RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFHX2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040721

Ensembl transcript IDs: ENSMUST00000036328.9

Found 576 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAACTTTGGATTTGCCATTGGTGGGCAACGCTGATCCCCGGAGGCTaGACTGCCCTTAGCAAGGCTAGGGCGAGGGGCAGGCCCATGGCT +
Preference number: 1 (lower is better)
Translates to: ELWICHWWATLIPGG*TALSKARARGRPMA
Trigger: AGCCATGGGCCTGCCCCTCGCCCTAGCCTTGCTAAGGGCAGTCCAGCCTCCGGGGATCAGCGTTGCCCACCAATGGCAAATCCAAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR TCA 90 bp ACTCTGCTGGAGGTGGGGTGTGTGAAGCCCACGGAAGGTGGGAATTaGCAGACTCCCATGAGGTGGGCAGAGCTGAAGGTTGGGGTGAGG +
Preference number: 1 (lower is better)
Translates to: TLLEVGCVKPTEGGN*QTPMRWAELKVGVR
Trigger: CCTCACCCCAACCTTCAGCTCTGCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCCACCTCCAGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 90 bp AGGCAGGACTCTGCTGGAGGTGGGGTGTGTGAAGCCCACGGAAGGTaGGAATTGACAGACTCCCATGAGGTGGGCAGAGCTGAAGGTTGG +
Preference number: 1 (lower is better)
Translates to: RQDSAGGGVCEAHGR*ELTDSHEVGRAEGW
Trigger: CCAACCTTCAGCTCTGCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCCACCTCCAGCAGAGTCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 90 bp TTATGGGCTCCTTGCCCACCCCAGGCTCCAACCATAGGAACCAACTaGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGAC +
Preference number: 1 (lower is better)
Translates to: LWAPCPPQAPTIGTN*VFGVCERSVLWTRD
Trigger: GTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTCCTATGGTTGGAGCCTGGGGTGGGCAAGGAGCCCATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR GCA 90 bp CAAAAGGGAATTTCAGAAACTAGCAGTGGCGCTAAGCATGAAGTGTaGCCTACTTCCTGGGACTCCGTGGACGCCAGGCTTTCTGACAGC +
Preference number: 1 (lower is better)
Translates to: QKGISETSSGAKHEV*PTSWDSVDARLSDS
Trigger: GCTGTCAGAAAGCCTGGCGTCCACGGAGTCCCAGGAAGTAGGGCACACTTCATGCTTAGCGCCACTGCTAGTTTCTGAAATTCCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 90 bp ATTTTTGGTATCAACAGGACTGGTTTCATCCTACCCTCAATTGGCTaGAGTGAGGAGTTTCTTAATTTTCAAAGTGAAAGTCGCAGGAGT +
Preference number: 1 (lower is better)
Translates to: IFGINRTGFILPSIG*SEEFLNFQSESRRS
Trigger: ACTCCTGCGACTTTCACTTTGAAAATTAAGAAACTCCTCACTCCAGCCAATTGAGGGTAGGATGAAACCAGTCCTGTTGATACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR GCA 90 bp CTTTACTTCATTCCTCTGGTCTCTCCATCTCTCTTTTTGTGTCTGTaGACACTCTCTCTTGCTCTTGTTTATTTTGGTGTGTTTCTTTCT +
Preference number: 1 (lower is better)
Translates to: LYFIPLVSPSLFLCL*TLSLALVYFGVFLS
Trigger: AGAAAGAAACACACCAAAATAAACAAGAGCAAGAGAGAGTGTGCACAGACACAAAAAGAGAGATGGAGAGACCAGAGGAATGAAGTAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR TCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGGAGGTGGGGTGTGTaGAGCCCACGGAAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHWRWGV*SPRKVG
Trigger: TCCCACCTTCCGTGGGCTTCACACACCCCACCTCCA...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGAGGCTGCGTTGCCTCTaGTCCTGCAGCTCCCCGGTA +
Preference number: 2 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMARLRCL*SCSSPV
Trigger: TACCGGGGAGCTGCAGGAGCAGAGGCAACGCAGCCT...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR TCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGTCCTGTCTGGGACCTaGCACAGCACGGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVVLSGT*HSTGGC
Trigger: GCAGCCTCCCGTGCTGTGTCAGGTCCCAGACAGGAC...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGGCAGAGCTGAAGGTTaGGGTGAGGGAACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHGRAEG*GEGTLR
Trigger: CCTCAGGGTTCCCTCACCCCAACCTTCAGCTCTGCC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR TCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGGGGTGAGGGAACCCTaGGGCCCTCTCTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: SRQSETCQELWGGRESMGGVREP*GPLLSP
Trigger: TGGGGACAAGAGAGGGCCTCAGGGTTCCCTCACCCC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR TCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCATTGGTGGGCAACGCTaGTCCCCGGAGGCTGGACTG +
Preference number: 2 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIIGGQR*SPEAGL
Trigger: CAGTCCAGCCTCCGGGGATCAGCGTTGCCCACCAAT...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCCACAGCACGGGAGGCTaGGTTGCCTCTGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIHSTGG*VASAPA
Trigger: TGCAGGAGCAGAGGCAACGCAGCCTCCCGTGCTGTG...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCTAACAGACCGGAACTaGCCTTGGGCAACACTTCCA +
Preference number: 2 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMALTDRN*PWATLP
Trigger: TGGAAGTGTTGCCCAAGGCCAGTTCCGGTCTGTTAG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR TCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTATGGAGGGGCTGGGCTaGGCCGGAGGTGATGAGGGC +
Preference number: 2 (lower is better)
Translates to: LRNKADPSPISLLHISIAMEGLG*AGGDEG
Trigger: GCCCTCATCACCTCCGGCTCAGCCCAGCCCCTCCAT...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCACATGCCAGGAGCTCTaGGGAGGAAGAGAGTCAATG +
Preference number: 2 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVTCQEL*GGRESM
Trigger: CATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGT...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR TCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTAGTTCTAGGGCAGACTaGTGGGTATTAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTSSRAD*WVLSGQ
Trigger: TTGCCCACTTAATACCCATCAGTCTGCCCTAGAACT...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGAGTGGGGGTGCATCTaGAAGGGGCTGAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: SRQSETCQELWGGRESMGEWGCI*KGLRMR
Trigger: CCTCATTCTCAGCCCCTTGCAGATGCACCCCCACTC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGAAAGAACTTTGGATTTaGCATTGGTGGGCAACGCTG +
Preference number: 2 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAKELWI*HWWATL
Trigger: CAGCGTTGCCCACCAATGGCAAATCCAAAGTTCTTT...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR TCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAACGGAAGGTGGGAATTaGCAGACTCCCATGAGGTGG +
Preference number: 2 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTTEGGN*QTPMRW
Trigger: CCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGT...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCTCTTTTTGTGTCTGTaGACACTCTCTCTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMALFLCL*TLSLAL
Trigger: AAGAGCAAGAGAGAGTGTGCACAGACACAAAAAGAG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCACACTGCTCTCCTGTTaGATCCTCAAGAGACTTTGC +
Preference number: 2 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVTLLSC*ILKRLC
Trigger: GCAAAGTCTCTTGAGGATGCAACAGGAGAGCAGTGT...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CAA 90 bp GACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTCTAGTGTaGACACGAGGCCAGGGAACTCTGCAAAAGCTAAGTTCTAGGGCA +
Preference number: 2 (lower is better)
Translates to: DPSPISLLHISIALV*TRGQGTLQKLSSRA
Trigger: TGCCCTAGAACTTAGCTTTTGCAGAGTTCCCTGGCCTCGTGTCAACACTAGAGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTCAATGGGAAGAAAATaGGGCAGGCAAAAGGGAATT +
Preference number: 2 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTSMGRK*GRQKGI
Trigger: AATTCCCTTTTGCCTGCCCCATTTTCTTCCCATTGA...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGGGAACAGGGGACCCTaGAAAGGGAAAAGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIGNRGP*KGKRGS
Trigger: GGAACCTCTTTTCCCTTTGCAGGGTCCCCTGTTCCC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGAGCGGTCTGTGCTCTaGACAAGGGACAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIERSVL*TRDRKK
Trigger: CTTCTTCCTGTCCCTTGTCCAGAGCACAGACCGCTC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CAA 90 bp GCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATaGTCGACATCTGTTAACTGGCATTTTTGGTATCAACAGGACTGG +
Preference number: 2 (lower is better)
Translates to: ARVSGTRPWRLTFLP*STSVNWHFWYQQDW
Trigger: CCAGTCCTGTTGATACCAAAAATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCACGGGAGGCTGCGTTaGCTCTGCTCCTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLHGRLR*LCSCSS
Trigger: GGAGCTGCAGGAGCAGAGGCAACGCAGCCTCCCGTG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACAGACTCCCATGAGGTaGGCAGAGCTGAAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTQTPMR*AELKVG
Trigger: CCCAACCTTCAGCTCTGCCCACCTCATGGGAGTCTG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAATTCAATGGGGGAAATaGGGGAACAAAGCAGACATG +
Preference number: 2 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTIQWGK*GNKADM
Trigger: CATGTCTGCTTTGTTCCCCCATTTCCCCCATTGAAT...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGAGGAAGAGAGTCAATaGGAAGAAAATGGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: LRNKADPSPISLLHISIAEEESQ*EENGAG
Trigger: GCCTGCCCCATTTTCTTCCCATTGACTCTCTTCCTC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGATGCCAGAGTGGGGGTaGATCTGCAAGGGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLMPEWG*ICKGLR
Trigger: TCTCAGCCCCTTGCAGATGCACCCCCACTCTGGCAT...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCTTTGGATTTGCCATTaGTGGGCAACGCTGATCCCC +
Preference number: 2 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLLWICH*WATLIP
Trigger: GGGGATCAGCGTTGCCCACCAATGGCAAATCCAAAG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGAGACAATCAGAAACATaGCAGGAGCTCTGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLRQSET*QELWGG
Trigger: TCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCT...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGGGAAGGAAGAGGGCTaGGAATTCAATGGGGGAAAT +
Preference number: 2 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLGKEEG*EFNGGN
Trigger: ATTTCCCCCATTGAATTCCCAGCCCTCTTCCTTCCC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CAA 90 bp CTGGCATTTTTGGTATCAACAGGACTGGTTTCATCCTACCCTCAATaGGCTGGAGTGAGGAGTTTCTTAATTTTCAAAGTGAAAGTCGCA +
Preference number: 2 (lower is better)
Translates to: LAFLVSTGLVSSYPQ*AGVRSFLIFKVKVA
Trigger: TGCGACTTTCACTTTGAAAATTAAGAAACTCCTCACTCCAGCCAATTGAGGGTAGGATGAAACCAGTCCTGTTGATACCAAAAATGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CAA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGGGGAGGGGTGTGGGTaGGTAGAGGGCTTTCTGGCA +
Preference number: 3 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHGEGCG*VEGFLA
Trigger: TGCCAGAAAGCCCTCTACCAACCCACACCCCTCCCC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CAA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGAGTTTTATGGGCTCCTaGCCCACCCCAGGCTCCAAC +
Preference number: 3 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMASFMGS*PTPGSN
Trigger: GTTGGAGCCTGGGGTGGGCAAGGAGCCCATAAAACT...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR GCA 72 bp CTGACACAGCACGGGAGGCTGCGTTGCCTCTGCTCCTaGAGCTCCCCGGTACCCAATAAGGACTTAGAGACA +
Preference number: 3 (lower is better)
Translates to: LTQHGRLRCLCS*SSPVPNKDLET
Trigger: TGTCTCTAAGTCCTTATTGGGTACCGGGGAGCTGCAGGAGCAGAGGCAACGCAGCCTCCCGTGCTGTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 72 bp TCTGCTGGAGGTGGGGTGTGTGAAGCCCACGGAAGGTaGGAATTGACAGACTCCCATGAGGTGGGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: SAGGGVCEAHGR*ELTDSHEVGRA
Trigger: AGCTCTGCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCCACCTCCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR GCA 72 bp ATTTCAGAAACTAGCAGTGGCGCTAAGCATGAAGTGTaGCCTACTTCCTGGGACTCCGTGGACGCCAGGCTT +
Preference number: 3 (lower is better)
Translates to: ISETSSGAKHEV*PTSWDSVDARL
Trigger: AAGCCTGGCGTCCACGGAGTCCCAGGAAGTAGGGCACACTTCATGCTTAGCGCCACTGCTAGTTTCTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 72 bp GCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATaGCGGCTCACTTTTCTTCCATTGTCGACATCTGTT +
Preference number: 3 (lower is better)
Translates to: AVRGARVSGTRP*RLTFLPLSTSV
Trigger: AACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR TCA 72 bp TTAAAGAACTTTGGATTTGCCATTGGTGGGCAACGCTaGTCCCCGGAGGCTGGACTGCCCTTAGCAAGGCTA +
Preference number: 3 (lower is better)
Translates to: LKNFGFAIGGQR*SPEAGLPLARL
Trigger: TAGCCTTGCTAAGGGCAGTCCAGCCTCCGGGGATCAGCGTTGCCCACCAATGGCAAATCCAAAGTTCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR GCA 72 bp ACAAAGCAGACATGTATGCCAGAGTGGGGGTGCATCTaGAAGGGGCTGAGAATGAGGGTCAGTGTGTTTGTG +
Preference number: 3 (lower is better)
Translates to: TKQTCMPEWGCI*KGLRMRVSVFV
Trigger: CACAAACACACTGACCCTCATTCTCAGCCCCTTGCAGATGCACCCCCACTCTGGCATACATGTCTGCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CAA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGCACGGGAGGCTGCGTaGCCTCTGCTCCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLAREAA*PLLLQL
Trigger: GAGCTGCAGGAGCAGAGGCAACGCAGCCTCCCGTGC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 72 bp AGAGGTTCCAGACAATCAGAAACATGCCAGGAGCTCTaGGGAGGAAGAGAGTCAATGGGAAGAAAATGGGGC +
Preference number: 3 (lower is better)
Translates to: RGSRQSETCQEL*GGRESMGRKWG
Trigger: GCCCCATTTTCTTCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR TCA 72 bp TCCAACCATAGGAACCAACTGGGTTTTTGGAGTTTGTaGGCGGTCTGTGCTCTGGACAAGGGACAGGAAGAA +
Preference number: 3 (lower is better)
Translates to: SNHRNQLGFWSL*AVCALDKGQEE
Trigger: TTCTTCCTGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTCCTATGGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 72 bp GTGTTTACAAGGGAAGGAAGAGGGCTGGGAATTCAATaGGGGAAATGGGGGAACAAAGCAGACATGTATGCC +
Preference number: 3 (lower is better)
Translates to: VFTREGRGLGIQ*GKWGNKADMYA
Trigger: GGCATACATGTCTGCTTTGTTCCCCCATTTCCCCCATTGAATTCCCAGCCCTCTTCCTTCCCTTGTAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CAA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAACTTTGGATTTGCCATaGGTGGGCAACGCTGATCCC +
Preference number: 3 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTTLDLP*VGNADP
Trigger: GGGATCAGCGTTGCCCACCAATGGCAAATCCAAAGT...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTTCTCCATCTCTCTTTTaGTGTCTGTGCACACTCTCT +
Preference number: 3 (lower is better)
Translates to: LRNKADPSPISLLHISIASPSLF*CLCTLS
Trigger: AGAGAGTGTGCACAGACACAAAAAGAGAGATGGAGA...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR GCA 72 bp AGGACACTGCTCTCCTGTTGCATCCTCAAGAGACTTTaGTGTGCTTCAGACATTCCTTCCTATACATCTCAC +
Preference number: 3 (lower is better)
Translates to: RTLLSCCILKRL*CASDIPSYTSH
Trigger: GTGAGATGTATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGAGCAGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR GCA 72 bp ACTGCTCTCCTGTTGCATCCTCAAGAGACTTTGCTGTaGTTCAGACATTCCTTCCTATACATCTCACTAGAC +
Preference number: 3 (lower is better)
Translates to: TALLLHPQETLL*FRHSFLYISLD
Trigger: GTCTAGTGAGATGTATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CAA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGAACCAACTGGGTTTTaGGAGTTTGTGAGCGGTCTG +
Preference number: 3 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLEPTGF*EFVSGL
Trigger: CAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR-3UTR CAA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGACACTGCTCTCCTGTaGCATCCTCAAGAGACTTTG +
Preference number: 3 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLDTALL*HPQETL
Trigger: CAAAGTCTCTTGAGGATGCAACAGGAGAGCAGTGTC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CCA 72 bp ATCAACAGGACTGGTTTCATCCTACCCTCAATTGGCTaGAGTGAGGAGTTTCTTAATTTTCAAAGTGAAAGT +
Preference number: 3 (lower is better)
Translates to: INRTGFILPSIG*SEEFLNFQSES
Trigger: ACTTTCACTTTGAAAATTAAGAAACTCCTCACTCCAGCCAATTGAGGGTAGGATGAAACCAGTCCTGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTGGGCTGCCGAGGTaGCCTCACTGCTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAAGLPR*PHCCPR
Trigger: GCGGGGGCAGCAGTGAGGGCACCTCGGCAGCCCAGC...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCGGCCGGCCCACCAGCTaGTCCTGGCAGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGGRPTS*SWQSGH
Trigger: GTGCCCACTCTGCCAGGAGCAGCTGGTGGGCCGGCC...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACCCGCCAGGCCCTGCCTaGAAGCCCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHPPGPA*KPCRLA
Trigger: GGCCAACCTGCAGGGCTTCCAGGCAGGGCCTGGCGG...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGTGGTGCTGCCCCGCCTaGAGGGGGCAATGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAWCCPA*RGQWEG
Trigger: CCCTTCCCATTGCCCCCTGCAGGCGGGGCAGCACCA...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCCTGGAGCCCTCGACTaGCGCCAGGGGAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAPGALD*RQGRLK
Trigger: CTTGAGCCTCCCCTGGCGCCAGTCGAGGGCTCCAGG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGTGGAGGCGGAGGAGTTaGGGGAGGGGGCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAWRRRS*GRGHCL
Trigger: CAGGCAGTGCCCCCTCCCCCAACTCCTCCGCCTCCA...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCCGTTCTGCAGCAGCTaGAGCCGCCTCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTPFCSS*SRLWAW
Trigger: CCAGGCCCAGAGGCGGCTGCAGCTGCTGCAGAACGG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGTGGCTTGGGTTGGGCTaGGGTCCCAGGTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAWLGLG*GPRWLG
Trigger: CCCTAGCCACCTGGGACCCCAGCCCAACCCAAGCCA...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGTGCAGGGAGAGGAGGTaGGTTGGCAGCGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMACRERR*VGSGQG
Trigger: TCCCTGCCCGCTGCCAACCCACCTCCTCTCCCTGCA...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGGTAGATCTAGGAGCTaGGACGGTGGCGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHGRSRS*DGGGAL
Trigger: CAGCGCCCCGCCACCGTCCCAGCTCCTAGATCTACC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGAGGTGTGGTGGCAGGTaGCCCTTTGGGGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMARCGGR*PFGGQW
Trigger: CCACTGGCCCCCAAAGGGCCACCTGCCACCACACCT...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGCTGCCTTGCGCCTGTaGGCTGAGGAGCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHAALRL*AEERRW
Trigger: CCATCTGCGCTCCTCAGCCCACAGGCGCAAGGCAGC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTGTGACTGGACAGGCTaGGGCCCTGGAAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTCDWTG*GPGRRQ
Trigger: CTGCCGCCTTCCAGGGCCTCAGCCTGTCCAGTCACA...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGAGGAGCCCAGGAGCTaGCTTGGTGGCAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHEEPRS*LGGRWV
Trigger: GACCCATCTGCCACCAAGTCAGCTCCTGGGCTCCTC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCCTGCCCGCCAGGCCCTaGCTGGAAGCCCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVLPARP*LEALQV
Trigger: AACCTGCAGGGCTTCCAGGCAGGGCCTGGCGGGCAG...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGTTCTTGGCCCCGCTCTaGTCCTTCAGCCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAFLAPL*SFSPGV
Trigger: GACGCCAGGGCTGAAGGAGCAGAGCGGGGCCAAGAA...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGGCGGGGCGCTGGGCTaGACAGATGGTAGCAAATGG +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHGGALG*TDGSKW
Trigger: CCATTTGCTACCATCTGTGCAGCCCAGCGCCCCGCC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCTCCTGAAGTACGGCTaGGCTGCCCAGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTLLKYG*AAQQAL
Trigger: CAGGGCCTGCTGGGCAGCCCAGCCGTACTTCAGGAG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCGGCTGGGCTGTCATCTaGGGATGGCGAAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGGWAVI*GWRSGQ
Trigger: CTGCCCACTTCGCCATCCCCAGATGACAGCCCAGCC...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCGGCCCCAGGGGATTCTaGTTCAGCCAGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGGPRGF*FSQAGS
Trigger: GCTTCCAGCCTGGCTGAACCAGAATCCCCTGGGGCC...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGCCAGGCAAGAGGACTaGAGCCAGGCGAGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHARQED*SQARQG
Trigger: ACCTTGCCTCGCCTGGCTCCAGTCCTCTTGCCTGGC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGATAGGCACCCGCAATaGGGCGGGCATGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVDRHPQ*GGHGGP
Trigger: GGGGCCTCCATGCCCGCCCCATTGCGGGTGCCTATC...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGCTGGAGAAGGCGGCTaGTCAGGGCTTTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTAGEGG*SGLSEG
Trigger: GCCCTCAGAAAGCCCTGATCAGCCGCCTTCTCCAGC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCCAGGGTCCTCCTCCTaGCAGGCTCCGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTPGSSS*QAPLFR
Trigger: TCTGAAGAGCGGAGCCTGTCAGGAGGAGGACCCTGG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACGACCCTCGTCCTCACTaGGTGCTGGGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHDPRPH*VLGAGG
Trigger: CCCTCCCGCCCCCAGCACTCAGTGAGGACGAGGGTC...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCCTGCCTGGAAGCCCTaGAGGTTGGCCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTPAWKP*RLARCL
Trigger: CAAGCACCTGGCCAACCTGCAGGGCTTCCAGGCAGG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGGCGTGCGTAGGTGTTaGAGCAAGGCTAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTGVRRC*SKARRE
Trigger: CTCCCGCCTAGCCTTGCTGCAACACCTACGCACGCC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCCAGGTCTTGCTGCTaGGGGTTCCAGGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAARSCC*GFQVPF
Trigger: GAACGGAACCTGGAACCCGCAGCAGCAAGACCTGGC...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGGCTGGAGATGGGGCTaGAGAAGGCGGCTGATCAGG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTGWRWG*RRRLIR
Trigger: CCTGATCAGCCGCCTTCTCCAGCCCCATCTCCAGCC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACAAAGGTGGGCCTAGCTaGGGAGGTGACTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHKGGPS*GGDSRH
Trigger: GTGCCTGGAGTCACCTCCCCAGCTAGGCCCACCTTT...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCCACCTCCCCGTCCTTaGGGTAGGCACTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAPPPRP*GRHWSQ
Trigger: TTGAGACCAGTGCCTACCCCAAGGACGGGGAGGTGG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCTGGTGGGCAGTAGCTaGGGCCTCGCCGTCAAATGC +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTLVGSS*GLAVKC
Trigger: GCATTTGACGGCGAGGCCCCAGCTACTGCCCACCAG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCCTCCTTAGAGGTGGGTaGGCTTTGGTTGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGLLRGG*ALVERE
Trigger: CTCCCGCTCAACCAAAGCTCACCCACCTCTAAGGAG...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCCAGTCTCGCCTTCCTTaGACTCTTCTTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGQSRLP*TLLGPA
Trigger: AGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTG...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACCCCGGGCTCCGGCCCTaGCTCTGCTCCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHPGLRP*LCSLHF
Trigger: GAAATGGAGGGAGCAGAGGCAGGGCCGGAGCCCGGG...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCAGGTGCCCTCACTGCTaGCCCCGCTCCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIRCPHC*PRSLVV
Trigger: CACCACCAGGGAGCGGGGGCAGCAGTGAGGGCACCT...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCCCCAGCAGGCCCTGGTaGTGGGCAGGGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIPSRPW*WAGLSF
Trigger: GAAGCTGAGCCCTGCCCACCACCAGGGCCTGCTGGG...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCACGGAGGTGGGTCACTaGTATCTTCGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGTEVGH*YLRESL
Trigger: CAGGCTCTCCCGAAGATACCAGTGACCCACCTCCGT...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGGAAGCCCTGCAGGTTaGCCAGGTGCTTGTCGGACT +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTGSPAG*PGACRT
Trigger: AGTCCGACAAGCACCTGGCCAACCTGCAGGGCTTCC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACACCCCACCAGCCCTGGTaGCAGGCCAAGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTPHQPW*QAKWQP
Trigger: GGGCTGCCACTTGGCCTGCCACCAGGGCTGGTGGGG...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGTCTGTGCTGAAAGCCTaGCACACCAGGCAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMASVLKA*HTRQRN
Trigger: GTTCCGCTGCCTGGTGTGCCAGGCTTTCAGCACAGA...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCCAGGCGAAGGTGGCGTaGCAGCGCCTGCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIQAKVA*QRLQPE
Trigger: CTCTGGCTGCAGGCGCTGCCACGCCACCTTCGCCTG...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCGGGCGGGAGGGGTGGTaGGGGCTCTGGTGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIGREGW*GLWCWY
Trigger: GTACCAACACCAGAGCCCCCACCACCCCTCCCGCCC...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGGTGACCGAACATTGTaGCCAGGGGAAGGAACGGTT +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAGDRTL*PGEGTV
Trigger: AACCGTTCCTTCCCCTGGGCACAATGTTCGGTCACC...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCCGGCGCTACAGTAGCTaGAGTGGCTGTTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVRRYSS*SGCCSR
Trigger: CCGAGAGCAACAGCCACTGCAGCTACTGTAGCGCCG...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCAACTCCCCCAGGGGTaGTTCGAAACTGACCTTTCC +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAQLPQG*FETDLS
Trigger: GGAAAGGTCAGTTTCGAAGCACCCCTGGGGGAGTTG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCGGTGGAGATGCCAGTaGTGCCTGTCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTRWRCQ*CLSAAH
Trigger: ATGAGCTGCTGACAGGCAGCACTGGCATCTCCACCG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCCAGGGGGCCATCTTTaGGATCTTCGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAPGGHL*DLRLGL
Trigger: CAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGCAGCGCAGGTGAAGTaGGGAGATGGAGCCGTAAGA +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTAAQVK*GDGAVR
Trigger: TCTTACGGCTCCATCTCCCCACTTCACCTGCGCTGC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGCCAATTCTTCAACCTaGGCATCAAGCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHANSST*ASSRGA
Trigger: AGCCCCTCGGCTTGATGCCCAGGTTGAAGAATTGGC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTCTGGCGGGCATTCTaGAACCACACTACCACCACG +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHFWRAF*NHTTTT
Trigger: CGTGGTGGTAGTGTGGTTCCAGAATGCCCGCCAGAA...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGCTGCCCCCGCTCCCTaGTGGTGCTGTTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGAAPAP*WCCSLQ
Trigger: CTGCAGGGAACAGCACCACCAGGGAGCGGGGGCAGC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGGGTGAGCTTTGGTTaGGCGGGAGGCAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIWVSFG*AGGRAL
Trigger: GAGGGCTCTGCCTCCCGCTCAACCAAAGCTCACCCA...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAGGCATAGACGGGAGGTaGGGGCGGTGCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTGIDGR*GRCLPF
Trigger: GAAGGGAAGGCACCGCCCTCACCTCCCGTCTATGCC...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCAGAGACTTTGTCTCCTaGGGGCTCAGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVRDFVS*GLSSWA
Trigger: GGCCCAGCTACTGAGCCCTCAGGAGACAAAGTCTCT...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGATGGCTGAGGTGGAAGTaGAAGGCAGGCCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGWLRWK*KAGRPT
Trigger: GGTGGGCCGGCCTGCCTTGCACTTCCACCTCAGCCA...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTTGGCGTGGCAGCGCCTaGAGCCAGAGGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIWRGSA*SQRPLQ
Trigger: CTGGAGGGGCCTCTGGCTGCAGGCGCTGCCACGCCA...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGCCGCCAGGTCTTGCTaGTGCGGGTTCCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGAARSC*CGFQVP
Trigger: CGGAACCTGGAACCCGCAGCAGCAAGACCTGGCGGC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGTACTGGCGAATCTTTaGCTTGGGTTGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTVLANL*LGLGWG
Trigger: ACCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTAC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGATTCGGGAGAGCCTGCTaGAGCTGGGAGCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGFGRAC*SWEHGH
Trigger: GTGGCCGTGCTCCCAGCTCCAGCAGGCTCTCCCGAA...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCGAAGGCGGCAGGGGCTaGAGTGTAGTCATCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIEGGRG*SVVIGQ
Trigger: CTGGCCGATGACTACACTCCAGCCCCTGCCGCCTTC...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTCCCGACAGAGGTGGGTaGGAGGGATGCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIAPDRGG*EGCLRG
Trigger: CCCCCGGAGGCATCCCTCCCACCCACCTCTGTCGGG...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACAGAGTTCAGGAGGGTTaGTGGGGGCAGCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHRVQEG*WGQPLV
Trigger: CACCAGGGGCTGCCCCCACCAACCCTCCTGAACTCT...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTGCTGGGAGAGTGTATaGACCCTCACCTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTCWESV*TLTWSH
Trigger: GTGTGACCAGGTGAGGGTCCATACACTCTCCCAGCA...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCGGAGTCAGCTGGGGTTaGTTCTGCAGAGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIGVSWG*FCRAGL
Trigger: GAGCCCCGCTCTGCAGAACCAACCCCAGCTGACTCC...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTCTTCCGTGTGGGGTTaGAGTCCTGCATGTACCAGC +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTSSVWG*SPACTS
Trigger: GCTGGTACATGCAGGACTCCAACCCCACACGGAAGA...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTTTGGGGAAGGGAGCTaGGGAGGGCGGTACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIFGEGS*GGRYSG
Trigger: CCCACTGTACCGCCCTCCCCAGCTCCCTTCCCCAAA...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCAAGCCATGTTGGATGTaGAGGGTGGTAAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGKPCWM*RVVRCE
Trigger: CTCACACCTTACCACCCTTCACATCCAACATGGCTT...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACGCCTTCCCAGGAGTTTaGAGCCGCCCATGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHAFPGV*SRPWLK
Trigger: CTTCAGCCATGGGCGGCTTCAAACTCCTGGGAAGGC...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTATGCCCCCTGTAACTaGGGACCAAAGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTYAPCN*GPKTAG
Trigger: ACCAGCTGTCTTTGGTCCTCAGTTACAGGGGGCATA...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGAGTCTTGCAGGAATTaGGTGAGTGTAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHESCRN*VSVAGT
Trigger: TGTCCCTGCTACACTCACGCAATTCCTGCAAGACTC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACAGCTGCAGTGGCTGTTaGTCTCGGGGTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHSCSGC*SRGASP
Trigger: GGGAGAAGCACCCCGAGAGCAACAGCCACTGCAGCT...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCTGTTGGTTTCGTAGCTaGACACTTTGCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGCWFRS*TLCTAR
Trigger: CCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACA...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGACGTAGGGCTAGCCAGTaGCAGCTTGGGCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGRRASQ*QLGPHL
Trigger: AAGGTGGGGCCCAAGCTGGCACTGGCTAGCCCTACG...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACCGCCTCCTGCTTCACTaGCTGTGGGAGACAGACTGC +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHRLLLH*LWETDC
Trigger: GCAGTCTGTCTCCCACAGGCAGTGAAGCAGGAGGCG...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTACAGGATCTCCAGCTaGTCAGGCAGGATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTYRISS*SGRMVV
Trigger: CACTACCATCCTGCCTGAGCAGCTGGAGATCCTGTA...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGACAGCTGGTGGTGCTaGCCCGCCTGCAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIADSWWC*PACRGQ
Trigger: TTGCCCCCTGCAGGCGGGGCAGCACCACCAGCTGTC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACCCCAAGGTCCTTTGGTaGGATGTGGCCACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHPKVLW*DVATAR
Trigger: CCTGGCTGTGGCCACATCCCACCAAAGGACCTTGGG...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAGGCTGGGCTCTTCCTTaGCGCTTGCCTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTGWALP*RLPHPR
Trigger: CCTGGGATGAGGCAAGCGCCAAGGAAGAGCCCAGCC...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAAGCAGGCCCTGGTGGTaGGCAGGGCTCAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTSRPWW*AGLSFT
Trigger: AGTGAAGCTGAGCCCTGCCCACCACCAGGGCCTGCT...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCAGGATGACTTGGTCTTaGGCTCTTTATCCCCGACAG +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGRMTWS*ALYPRQ
Trigger: CTGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCT...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCGGCTGTCCTAGGGCCTaGGGCCCAAAGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIGCPRA*GPKYWK
Trigger: CTTCCAGTACTTTGGGCCCCAGGCCCTAGGACAGCC...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCCATTTAGGAGTAGCTaGGCTTCAAGGGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAPFRSS*ASRGLS
Trigger: AGACAAGCCCCTTGAAGCCCAGCTACTCCTAAATGG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAAAACACAGGCGAAGGTaGCGTGGCAGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTKHRRR*RGSACS
Trigger: GCTGCAGGCGCTGCCACGCCACCTTCGCCTGTGTTT...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCCAGGCAGGACCGAAGTaGCAAGGCCAAGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIQAGPK*QGQEGL
Trigger: CAGGCCTTCTTGGCCTTGCCACTTCGGTCCTGCCTG...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGGGAAGGGTTGCAACTaGCTTTCGCTCACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVGKGCN*LSLTRD
Trigger: GTCTCTGGTGAGCGAAAGCCAGTTGCAACCCTTCCC...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAGGTCTCTGGAGGTGGTaGCCGAACATTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTGLWRW*PNIVPR
Trigger: CCTGGGCACAATGTTCGGTCACCACCTCCAGAGACC...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACCAGGGGGATCTTTGGTaGCAGGATCAGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHQGDLW*QDQRCW
Trigger: CCAGCACCTCTGATCCTGTCACCAAAGATCCCCCTG...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTCCAGGCATGGGTGTCTaGGGCTGTCCTAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIAPGMGV*GCPRAW
Trigger: CCAGGCCCTAGGACAGCCTCAGACACCCATGCCTGG...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCCGTAGCTGCACACTTTaGACTGCCAGGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVRSCTL*TARMTW
Trigger: CCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACG...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACAGTGGCAGCCCCTGGTaGAACATCAGGACGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHSGSPW*NIRTFC
Trigger: GCAGAACGTCCTGATGTTGCACCAGGGGCTGCCACT...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGCTGCATCTTCTCCTTaGTGTTGGACTCGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTAASSP*CWTRSH
Trigger: GTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACATGGGGGAGGGGGCACTaGCTGCTTCCCTTCGTTGTA +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTWGRGH*LLPFVV
Trigger: TACAACGAAGGGAAGCAGGCAGTGCCCCCTCCCCCA...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGACTCTCCTCCGCCTCCTaGTTCACTGCCTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGLSSAS*FTACGR
Trigger: TCTCCCACAGGCAGTGAAGCAGGAGGCGGAGGAGAG...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCGACAGTGGCTTTCAATaGTTTCAGGTTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGDSGFQ*FQVLEG
Trigger: GCCCTCAAGAACCTGAAAGCATTGAAAGCCACTGTC...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTAAAGACAGCTGGTGGTaGTGCCCCGCCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIKDSWW*CPACRG
Trigger: CCCCCTGCAGGCGGGGCAGCACCACCAGCTGTCTTT...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGCTAAAGCCTTGGATTaGGTCGAAGCCATGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHAKALD*VEAMLD
Trigger: ATCCAACATGGCTTCGACCCAATCCAAGGCTTTAGC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATACTGCCCAGCAGGCCCTaGTGGTGGGCAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPILPSRP*WWAGLS
Trigger: GCTGAGCCCTGCCCACCACCAGGGCCTGCTGGGCAG...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTATGGGGGAGGAGGTCCTaGCCCCACCAGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVWGRRS*PHQPWW
Trigger: CCACCAGGGCTGGTGGGGCCAGGACCTCCTCCCCCA...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCCAGGGCAAAGTTTGTaGTCTTCCGATAGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAPGQSL*SSDRLE
Trigger: CTCTAACCTATCGGAAGACCACAAACTTTGCCCTGG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGGCCCGATGGGTCAATaGCTGCCTTCTTCATCTTAT +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTGPMGQ*LPSSSY
Trigger: ATAAGATGAAGAAGGCAGCCATTGACCCATCGGGCC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGGAGTCGATGGTGAGTaGTCAGGAGGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGGVDGE*SGGPGW
Trigger: CCAGCCAGGACCTCCTGACCACTCACCATCGACTCC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCAGGCGAGGCAAGGTTaGGGAAGCCCCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIQARQG*GSPQGH
Trigger: GTGCCCTTGGGGGCTTCCCCAACCTTGCCTCGCCTG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGTAGGCTCGGGGGCTTaGGGTGGTTGCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIVGSGA*GGCWRR
Trigger: CCTCCTCCAGCAACCACCCCAAGCCCCCGAGCCTAC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGGTAGTAGTAGTTTTTaGGTTGGGGTCCGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTGSSSF*VGVRVR
Trigger: CCTCACACGGACCCCAACCCAAAAACTACTACTACC...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCTTTGCACTGCCAGGATaGCTTGGTCTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVFALPG*LGLGLF
Trigger: AAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAA...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAGCTCTGAGGACCTTATaGTCTCAGAGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTALRTL*SQRWRG
Trigger: CCCCCTCCACCTCTGAGAGCATAAGGTCCTCAGAGC...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCAGCTGTGGGGAACTTaGGGGCAGGCGCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIQLWGT*GQALQG
Trigger: ACCTTGGAGCGCCTGCCCGCAAGTTCCCCACAGCTG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCTCCGGCCCTGCCTCTaGTCCCTCCATTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGILRPCL*SLHFQQ
Trigger: CTGCTGGAAATGGAGGGAGCAGAGGCAGGGCCGGAG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGAGAAGCAGCTGTTGTTaGTGGAGCTTGAGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMARSSCC*WSLSSD
Trigger: ATCACTACTCAAGCTCCAGCAACAACAGCTGCTTCT...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGCGGCCCACAGGTACTaGGGGAGGAAGACTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIAAHRY*GRKTPS
Trigger: AGAGGGAGTCTTCCTCCCGCAGTACCTGTGGGCCGC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCGTAGGGAAAGGCAGGTaGGTCTCTCTTTGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIVGKGR*VSLWGF
Trigger: GAAGCCCCAAAGAGAGACGCACCTGCCTTTCCCTAC...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACTCGTCCTCACTGAGTaGTGGGGGCGGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVLVLTE*WGREGW
Trigger: CCACCCCTCCCGCCCCCAGCACTCAGTGAGGACGAG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGTGGCGGGAGTCAGCTaGGGTTGGTTCTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIVAGVS*GWFCRA
Trigger: CGCTCTGCAGAACCAACCCCAGCTGACTCCCGCCAC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACACCCCTCGAGCGTGTCTaGTGCAGAACTGATCGCATG +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTPLERV*CRTDRM
Trigger: CATGCGATCAGTTCTGCACCAGACACGCTCGAGGGG...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAGTCCTCACTGAGTGCTaGGGGCGGGAGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIVLTEC*GREGWW
Trigger: CCACCACCCCTCCCGCCCCCAGCACTCAGTGAGGAC...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCTTTAGATGGTTCCTCTaGACCCTCGTCCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVFRWFL*TLVLTE
Trigger: CTCAGTGAGGACGAGGGTCCAGAGGAACCATCTAAA...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCTTCCAAGTGGTGGCTaGGCCAGAGTTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGILPSGG*ARVGPG
Trigger: GCCTGGCCCAACTCTGGCCCAGCCACCACTTGGAAG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGCTTGGGGTGGTTGCTaGAGGAGGGCATTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIAAWGGC*RRALGS
Trigger: GCTCCCCAATGCCCTCCTCCAGCAACCACCCCAAGC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCTCGGGGGCTTGGGGTaGTTGCTGGAGGAGGGCATT +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGILGGLG*LLEEGI
Trigger: AATGCCCTCCTCCAGCAACCACCCCAAGCCCCCGAG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGATCAGAGGTGGGTGGTTaGGCTAAGGGGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGSEVGG*AKGVSE
Trigger: TTCTGACACCCCCTTAGCTCAACCACCCACCTCTGA...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACGACAGCAGAAGACCGTaGTCTGGTTGGCACTATCTC +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHDSRRP*SGWHYL
Trigger: GAGATAGTGCCAACCAGATCACGGTCTTCTGCTGTC...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTAAGGCAGTCCAGACATaGAGCCACCAGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIKAVQT*SHQGQG
Trigger: GCCCTGACCCTGGTGGCTTCATGTCTGGACTGCCTT...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGATTAGATACAGGTCTCTaGGGTAAGGGGCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGLDTGL*GKGRPG
Trigger: TCCAGGCCGCCCCTTACCTCAGAGACCTGTATCTAA...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCGATGGGTCAATGGCTaGCTTCTTCATCTTATGAAG +
Preference number: 4 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTRWVNG*LLHLMK
Trigger: CTTCATAAGATGAAGAAGGCAGCCATTGACCCATCG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACAGACCCAAGAGGCTTaGCAGGCGCTCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVQTQEA*QALHLP
Trigger: GGGGAGGTGGAGCGCCTGGCAAGCCTCTTGGGTCTG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACATGGAGATGCCAGTGCTaGCTGTCAGCAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTWRCQC*LSAAHQ
Trigger: CTGATGAGCTGCTGACAGGCAGCACTGGCATCTCCA...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGGCCTCGCCGTCAAATaGCATCTTGCACTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIGLAVK*HLALAA
Trigger: TGCCGCCAGTGCAAGATGGCATTTGACGGCGAGGCC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACGCAGGCGCTCCAAGGTaGTGGAAACCATTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHAGAPR*WKPFRS
Trigger: ACTCCTAAATGGTTTCCACCACCTTGGAGCGCCTGC...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCAGAGCTTGCAGCGGTaGGTATCCCCAGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIQSLQR*VSPATS
Trigger: GGAGGTAGCTGGGGATACCCACCGCTGCAAGCTCTG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAGGTGAAGTGGGGAGATaGAGCCGTAAGAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTGEVGR*SRKKPH
Trigger: ATGGGGCTTCTTACGGCTCCATCTCCCCACTTCACC...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCTCATCTCTACAGTTGTaGCCACAAGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVSSLQL*PQAAAS
Trigger: AGAAGCTGCTGCTTGTGGCCACAACTGTAGAGATGA...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAAGGTGCGTCTCTCTTTaGGGCTTCCTTCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGRCVSL*GFLPRF
Trigger: GAAACGGGGAAGGAAGCCCCAAAGAGAGACGCACCT...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTTGGGGGCTCTGGTGTTaGTACAGCGGCCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIWGLWC*YSGLFP
Trigger: GGGAAAGAGGCCGCTGTACCAACACCAGAGCCCCCA...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTCCTGGACCAGCAGTCTaGACCACTGTGGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIAPGPAV*TTVVAG
Trigger: GCCTGCTACCACAGTGGTCCAGACTGCTGGTCCAGG...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTAAGGGTGGTAAGGTGTaGGGAGGGGAAGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIAKGGKV*GGEVGE
Trigger: CTCACCCACTTCCCCTCCTCACACCTTACCACCCTT...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACTGATCAGGGCTTTCTaGGGGCTCCCTGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTLIRAF*GLPGAL
Trigger: GAGGGCTCCAGGGAGCCCTCAGAAAGCCCTGATCAG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTATCTGCATGTTCTGGTaGTGGGCCGCCAGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIICMFW*WAARSC
Trigger: GCAAGACCTGGCGGCCCATCACCAGAACATGCAGAT...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCCTGCACACTTTGCACTaGCAGGATGACTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDILHTLH*QDDLVL
Trigger: CAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAG...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACACAGCCAGGCTCTTCTTaGGGCTCTCCAATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTQPGSS*GSPISF
Trigger: AAAGGAGATTGGAGAGCCCCAAGAAGAGCCTGGCTG...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCGCTGCGAAGAATAAGTaGCTGCTGAGGTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIAAKNK*LLRSKG
Trigger: TCCTTTGGACCTCAGCAGCCACTTATTCTTCGCAGC...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATATATCCCCGACAGAGGTaGGTGGGAGGGATGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIYPRQR*VGGMPP
Trigger: CGGAGGCATCCCTCCCACCCACCTCTGTCGGGGATA...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTTGGCTGTTTTCTTCGTaGGCTGAACCCCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIWLFSS*AEPRVC
Trigger: GCACACCCGGGGTTCAGCCCACGAAGAAAACAGCCA...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCAAGGGAGGAGGTGGTaGGGACAAGAAAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIQGRRW*GQERQS
Trigger: GGACTGCCTTTCTTGTCCCCACCACCTCCTCCCTTG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGATTTCTAGAAGGGCTTTaGCTGCTGTGCGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGFLEGL*LLCGQL
Trigger: AAGCTGCCCGCACAGCAGCCAAAGCCCTTCTAGAAA...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACCTTGTTGGCTCCGTTTaGCTCAAGTCTTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHLVGSV*LKSSPS
Trigger: AGATGGGGAAGACTTGAGCCAAACGGAGCCAACAAG...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATACTGCCCCATGCTATCTaGAACTCCGGTCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPILPHAI*NSGPTA
Trigger: GGCGGTGGGACCGGAGTTCCAGATAGCATGGGGCAG...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAACCAAAGACAGCTGGTaGTGCTGCCCCGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTTKDSW*CCPACR
Trigger: CCTGCAGGCGGGGCAGCACCACCAGCTGTCTTTGGT...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAGGATGTTCTTCTGGGTaGAGGACTCCTTACACACAG +
Preference number: 4 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTGCSSG*RTPYTQ
Trigger: CTGTGTGTAAGGAGTCCTTCACCCAGAAGAACATCC...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAGCAGGCTCCGGCCAATaGTGCAGTGGTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIAGSGQ*CSGTAA
Trigger: TGCTGCTGTACCACTGCAGCATTGGCCGGAGCCTGC...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACCAGGTTAGAGCTTTCTaGTACTTGGTCTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHQVRAF*YLVSVG
Trigger: CCCAACAGAGACCAAGTAGCAGAAAGCTCTAACCTG...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTTTTCTTCTCAGTACCTaGCTCGCCCTCAGTCTCGCC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIFLLST*LALSLA
Trigger: GGCGAGACTGAGGGCGAGGCAGGTACTGAGAAGAAA...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAGGGCTTTGGCTGCTGTaGGGGCAGCTTCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIGLWLL*GQLHWV
Trigger: CACCCAATGAAGCTGCCCGCACAGCAGCCAAAGCCC...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAATCGCCGCTGCCCCATaGTATCTGGAACTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVIAAAP*YLELRS
Trigger: GGACCGGAGTTCCAGATAGCATGGGGCAGCGGCGAT...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGTCGGTGCGCTGGGCTaGCGAGGTGCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLVGALG*RGALTA
Trigger: AGCAGTGAGGGCACCTCGGCAGCCCAGCGCACCGAC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACAGCTGGGCTCGGACTaGCTCCTTGAGCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTQLGSD*LLELGK
Trigger: CTTGCCAAGCTCAAGGAGGCAGTCCGAGCCCAGCTG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTTTATGCTCTCAGAGGTaGAGGGGGCATCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGILCSQR*RGHQGD
Trigger: ATCCCCCTGATGCCCCCTCCACCTCTGAGAGCATAA...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACGAAGAGCTAAAGCCTTaGATTGGGTCGAAGCCATGT +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHEELKP*IGSKPC
Trigger: ACATGGCTTCGACCCAATCCAAGGCTTTAGCTCTTC...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAGCCCAGGAGCTGACTTaGTGGCAGATGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTAQELT*WQMGLR
Trigger: CCTGAGACCCATCTGCCACCAAGTCAGCTCCTGGGC...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAGGCTGCACGGCATGCTaGGAGAGTGTATGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVGCTAC*ESVWTL
Trigger: GAGGGTCCATACACTCTCCCAGCATGCCGTGCAGCC...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACAGACTCTTTGCTTTCTaGCCTTGTTGGCTCCGTTTG +
Preference number: 4 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHRLFAF*PCWLRL
Trigger: CAAACGGAGCCAACAAGGCCAGAAAGCAAAGAGTCT...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTAGCTATGCTTCCAAGTaGTGGCTGGGCCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIASYASK*WLGQSW
Trigger: CCAACTCTGGCCCAGCCACCACTTGGAAGCATAGCT...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAACAGGGCTGGGACAGTaGCTTTCAATGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGTGLGQ*LSMLSG
Trigger: ACCTGAAAGCATTGAAAGCCACTGTCCCAGCCCTGT...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTTGCTCAACAGGAGGTTaGATTTGGGGAAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIACSTGG*IWGREL
Trigger: CAGCTCCCTTCCCCAAATTCAACCTCCTGTTGAGCA...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAGCTGAACCCCGGGTGTaGAGCTGCATCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIAEPRV*SCIFSL
Trigger: CAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGC...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACATTGGGCTGCACGGCATaGTGGGAGAGTGTATGGACC +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTLGCTA*WESVWT
Trigger: GGTCCATACACTCTCCCAGCATGCCGTGCAGCCCAA...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACACCTGTACTTGGGCTaGACGGCATGCTGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTHLYLG*TACWES
Trigger: ACTCTCCCAGCATGCCGTGCAGCCCAAGTACAGGTG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACTGTGGGAGACAGACTaGCGTCATCGTGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTLWETD*RHRASA
Trigger: AGCGGAAGCACGATGACGGCAGTCTGTCTCCCACAG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACAGGATCAGAGGTGCTaGAGGAGGAGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTQDQRC*RRRSLE
Trigger: CTCCAGAGACCTCCTCCTCCAGCACCTCTGATCCTG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTCTCTCCAATCTCCTTTaGTGGGTCAAGGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGILSNLL*WVKVTA
Trigger: GGCAGTGACCTTGACCCACCAAAGGAGATTGGAGAG...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTCGTGGGACAACATTTaGTCAGAAGAGCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDISWDNI*SEELKP
Trigger: AGGCTTTAGCTCTTCTGACCAAATGTTGTCCCACGA...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAGAACACCTTCAGGGCTaGGCTGTCATCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTEHLQG*AVIWGW
Trigger: CCATCCCCAGATGACAGCCCAGCCCTGAAGGTGTTC...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACTCAAGAGGAGGATCTaGGCTGACTTCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTLKRRI*ADFWGQ
Trigger: CTGGCCCCAGAAGTCAGCCCAGATCCTCCTCTTGAG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCAGCCAGCTCAGCCTTaGGGGGTGCAGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLQPAQP*GVQGEE
Trigger: CTCCTCTCCCTGCACCCCCCAAGGCTGAGCTGGCTG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACCCTACTTCAGGTTCTaGGACCACGAAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVPYFRF*DHERWA
Trigger: GGCCCACCTTTCGTGGTCCCAGAACCTGAAGTAGGG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACATCAGGAGGTCCTGGCTaGGGAAAGAAGCGGCACACT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTSGGPG*GKKRHT
Trigger: AGTGTGCCGCTTCTTTCCCCAGCCAGGACCTCCTGA...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACATATGCTTCCAAGTGGTaGCTGGGCCAGAGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTYASKW*LGQSWA
Trigger: GGCCCAACTCTGGCCCAGCCACCACTTGGAAGCATA...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAGAGTCACATCCACGGTaGAGATGCCAGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIESHPR*RCQCCL
Trigger: CAGGCAGCACTGGCATCTCCACCGTGGATGTGACTC...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATACATTGTGAAGGTGGCTaGGGTGGAAGTGCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIHCEGG*GGSARQ
Trigger: CTGCCTTGCACTTCCACCTCAGCCACCTTCACAATG...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGATCTTCGGGAGAGCCTaGTGGAGCTGGGAGCACGGC +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLIFGRA*WSWEHG
Trigger: GCCGTGCTCCCAGCTCCAGCAGGCTCTCCCGAAGAT...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACGAAGTCACAGATGTTaGAGCGCAGGTGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVRSHRC*SAGEVG
Trigger: CCCCACTTCACCTGCGCTGCAACATCTGTGACTTCG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGTTGGGAGTGGGCTCTaGTCCAGGAGCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLVGSGL*SRSWVV
Trigger: GACCACCCAGCTCCTGGAGCAGAGCCCACTCCCAAC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTACTCCTTACACACAGTaGACTTATAGGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGITPYTQ*TYRAEQ
Trigger: CTGCTCGGCCCTATAAGTGCACTGTGTGTAAGGAGT...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACATCCTTTGGTGGGATGTaGCCACAGCCAGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTSFGGM*PQPGSS
Trigger: AGAAGAGCCTGGCTGTGGCCACATCCCACCAAAGGA...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGGCGCTGAGGTATCGTaGGACAACATTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIAGAEVS*DNIWSE
Trigger: TTCTGACCAAATGTTGTCCCACGATACCTCAGCGCC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGTTGACCATCTGCCTCTaGGGGGCCGTCCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLLTICL*GAVLSL
Trigger: CAGGCTGAGGACGGCCCCCCAGAGGCAGATGGTCAA...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGATCTTCTCCTTGCTGTTaGACTCGAAGTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SRQSETCQELWGGRESMGSSPCC*TRSHRC
Trigger: ACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGA...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATACTACTTGGTCTCTGTTaGGAGTGGGCTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPILLGLC*EWALLQ
Trigger: CTGGAGCAGAGCCCACTCCCAACAGAGACCAAGTAG...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACTGCTTCACTGCCTGTaGGAGACAGACTGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTLLHCL*ETDCRH
Trigger: ATGACGGCAGTCTGTCTCCCACAGGCAGTGAAGCAG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTAGAATAAGTGGCTGCTaGGGTCCAAAGGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIARISGC*GPKEGS
Trigger: AGATCCTTCCTTTGGACCTCAGCAGCCACTTATTCT...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGCTAGCTGGTATTTCTaGGTGTGTTTGTCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIAASWYF*VCLSVL
Trigger: CAAGACCGACAAACACACTCAGAAATACCAGCTAGC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGTTTTCTTCGTGGGCTaGACCCCGGGTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLVFFVG*TPGVQL
Trigger: CAGCTGCACACCCGGGGTTCAGCCCACGAAGAAAAC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCTGTTGCTCTCGGGGTaGTTCTCCCGCATGTGCACG +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLLLLSG*FSRMCT
Trigger: CGTGCACATGCGGGAGAAGCACCCCGAGAGCAACAG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTTCCCTTCAGACTCTTTaGTTTCTGGCCTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIASLQTL*FLALLA
Trigger: AGCCAACAAGGCCAGAAAGCAAAGAGTCTGAAGGGA...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACTCGCCTCTTGGTACTaGCGAATCTTTGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTLASWY*RIFGLG
Trigger: ACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCGGCCAATGCTGCAGTaGTACAGCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLRPMLQ*YSSSSR
Trigger: CCTGGAGCTGCTGCTGTACCACTGCAGCATTGGCCG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACACACCTGGTCACACTCTaGGCTCAGGAAGCTACAGTA +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTHLVTL*AQEATV
Trigger: TACTGTAGCTTCCTGAGCCCAGAGTGTGACCAGGTG...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCAGAAGGATCTCTGGTaGGCAGTAGCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLQKDLW*AVAGAS
Trigger: CGAGGCCCCAGCTACTGCCCACCAGAGATCCTTCTG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTATGTCTGGTGCAGAACTaGTCGCATGTGAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVCLVQN*SHVNLQ
Trigger: CTGGAGATTCACATGCGATCAGTTCTGCACCAGACA...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCATCCACGGTGGAGATaGCAGTGCTGCCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLHPRWR*QCCLSA
Trigger: TGCTGACAGGCAGCACTGGCATCTCCACCGTGGATG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAATCTTCGGTTGGGTTTaGAACCAGCTGGTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVIFGWV*NQLVAP
Trigger: TGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGAT...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGGGCCGTCCTCAGCCTaGGCTCCATTTGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLGPSSA*APFVFT
Trigger: TGTGAAGACAAATGGAGCCCAGGCTGAGGACGGCCC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAACTGCCAGGATGACTTaGTCTTGGGCTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTTARMT*SWALYP
Trigger: GGGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGT...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACATTCTCAGAAGTCATGTaGATGCGCAGGTTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTFSEVM*MRRFRE
Trigger: CTCCCGAAACCTGCGCATCCACATGACTTCTGAGAA...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCAGGAGCTGACTTGGTaGCAGATGGGTCTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLQELTW*QMGLRG
Trigger: TCCCCTGAGACCCATCTGCCACCAAGTCAGCTCCTG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTAGCAGCTGTTGTTGCTaGAGCTTGAGTAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGISSCCC*SLSSDS
Trigger: AGAATCACTACTCAAGCTCCAGCAACAACAGCTGCT...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTTGTAGAGCCTGGGTCTaGAACTCTGTAAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: LRNKADPSPISLLHISIACRAWV*NSVNLV
Trigger: AACCAAGTTTACAGAGTTCCAGACCCAGGCTCTACA...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAATCTTGCTTCCTCTTTaGCAAAAGCCACAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIILLPL*QKPQQP
Trigger: CGGCTGCTGTGGCTTTTGCCAAAGAGGAAGCAAGAT...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACATTCATGATCTTCAGCTaGAGGCTGCTCATTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTFMIFS*RLLIWV
Trigger: GACCCAAATGAGCAGCCTTCAGCTGAAGATCATGAA...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAATGCTTTCAGGTTCTTaGGGGCATCAGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTMLSGS*GHQWKS
Trigger: ACTCTTCCACTGATGCCCTCAAGAACCTGAAAGCAT...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGGGTTGGGGTCCGTGTaGGGTAATCTTGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLGLGSV*GNLASS
Trigger: AGAGGAAGCAAGATTACCTCACACGGACCCCAACCC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATATTTGGGATCTTCGGTTaGGTTTGGAACCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIFGIFG*VWNQLV
Trigger: TACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAA...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAGGTTTCGGGAGATGTTaGTTTCGTAGCTGCACACTT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTGFGRC*FRSCTL
Trigger: AAGTGTGCAGCTACGAAACCAACATCTCCCGAAACC...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACCTTGGGGTAGGCACTaGTCTCAAAGAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVPWGRH*SQRKTV
Trigger: TACAGTCTTTCTTTGAGACCAGTGCCTACCCCAAGG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATACTGGTTCAGCCAGGCTaGAAGCAGATGAATCACTTA +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPILVQPG*KQMNHL
Trigger: TAAGTGATTCATCTGCTTCCAGCCTGGCTGAACCAG...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAGTATCACCGGGTTCATaGGAAATAGCCCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIVSPGS*EIAPSS
Trigger: TGAAGAAGGGGCTATTTCCCATGAACCCGGTGATAC...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CAA 72 bp TCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATaGTCGACATCTGTTAACTGGCATTTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: SGTRPWRLTFLP*STSVNWHFWYQ
Trigger: TTGATACCAAAAATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACTAAGTCATAGCATTTaGTTTCGCTCTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVLSHSI*FRSSAG
Trigger: CCCAGCTGAAGAGCGAAAGCAAATGCTATGACTTAG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCGTCAAATGCCATCTTaGACTGGCGGCACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLRQMPS*TGGTSS
Trigger: GCTACTTGTGCCGCCAGTGCAAGATGGCATTTGACG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGAGCTTTCTGCTACTTaGTCTCTGTTGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLELSAT*SLLGVG
Trigger: GCCCACTCCCAACAGAGACCAAGTAGCAGAAAGCTC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAAACAGGATGTTCTTCTaGGTGAAGGACTCCTTACAC +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVNRMFF*VKDSLH
Trigger: GTGTAAGGAGTCCTTCACCCAGAAGAACATCCTGTT...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTATGTGAATCTCCAGTGTaGAGCTCTGGTTATAGGACA +
Preference number: 4 (lower is better)
Translates to: GILICPDTSYLRGQRSSVCESPV*SSGYRT
Trigger: TGTCCTATAACCAGAGCTCCACACTGGAGATTCACA...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp TCTCCTGTTGCATCCTCAAGAGACTTTGCTGTGCTTCAGACATTCCTTCCTATAAAAGACTGTAGAGCCTaGGTCTGGAACTCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: SPVASSRDFAVLQTFLPIKDCRA*VWNSVN
Trigger: GTTTACAGAGTTCCAGACCCAGGCTCTACAGTCTTT...TATAGGAAGGAATGTCTGAAGCACAGCAAAGTCTCTTGAGGATGCAACAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGTGCACTTGGGACACTTaGGAGTCTTGCAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLCTWDT*ESCRNC
Trigger: GCAATTCCTGCAAGACTCTCAAGTGTCCCAAGTGCA...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAAGGAAGCATTTTGGTTaGGAAGGTCATCTCTACAGT +
Preference number: 4 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTRKHFG*EGHLYS
Trigger: ACTGTAGAGATGACCTTCGCAACCAAAATGCTTCCT...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGCATCAGTGGAAGAGTTaGGAAGGGTTGCAACTGGCT +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLHQWKS*EGLQLA
Trigger: AGCCAGTTGCAACCCTTCCCAACTCTTCCACTGATG...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR TCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGTTGTTGCTGGAGCTTaGGTAGTGATTCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLVVAGA*VVILEP
Trigger: TGGTTCCAGAATCACTACTCAAGCTCCAGCAACAAC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
3UTR CAA 72 bp TTGGTATCAACAGGACTGGTTTCATCCTACCCTCAATaGGCTGGAGTGAGGAGTTTCTTAATTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LVSTGLVSSYPQ*AGVRSFLIFKV
Trigger: CACTTTGAAAATTAAGAAACTCCTCACTCCAGCCAATTGAGGGTAGGATGAAACCAGTCCTGTTGATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGATAGCCCCTTCTTCATaGCGTAAAGCTGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLIAPSS*RKAVGS
Trigger: ACTTCCAACAGCTTTACGGCATGAAGAAGGGGCTAT...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR GCA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGAACATCAGGACGTTCTaGATGTGTTTCTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLNIRTF*MCFSEV
Trigger: GACTTCTGAGAAACACATGCAGAACGTCCTGATGTT...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GCAGCTGCAGCCGCCTCTGGGCCTGGGCGTCCCGGTGGGCAGGCGTaGGTAGGTGTTGCAGCAAGGCTAGGCGGGAGGGCGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: AAAAASGPGRPGGQA*VGVAARLGGRACPR
Trigger: CCTGGGACACGCCCTCCCGCCTAGCCTTGCTGCAACACCTACGCACGCCTGCCCACCGGGACGCCCAGGCCCAGAGGCGGCTGCAGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp CGCCTCTGGGCCTGGGCGTCCCGGTGGGCAGGCGTGCGTAGGTGTTaGAGCAAGGCTAGGCGGGAGGGCGTGTCCCAGGCGCACAACAGG +
Preference number: 5 (lower is better)
Translates to: RLWAWASRWAGVRRC*SKARREGVSQAHNR
Trigger: CCTGTTGTGCGCCTGGGACACGCCCTCCCGCCTAGCCTTGCTGCAACACCTACGCACGCCTGCCCACCGGGACGCCCAGGCCCAGAGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GGGAGGGATGCCTCCGGGGGACTCGCCTGCCCGCCAGGCCCTGCCTaGAAGCCCTGCAGGTTGGCCAGGTGCTTGTCGGACTGCATGTGG +
Preference number: 5 (lower is better)
Translates to: GRDASGGLACPPGPA*KPCRLARCLSDCMW
Trigger: CCACATGCAGTCCGACAAGCACCTGGCCAACCTGCAGGGCTTCCAGGCAGGGCCTGGCGGGCAGGCGAGTCCCCCGGAGGCATCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp CTTGGTCTTGGGCTCTTTATCCCCGACAGAGGTGGGTGGGAGGGATaGCTCCGGGGGACTCGCCTGCCCGCCAGGCCCTGCCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LGLGLFIPDRGGWEG*LRGTRLPARPCLEA
Trigger: GGCTTCCAGGCAGGGCCTGGCGGGCAGGCGAGTCCCCCGGAGGCATCCCTCCCACCCACCTCTGTCGGGGATAAAGAGCCCAAGACCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGGGGGCGGGGCTGCCTaGCGCCTGTGGGCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAGGGAA*RLWAEE
Trigger: CTCCTCAGCCCACAGGCGCAAGGCAGCCCCGCCCCC...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GGAGGGCCATGCCGCCATCATGACCCTCCTGAAGTACGGCTGGGCTaGCCAGCAGGCCCTGGTGGTGGGCAGGGCTCAGCTTCACTCCAT +
Preference number: 5 (lower is better)
Translates to: GGPCRHHDPPEVRLG*PAGPGGGQGSASLH
Trigger: ATGGAGTGAAGCTGAGCCCTGCCCACCACCAGGGCCTGCTGGGCAGCCCAGCCGTACTTCAGGAGGGTCATGATGGCGGCATGGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp CACAGTAGGGACAGTCGGTGCGCTGGGCTGCCGAGGTGCCCTCACTaGTGCCCCCGCTCCCTGGTGGTGCTGTTCCCTGCAGTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: HSRDSRCAGLPRCPH*CPRSLVVLFPAVWL
Trigger: AAGCCAAACTGCAGGGAACAGCACCACCAGGGAGCGGGGGCAGCAGTGAGGGCACCTCGGCAGCCCAGCGCACCGACTGTCCCTACTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp ACTGCCAGGATGACTTGGTCTTGGGCTCTTTATCCCCGACAGAGGTaGGTGGGAGGGATGCCTCCGGGGGACTCGCCTGCCCGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: TARMTWSWALYPRQR*VGGMPPGDSPARQA
Trigger: GGCCTGGCGGGCAGGCGAGTCCCCCGGAGGCATCCCTCCCACCCACCTCTGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GCTGGGCTTCAAGGGGCTTGTCTGGCCTCAGCCCGGGCCCAGGCATaGGTGTCTGAGGCTGTCCTAGGGCCTGGGGCCCAAAGTACTGGA +
Preference number: 5 (lower is better)
Translates to: AGLQGACLASARAQA*VSEAVLGPGAQSTG
Trigger: TCCAGTACTTTGGGCCCCAGGCCCTAGGACAGCCTCAGACACCCATGCCTGGGCCCGGGCTGAGGCCAGACAAGCCCCTTGAAGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TGGCTGAGGTGGAAGTGCAAGGCAGGCCGGCCCACCAGCTGCTCCTaGCAGAGTGGGCACCTGTACTTGGGCTGCACGGCATGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: WLRWKCKAGRPTSCS*QSGHLYLGCTACWE
Trigger: CTCCCAGCATGCCGTGCAGCCCAAGTACAGGTGCCCACTCTGCCAGGAGCAGCTGGTGGGCCGGCCTGCCTTGCACTTCCACCTCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GGCGGCGGGCGGTGGGATGCCCGCCTCGCCTCGGGCAGGGCCCGATaGGTCAATGGCTGCCTTCTTCATCTTATGAAGGTGAGAGACGGA +
Preference number: 5 (lower is better)
Translates to: GGGRWDARLASGRAR*VNGCLLHLMKVRDG
Trigger: TCCGTCTCTCACCTTCATAAGATGAAGAAGGCAGCCATTGACCCATCGGGCCCTGCCCGAGGCGAGGCGGGCATCCCACCGCCCGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp CACCTCGCAGGCCAGGCAGTGGTAGGTGCAGATAGGCACCCGCAATaGGGCGGGCATGGAGGCCCCAGAGCCCCGCCCAAAGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: HLAGQAVVGADRHPQ*GGHGGPRAPPKEAE
Trigger: TTCTGCTTCTTTGGGCGGGGCTCTGGGGCCTCCATGCCCGCCCCATTGCGGGTGCCTATCTGCACCTACCACTGCCTGGCCTGCGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GCAGCAGCTTCTCGACGCACTCGGGCACCACATTGTGAAGGTGGCTaGGGTGGAAGTGCAAGGCAGGCCGGCCCACCAGCTGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AAASRRTRAPHCEGG*GGSARQAGPPAAPG
Trigger: GCCAGGAGCAGCTGGTGGGCCGGCCTGCCTTGCACTTCCACCTCAGCCACCTTCACAATGTGGTGCCCGAGTGCGTCGAGAAGCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp CTGGTTATAGGACACTCGGCAGACTGTGCACTTAAAGGGCTTGTCTaGCGCAGTGGCGGCGGGCGGTGGGATGCCCGCCTCGCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LVIGHSADCALKGLV*RSGGGRWDARLASG
Trigger: GCCCGAGGCGAGGCGGGCATCCCACCGCCCGCCGCCACTGCGTCAGACAAGCCCTTTAAGTGCACAGTCTGCCGAGTGTCCTATAACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp CTGGAACCACACTACCACCACGCGGCTAGCCAGACCCAAGAGGCTTaGCAGGCGCTCCACCTCCCCGTCCTTGGGGTAGGCACTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LEPHYHHAASQTQEA*QALHLPVLGVGTGL
Trigger: GAGACCAGTGCCTACCCCAAGGACGGGGAGGTGGAGCGCCTGGCAAGCCTCTTGGGTCTGGCTAGCCGCGTGGTGGTAGTGTGGTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GGAACCAGTCTGGCCCCGCCTCGCCTCTTGGTACTGGCGAATCTTTaGCTTGGGTTGGGCTGGGGTCCCAGGTGGCTAGGGCTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GTSLAPPRLLVLANL*LGLGWGPRWLGLWV
Trigger: CACCCACAGCCCTAGCCACCTGGGACCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGGCGGGGCCAGACTGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GGCAGGGGCTGGAGTGTAGTCATCGGCCAGGCGACAGGACGGAGGTaGGTCACTGGTATCTTCGGGAGAGCCTGCTGGAGCTGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: GRGWSVVIGQATGRR*VTGIFGRACWSWEH
Trigger: GTGCTCCCAGCTCCAGCAGGCTCTCCCGAAGATACCAGTGACCCACCTCCGTCCTGTCGCCTGGCCGATGACTACACTCCAGCCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACGTGGCAGGTGGCCCTTaGGGGGCCAGTGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHVAGGP*GASGVS
Trigger: CGAGACCCCACTGGCCCCCAAAGGGCCACCTGCCAC...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GTGGCCACAAGCAGCAGCTTCTCGACGCACTCGGGCACCACATTGTaGAGGTGGCTGAGGTGGAAGTGCAAGGCAGGCCGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: VATSSSFSTHSGTTL*RWLRWKCKAGRPTS
Trigger: GCTGGTGGGCCGGCCTGCCTTGCACTTCCACCTCAGCCACCTTCACAATGTGGTGCCCGAGTGCGTCGAGAAGCTGCTGCTTGTGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GGTGAGCTTTGGTTGAGCGGGAGGCAGAGCCCTCCATCCTCTTCCTaGCCCTCAGGGAACCAGTCTGGCCCCGCCTCGCCTCTTGGTACT +
Preference number: 5 (lower is better)
Translates to: GELWLSGRQSPPSSS*PSGNQSGPASPLGT
Trigger: AGTACCAAGAGGCGAGGCGGGGCCAGACTGGTTCCCTGAGGGGCAGGAAGAGGATGGAGGGCTCTGCCTCCCGCTCAACCAAAGCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp CTGGAGTGTAGTCATCGGCCAGGCGACAGGACGGAGGTGGGTCACTaGTATCTTCGGGAGAGCCTGCTGGAGCTGGGAGCACGGCCACCT +
Preference number: 5 (lower is better)
Translates to: LECSHRPGDRTEVGH*YLRESLLELGARPP
Trigger: AGGTGGCCGTGCTCCCAGCTCCAGCAGGCTCTCCCGAAGATACCAGTGACCCACCTCCGTCCTGTCGCCTGGCCGATGACTACACTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp TCAAGGGGCTTGTCTGGCCTCAGCCCGGGCCCAGGCATGGGTGTCTaGGGCTGTCCTAGGGCCTGGGGCCCAAAGTACTGGAAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SRGLSGLSPGPGMGV*GCPRAWGPKYWKSS
Trigger: TGAACTCTTCCAGTACTTTGGGCCCCAGGCCCTAGGACAGCCTCAGACACCCATGCCTGGGCCCGGGCTGAGGCCAGACAAGCCCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GGCTGGGCTGTCATCTGGGGATGGCGAAGTGGGCAGCCCATCAGATaGGGAGCCCAGGAGCTGACTTGGTGGCAGATGGGTCTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GWAVIWGWRSGQPIR*GAQELTWWQMGLRG
Trigger: TCCCCTGAGACCCATCTGCCACCAAGTCAGCTCCTGGGCTCCTCATCTGATGGGCTGCCCACTTCGCCATCCCCAGATGACAGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GGCCAATGCTGCAGTGGTACAGCAGCAGCTCCAGGCTGTCTGTGCTaGAAGCCTGGCACACCAGGCAGCGGAACACCTTCAGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GQCCSGTAAAPGCLC*KPGTPGSGTPSGLG
Trigger: GCCCAGCCCTGAAGGTGTTCCGCTGCCTGGTGTGCCAGGCTTTCAGCACAGACAGCCTGGAGCTGCTGCTGTACCACTGCAGCATTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp CCGCCTCCTGCTTCACTGCCTGTGGGAGACAGACTGCCGTCATCGTaGTTCCGCTTGAGGGGTGTCCCGGTCACTGATGAGGTGCCCGAT +
Preference number: 5 (lower is better)
Translates to: PPPASLPVGDRLPSS*FRLRGVPVTDEVPD
Trigger: ATCGGGCACCTCATCAGTGACCGGGACACCCCTCAAGCGGAAGCACGATGACGGCAGTCTGTCTCCCACAGGCAGTGAAGCAGGAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp TCAGCTGAAGGCTGCTCATTTGGGTCCGATATCGCCGCTGCCCCATaGTATCTGGAACTCCGGTCCCACCGCCTGGTCCCCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: SAEGCSFGSDIAAAP*YLELRSHRLVPHWS
Trigger: GGACCAGTGGGGGACCAGGCGGTGGGACCGGAGTTCCAGATAGCATGGGGCAGCGGCGATATCGGACCCAAATGAGCAGCCTTCAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GAAGTCATACTTAACGTCACAGTAGGGACAGTCGGTGCGCTGGGCTaGCGAGGTGCCCTCACTGCTGCCCCCGCTCCCTGGTGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: EVILNVTVGTVGALG*RGALTAAPAPWWCC
Trigger: ACAGCACCACCAGGGAGCGGGGGCAGCAGTGAGGGCACCTCGGCAGCCCAGCGCACCGACTGTCCCTACTGTGACGTTAAGTATGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TTGCGGGCAGGCGCTCCAAGGTGGTGGAAACCATTTAGGAGTAGCTaGGCTTCAAGGGGCTTGTCTGGCCTCAGCCCGGGCCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: LRAGAPRWWKPFRSS*ASRGLSGLSPGPGM
Trigger: CATGCCTGGGCCCGGGCTGAGGCCAGACAAGCCCCTTGAAGCCCAGCTACTCCTAAATGGTTTCCACCACCTTGGAGCGCCTGCCCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TCAGTACCTGCCTCGCCCTCAGTCTCGCCTTCCTTGAACTCTTCTTaGCCCCGCTCTGCTCCTTCAGCCCTGGCGTCGATCTTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SVPASPSVSPSLNSS*PRSAPSALASILAP
Trigger: GGGGGCCAAGATCGACGCCAGGGCTGAAGGAGCAGAGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCAGGTACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCGGGAGTCAGCTGGGGTaGGTTCTGCAGAGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGGSQLG*VLQSGA
Trigger: AGCCCCGCTCTGCAGAACCAACCCCAGCTGACTCCC...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCCAGACCCAAGAGGCTaGCCAGGCGCTCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTPDPRG*PGAPPP
Trigger: GGGAGGTGGAGCGCCTGGCAAGCCTCTTGGGTCTGG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp AGCTGCTCCTGGCAGAGTGGGCACCTGTACTTGGGCTGCACGGCATaGTGGGAGAGTGTATGGACCCTCACCTGGTCACACTCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: SCSWQSGHLYLGCTA*WESVWTLTWSHSGL
Trigger: GAGCCCAGAGTGTGACCAGGTGAGGGTCCATACACTCTCCCAGCATGCCGTGCAGCCCAAGTACAGGTGCCCACTCTGCCAGGAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TTGGTGGCAGATGGGTCTCAGGGGAGAGGCTGCCAGGGGCAGCTGTaGGGAACTTGCGGGCAGGCGCTCCAAGGTGGTGGAAACCATTTA +
Preference number: 5 (lower is better)
Translates to: LVADGSQGRGCQGQL*GTCGQALQGGGNHL
Trigger: TAAATGGTTTCCACCACCTTGGAGCGCCTGCCCGCAAGTTCCCCACAGCTGCCCCTGGCAGCCTCTCCCCTGAGACCCATCTGCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp AGCGGAACACCTTCAGGGCTGGGCTGTCATCTGGGGATGGCGAAGTaGGCAGCCCATCAGATGAGGAGCCCAGGAGCTGACTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SGTPSGLGCHLGMAK*AAHQMRSPGADLVA
Trigger: TGCCACCAAGTCAGCTCCTGGGCTCCTCATCTGATGGGCTGCCCACTTCGCCATCCCCAGATGACAGCCCAGCCCTGAAGGTGTTCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TGCTCCTGGCAGAGTGGGCACCTGTACTTGGGCTGCACGGCATGCTaGGAGAGTGTATGGACCCTCACCTGGTCACACTCTGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: CSWQSGHLYLGCTAC*ESVWTLTWSHSGLR
Trigger: CCTGAGCCCAGAGTGTGACCAGGTGAGGGTCCATACACTCTCCCAGCATGCCGTGCAGCCCAAGTACAGGTGCCCACTCTGCCAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp ACTGGGTTCCGCTCCCCAAACACCAGCAAGGGTAGATCTAGGAGCTaGGACGGTGGCGGGGCGCTGGGCTGCACAGATGGTAGCAAATGG +
Preference number: 5 (lower is better)
Translates to: TGFRSPNTSKGRSRS*DGGGALGCTDGSKW
Trigger: CCATTTGCTACCATCTGTGCAGCCCAGCGCCCCGCCACCGTCCCAGCTCCTAGATCTACCCTTGCTGGTGTTTGGGGAGCGGAACCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TGGACTGCAAGCCTCGCTTTCTGGAGACGCTTTAGATGGTTCCTCTaGACCCTCGTCCTCACTGAGTGCTGGGGGCGGGAGGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: WTASLAFWRRFRWFL*TLVLTECWGREGWW
Trigger: CCACCACCCCTCCCGCCCCCAGCACTCAGTGAGGACGAGGGTCCAGAGGAACCATCTAAAGCGTCTCCAGAAAGCGAGGCTTGCAGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp TGCAGGAATTGCGTGAGTGTAGCAGGGACATGTGACTGGACAGGCTaGGGCCCTGGAAGGCGGCAGGGGCTGGAGTGTAGTCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: CRNCVSVAGTCDWTG*GPGRRQGLECSHRP
Trigger: TGGCCGATGACTACACTCCAGCCCCTGCCGCCTTCCAGGGCCTCAGCCTGTCCAGTCACATGTCCCTGCTACACTCACGCAATTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GGCCTTTCTTCTCAGTACCTGCCTCGCCCTCAGTCTCGCCTTCCTTaGACTCTTCTTGGCCCCGCTCTGCTCCTTCAGCCCTGGCGTCGA +
Preference number: 5 (lower is better)
Translates to: GLSSQYLPRPQSRLP*TLLGPALLLQPWRR
Trigger: TCGACGCCAGGGCTGAAGGAGCAGAGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCAGGTACTGAGAAGAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp ACATCGCCCTGTGGTCTTCCCGTCGGCTCCCCAGGGGGCCATCTTTaGGATCTTCGGTTGGGTTTGGAACCAGCTGGTAGCTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: TSPCGLPVGSPGGHL*DLRLGLEPAGSSRR
Trigger: CCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGAGCCGACGGGAAGACCACAGGGCGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GGTCCTGGCCCCACCAGCCCTGGTGGCAGGCCAAGTGGCAGCCCCTaGTGCAACATCAGGACGTTCTGCATGTGTTTCTCAGAAGTCATG +
Preference number: 5 (lower is better)
Translates to: GPGPTSPGGRPSGSP*CNIRTFCMCFSEVM
Trigger: CATGACTTCTGAGAAACACATGCAGAACGTCCTGATGTTGCACCAGGGGCTGCCACTTGGCCTGCCACCAGGGCTGGTGGGGCCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp CTGCAGTGGTACAGCAGCAGCTCCAGGCTGTCTGTGCTGAAAGCCTaGCACACCAGGCAGCGGAACACCTTCAGGGCTGGGCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LQWYSSSSRLSVLKA*HTRQRNTFRAGLSS
Trigger: AGATGACAGCCCAGCCCTGAAGGTGTTCCGCTGCCTGGTGTGCCAGGCTTTCAGCACAGACAGCCTGGAGCTGCTGCTGTACCACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GGGCGCTGGGCTGCACAGATGGTAGCAAATGGAGTCGATGGTGAGTaGTCAGGAGGTCCTGGCTGGGGAAAGAAGCGGCACACTGGTCAC +
Preference number: 5 (lower is better)
Translates to: GRWAAQMVANGVDGE*SGGPGWGKKRHTGH
Trigger: GTGACCAGTGTGCCGCTTCTTTCCCCAGCCAGGACCTCCTGACCACTCACCATCGACTCCATTTGCTACCATCTGTGCAGCCCAGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TCCTGCCGATGGACTGCAAGCCTCGCTTTCTGGAGACGCTTTAGATaGTTCCTCTGGACCCTCGTCCTCACTGAGTGCTGGGGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: SCRWTASLAFWRRFR*FLWTLVLTECWGRE
Trigger: CTCCCGCCCCCAGCACTCAGTGAGGACGAGGGTCCAGAGGAACCATCTAAAGCGTCTCCAGAAAGCGAGGCTTGCAGTCCATCGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGTGCACTTAAAGGGCTaGTCTGACGCAGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAVHLKG*SDAVAA
Trigger: CGCCGCCACTGCGTCAGACAAGCCCTTTAAGTGCAC...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp CTTCACTGCCTGTGGGAGACAGACTGCCGTCATCGTGCTTCCGCTTaGGGGGTGTCCCGGTCACTGATGAGGTGCCCGATACTACTGGGT +
Preference number: 5 (lower is better)
Translates to: LHCLWETDCRHRASA*GVSRSLMRCPILLG
Trigger: ACCCAGTAGTATCGGGCACCTCATCAGTGACCGGGACACCCCTCAAGCGGAAGCACGATGACGGCAGTCTGTCTCCCACAGGCAGTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GTCCCAGGCGCACAACAGGCAGTGGTAAAGCCCGGGCTCCGGCCCTaGCTCTGCTCCCTCCATTTCCAGCAGAAACTTATAGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: VPGAQQAVVKPGLRP*LCSLHFQQKLIDLA
Trigger: AGCCAGATCTATAAGTTTCTGCTGGAAATGGAGGGAGCAGAGGCAGGGCCGGAGCCCGGGCTTTACCACTGCCTGTTGTGCGCCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GGCGGCACAAGTAGCGGTGAGTCACATCCACGGTGGAGATGCCAGTaGTGCCTGTCAGCAGCTCATCAGCCTCACTACTTTCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: GGTSSGESHPRWRCQ*CLSAAHQPHYFPLP
Trigger: GGGAAGGGGAAAGTAGTGAGGCTGATGAGCTGCTGACAGGCAGCACTGGCATCTCCACCGTGGATGTGACTCACCGCTACTTGTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GCAGAAGGATCTCTGGTGGGCAGTAGCTGGGGCCTCGCCGTCAAATaGCATCTTGCACTGGCGGCACAAGTAGCGGTGAGTCACATCCAC +
Preference number: 5 (lower is better)
Translates to: AEGSLVGSSWGLAVK*HLALAAQVAVSHIH
Trigger: GTGGATGTGACTCACCGCTACTTGTGCCGCCAGTGCAAGATGGCATTTGACGGCGAGGCCCCAGCTACTGCCCACCAGAGATCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GGCCCACCCTCACAGGCATTTTTACGGGCTTTCTGGCGGGCATTCTaGAACCACACTACCACCACGCGGCTAGCCAGACCCAAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: GPPSQAFLRAFWRAF*NHTTTTRLARPKRL
Trigger: AAGCCTCTTGGGTCTGGCTAGCCGCGTGGTGGTAGTGTGGTTCCAGAATGCCCGCCAGAAAGCCCGTAAAAATGCCTGTGAGGGTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp ACACCAGCAAGGGTAGATCTAGGAGCTGGGACGGTGGCGGGGCGCTaGGCTGCACAGATGGTAGCAAATGGAGTCGATGGTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: TPARVDLGAGTVAGR*AAQMVANGVDGEWS
Trigger: TGACCACTCACCATCGACTCCATTTGCTACCATCTGTGCAGCCCAGCGCCCCGCCACCGTCCCAGCTCCTAGATCTACCCTTGCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp AGAGCCCCGCCCAAAGAAGCAGAAGGATCTCTGGTGGGCAGTAGCTaGGGCCTCGCCGTCAAATGCCATCTTGCACTGGCGGCACAAGTA +
Preference number: 5 (lower is better)
Translates to: RAPPKEAEGSLVGSS*GLAVKCHLALAAQV
Trigger: TACTTGTGCCGCCAGTGCAAGATGGCATTTGACGGCGAGGCCCCAGCTACTGCCCACCAGAGATCCTTCTGCTTCTTTGGGCGGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGCCCAGGGGAAGCCCTTaGGTAACGAGAGTTCACTGC +
Preference number: 5 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAPRGSP*VTRVHC
Trigger: GCAGTGAACTCTCGTTACCAAAGGGCTTCCCCTGGG...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCCTAGCCAGTGCCAGCTaGGGCCCCACCTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVLASAS*GPTLRS
Trigger: TGACCTCAAGGTGGGGCCCAAGCTGGCACTGGCTAG...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCCAGGTGCGTCTCTCTTaGGGGCTTCCTTCCCCGTTT +
Preference number: 5 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGQVRLS*GLPSPF
Trigger: AAACGGGGAAGGAAGCCCCAAAGAGAGACGCACCTG...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCCTGAAGGCTGCTCATTaGGGTCCGATATCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGLKAAH*GPISPL
Trigger: CAGCGGCGATATCGGACCCAAATGAGCAGCCTTCAG...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp TCCAGACATGAAGCCACCAGGGTCAGGGCCTTTCTTCTCAGTACCTaGCTCGCCCTCAGTCTCGCCTTCCTTGAACTCTTCTTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SRHEATRVRAFLLST*LALSLAFLELFLAP
Trigger: CGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCAGGTACTGAGAAGAAAGGCCCTGACCCTGGTGGCTTCATGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp TGCACTGGCGGCACAAGTAGCGGTGAGTCACATCCACGGTGGAGATaGCAGTGCTGCCTGTCAGCAGCTCATCAGCCTCACTACTTTCCC +
Preference number: 5 (lower is better)
Translates to: CTGGTSSGESHPRWR*QCCLSAAHQPHYFP
Trigger: GGGAAAGTAGTGAGGCTGATGAGCTGCTGACAGGCAGCACTGGCATCTCCACCGTGGATGTGACTCACCGCTACTTGTGCCGCCAGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp CCGTCGGCTCCCCAGGGGGCCATCTTTGGGATCTTCGGTTGGGTTTaGAACCAGCTGGTAGCTCCAGAAGGATCCATCCCTTCTCTCACA +
Preference number: 5 (lower is better)
Translates to: PSAPQGAIFGIFGWV*NQLVAPEGSIPSLT
Trigger: TGTGAGAGAAGGGATGGATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGAGCCGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GTCTTCCCGTCGGCTCCCCAGGGGGCCATCTTTGGGATCTTCGGTTaGGTTTGGAACCAGCTGGTAGCTCCAGAAGGATCCATCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VFPSAPQGAIFGIFG*VWNQLVAPEGSIPS
Trigger: AGAAGGGATGGATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGAGCCGACGGGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp CGTGGGCTGAACCCCGGGTGTGCAGCTGCATCTTCTCCTTGCTGTTaGACTCGAAGTCACAGATGTTGCAGCGCAGGTGAAGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RGLNPGCAAASSPCC*TRSHRCCSAGEVGR
Trigger: TCTCCCCACTTCACCTGCGCTGCAACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp AGAAGGGCTTTGGCTGCTGTGCGGGCAGCTTCATTGGGTGATGTGTaGGTTGGTGAAGAAGGCCCCGCTTCAGTCCCCTCTTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: RRALAAVRAASLGDV*VGEEGPASVPSSAM
Trigger: CATGGCTGAAGAGGGGACTGAAGCGGGGCCTTCTTCACCAACCCACACATCACCCAATGAAGCTGCCCGCACAGCAGCCAAAGCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp CCATCTTGCACTGGCGGCACAAGTAGCGGTGAGTCACATCCACGGTaGAGATGCCAGTGCTGCCTGTCAGCAGCTCATCAGCCTCACTAC +
Preference number: 5 (lower is better)
Translates to: PSCTGGTSSGESHPR*RCQCCLSAAHQPHY
Trigger: GTAGTGAGGCTGATGAGCTGCTGACAGGCAGCACTGGCATCTCCACCGTGGATGTGACTCACCGCTACTTGTGCCGCCAGTGCAAGATGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACCAGCCTGGGCTCCATTaGTCTTCACAGTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHQPGLH*SSQSLC
Trigger: GCACAGTGACTGTGAAGACAAATGGAGCCCAGGCTG...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCGCATCAGTGGAAGAGTaGGGAAGGGTTGCAACTGGC +
Preference number: 5 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGASVEE*GRVATG
Trigger: GCCAGTTGCAACCCTTCCCAACTCTTCCACTGATGC...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp AGTTTGAAGCCGCCCATGGCTGAAGCTCAGAATACTCTGGAGAGCTaGGAGTCCTTCTTCAGCGGCTGGGCCGTTCTGCAGCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SLKPPMAEAQNTLES*ESFFSGWAVLQQLQ
Trigger: CTGCAGCTGCTGCAGAACGGCCCAGCCGCTGAAGAAGGACTCTCAGCTCTCCAGAGTATTCTGAGCTTCAGCCATGGGCGGCTTCAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GGTGGTTGCTGGAGGAGGGCATTGGGGAGCAGCCCAATAAGGGTCTaGGGTATCACCGGGTTCATGGGAAATAGCCCCTTCTTCATGCCG +
Preference number: 5 (lower is better)
Translates to: GGCWRRALGSSPIRV*GITGFMGNSPFFMP
Trigger: CGGCATGAAGAAGGGGCTATTTCCCATGAACCCGGTGATACCTCAGACCCTTATTGGGCTGCTCCCCAATGCCCTCCTCCAGCAACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GGTGGCAGGCCAAGTGGCAGCCCCTGGTGCAACATCAGGACGTTCTaGATGTGTTTCTCAGAAGTCATGTGGATGCGCAGGTTTCGGGAG +
Preference number: 5 (lower is better)
Translates to: GGRPSGSPWCNIRTF*MCFSEVMWMRRFRE
Trigger: CTCCCGAAACCTGCGCATCCACATGACTTCTGAGAAACACATGCAGAACGTCCTGATGTTGCACCAGGGGCTGCCACTTGGCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp AAGAGGAGGATCTGGGCTGACTTCTGGGGCCAGGTTAGAGCTTTCTaGTACTTGGTCTCTGTTGGGAGTGGGCTCTGCTCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KRRIWADFWGQVRAF*YLVSVGSGLCSRSW
Trigger: CCAGCTCCTGGAGCAGAGCCCACTCCCAACAGAGACCAAGTAGCAGAAAGCTCTAACCTGGCCCCAGAAGTCAGCCCAGATCCTCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp TGGGATGCCCGCCTCGCCTCGGGCAGGGCCCGATGGGTCAATGGCTaGCTTCTTCATCTTATGAAGGTGAGAGACGGAGTTGTAATGAAC +
Preference number: 5 (lower is better)
Translates to: WDARLASGRARWVNG*LLHLMKVRDGVVMN
Trigger: GTTCATTACAACTCCGTCTCTCACCTTCATAAGATGAAGAAGGCAGCCATTGACCCATCGGGCCCTGCCCGAGGCGAGGCGGGCATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TATAACCTCTTCAGCGGGGAGAACAAGGGCTTGACCATCTGCCTCTaGGGGGCCGTCCTCAGCCTGGGCTCCATTTGTCTTCACAGTCAC +
Preference number: 5 (lower is better)
Translates to: YNLFSGENKGLTICL*GAVLSLGSICLHSH
Trigger: GTGACTGTGAAGACAAATGGAGCCCAGGCTGAGGACGGCCCCCCAGAGGCAGATGGTCAAGCCCTTGTTCTCCCCGCTGAAGAGGTTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TGGTTTCGTAGCTGCACACTTTGCACTGCCAGGATGACTTGGTCTTaGGCTCTTTATCCCCGACAGAGGTGGGTGGGAGGGATGCCTCCG +
Preference number: 5 (lower is better)
Translates to: WFRSCTLCTARMTWS*ALYPRQRWVGGMPP
Trigger: CGGAGGCATCCCTCCCACCCACCTCTGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp CACGGCATGCTGGGAGAGTGTATGGACCCTCACCTGGTCACACTCTaGGCTCAGGAAGCTACAGTAGGGACAGCAGAAGACCGTGATCTG +
Preference number: 5 (lower is better)
Translates to: HGMLGECMDPHLVTL*AQEATVGTAEDRDL
Trigger: CAGATCACGGTCTTCTGCTGTCCCTACTGTAGCTTCCTGAGCCCAGAGTGTGACCAGGTGAGGGTCCATACACTCTCCCAGCATGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GTCTTCAATCTTGCTCAACAGGAGGTTGAATTTGGGGAAGGGAGCTaGGGAGGGCGGTACAGTGGGCTTGACTGCTGGACCGGCAACTCC +
Preference number: 5 (lower is better)
Translates to: VFNLAQQEVEFGEGS*GGRYSGLDCWTGNS
Trigger: GGAGTTGCCGGTCCAGCAGTCAAGCCCACTGTACCGCCCTCCCCAGCTCCCTTCCCCAAATTCAACCTCCTGTTGAGCAAGATTGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACGCTCTTCCTTGGCGCTaGCCTCATCCCAGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHALPWR*PHPRGS
Trigger: GCTTCCCCTGGGATGAGGCAAGCGCCAAGGAAGAGC...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GTGGGTCTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGTGGGTCGAAGCCATGTaGGATGTGAAGGGTGGTAAG +
Preference number: 5 (lower is better)
Translates to: VGLCSCKRRQSVRDQTMAWVEAM*DVKGGK
Trigger: CTTACCACCCTTCACATCCAACATGGCTTCGACCCA...CGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACAGAGTCTTGCAGGAATaGCGTGAGTGTAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHRVLQE*RECSRD
Trigger: GTCCCTGCTACACTCACGCAATTCCTGCAAGACTCT...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCGTGTGTTTGTCGGTCTaGAGGTGGAGCTGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGVCLSV*RWSWKL
Trigger: CAACTTCCAGCTCCACCTCAAGACCGACAAACACAC...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTCACTTCGGAAGCCTGTaGTTCCGTCTTGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTHFGSL*FRLVLG
Trigger: GCCCAGAACAAGACGGAACAACAGGCTTCCGAAGTG...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACATGTAGGCTCGGGGGCTaGGGGTGGTTGCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTCRLGG*GWLLEE
Trigger: CTCCTCCAGCAACCACCCCAAGCCCCCGAGCCTACA...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp AGGGGGTGTCAGAAGCCTTCCCAGGAGTTTGAAGCCGCCCATGGCTaGAGCTCAGAATACTCTGGAGAGCTGAGAGTCCTTCTTCAGCGG +
Preference number: 5 (lower is better)
Translates to: RGCQKPSQEFEAAHG*SSEYSGELRVLLQR
Trigger: CCGCTGAAGAAGGACTCTCAGCTCTCCAGAGTATTCTGAGCTTCAGCCATGGGCGGCTTCAAACTCCTGGGAAGGCTTCTGACACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GGGAAGGGTTGCAACTGGCTTTCGCTCACCAGAGACTTTGTCTCCTaGGGGCTCAGTAGCTGGGCCAGGGGTAGGGTCAGTAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: GKGCNWLSLTRDFVS*GLSSWARGRVSRTV
Trigger: AACAGTTCTACTGACCCTACCCCTGGCCCAGCTACTGAGCCCTCAGGAGACAAAGTCTCTGGTGAGCGAAAGCCAGTTGCAACCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp AGGCATAGACGGGAGGTGAGGGCGGTGCCTTCCCTTCAGACTCTTTaGTTTCTGGCCTTGTTGGCTCCGTTTGGCTCAAGTCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: RHRREVRAVPSLQTL*FLALLAPFGSSLPH
Trigger: ATGGGGAAGACTTGAGCCAAACGGAGCCAACAAGGCCAGAAAGCAAAGAGTCTGAAGGGAAGGCACCGCCCTCACCTCCCGTCTATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp TCCTCAGAGATACAGTCGAGCATCTTCCGTGTGGGGTTGGAGTCCTaGATGTACCAGCGGTACAGGATCTCCAGCTGCTCAGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SSEIQSSIFRVGLES*MYQRYRISSCSGRM
Trigger: CATCCTGCCTGAGCAGCTGGAGATCCTGTACCGCTGGTACATGCAGGACTCCAACCCCACACGGAAGATGCTCGACTGTATCTCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp GTCCCACTTCCTCAGAGATACAGTCGAGCATCTTCCGTGTGGGGTTaGAGTCCTGCATGTACCAGCGGTACAGGATCTCCAGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VPLPQRYSRASSVWG*SPACTSGTGSPAAQ
Trigger: CTGAGCAGCTGGAGATCCTGTACCGCTGGTACATGCAGGACTCCAACCCCACACGGAAGATGCTCGACTGTATCTCTGAGGAAGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCAGAAGAGCTAAAGCCTaGGATTGGGTCGAAGCCATG +
Preference number: 5 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGRRAKA*DWVEAM
Trigger: CATGGCTTCGACCCAATCCAAGGCTTTAGCTCTTCT...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCAATCTTTGGCTTGGGTaGGGCTGGGGTCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDINLWLG*GWGPRW
Trigger: CCACCTGGGACCCCAGCCCAACCCAAGCCAAAGATT...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGTGGGTGAGCTTTGGTaGAGCGGGAGGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SRQSETCQELWGGRESMGVGELW*SGRQSP
Trigger: AGGGCTCTGCCTCCCGCTCAACCAAAGCTCACCCAC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTTGGGCTTCAAGGGGCTaGTCTGGCCTCAGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIWASRG*SGLSPG
Trigger: GCCCGGGCTGAGGCCAGACAAGCCCCTTGAAGCCCA...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGCAGCTGTGGGGAACTaGCGGGCAGGCGCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIAAVGN*RAGAPR
Trigger: CCTTGGAGCGCCTGCCCGCAAGTTCCCCACAGCTGC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGGAACTCTGTAAACTaGGTTCTAGAGAACCGGCGG +
Preference number: 5 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHWNSVN*VLENRR
Trigger: CCGCCGGTTCTCTAGAACCAAGTTTACAGAGTTCCA...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp TCGGGAGATGTTGGTTTCGTAGCTGCACACTTTGCACTGCCAGGATaGCTTGGTCTTGGGCTCTTTATCCCCGACAGAGGTGGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SGDVGFVAAHFALPG*LGLGLFIPDRGGWE
Trigger: CTCCCACCCACCTCTGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCTCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GGGGTAGGGTCAGTAGAACTGTTGGTTTGGTTAGATACAGGTCTCTaGGGTAAGGGGCGGCCTGGACCAGCAGTCTGGACCACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: GVGSVELLVWLDTGL*GKGRPGPAVWTTVV
Trigger: TACCACAGTGGTCCAGACTGCTGGTCCAGGCCGCCCCTTACCTCAGAGACCTGTATCTAACCAAACCAACAGTTCTACTGACCCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GCAGCTGCATCTTCTCCTTGCTGTTGGACTCGAAGTCACAGATGTTaGAGCGCAGGTGAAGTGGGGAGATGGAGCCGTAAGAAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: AAASSPCCWTRSHRC*SAGEVGRWSRKKPH
Trigger: ATGGGGCTTCTTACGGCTCCATCTCCCCACTTCACCTGCGCTGCAACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp TTTCTTCGTGGGCTGAACCCCGGGTGTGCAGCTGCATCTTCTCCTTaGTGTTGGACTCGAAGTCACAGATGTTGCAGCGCAGGTGAAGTG +
Preference number: 5 (lower is better)
Translates to: FLRGLNPGCAAASSP*CWTRSHRCCSAGEV
Trigger: CACTTCACCTGCGCTGCAACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCCACGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GAACTCTGTAAACTTGGTTCTAGAGAACCGGCGGCCCACAGGTACTaGGGGAGGAAGACTCCCTCTAGAGCCTTCTTCTTCCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ELCKLGSREPAAHRY*GRKTPSRAFFFLRG
Trigger: CCCTCTGAGGAAGAAGAAGGCTCTAGAGGGAGTCTTCCTCCCGCAGTACCTGTGGGCCGCCGGTTCTCTAGAACCAAGTTTACAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TATAGGGCCGAGCAGGGTCAAGAAACTTGTCCAGGGCAAAGTTTGTaGTCTTCCGATAGGTTAGAGGGTGGCGGGAGTCAGCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: YRAEQGQETCPGQSL*SSDRLEGGGSQLGL
Trigger: CAACCCCAGCTGACTCCCGCCACCCTCTAACCTATCGGAAGACCACAAACTTTGCCCTGGACAAGTTTCTTGACCCTGCTCGGCCCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCCCCAGGGGGCCATCTTaGGGATCTTCGGTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIPRGPS*GSSVGF
Trigger: AAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGG...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTGTTGTTGCTGGAGCTaGAGTAGTGATTCTGGAACC +
Preference number: 5 (lower is better)
Translates to: LCSCKRRQSVRDQTMAAHCCCWS*SSDSGT
Trigger: GGTTCCAGAATCACTACTCAAGCTCCAGCAACAACA...GTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCAAGAGTTGGGAAGGGTaGCAACTGGCTTTCGCTCAC +
Preference number: 5 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVKSWEG*QLAFAH
Trigger: GTGAGCGAAAGCCAGTTGCAACCCTTCCCAACTCTT...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGTGTGTGAAGCCCACGGAAGGTGGGAATTGACAGACTCCCATGAGGTGGGCCCGTGTGAGGTAATCTaGCTTCCTCTTTGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: GVCEAHGRWELTDSHEVGPCEVI*LPLWQK
Trigger: CTTTTGCCAAAGAGGAAGCAAGATTACCTCACACGG...GCCCACCTCATGGGAGTCTGTCAATTCCCACCTTCCGTGGGCTTCACACACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp CCAGAAGGATCCATCCCTTCTCTCACAGGCAGCCAGAGACGGCGCTaGGGTATCGTGGGACAACATTTGGTCAGAAGAGCTAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PEGSIPSLTGSQRRR*GIVGQHLVRRAKAL
Trigger: CAAGGCTTTAGCTCTTCTGACCAAATGTTGTCCCACGATACCTCAGCGCCGTCTCTGGCTGCCTGTGAGAGAAGGGATGGATCCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp CTCAGAGCCTCAAAGGGCAGAAAGCGGCGGTGGACATGTTCCTCATaGGTCTTGAGGATGAGCATGTTGGAGAAGAGTTTCCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: LRASKGRKRRWTCSS*VLRMSMLEKSFPQA
Trigger: GGCCTGTGGGAAACTCTTCTCCAACATGCTCATCCTCAAGACTCATGAGGAACATGTCCACCGCCGCTTTCTGCCCTTTGAGGCTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp CCCCCAACAGGGCTGGGACAGTGGCTTTCAATGCTTTCAGGTTCTTaGGGGCATCAGTGGAAGAGTTGGGAAGGGTTGCAACTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: PPTGLGQWLSMLSGS*GHQWKSWEGLQLAF
Trigger: GAAAGCCAGTTGCAACCCTTCCCAACTCTTCCACTGATGCCCTCAAGAACCTGAAAGCATTGAAAGCCACTGTCCCAGCCCTGTTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GGATGCGCAGGTTTCGGGAGATGTTGGTTTCGTAGCTGCACACTTTaGACTGCCAGGATGACTTGGTCTTGGGCTCTTTATCCCCGACAG +
Preference number: 5 (lower is better)
Translates to: GCAGFGRCWFRSCTL*TARMTWSWALYPRQ
Trigger: CTGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCTCCCGAAACCTGCGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TCACAGGCAGCCAGAGACGGCGCTGAGGTATCGTGGGACAACATTTaGTCAGAAGAGCTAAAGCCTTGGATTGGGTCGAAGCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: SQAARDGAEVSWDNI*SEELKPWIGSKPCW
Trigger: CCAACATGGCTTCGACCCAATCCAAGGCTTTAGCTCTTCTGACCAAATGTTGTCCCACGATACCTCAGCGCCGTCTCTGGCTGCCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp AGATGTTGGTTTCGTAGCTGCACACTTTGCACTGCCAGGATGACTTaGTCTTGGGCTCTTTATCCCCGACAGAGGTGGGTGGGAGGGATG +
Preference number: 5 (lower is better)
Translates to: RCWFRSCTLCTARMT*SWALYPRQRWVGGM
Trigger: CATCCCTCCCACCCACCTCTGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTCCACCCCAAGGTCCTTaGGTGGGATGTGGCCACAGC +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIAPPQGP*VGCGHS
Trigger: GCTGTGGCCACATCCCACCAAAGGACCTTGGGGTGG...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTATCTTCTCCTTGCTGTaGGACTCGAAGTCACAGATG +
Preference number: 5 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTIFSLL*DSKSQM
Trigger: CATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGAT...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GAACCAACTGGGTTTTTGGAGTTTGTGAGCGGTCTGTGCTCTGGACAAGGGACAGCTACTTGGTCTCTGTaGGGAGTGGGCTCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: EPTGFLEFVSGLCSGQGTATWSL*GVGSAP
Trigger: TGGAGCAGAGCCCACTCCCAACAGAGACCAAGTAGC...TGTCCCTTGTCCAGAGCACAGACCGCTCACAAACTCCAAAAACCCAGTTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp TGTGTAGCTGTAAGAGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTGAGGATGAGCATGTaGGAGAAGAGTTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: CVAVRGARVSGTRPWRLTLRMSM*EKSFPQ
Trigger: CTGTGGGAAACTCTTCTCCAACATGCTCATCCTCAA...AGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCTCTTACAGCTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACAACAGGAGGTTGAATTaGGGGAAGGGAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHNRRLN*GKGAGE
Trigger: CTCCCCAGCTCCCTTCCCCAAATTCAACCTCCTGTT...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCTTGCTCAACAGGAGGTaGAATTTGGGGAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVLLNRR*NLGKGA
Trigger: AGCTCCCTTCCCCAAATTCAACCTCCTGTTGAGCAA...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACCAGGCGAGGCAAGGTaGGGGAAGCCCCCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVPGEAR*GKPPRA
Trigger: TGCCCTTGGGGGCTTCCCCAACCTTGCCTCGCCTGG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTGGTGGTGACCGAACATaGTGCCCAGGGGAAGGAACG +
Preference number: 5 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIGGDRT*CPGEGT
Trigger: CGTTCCTTCCCCTGGGCACAATGTTCGGTCACCACC...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCATCGTGGGACAACATTaGGTCAGAAGAGCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVIVGQH*VRRAKA
Trigger: GGCTTTAGCTCTTCTGACCAAATGTTGTCCCACGAT...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTAGCCCAGGAGCTGACTaGGTGGCAGATGGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIASPGAD*VADGSQ
Trigger: CTGAGACCCATCTGCCACCAAGTCAGCTCCTGGGCT...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCTGTCCAGGGCAAAGTTaGTGGTCTTCCGATAGGTTA +
Preference number: 5 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVCPGQS*WSSDRL
Trigger: TAACCTATCGGAAGACCACAAACTTTGCCCTGGACA...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAGTGGCTGGGCCAGAGTaGGGCCAGGCAAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVVAGPE*GQARGL
Trigger: CAGTCCTCTTGCCTGGCCCAACTCTGGCCCAGCCAC...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCAATGCTTTCAGGTTCTaGAGGGCATCAGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVNAFRF*RASVEE
Trigger: CTCTTCCACTGATGCCCTCAAGAACCTGAAAGCATT...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp GGGTCTGAGGTATCACCGGGTTCATGGGAAATAGCCCCTTCTTCATaGCGTAAAGCTGTTGGAAGTATGCCCCCTGTAACTGAGGACCAA +
Preference number: 5 (lower is better)
Translates to: GSEVSPGSWEIAPSS*RKAVGSMPPVTEDQ
Trigger: TTGGTCCTCAGTTACAGGGGGCATACTTCCAACAGCTTTACGGCATGAAGAAGGGGCTATTTCCCATGAACCCGGTGATACCTCAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAAGGCTGGGCTCTTCCTaGGCGCTTGCCTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTRLGSS*ALASSQ
Trigger: CTGGGATGAGGCAAGCGCCAAGGAAGAGCCCAGCCT...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAGGGGAGAACAAGGGCTaGACCATCTGCCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVGENKG*TICLWG
Trigger: CCCCCAGAGGCAGATGGTCAAGCCCTTGTTCTCCCC...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAAAGAGTTCAGGAGGGTaGGTGGGGGCAGCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVKSSGG*VGAAPG
Trigger: ACCAGGGGCTGCCCCCACCAACCCTCCTGAACTCTT...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCGGTCCAGGAAGCATTTaGGTTGCGAAGGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: QSVRDQTMAAHFSSIVDIGPGSI*VAKVIS
Trigger: AGAGATGACCTTCGCAACCAAAATGCTTCCTGGACC...GATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTTCAGTCTCGCCTTCCTaGAACTCTTCTTGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIASVSPS*NSSWPR
Trigger: GCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGA...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp CATTTCCAGCAGAAACTTATAGATCTGGCTGTTTTCTTCGTGGGCTaGACCCCGGGTGTGCAGCTGCATCTTCTCCTTGCTGTTGGACTC +
Preference number: 5 (lower is better)
Translates to: HFQQKLIDLAVFFVG*TPGVQLHLLLAVGL
Trigger: GAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCCACGAAGAAAACAGCCAGATCTATAAGTTTCTGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 90 bp GGTGAGAGACGGAGTTGTAATGAACCAACAGGATGTTCTTCTGGGTaGAGGACTCCTTACACACAGTGCACTTATAGGGCCGAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GERRSCNEPTGCSSG*RTPYTQCTYRAEQG
Trigger: ACCCTGCTCGGCCCTATAAGTGCACTGTGTGTAAGGAGTCCTTCACCCAGAAGAACATCCTGTTGGTTCATTACAACTCCGTCTCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGCATCAGGGGGATCTTaGGTGACAGGATCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIAASGGS*VTGSEV
Trigger: CACCTCTGATCCTGTCACCAAAGATCCCCCTGATGC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAGGTACTGGCGAATCTTaGGCTTGGGTTGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVGTGES*AWVGLG
Trigger: CCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACC...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTTTTTCTAGAAGGGCTTaGGCTGCTGTGCGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIAFSRRA*AAVRAA
Trigger: AGCTGCCCGCACAGCAGCCAAAGCCCTTCTAGAAAA...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CCAGACCATGGCGGCTCACTTTTCTTCCATTGTCGACATCTGTTAACTGGCATTATCTTCCGTGTGGGGTaGGAGTCCTGCATGTACCAG +
Preference number: 5 (lower is better)
Translates to: PDHGGSLFFHCRHLLTGIIFRVG*ESCMYQ
Trigger: CTGGTACATGCAGGACTCCAACCCCACACGGAAGAT...AATGCCAGTTAACAGATGTCGACAATGGAAGAAAAGTGAGCCGCCATGGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGCTGCAGGGCCTGAATaGAAAGAAGCTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SRQSETCQELWGGRESMGAAGPE*KEAMLP
Trigger: TGGAAGCATAGCTTCTTTCAATTCAGGCCCTGCAGC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGCGCCAGAGTGTCAGGGACCAGACCATGGCGGCTCACTTTTCTTCCATTGTCAGTAGAACTGTTGGTTaGGTTAGATACAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RRQSVRDQTMAAHFSSIVSRTVG*VRYRSL
Trigger: CAGAGACCTGTATCTAACCAAACCAACAGTTCTACT...GACAATGGAAGAAAAGTGAGCCGCCATGGTCTGGTCCCTGACACTCTGGCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTATGCTGGAGGAGGGCATaGGGGAGCAGCCCAATAAGG +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVCWRRA*GSSPIR
Trigger: CCTTATTGGGCTGCTCCCCAATGCCCTCCTCCAGCA...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 90 bp AAGTCATGTGGATGCGCAGGTTTCGGGAGATGTTGGTTTCGTAGCTaGACACTTTGCACTGCCAGGATGACTTGGTCTTGGGCTCTTTAT +
Preference number: 5 (lower is better)
Translates to: KSCGCAGFGRCWFRS*TLCTARMTWSWALY
Trigger: ATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCTCCCGAAACCTGCGCATCCACATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 90 bp TGTGTTTCTCAGAAGTCATGTGGATGCGCAGGTTTCGGGAGATGTTaGTTTCGTAGCTGCACACTTTGCACTGCCAGGATGACTTGGTCT +
Preference number: 5 (lower is better)
Translates to: CVSQKSCGCAGFGRC*FRSCTLCTARMTWS
Trigger: AGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCTCCCGAAACCTGCGCATCCACATGACTTCTGAGAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAAGGTTGGCCAGGTGCTaGTCGGACTGCATGTGGATG +
Preference number: 5 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTRLARC*SDCMWM
Trigger: CATCCACATGCAGTCCGACAAGCACCTGGCCAACCT...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTCAGGATGACTTGGTCTaGGGCTCTTTATCCCCGACA +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIAQDDLV*GSLSPT
Trigger: TGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCTG...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTCACTGCCAGGATGACTaGGTCTTGGGCTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIAHCQDD*VLGSLS
Trigger: GGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTG...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGGACAGAGATCATCTGTACCTTACTAGTCCTGTCTGGGACCTGACACAGCACGGGTCAGTAGAACTGTaGGTTTGGTTAGATACAGGT +
Preference number: 5 (lower is better)
Translates to: GDRDHLYLTSPVWDLTQHGSVEL*VWLDTG
Trigger: ACCTGTATCTAACCAAACCAACAGTTCTACTGACCC...GTGCTGTGTCAGGTCCCAGACAGGACTAGTAAGGTACAGATGATCTCTGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTCAGATGGCCAGAAACTCTCAAACAGGGAAGTGAGGGAACAAACAGTAAAACAGCTCTCCAATCTCCTTaGGTGGGTCAAGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: LRWPETLKQGSEGTNSKTALQSP*VGQGHC
Trigger: GCAGTGACCTTGACCCACCAAAGGAGATTGGAGAGC...TGTTTTACTGTTTGTTCCCTCACTTCCCTGTTTGAGAGTTTCTGGCCATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGGACACTTGAGAGTCTaGCAGGAATTGCGTGAGTGT +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIAGHLRV*QELREC
Trigger: ACACTCACGCAATTCCTGCAAGACTCTCAAGTGTCC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp CTAAGGAATAAAGCTGACCCTTCCCCCATCTCCCTTCTGCACATAAGCATTGCTGCCTGTTGTTCCGTCTaGTTCTGGGCATCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: LRNKADPSPISLLHISIAACCSV*FWASFS
Trigger: TGAGAAAGATGCCCAGAACAAGACGGAACAACAGGC...AGCAATGCTTATGTGCAGAAGGGAGATGGGGGAAGGGTCAGCTTTATTCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGGCGGTACAGTGGGCTaGACTGCTGGACCGGCAACT +
Preference number: 5 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLGGTVG*TAGPAT
Trigger: AGTTGCCGGTCCAGCAGTCAAGCCCACTGTACCGCC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTACTTTGGGATCTTCGGTaGGGTTTGGAACCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVLWDLR*GLEPAG
Trigger: ACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAG...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp TCCAGACAATCAGAAACATGCCAGGAGCTCTGGGGAGGAAGAGAGTCAATGGGAGTTTCGTCTTCAATCTaGCTCAACAGGAGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: SRQSETCQELWGGRESMGVSSSI*LNRRLN
Trigger: ATTCAACCTCCTGTTGAGCAAGATTGAAGACGAAAC...TCCCATTGACTCTCTTCCTCCCCAGAGCTCCTGGCATGTTTCTGATTGTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTAAGCTGCATCTTCTCCTaGCTGTTGGACTCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVSCIFS*LLDSKS
Trigger: TGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCT...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp GGGATTCTCATCTGTCCAGATACATCTTACCTTAGGGGACAGAGATCATCTGTATTCCCTTCAGACTCTTaGCTTTCTGGCCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: GILICPDTSYLRGQRSSVFPSDS*LSGLVG
Trigger: GCCAACAAGGCCAGAAAGCAAAGAGTCTGAAGGGAA...TACAGATGATCTCTGTCCCCTAAGGTAAGATGTATCTGGACAGATGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGGATCTTCGGTTGGGTTaGGAACCAGCTGGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLDLRLG*EPAGSS
Trigger: GGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATC...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS-3UTR CAA 90 bp AGGGGAGAGATGAAATATCTGGAAGTTATAGGAAATTTGGAGGGCTTTTCTTTGATGTGGATGCTGAGGTaGCCTTTGGTGGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RGEMKYLEVIGNLEGFSLMWMLR*PLVVVE
Trigger: CTCCACCACCACCAAAGGCAACCTCAGCATCCACAT...CAAAGAAAAGCCCTCCAAATTTCCTATAACTTCCAGATATTTCATCTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp AGGGCTTGTCTGACGCAGTGGCGGCGGGCGGTGGGATaGCCGCCTCGCCTCGGGCAGGGCCCGATGGGTCAA +
Preference number: 6 (lower is better)
Translates to: RACLTQWRRAVG*PPRLGQGPMGQ
Trigger: TTGACCCATCGGGCCCTGCCCGAGGCGAGGCGGGCATCCCACCGCCCGCCGCCACTGCGTCAGACAAGCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GGATGCCTCCGGGGGACTCGCCTGCCCGCCAGGCCCTaGCTGGAAGCCCTGCAGGTTGGCCAGGTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: GCLRGTRLPARP*LEALQVGQVLV
Trigger: GACAAGCACCTGGCCAACCTGCAGGGCTTCCAGGCAGGGCCTGGCGGGCAGGCGAGTCCCCCGGAGGCATCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GGGCTCTTTATCCCCGACAGAGGTGGGTGGGAGGGATaGCTCCGGGGGACTCGCCTGCCCGCCAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: GLFIPDRGGWEG*LRGTRLPARPC
Trigger: GCAGGGCCTGGCGGGCAGGCGAGTCCCCCGGAGGCATCCCTCCCACCCACCTCTGTCGGGGATAAAGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GACAGTCGGTGCGCTGGGCTGCCGAGGTGCCCTCACTaGTGCCCCCGCTCCCTGGTGGTGCTGTTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: DSRCAGLPRCPH*CPRSLVVLFPA
Trigger: TGCAGGGAACAGCACCACCAGGGAGCGGGGGCAGCAGTGAGGGCACCTCGGCAGCCCAGCGCACCGACTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GGCCAGGCAGTGGTAGGTGCAGATAGGCACCCGCAATaGGGCGGGCATGGAGGCCCCAGAGCCCCGCCCAAA +
Preference number: 6 (lower is better)
Translates to: GQAVVGADRHPQ*GGHGGPRAPPK
Trigger: TTTGGGCGGGGCTCTGGGGCCTCCATGCCCGCCCCATTGCGGGTGCCTATCTGCACCTACCACTGCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GGGCGCCCCCGGCGCTACAGTAGCTGCAGTGGCTGTTaGTCTCGGGGTGCTTCTCCCGCATGTGCACGTCCA +
Preference number: 6 (lower is better)
Translates to: GRPRRYSSCSGC*SRGASPACARP
Trigger: TGGACGTGCACATGCGGGAGAAGCACCCCGAGAGCAACAGCCACTGCAGCTACTGTAGCGCCGGGGGCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp CACTACCACCACGCGGCTAGCCAGACCCAAGAGGCTTaGCAGGCGCTCCACCTCCCCGTCCTTGGGGTAGGC +
Preference number: 6 (lower is better)
Translates to: HYHHAASQTQEA*QALHLPVLGVG
Trigger: GCCTACCCCAAGGACGGGGAGGTGGAGCGCCTGGCAAGCCTCTTGGGTCTGGCTAGCCGCGTGGTGGTAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp CTTAACGTCACAGTAGGGACAGTCGGTGCGCTGGGCTaGCGAGGTGCCCTCACTGCTGCCCCCGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LNVTVGTVGALG*RGALTAAPAPW
Trigger: CCAGGGAGCGGGGGCAGCAGTGAGGGCACCTCGGCAGCCCAGCGCACCGACTGTCCCTACTGTGACGTTAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CTTGGTCTTGGGCTCTTTATCCCCGACAGAGGTGGGTaGGAGGGATGCCTCCGGGGGACTCGCCTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: LGLGLFIPDRGG*EGCLRGTRLPA
Trigger: GGCGGGCAGGCGAGTCCCCCGGAGGCATCCCTCCCACCCACCTCTGTCGGGGATAAAGAGCCCAAGACCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GATGGGTCTCAGGGGAGAGGCTGCCAGGGGCAGCTGTaGGGAACTTGCGGGCAGGCGCTCCAAGGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: DGSQGRGCQGQL*GTCGQALQGGG
Trigger: TCCACCACCTTGGAGCGCCTGCCCGCAAGTTCCCCACAGCTGCCCCTGGCAGCCTCTCCCCTGAGACCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp GGACACTCGGCAGACTGTGCACTTAAAGGGCTTGTCTaGCGCAGTGGCGGCGGGCGGTGGGATGCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: GHSADCALKGLV*RSGGGRWDARL
Trigger: GAGGCGGGCATCCCACCGCCCGCCGCCACTGCGTCAGACAAGCCCTTTAAGTGCACAGTCTGCCGAGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CTGGCCCCGCCTCGCCTCTTGGTACTGGCGAATCTTTaGCTTGGGTTGGGCTGGGGTCCCAGGTGGCTAGGG +
Preference number: 6 (lower is better)
Translates to: LAPPRLLVLANL*LGLGWGPRWLG
Trigger: CCCTAGCCACCTGGGACCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGGCGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp AGCCTGGCACACCAGGCAGCGGAACACCTTCAGGGCTaGGCTGTCATCTGGGGATGGCGAAGTGGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: SLAHQAAEHLQG*AVIWGWRSGQP
Trigger: GGGCTGCCCACTTCGCCATCCCCAGATGACAGCCCAGCCCTGAAGGTGTTCCGCTGCCTGGTGTGCCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GAGAAGGCGGCTGATCAGGGCTTTCTGAGGGCTCCCTaGAGCCCTCGACTGGCGCCAGGGGAGGCTCAAGAG +
Preference number: 6 (lower is better)
Translates to: EKAADQGFLRAP*SPRLAPGEAQE
Trigger: CTCTTGAGCCTCCCCTGGCGCCAGTCGAGGGCTCCAGGGAGCCCTCAGAAAGCCCTGATCAGCCGCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TGGTGGCTGGGCCAGAGTTGGGCCAGGCAAGAGGACTaGAGCCAGGCGAGGCAAGGTTGGGGAAGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: WWLGQSWARQED*SQARQGWGSPQ
Trigger: TTGGGGGCTTCCCCAACCTTGCCTCGCCTGGCTCCAGTCCTCTTGCCTGGCCCAACTCTGGCCCAGCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GGGAACCAGTCTGGCCCCGCCTCGCCTCTTGGTACTGGCGAATCTTaGGCTTGGGTTGGGCTGGGGTCCCAGGTGGCTAGGGCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: GNQSGPASPLGTGES*AWVGLGSQVARAVG
Trigger: ACCCACAGCCCTAGCCACCTGGGACCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGGCGGGGCCAGACTGGTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp CCTCCTTCCATTCGGCCTCCGGCAGGCTCCGGCCAATaGTGCAGTGGTACAGCAGCAGCTCCAGGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PPSIRPPAGSGQ*CSGTAAAPGCL
Trigger: CAGACAGCCTGGAGCTGCTGCTGTACCACTGCAGCATTGGCCGGAGCCTGCCGGAGGCCGAATGGAAGGAGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp AGCGGGCAGGGACAGCATGGGCGTAGGGCTAGCCAGTaGCAGCTTGGGCCCCACCTTGAGGTCATGGAGGTA +
Preference number: 6 (lower is better)
Translates to: SGQGQHGRRASQ*QLGPHLEVMEV
Trigger: TACCTCCATGACCTCAAGGTGGGGCCCAAGCTGGCACTGGCTAGCCCTACGCCCATGCTGTCCCTGCCCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GGCTGCTCATTTGGGTCCGATATCGCCGCTGCCCCATaGTATCTGGAACTCCGGTCCCACCGCCTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: GCSFGSDIAAAP*YLELRSHRLVP
Trigger: GGGGACCAGGCGGTGGGACCGGAGTTCCAGATAGCATGGGGCAGCGGCGATATCGGACCCAAATGAGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCCCTCAGGGAACCAGTCTGGCCCCGCCTCGCCTCTTaGTACTGGCGAATCTTTGGCTTGGGTTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PLREPVWPRLAS*YWRIFGLGWAG
Trigger: CCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGGCGGGGCCAGACTGGTTCCCTGAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp AGGTCCTGGCCCCACCAGCCCTGGTGGCAGGCCAAGTaGCAGCCCCTGGTGCAACATCAGGACGTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: RSWPHQPWWQAK*QPLVQHQDVLH
Trigger: ATGCAGAACGTCCTGATGTTGCACCAGGGGCTGCCACTTGGCCTGCCACCAGGGCTGGTGGGGCCAGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TCTGGCCCCGCCTCGCCTCTTGGTACTGGCGAATCTTaGGCTTGGGTTGGGCTGGGGTCCCAGGTGGCTAGG +
Preference number: 6 (lower is better)
Translates to: SGPASPLGTGES*AWVGLGSQVAR
Trigger: CCTAGCCACCTGGGACCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGGCGGGGCCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp GCCCCTCAGGGAACCAGTCTGGCCCCGCCTCGCCTCTaGGTACTGGCGAATCTTTGGCTTGGGTTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: APQGTSLAPPRL*VLANLWLGLGW
Trigger: CCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGGCGGGGCCAGACTGGTTCCCTGAGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp AGCTGGGCTCGGACTGCCTCCTTGAGCTTGGCAAGGTaGTGCCGAGAGAAGAGGTGGCCTCTGCAGGAGACG +
Preference number: 6 (lower is better)
Translates to: SWARTASLSLAR*CREKRWPLQET
Trigger: CGTCTCCTGCAGAGGCCACCTCTTCTCTCGGCAGCACCTTGCCAAGCTCAAGGAGGCAGTCCGAGCCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp AGGGAACCAGTCTGGCCCCGCCTCGCCTCTTGGTACTaGCGAATCTTTGGCTTGGGTTGGGCTGGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: REPVWPRLASWY*RIFGLGWAGVP
Trigger: TGGGACCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGGCGGGGCCAGACTGGTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp AGTCATCGGCCAGGCGACAGGACGGAGGTGGGTCACTaGTATCTTCGGGAGAGCCTGCTGGAGCTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: SHRPGDRTEVGH*YLRESLLELGA
Trigger: TGCTCCCAGCTCCAGCAGGCTCTCCCGAAGATACCAGTGACCCACCTCCGTCCTGTCGCCTGGCCGATGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CGGTGGGATGCCCGCCTCGCCTCGGGCAGGGCCCGATaGGTCAATGGCTGCCTTCTTCATCTTATGAAGGTG +
Preference number: 6 (lower is better)
Translates to: RWDARLASGRAR*VNGCLLHLMKV
Trigger: CACCTTCATAAGATGAAGAAGGCAGCCATTGACCCATCGGGCCCTGCCCGAGGCGAGGCGGGCATCCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GCCTCGCCCTCAGTCTCGCCTTCCTTGAACTCTTCTTaGCCCCGCTCTGCTCCTTCAGCCCTGGCGTCGATC +
Preference number: 6 (lower is better)
Translates to: ASPSVSPSLNSS*PRSAPSALASI
Trigger: GATCGACGCCAGGGCTGAAGGAGCAGAGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CATTTGGGTCCGATATCGCCGCTGCCCCATGCTATCTaGAACTCCGGTCCCACCGCCTGGTCCCCCACTGGT +
Preference number: 6 (lower is better)
Translates to: HLGPISPLPHAI*NSGPTAWSPTG
Trigger: ACCAGTGGGGGACCAGGCGGTGGGACCGGAGTTCCAGATAGCATGGGGCAGCGGCGATATCGGACCCAAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp CCTCGCCTCTTGGTACTGGCGAATCTTTGGCTTGGGTaGGGCTGGGGTCCCAGGTGGCTAGGGCTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: PRLLVLANLWLG*GWGPRWLGLWV
Trigger: CACCCACAGCCCTAGCCACCTGGGACCCCAGCCCAACCCAAGCCAAAGATTCGCCAGTACCAAGAGGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp CTCAGTACCTGCCTCGCCCTCAGTCTCGCCTTCCTTGAACTCTTCTaGGCCCCGCTCTGCTCCTTCAGCCCTGGCGTCGATCTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: LSTCLALSLAFLELF*APLCSFSPGVDLGP
Trigger: GGGGCCAAGATCGACGCCAGGGCTGAAGGAGCAGAGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCAGGTACTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GGGCCTTTCTTCTCAGTACCTGCCTCGCCCTCAGTCTCGCCTTCCTaGAACTCTTCTTGGCCCCGCTCTGCTCCTTCAGCCCTGGCGTCG +
Preference number: 6 (lower is better)
Translates to: GPFFSVPASPSVSPS*NSSWPRSAPSALAS
Trigger: CGACGCCAGGGCTGAAGGAGCAGAGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCAGGTACTGAGAAGAAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TGCGTGAGTGTAGCAGGGACATGTGACTGGACAGGCTaGGGCCCTGGAAGGCGGCAGGGGCTGGAGTGTAGT +
Preference number: 6 (lower is better)
Translates to: CVSVAGTCDWTG*GPGRRQGLECS
Trigger: ACTACACTCCAGCCCCTGCCGCCTTCCAGGGCCTCAGCCTGTCCAGTCACATGTCCCTGCTACACTCACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp AGCAGCAGCTTCTCGACGCACTCGGGCACCACATTGTaGAGGTGGCTGAGGTGGAAGTGCAAGGCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: SSSFSTHSGTTL*RWLRWKCKAGR
Trigger: CCGGCCTGCCTTGCACTTCCACCTCAGCCACCTTCACAATGTGGTGCCCGAGTGCGTCGAGAAGCTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GAGGAGGAGGTCTCTGGAGGTGGTGACCGAACATTGTaGCCAGGGGAAGGAACGGTTCCGGAGGGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: EEEVSGGGDRTL*PGEGTVPEGEA
Trigger: AGCCTCTCCCTCCGGAACCGTTCCTTCCCCTGGGCACAATGTTCGGTCACCACCTCCAGAGACCTCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp AGCTGCTCCTGGCAGAGTGGGCACCTGTACTTGGGCTaGACGGCATGCTGGGAGAGTGTATGGACCCTCACC +
Preference number: 6 (lower is better)
Translates to: SCSWQSGHLYLG*TACWESVWTLT
Trigger: GGTGAGGGTCCATACACTCTCCCAGCATGCCGTGCAGCCCAAGTACAGGTGCCCACTCTGCCAGGAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCAGAGCCCCGCCCAAAGAAGCAGAAGGATCTCTGGTaGGCAGTAGCTGGGGCCTCGCCGTCAAATGCCATC +
Preference number: 6 (lower is better)
Translates to: PEPRPKKQKDLW*AVAGASPSNAI
Trigger: GATGGCATTTGACGGCGAGGCCCCAGCTACTGCCCACCAGAGATCCTTCTGCTTCTTTGGGCGGGGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp CTGGAGGAGGAGGTCTCTGGAGGTGGTGACCGAACATaGTGCCCAGGGGAAGGAACGGTTCCGGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: LEEEVSGGGDRT*CPGEGTVPEGE
Trigger: CTCTCCCTCCGGAACCGTTCCTTCCCCTGGGCACAATGTTCGGTCACCACCTCCAGAGACCTCCTCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TGCCTCGCCCTCAGTCTCGCCTTCCTTGAACTCTTCTaGGCCCCGCTCTGCTCCTTCAGCCCTGGCGTCGAT +
Preference number: 6 (lower is better)
Translates to: CLALSLAFLELF*APLCSFSPGVD
Trigger: ATCGACGCCAGGGCTGAAGGAGCAGAGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp CCTGTGGGAGACAGACTGCCGTCATCGTGCTTCCGCTaGAGGGGTGTCCCGGTCACTGATGAGGTGCCCGAT +
Preference number: 6 (lower is better)
Translates to: PVGDRLPSSCFR*RGVPVTDEVPD
Trigger: ATCGGGCACCTCATCAGTGACCGGGACACCCCTCAAGCGGAAGCACGATGACGGCAGTCTGTCTCCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GCTTCACTGCCTGTGGGAGACAGACTGCCGTCATCGTGCTTCCGCTaGAGGGGTGTCCCGGTCACTGATGAGGTGCCCGATACTACTGGG +
Preference number: 6 (lower is better)
Translates to: ASLPVGDRLPSSCFR*RGVPVTDEVPDTTG
Trigger: CCCAGTAGTATCGGGCACCTCATCAGTGACCGGGACACCCCTCAAGCGGAAGCACGATGACGGCAGTCTGTCTCCCACAGGCAGTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TCTCAGTACCTGCCTCGCCCTCAGTCTCGCCTTCCTTaGACTCTTCTTGGCCCCGCTCTGCTCCTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: SQYLPRPQSRLP*TLLGPALLLQP
Trigger: GGGCTGAAGGAGCAGAGCGGGGCCAAGAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCAGGTACTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp CTGTGGGAGACAGACTGCCGTCATCGTGCTTCCGCTTaGGGGGTGTCCCGGTCACTGATGAGGTGCCCGATA +
Preference number: 6 (lower is better)
Translates to: LWETDCRHRASA*GVSRSLMRCPI
Trigger: TATCGGGCACCTCATCAGTGACCGGGACACCCCTCAAGCGGAAGCACGATGACGGCAGTCTGTCTCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp TGGCAGAGTGGGCACCTGTACTTGGGCTGCACGGCATaGTGGGAGAGTGTATGGACCCTCACCTGGTCACAC +
Preference number: 6 (lower is better)
Translates to: WQSGHLYLGCTA*WESVWTLTWSH
Trigger: GTGTGACCAGGTGAGGGTCCATACACTCTCCCAGCATGCCGTGCAGCCCAAGTACAGGTGCCCACTCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GCTTCACTGCCTGTGGGAGACAGACTGCCGTCATCGTaGTTCCGCTTGAGGGGTGTCCCGGTCACTGATGAG +
Preference number: 6 (lower is better)
Translates to: ASLPVGDRLPSS*FRLRGVPVTDE
Trigger: CTCATCAGTGACCGGGACACCCCTCAAGCGGAAGCACGATGACGGCAGTCTGTCTCCCACAGGCAGTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp TCTCTGGTGGGCAGTAGCTGGGGCCTCGCCGTCAAATaGCATCTTGCACTGGCGGCACAAGTAGCGGTGAGT +
Preference number: 6 (lower is better)
Translates to: SLVGSSWGLAVK*HLALAAQVAVS
Trigger: ACTCACCGCTACTTGTGCCGCCAGTGCAAGATGGCATTTGACGGCGAGGCCCCAGCTACTGCCCACCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCCACCAGCCCTGGTGGCAGGCCAAGTGGCAGCCCCTaGTGCAACATCAGGACGTTCTGCATGTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: PTSPGGRPSGSP*CNIRTFCMCFS
Trigger: TGAGAAACACATGCAGAACGTCCTGATGTTGCACCAGGGGCTGCCACTTGGCCTGCCACCAGGGCTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GCTGTGGGGAACTTGCGGGCAGGCGCTCCAAGGTGGTaGAAACCATTTAGGAGTAGCTGGGCTTCAAGGGGC +
Preference number: 6 (lower is better)
Translates to: AVGNLRAGAPRW*KPFRSSWASRG
Trigger: GCCCCTTGAAGCCCAGCTACTCCTAAATGGTTTCCACCACCTTGGAGCGCCTGCCCGCAAGTTCCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp AGGGTAGATCTAGGAGCTGGGACGGTGGCGGGGCGCTaGGCTGCACAGATGGTAGCAAATGGAGTCGATGGT +
Preference number: 6 (lower is better)
Translates to: RVDLGAGTVAGR*AAQMVANGVDG
Trigger: ACCATCGACTCCATTTGCTACCATCTGTGCAGCCCAGCGCCCCGCCACCGTCCCAGCTCCTAGATCTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp AGCCTCGCTTTCTGGAGACGCTTTAGATGGTTCCTCTaGACCCTCGTCCTCACTGAGTGCTGGGGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: SLAFWRRFRWFL*TLVLTECWGRE
Trigger: CTCCCGCCCCCAGCACTCAGTGAGGACGAGGGTCCAGAGGAACCATCTAAAGCGTCTCCAGAAAGCGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TGGAAACCATTTAGGAGTAGCTGGGCTTCAAGGGGCTaGTCTGGCCTCAGCCCGGGCCCAGGCATGGGTGTC +
Preference number: 6 (lower is better)
Translates to: WKPFRSSWASRG*SGLSPGPGMGV
Trigger: GACACCCATGCCTGGGCCCGGGCTGAGGCCAGACAAGCCCCTTGAAGCCCAGCTACTCCTAAATGGTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp CCCGTCGGCTCCCCAGGGGGCCATCTTTGGGATCTTCGGTTGGGTTaGGAACCAGCTGGTAGCTCCAGAAGGATCCATCCCTTCTCTCAC +
Preference number: 6 (lower is better)
Translates to: PVGSPGGHLWDLRLG*EPAGSSRRIHPFSH
Trigger: GTGAGAGAAGGGATGGATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGAGCCGACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GGTCTTCCCGTCGGCTCCCCAGGGGGCCATCTTTGGGATCTTCGGTaGGGTTTGGAACCAGCTGGTAGCTCCAGAAGGATCCATCCCTTC +
Preference number: 6 (lower is better)
Translates to: GLPVGSPGGHLWDLR*GLEPAGSSRRIHPF
Trigger: GAAGGGATGGATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGAGCCGACGGGAAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TGCAGTGGTACAGCAGCAGCTCCAGGCTGTCTGTGCTaGAAGCCTGGCACACCAGGCAGCGGAACACCTTCA +
Preference number: 6 (lower is better)
Translates to: CSGTAAAPGCLC*KPGTPGSGTPS
Trigger: TGAAGGTGTTCCGCTGCCTGGTGTGCCAGGCTTTCAGCACAGACAGCCTGGAGCTGCTGCTGTACCACTGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp CCGCCCATGGCTGAAGCTCAGAATACTCTGGAGAGCTaGGAGTCCTTCTTCAGCGGCTGGGCCGTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PPMAEAQNTLES*ESFFSGWAVLQ
Trigger: CTGCAGAACGGCCCAGCCGCTGAAGAAGGACTCTCAGCTCTCCAGAGTATTCTGAGCTTCAGCCATGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp CGCCTCGCCTCGGGCAGGGCCCGATGGGTCAATGGCTaGCTTCTTCATCTTATGAAGGTGAGAGACGGAGTT +
Preference number: 6 (lower is better)
Translates to: RLASGRARWVNG*LLHLMKVRDGV
Trigger: AACTCCGTCTCTCACCTTCATAAGATGAAGAAGGCAGCCATTGACCCATCGGGCCCTGCCCGAGGCGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GTGGGGTCTCGGGTGCGGGAGCTAAGTCATAGCATTTaGTTTCGCTCTTCAGCTGGGCTCGGACTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: VGSRVRELSHSI*FRSSAGLGLPP
Trigger: AGGAGGCAGTCCGAGCCCAGCTGAAGAGCGAAAGCAAATGCTATGACTTAGCTCCCGCACCCGAGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TCCTCCTTTGCCACCCCAAGGTCCTTTGGTGGGATGTaGCCACAGCCAGGCTCTTCTTGGGGCTCTCCAATC +
Preference number: 6 (lower is better)
Translates to: SSFATPRSFGGM*PQPGSSWGSPI
Trigger: GATTGGAGAGCCCCAAGAAGAGCCTGGCTGTGGCCACATCCCACCAAAGGACCTTGGGGTGGCAAAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TCGGCTCCCCAGGGGGCCATCTTTGGGATCTTCGGTTaGGTTTGGAACCAGCTGGTAGCTCCAGAAGGATCC +
Preference number: 6 (lower is better)
Translates to: SAPQGAIFGIFG*VWNQLVAPEGS
Trigger: GGATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGAGCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GCAGCTGTGGGGAACTTGCGGGCAGGCGCTCCAAGGTaGTGGAAACCATTTAGGAGTAGCTGGGCTTCAAGG +
Preference number: 6 (lower is better)
Translates to: AAVGNLRAGAPR*WKPFRSSWASR
Trigger: CCTTGAAGCCCAGCTACTCCTAAATGGTTTCCACCACCTTGGAGCGCCTGCCCGCAAGTTCCCCACAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GGACTCGAAGTCACAGATGTTGCAGCGCAGGTGAAGTaGGGAGATGGAGCCGTAAGAAGCCCCATCCCCCAG +
Preference number: 6 (lower is better)
Translates to: GLEVTDVAAQVK*GDGAVRSPIPQ
Trigger: CTGGGGGATGGGGCTTCTTACGGCTCCATCTCCCCACTTCACCTGCGCTGCAACATCTGTGACTTCGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CTGTACTTGGGCTGCACGGCATGCTGGGAGAGTGTATaGACCCTCACCTGGTCACACTCTGGGCTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LYLGCTACWESV*TLTWSHSGLRK
Trigger: CTTCCTGAGCCCAGAGTGTGACCAGGTGAGGGTCCATACACTCTCCCAGCATGCCGTGCAGCCCAAGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CAGAGTGGGCACCTGTACTTGGGCTGCACGGCATGCTaGGAGAGTGTATGGACCCTCACCTGGTCACACTCT +
Preference number: 6 (lower is better)
Translates to: QSGHLYLGCTAC*ESVWTLTWSHS
Trigger: AGAGTGTGACCAGGTGAGGGTCCATACACTCTCCCAGCATGCCGTGCAGCCCAAGTACAGGTGCCCACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TTGGCTGCTGTGCGGGCAGCTTCATTGGGTGATGTGTaGGTTGGTGAAGAAGGCCCCGCTTCAGTCCCCTCT +
Preference number: 6 (lower is better)
Translates to: LAAVRAASLGDV*VGEEGPASVPS
Trigger: AGAGGGGACTGAAGCGGGGCCTTCTTCACCAACCCACACATCACCCAATGAAGCTGCCCGCACAGCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCAAGAGGCTTGCCAGGCGCTCCACCTCCCCGTCCTTaGGGTAGGCACTGGTCTCAAAGAAAGACTGTAGAG +
Preference number: 6 (lower is better)
Translates to: PRGLPGAPPPRP*GRHWSQRKTVE
Trigger: CTCTACAGTCTTTCTTTGAGACCAGTGCCTACCCCAAGGACGGGGAGGTGGAGCGCCTGGCAAGCCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CTTGCTCAACAGGAGGTTGAATTTGGGGAAGGGAGCTaGGGAGGGCGGTACAGTGGGCTTGACTGCTGGACC +
Preference number: 6 (lower is better)
Translates to: LAQQEVEFGEGS*GGRYSGLDCWT
Trigger: GGTCCAGCAGTCAAGCCCACTGTACCGCCCTCCCCAGCTCCCTTCCCCAAATTCAACCTCCTGTTGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp ACTGGCGGCACAAGTAGCGGTGAGTCACATCCACGGTaGAGATGCCAGTGCTGCCTGTCAGCAGCTCATCAG +
Preference number: 6 (lower is better)
Translates to: TGGTSSGESHPR*RCQCCLSAAHQ
Trigger: CTGATGAGCTGCTGACAGGCAGCACTGGCATCTCCACCGTGGATGTGACTCACCGCTACTTGTGCCGCCAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCCAAAGAAGCAGAAGGATCTCTGGTGGGCAGTAGCTaGGGCCTCGCCGTCAAATGCCATCTTGCACTGGCG +
Preference number: 6 (lower is better)
Translates to: PKEAEGSLVGSS*GLAVKCHLALA
Trigger: CGCCAGTGCAAGATGGCATTTGACGGCGAGGCCCCAGCTACTGCCCACCAGAGATCCTTCTGCTTCTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp GTCGGCTCCCCAGGGGGCCATCTTTGGGATCTTCGGTaGGGTTTGGAACCAGCTGGTAGCTCCAGAAGGATC +
Preference number: 6 (lower is better)
Translates to: VGSPGGHLWDLR*GLEPAGSSRRI
Trigger: GATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGAGCCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp CTGCTGTGCGGGCAGCTTCATTGGGTGATGTGTGGGTaGGTGAAGAAGGCCCCGCTTCAGTCCCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LLCGQLHWVMCG*VKKAPLQSPLQ
Trigger: CTGAAGAGGGGACTGAAGCGGGGCCTTCTTCACCAACCCACACATCACCCAATGAAGCTGCCCGCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TTGCTTTCGCTCTTCAGCTGGGCTCGGACTGCCTCCTaGAGCTTGGCAAGGTGCTGCCGAGAGAAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LLSLFSWARTAS*SLARCCREKRW
Trigger: CCACCTCTTCTCTCGGCAGCACCTTGCCAAGCTCAAGGAGGCAGTCCGAGCCCAGCTGAAGAGCGAAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp AGAAGCGGCACACTGGTCACAGGCATAGACGGGAGGTaGGGGCGGTGCCTTCCCTTCAGACTCTTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: RSGTLVTGIDGR*GRCLPFRLFAF
Trigger: GAAAGCAAAGAGTCTGAAGGGAAGGCACCGCCCTCACCTCCCGTCTATGCCTGTGACCAGTGTGCCGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TGCAACTGGCTTTCGCTCACCAGAGACTTTGTCTCCTaGGGGCTCAGTAGCTGGGCCAGGGGTAGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: CNWLSLTRDFVS*GLSSWARGRVS
Trigger: ACTGACCCTACCCCTGGCCCAGCTACTGAGCCCTCAGGAGACAAAGTCTCTGGTGAGCGAAAGCCAGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GGGCTGAACCCCGGGTGTGCAGCTGCATCTTCTCCTTaGTGTTGGACTCGAAGTCACAGATGTTGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: GLNPGCAAASSP*CWTRSHRCCSA
Trigger: TGCGCTGCAACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GCACAACAGGCAGTGGTAAAGCCCGGGCTCCGGCCCTaGCTCTGCTCCCTCCATTTCCAGCAGAAACTTATA +
Preference number: 6 (lower is better)
Translates to: AQQAVVKPGLRP*LCSLHFQQKLI
Trigger: TATAAGTTTCTGCTGGAAATGGAGGGAGCAGAGGCAGGGCCGGAGCCCGGGCTTTACCACTGCCTGTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GAAGCCACCAGGGTCAGGGCCTTTCTTCTCAGTACCTaGCTCGCCCTCAGTCTCGCCTTCCTTGAACTCTTC +
Preference number: 6 (lower is better)
Translates to: EATRVRAFLLST*LALSLAFLELF
Trigger: GAAGAGTTCAAGGAAGGCGAGACTGAGGGCGAGGCAGGTACTGAGAAGAAAGGCCCTGACCCTGGTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GAGTCCTGCATGTACCAGCGGTACAGGATCTCCAGCTaGTCAGGCAGGATGGTAGTGCGCAGGCGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: ESCMYQRYRISS*SGRMVVRRRLS
Trigger: AGACAAACGCCTGCGCACTACCATCCTGCCTGAGCAGCTGGAGATCCTGTACCGCTGGTACATGCAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCCCAGGGGGCCATCTTTGGGATCTTCGGTTGGGTTTaGAACCAGCTGGTAGCTCCAGAAGGATCCATCCCT +
Preference number: 6 (lower is better)
Translates to: PQGAIFGIFGWV*NQLVAPEGSIP
Trigger: AGGGATGGATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TCAGACATGGTGGGTAGAGGAGCCAATTCTTCAACCTaGGCATCAAGCCGAGGGGCTGGAGATGGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: SDMVGRGANSST*ASSRGAGDGAG
Trigger: TCCAGCCCCATCTCCAGCCCCTCGGCTTGATGCCCAGGTTGAAGAATTGGCTCCTCTACCCACCATGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TCACAGGCATTTTTACGGGCTTTCTGGCGGGCATTCTaGAACCACACTACCACCACGCGGCTAGCCAGACCC +
Preference number: 6 (lower is better)
Translates to: SQAFLRAFWRAF*NHTTTTRLARP
Trigger: GGGTCTGGCTAGCCGCGTGGTGGTAGTGTGGTTCCAGAATGCCCGCCAGAAAGCCCGTAAAAATGCCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GCTGCACAGATGGTAGCAAATGGAGTCGATGGTGAGTaGTCAGGAGGTCCTGGCTGGGGAAAGAAGCGGCAC +
Preference number: 6 (lower is better)
Translates to: AAQMVANGVDGE*SGGPGWGKKRH
Trigger: GTGCCGCTTCTTTCCCCAGCCAGGACCTCCTGACCACTCACCATCGACTCCATTTGCTACCATCTGTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp CACAGCCAGGCTCTTCTTGGGGCTCTCCAATCTCCTTaGGTGGGTCAAGGTCACTGCCTGACTCCAGACGCT +
Preference number: 6 (lower is better)
Translates to: HSQALLGALQSP*VGQGHCLTPDA
Trigger: AGCGTCTGGAGTCAGGCAGTGACCTTGACCCACCAAAGGAGATTGGAGAGCCCCAAGAAGAGCCTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TCCCCAGGGGGCCATCTTTGGGATCTTCGGTTGGGTTaGGAACCAGCTGGTAGCTCCAGAAGGATCCATCCC +
Preference number: 6 (lower is better)
Translates to: SPGGHLWDLRLG*EPAGSSRRIHP
Trigger: GGGATGGATCCTTCTGGAGCTACCAGCTGGTTCCAAACCCAACCGAAGATCCCAAAGATGGCCCCCTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TGGGCTGAACCCCGGGTGTGCAGCTGCATCTTCTCCTaGCTGTTGGACTCGAAGTCACAGATGTTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: WAEPRVCSCIFS*LLDSKSQMLQR
Trigger: GCGCTGCAACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp GCTGACTTCTGGGGCCAGGTTAGAGCTTTCTGCTACTaGGTCTCTGTTGGGAGTGGGCTCTGCTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: ADFWGQVRAFCY*VSVGSGLCSRS
Trigger: GCTCCTGGAGCAGAGCCCACTCCCAACAGAGACCAAGTAGCAGAAAGCTCTAACCTGGCCCCAGAAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp GGAAGGGTTGCAACTGGCTTTCGCTCACCAGAGACTTaGTCTCCTGAGGGCTCAGTAGCTGGGCCAGGGGTA +
Preference number: 6 (lower is better)
Translates to: GRVATGFRSPET*SPEGSVAGPGV
Trigger: TACCCCTGGCCCAGCTACTGAGCCCTCAGGAGACAAAGTCTCTGGTGAGCGAAAGCCAGTTGCAACCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GAAGAGTTGGGAAGGGTTGCAACTGGCTTTCGCTCACCAGAGACTTaGTCTCCTGAGGGCTCAGTAGCTGGGCCAGGGGTAGGGTCAGTA +
Preference number: 6 (lower is better)
Translates to: EELGRVATGFRSPET*SPEGSVAGPGVGSV
Trigger: TACTGACCCTACCCCTGGCCCAGCTACTGAGCCCTCAGGAGACAAAGTCTCTGGTGAGCGAAAGCCAGTTGCAACCCTTCCCAACTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp GGCTCAGCTTCACTCCATGAGAAAGTGTGTGACCTATaGAGGTCTGGAGCCTGCCGAAACCCAGGCGGCAGA +
Preference number: 6 (lower is better)
Translates to: GSASLHEKVCDL*RSGACRNPGGR
Trigger: TCTGCCGCCTGGGTTTCGGCAGGCTCCAGACCTTCATAGGTCACACACTTTCTCATGGAGTGAAGCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TGGAGGAGGGCATTGGGGAGCAGCCCAATAAGGGTCTaGGGTATCACCGGGTTCATGGGAAATAGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: WRRALGSSPIRV*GITGFMGNSPF
Trigger: GAAGGGGCTATTTCCCATGAACCCGGTGATACCTCAGACCCTTATTGGGCTGCTCCCCAATGCCCTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp ATCTGGGCTGACTTCTGGGGCCAGGTTAGAGCTTTCTaGTACTTGGTCTCTGTTGGGAGTGGGCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: IWADFWGQVRAF*YLVSVGSGLCS
Trigger: GGAGCAGAGCCCACTCCCAACAGAGACCAAGTAGCAGAAAGCTCTAACCTGGCCCCAGAAGTCAGCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CTGGGAGAGTGTATGGACCCTCACCTGGTCACACTCTaGGCTCAGGAAGCTACAGTAGGGACAGCAGAAGAC +
Preference number: 6 (lower is better)
Translates to: LGECMDPHLVTL*AQEATVGTAED
Trigger: GTCTTCTGCTGTCCCTACTGTAGCTTCCTGAGCCCAGAGTGTGACCAGGTGAGGGTCCATACACTCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CTGACTTCTGGGGCCAGGTTAGAGCTTTCTGCTACTTaGTCTCTGTTGGGAGTGGGCTCTGCTCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LTSGARLELSAT*SLLGVGSAPGA
Trigger: AGCTCCTGGAGCAGAGCCCACTCCCAACAGAGACCAAGTAGCAGAAAGCTCTAACCTGGCCCCAGAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CAGGGGAGGCTCAAGAGGAGGATCTGGGCTGACTTCTaGGGCCAGGTTAGAGCTTTCTGCTACTTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: QGRLKRRIWADF*GQVRAFCYLVS
Trigger: AGAGACCAAGTAGCAGAAAGCTCTAACCTGGCCCCAGAAGTCAGCCCAGATCCTCCTCTTGAGCCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TGGACTGCAAGCCTCGCTTTCTGGAGACGCTTTAGATaGTTCCTCTGGACCCTCGTCCTCACTGAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: WTASLAFWRRFR*FLWTLVLTECW
Trigger: CCAGCACTCAGTGAGGACGAGGGTCCAGAGGAACCATCTAAAGCGTCTCCAGAAAGCGAGGCTTGCAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp ATCTCTGGGAGGGCCGCTTCTGTCCTCTGTCACTTCGGAAGCCTGTaGTTCCGTCTTGTTCTGGGCATCTTTCTCAGAGGTGGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: ISGRAASVLCHFGSL*FRLVLGIFLRGGWL
Trigger: CAACCACCCACCTCTGAGAAAGATGCCCAGAACAAGACGGAACAACAGGCTTCCGAAGTGACAGAGGACAGAAGCGGCCCTCCCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GAGGTGAGGGCGGTGCCTTCCCTTCAGACTCTTTGCTTTCTGGCCTaGTTGGCTCCGTTTGGCTCAAGTCTTCCCCATCTGCATGTTCTG +
Preference number: 6 (lower is better)
Translates to: EVRAVPSLQTLCFLA*LAPFGSSLPHLHVL
Trigger: CAGAACATGCAGATGGGGAAGACTTGAGCCAAACGGAGCCAACAAGGCCAGAAAGCAAAGAGTCTGAAGGGAAGGCACCGCCCTCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp AGTCCCACTTCCTCAGAGATACAGTCGAGCATCTTCCGTGTGGGGTaGGAGTCCTGCATGTACCAGCGGTACAGGATCTCCAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SPTSSEIQSSIFRVG*ESCMYQRYRISSCS
Trigger: TGAGCAGCTGGAGATCCTGTACCGCTGGTACATGCAGGACTCCAACCCCACACGGAAGATGCTCGACTGTATCTCTGAGGAAGTGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TCCATCCCTTCTCTCACAGGCAGCCAGAGACGGCGCTaGGGTATCGTGGGACAACATTTGGTCAGAAGAGCT +
Preference number: 6 (lower is better)
Translates to: SIPSLTGSQRRR*GIVGQHLVRRA
Trigger: AGCTCTTCTGACCAAATGTTGTCCCACGATACCTCAGCGCCGTCTCTGGCTGCCTGTGAGAGAAGGGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp CTGTTTTCTTCGTGGGCTGAACCCCGGGTGTGCAGCTaGATCTTCTCCTTGCTGTTGGACTCGAAGTCACAG +
Preference number: 6 (lower is better)
Translates to: LFSSWAEPRVCS*IFSLLLDSKSQ
Trigger: CTGTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCCACGAAGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp ATCTGGCTGTTTTCTTCGTGGGCTGAACCCCGGGTGTaGAGCTGCATCTTCTCCTTGCTGTTGGACTCGAAG +
Preference number: 6 (lower is better)
Translates to: IWLFSSWAEPRV*SCIFSLLLDSK
Trigger: CTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCCACGAAGAAAACAGCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp ATACAGTCGAGCATCTTCCGTGTGGGGTTGGAGTCCTaGATGTACCAGCGGTACAGGATCTCCAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: IQSSIFRVGLES*MYQRYRISSCS
Trigger: TGAGCAGCTGGAGATCCTGTACCGCTGGTACATGCAGGACTCCAACCCCACACGGAAGATGCTCGACTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp AGTAGCGGTGAGTCACATCCACGGTGGAGATGCCAGTaGTGCCTGTCAGCAGCTCATCAGCCTCACTACTTT +
Preference number: 6 (lower is better)
Translates to: SSGESHPRWRCQ*CLSAAHQPHYF
Trigger: AAAGTAGTGAGGCTGATGAGCTGCTGACAGGCAGCACTGGCATCTCCACCGTGGATGTGACTCACCGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CTCTCACAGGCAGCCAGAGACGGCGCTGAGGTATCGTaGGACAACATTTGGTCAGAAGAGCTAAAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: LSQAARDGAEVS*DNIWSEELKPW
Trigger: CCAAGGCTTTAGCTCTTCTGACCAAATGTTGTCCCACGATACCTCAGCGCCGTCTCTGGCTGCCTGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp AACCCCGGGTGTGCAGCTGCATCTTCTCCTTGCTGTTaGACTCGAAGTCACAGATGTTGCAGCGCAGGTGAA +
Preference number: 6 (lower is better)
Translates to: NPGCAAASSPCC*TRSHRCCSAGE
Trigger: TTCACCTGCGCTGCAACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGATGCAGCTGCACACCCGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCTCAGAGATACAGTCGAGCATCTTCCGTGTGGGGTTaGAGTCCTGCATGTACCAGCGGTACAGGATCTCCA +
Preference number: 6 (lower is better)
Translates to: PQRYSRASSVWG*SPACTSGTGSP
Trigger: TGGAGATCCTGTACCGCTGGTACATGCAGGACTCCAACCCCACACGGAAGATGCTCGACTGTATCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CCACTTCCTCAGAGATACAGTCGAGCATCTTCCGTGTaGGGTTGGAGTCCTGCATGTACCAGCGGTACAGGA +
Preference number: 6 (lower is better)
Translates to: PLPQRYSRASSV*GWSPACTSGTG
Trigger: TCCTGTACCGCTGGTACATGCAGGACTCCAACCCCACACGGAAGATGCTCGACTGTATCTCTGAGGAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GACTGTGGGGTAGGGAAAGGCAGGTGCGTCTCTCTTTaGGGCTTCCTTCCCCGTTTCGTCTTCAATCTTGCT +
Preference number: 6 (lower is better)
Translates to: DCGVGKGRCVSL*GFLPRFVFNLA
Trigger: AGCAAGATTGAAGACGAAACGGGGAAGGAAGCCCCAAAGAGAGACGCACCTGCCTTTCCCTACCCCACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp GCGGTGCCTTCCCTTCAGACTCTTTGCTTTCTGGCCTaGTTGGCTCCGTTTGGCTCAAGTCTTCCCCATCTG +
Preference number: 6 (lower is better)
Translates to: AVPSLQTLCFLA*LAPFGSSLPHL
Trigger: CAGATGGGGAAGACTTGAGCCAAACGGAGCCAACAAGGCCAGAAAGCAAAGAGTCTGAAGGGAAGGCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TCCTCAGAGATACAGTCGAGCATCTTCCGTGTGGGGTaGGAGTCCTGCATGTACCAGCGGTACAGGATCTCC +
Preference number: 6 (lower is better)
Translates to: SSEIQSSIFRVG*ESCMYQRYRIS
Trigger: GGAGATCCTGTACCGCTGGTACATGCAGGACTCCAACCCCACACGGAAGATGCTCGACTGTATCTCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp GCAGGCTTTCATGATCTTCAGCTGAAGGCTGCTCATTaGGGTCCGATATCGCCGCTGCCCCATGCTATCTGG +
Preference number: 6 (lower is better)
Translates to: AGFHDLQLKAAH*GPISPLPHAIW
Trigger: CCAGATAGCATGGGGCAGCGGCGATATCGGACCCAAATGAGCAGCCTTCAGCTGAAGATCATGAAAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp ATGTGGGTCCAGGAAGCATTTTGGTTGCGAAGGTCATCTCTACAGTaGTGGCCACAAGCAGCAGCTTCTCGACGCACTCGGGCACCACAT +
Preference number: 6 (lower is better)
Translates to: MWVQEAFWLRRSSLQ*WPQAAASRRTRAPH
Trigger: ATGTGGTGCCCGAGTGCGTCGAGAAGCTGCTGCTTGTGGCCACAACTGTAGAGATGACCTTCGCAACCAAAATGCTTCCTGGACCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GGCTTCATAGCAGGCTTTCATGATCTTCAGCTGAAGGCTGCTCATTaGGGTCCGATATCGCCGCTGCCCCATGCTATCTGGAACTCCGGT +
Preference number: 6 (lower is better)
Translates to: GFIAGFHDLQLKAAH*GPISPLPHAIWNSG
Trigger: ACCGGAGTTCCAGATAGCATGGGGCAGCGGCGATATCGGACCCAAATGAGCAGCCTTCAGCTGAAGATCATGAAAGCCTGCTATGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp CTAAAGCCTTGGATTGGGTCGAAGCCATGTTGGATGTaGAGGGTGGTAAGGTGTGAGGAGGGGAAGTGGGTG +
Preference number: 6 (lower is better)
Translates to: LKPWIGSKPCWM*RVVRCEEGKWV
Trigger: CACCCACTTCCCCTCCTCACACCTTACCACCCTTCACATCCAACATGGCTTCGACCCAATCCAAGGCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp CAGAAGCCTTCCCAGGAGTTTGAAGCCGCCCATGGCTaGAGCTCAGAATACTCTGGAGAGCTGAGAGTCCTT +
Preference number: 6 (lower is better)
Translates to: QKPSQEFEAAHG*SSEYSGELRVL
Trigger: AAGGACTCTCAGCTCTCCAGAGTATTCTGAGCTTCAGCCATGGGCGGCTTCAAACTCCTGGGAAGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp GTCTTGTTCTGGGCATCTTTCTCAGAGGTGGGTGGTTaGGCTAAGGGGGTGTCAGAAGCCTTCCCAGGAGTT +
Preference number: 6 (lower is better)
Translates to: VLFWASFSEVGG*AKGVSEAFPGV
Trigger: AACTCCTGGGAAGGCTTCTGACACCCCCTTAGCTCAACCACCCACCTCTGAGAAAGATGCCCAGAACAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TCAGTAGAACTGTTGGTTTGGTTAGATACAGGTCTCTaGGGTAAGGGGCGGCCTGGACCAGCAGTCTGGACC +
Preference number: 6 (lower is better)
Translates to: SVELLVWLDTGL*GKGRPGPAVWT
Trigger: GGTCCAGACTGCTGGTCCAGGCCGCCCCTTACCTCAGAGACCTGTATCTAACCAAACCAACAGTTCTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GGATGCGCAGGTTTCGGGAGATGTTGGTTTCGTAGCTaGACACTTTGCACTGCCAGGATGACTTGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: GCAGFGRCWFRS*TLCTARMTWSW
Trigger: CCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCTCCCGAAACCTGCGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp TCTTCTCCTTGCTGTTGGACTCGAAGTCACAGATGTTaGAGCGCAGGTGAAGTGGGGAGATGGAGCCGTAAG +
Preference number: 6 (lower is better)
Translates to: SSPCCWTRSHRC*SAGEVGRWSRK
Trigger: CTTACGGCTCCATCTCCCCACTTCACCTGCGCTGCAACATCTGTGACTTCGAGTCCAACAGCAAGGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GCCAGAGACGGCGCTGAGGTATCGTGGGACAACATTTaGTCAGAAGAGCTAAAGCCTTGGATTGGGTCGAAG +
Preference number: 6 (lower is better)
Translates to: ARDGAEVSWDNI*SEELKPWIGSK
Trigger: CTTCGACCCAATCCAAGGCTTTAGCTCTTCTGACCAAATGTTGTCCCACGATACCTCAGCGCCGTCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp AGGGCCGCTTCTGTCCTCTGTCACTTCGGAAGCCTGTaGTTCCGTCTTGTTCTGGGCATCTTTCTCAGAGGT +
Preference number: 6 (lower is better)
Translates to: RAASVLCHFGSL*FRLVLGIFLRG
Trigger: ACCTCTGAGAAAGATGCCCAGAACAAGACGGAACAACAGGCTTCCGAAGTGACAGAGGACAGAAGCGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp CAGGAAGCATTTTGGTTGCGAAGGTCATCTCTACAGTaGTGGCCACAAGCAGCAGCTTCTCGACGCACTCGG +
Preference number: 6 (lower is better)
Translates to: QEAFWLRRSSLQ*WPQAAASRRTR
Trigger: CCGAGTGCGTCGAGAAGCTGCTGCTTGTGGCCACAACTGTAGAGATGACCTTCGCAACCAAAATGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp AAAGACTGTAGAGCCTGGGTCTGGAACTCTGTAAACTaGGTTCTAGAGAACCGGCGGCCCACAGGTACTGCG +
Preference number: 6 (lower is better)
Translates to: KDCRAWVWNSVN*VLENRRPTGTA
Trigger: CGCAGTACCTGTGGGCCGCCGGTTCTCTAGAACCAAGTTTACAGAGTTCCAGACCCAGGCTCTACAGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp GTTGGTTTCGTAGCTGCACACTTTGCACTGCCAGGATaGCTTGGTCTTGGGCTCTTTATCCCCGACAGAGGT +
Preference number: 6 (lower is better)
Translates to: VGFVAAHFALPG*LGLGLFIPDRG
Trigger: ACCTCTGTCGGGGATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GTTCTTGAGGGCATCAGTGGAAGAGTTGGGAAGGGTTaGAACTGGCTTTCGCTCACCAGAGACTTTGTCTCC +
Preference number: 6 (lower is better)
Translates to: VLEGISGRVGKG*NWLSLTRDFVS
Trigger: GGAGACAAAGTCTCTGGTGAGCGAAAGCCAGTTGCAACCCTTCCCAACTCTTCCACTGATGCCCTCAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp CAGAAGTCATGTGGATGCGCAGGTTTCGGGAGATGTTaGTTTCGTAGCTGCACACTTTGCACTGCCAGGATG +
Preference number: 6 (lower is better)
Translates to: QKSCGCAGFGRC*FRSCTLCTARM
Trigger: CATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCTCCCGAAACCTGCGCATCCACATGACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TCTGGTGCAGAACTGATCGCATGTGAATCTCCAGTGTaGAGCTCTGGTTATAGGACACTCGGCAGACTGTGC +
Preference number: 6 (lower is better)
Translates to: SGAELIACESPV*SSGYRTLGRLC
Trigger: GCACAGTCTGCCGAGTGTCCTATAACCAGAGCTCCACACTGGAGATTCACATGCGATCAGTTCTGCACCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GGCCATCCTCCACAGGGTTTAATGTGGGTCCAGGAAGCATTTTGGTaGCGAAGGTCATCTCTACAGTTGTGGCCACAAGCAGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: GHPPQGLMWVQEAFW*RRSSLQLWPQAAAS
Trigger: AGAAGCTGCTGCTTGTGGCCACAACTGTAGAGATGACCTTCGCAACCAAAATGCTTCCTGGACCCACATTAAACCCTGTGGAGGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp TCTAGGCCATCCTCCACAGGGTTTAATGTGGGTCCAGGAAGCATTTaGGTTGCGAAGGTCATCTCTACAGTTGTGGCCACAAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SRPSSTGFNVGPGSI*VAKVISTVVATSSS
Trigger: GCTGCTGCTTGTGGCCACAACTGTAGAGATGACCTTCGCAACCAAAATGCTTCCTGGACCCACATTAAACCCTGTGGAGGATGGCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp CAGAAACTTATAGATCTGGCTGTTTTCTTCGTGGGCTaGACCCCGGGTGTGCAGCTGCATCTTCTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: QKLIDLAVFFVG*TPGVQLHLLLA
Trigger: AGCAAGGAGAAGATGCAGCTGCACACCCGGGGTTCAGCCCACGAAGAAAACAGCCAGATCTATAAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp GCACTGGTCTCAAAGAAAGACTGTAGAGCCTGGGTCTaGAACTCTGTAAACTTGGTTCTAGAGAACCGGCGG +
Preference number: 6 (lower is better)
Translates to: ALVSKKDCRAWV*NSVNLVLENRR
Trigger: CCGCCGGTTCTCTAGAACCAAGTTTACAGAGTTCCAGACCCAGGCTCTACAGTCTTTCTTTGAGACCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 90 bp GTGGCTTTCAATGCTTTCAGGTTCTTGAGGGCATCAGTGGAAGAGTaGGGAAGGGTTGCAACTGGCTTTCGCTCACCAGAGACTTTGTCT +
Preference number: 6 (lower is better)
Translates to: VAFNAFRFLRASVEE*GRVATGFRSPETLS
Trigger: AGACAAAGTCTCTGGTGAGCGAAAGCCAGTTGCAACCCTTCCCAACTCTTCCACTGATGCCCTCAAGAACCTGAAAGCATTGAAAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp TCAAAGGGCAGAAAGCGGCGGTGGACATGTTCCTCATaGGTCTTGAGGATGAGCATGTTGGAGAAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: SKGRKRRWTCSS*VLRMSMLEKSF
Trigger: GAAACTCTTCTCCAACATGCTCATCCTCAAGACTCATGAGGAACATGTCCACCGCCGCTTTCTGCCCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GGTTTCGGGAGATGTTGGTTTCGTAGCTGCACACTTTaGACTGCCAGGATGACTTGGTCTTGGGCTCTTTAT +
Preference number: 6 (lower is better)
Translates to: GFGRCWFRSCTL*TARMTWSWALY
Trigger: ATAAAGAGCCCAAGACCAAGTCATCCTGGCAGTGCAAAGTGTGCAGCTACGAAACCAACATCTCCCGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS GCA 72 bp GTATCACCGGGTTCATGGGAAATAGCCCCTTCTTCATaGCGTAAAGCTGTTGGAAGTATGCCCCCTGTAACT +
Preference number: 6 (lower is better)
Translates to: VSPGSWEIAPSS*RKAVGSMPPVT
Trigger: AGTTACAGGGGGCATACTTCCAACAGCTTTACGGCATGAAGAAGGGGCTATTTCCCATGAACCCGGTGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CCA 72 bp TCAGACTCTTTGCTTTCTGGCCTTGTTGGCTCCGTTTaGCTCAAGTCTTCCCCATCTGCATGTTCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: SDSLLSGLVGSV*LKSSPSACSGD
Trigger: ATCACCAGAACATGCAGATGGGGAAGACTTGAGCCAAACGGAGCCAACAAGGCCAGAAAGCAAAGAGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp CCACAGGGTTTAATGTGGGTCCAGGAAGCATTTTGGTaGCGAAGGTCATCTCTACAGTTGTGGCCACAAGCA +
Preference number: 6 (lower is better)
Translates to: PQGLMWVQEAFW*RRSSLQLWPQA
Trigger: TGCTTGTGGCCACAACTGTAGAGATGACCTTCGCAACCAAAATGCTTCCTGGACCCACATTAAACCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp TCCTCCACAGGGTTTAATGTGGGTCCAGGAAGCATTTaGGTTGCGAAGGTCATCTCTACAGTTGTGGCCACA +
Preference number: 6 (lower is better)
Translates to: SSTGFNVGPGSI*VAKVISTVVAT
Trigger: TGTGGCCACAACTGTAGAGATGACCTTCGCAACCAAAATGCTTCCTGGACCCACATTAAACCCTGTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS TCA 72 bp CGGAGTTGTAATGAACCAACAGGATGTTCTTCTGGGTaGAGGACTCCTTACACACAGTGCACTTATAGGGCC +
Preference number: 6 (lower is better)
Translates to: RSCNEPTGCSSG*RTPYTQCTYRA
Trigger: GGCCCTATAAGTGCACTGTGTGTAAGGAGTCCTTCACCCAGAAGAACATCCTGTTGGTTCATTACAACTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9
CDS CAA 72 bp ATCGTGGGACAACATTTGGTCAGAAGAGCTAAAGCCTaGGATTGGGTCGAAGCCATGTTGGATGTGAAGGGT +
Preference number: 6 (lower is better)
Translates to: IVGQHLVRRAKA*DWVEAMLDVKG
Trigger: ACCCTTCACATCCAACATGGCTTCGACCCAATCCAAGGCTTTAGCTCTTCTGACCAAATGTTGTCCCACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036328.9