ*LGQNILSPCPA
Trigger: AGCTGGACAAGGAGAAAGAATATTTTGACCCAGCCACTGTACGCCAGTTGATGGCTCAGCAAGAGCTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp TTAGAAGTAGTAGAAGCTGGGCCCCTCGACAGGGTCTaGAGCACATTAGGCATTAAGGGGGAGTTAGAAATG +
Preference number: 6 (lower is better)
Translates to: LEVVEAGPLDRV*STLGIKGELEM
Trigger: CATTTCTAACTCCCCCTTAATGCCTAATGTGCTCCAGACCCTGTCGAGGGGCCCAGCTTCTACTACTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp AATAGAGTGTTTCTGAACCAGTGCTTGATCACTTTCTaGGGCAGGCCCGACTTGTCCGCCATCTCTTTGATC +
Preference number: 6 (lower is better)
Translates to: NRVFLNQCLITF*GRPDLSAISLI
Trigger: GATCAAAGAGATGGCGGACAAGTCGGGCCTGCCCCAGAAAGTGATCAAGCACTGGTTCAGAAACACTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GTCGTGGTGTCTGTGATTGCGGTGTTGACCGAGGAACAGTCATCATaGTCCAGCTTAGTTTGGTCAAAGTTCAGGTTAACGGAGGACATG +
Preference number: 6 (lower is better)
Translates to: VVVSVIAVLTEEQSS*SSLVWSKFRLTEDM
Trigger: CATGTCCTCCGTTAACCTGAACTTTGACCAAACTAAGCTGGACAATGATGACTGTTCCTCGGTCAACACCGCAATCACAGACACCACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp CCTCAGGGGGTACAGTTTATCATAGTGCTCTCTGTATaGCTTGGCAAACCTCTCCAGCTGTTTGAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: PQGVQFIIVLSV*LGKPLQLFEGE
Trigger: TTCCCCTTCAAACAGCTGGAGAGGTTTGCCAAGCAATACAGAGAGCACTATGATAAACTGTACCCCCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GATTGCGGTGTTGACCGAGGAACAGTCATCATTGTCCAGCTTAGTTaGGTCAAAGTTCAGGTTAACGGAGGACATGGAGGGGCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: DCGVDRGTVIIVQLS*VKVQVNGGHGGAFK
Trigger: TTTGAAAGCCCCTCCATGTCCTCCGTTAACCTGAACTTTGACCAAACTAAGCTGGACAATGATGACTGTTCCTCGGTCAACACCGCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 90 bp GTCCAGCTGGCTTCCAATGGTGTCCTTAACTTTGGAGATATGCTGTaGAGAAAAGATATGGTCACGTACAGACAGCCTCGCGCTGTACTT +
Preference number: 6 (lower is better)
Translates to: VQLASNGVLNFGDML*RKDMVTYRQPRAVL
Trigger: AAGTACAGCGCGAGGCTGTCTGTACGTGACCATATCTTTTCTCAACAGCATATCTCCAAAGTTAAGGACACCATTGGAAGCCAGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GTTTGGTTTATCCCAAAATGCTTGGCCATGCTTAACTaGGACTTCTTCTCTTTCGCCCGGGCATTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: VWFIPKCLAMLN*DFFSFARAFWN
Trigger: GTTCCAGAATGCCCGGGCGAAAGAGAAGAAGTCCAAGTTAAGCATGGCCAAGCATTTTGGGATAAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GTCCCTCATAACTCGTTTGGTTTATCCCAAAATGCTTaGCCATGCTTAACTTGGACTTCTTCTCTTTCGCCC +
Preference number: 6 (lower is better)
Translates to: VPHNSFGLSQNA*PCLTWTSSLSP
Trigger: GGGCGAAAGAGAAGAAGTCCAAGTTAAGCATGGCCAAGCATTTTGGGATAAACCAAACGAGTTATGAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CCA 72 bp GTGGCTGGGTCAAAATATTCTTTCTCCTTGTCCAGCTaGCTTCCAATGGTGTCCTTAACTTTGGAGATATGC +
Preference number: 6 (lower is better)
Translates to: VAGSKYSFSLSS*LPMVSLTLEIC
Trigger: GCATATCTCCAAAGTTAAGGACACCATTGGAAGCCAGCTGGACAAGGAGAAAGAATATTTTGACCCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp TCTGTGATTGCGGTGTTGACCGAGGAACAGTCATCATaGTCCAGCTTAGTTTGGTCAAAGTTCAGGTTAACG +
Preference number: 6 (lower is better)
Translates to: SVIAVLTEEQSS*SSLVWSKFRLT
Trigger: CGTTAACCTGAACTTTGACCAAACTAAGCTGGACAATGATGACTGTTCCTCGGTCAACACCGCAATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2
CDS CAA 72 bp GCTTCCAATGGTGTCCTTAACTTTGGAGATATGCTGTaGAGAAAAGATATGGTCACGTACAGACAGCCTCGC +
Preference number: 6 (lower is better)
Translates to: ASNGVLNFGDML*RKDMVTYRQPR
Trigger: GCGAGGCTGTCTGTACGTGACCATATCTTTTCTCAACAGCATATCTCCAAAGTTAAGGACACCATTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043896.10
ENSMUST00000220518.2