Pregenerated sensors for ZFAND5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024750Ensembl transcript IDs: ENSMUST00000025659.12, ENSMUST00000237651.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACTGTGCAGCTCAGCCTGGCCTGGGACTCATATAAACCAAGATaGCCTCAAACAGACAAGAGATCTGCCTACTGTCTCCCAAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LTVQLSLAWDSYKPR*PQTDKRSAYCLPSA Trigger: AGCACTTGGGAGACAGTAGGCAGATCTCTTGTCTGTTTGAGGCCATCTTGGTTTATATGAGTCCCAGGCCAGGCTGAGCTGCACAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR TCA 90 bp | AGTGAGGCATGGCAGCTCACATCTGTAACTCAACACTTAAAATGCTaGTGGTGGGAGTCTAAGACAGCCTGGCTGTTACAACTACAGTTG | + |
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Preference number: 1 (lower is better) Translates to: SEAWQLTSVTQHLKC*WWESKTAWLLQLQL Trigger: CAACTGTAGTTGTAACAGCCAGGCTGTCTTAGACTCCCACCATCAGCATTTTAAGTGTTGAGTTACAGATGTGAGCTGCCATGCCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 90 bp | AGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAAGAAGTCTACTaGAGCCATGTTGGTTATGATTTTCCATGCAGAAGGGTACAGTTA | + |
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Preference number: 1 (lower is better) Translates to: SSPLQVVLDTTKEVY*SHVGYDFPCRRVQL Trigger: TAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR GCA 90 bp | ACACTAGAGTCCTACACCCAAGTACAATATGATAAAGCAGCCCTCTaGAAGTGGTGCTGGATACCACTAAAGAAGTCTACTGCAGCCATG | + |
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Preference number: 1 (lower is better) Translates to: TLESYTQVQYDKAAL*KWCWIPLKKSTAAM Trigger: CATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGACTCTAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR CCA 90 bp | GAGTCCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAAGAAGTCTACTGCAGCCATGTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: ESYTQVQYDKAALCK*CWIPLKKSTAAMLV Trigger: AACCAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR GCA 90 bp | TCCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTaGTGGATACCACTAAAGAAGTCTACTGCAGCCATGTTGGTTATG | + |
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Preference number: 1 (lower is better) Translates to: SYTQVQYDKAALCKW*WIPLKKSTAAMLVM Trigger: CATAACCAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR CCA 90 bp | TACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTaGATACCACTAAAGAAGTCTACTGCAGCCATGTTGGTTATGATT | + |
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Preference number: 1 (lower is better) Translates to: YTQVQYDKAALCKWC*IPLKKSTAAMLVMI Trigger: AATCATAACCAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR TCA 90 bp | GACTTAGAACCAGTTGTGATGTTACCTTTCGCAGAATGTCCTAATTaGCAGCTTTTAGAAGACCAATTTAACCAGGCTCACACATGGTAC | + |
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Preference number: 1 (lower is better) Translates to: DLEPVVMLPFAECPN*QLLEDQFNQAHTWY Trigger: GTACCATGTGTGAGCCTGGTTAAATTGGTCTTCTAAAAGCTGTCAATTAGGACATTCTGCGAAAGGTAACATCACAACTGGTTCTAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR TCA 90 bp | TCATATGCCACACTTAAGATTCATGACCAGCTCATGGCATTCCCATaGCTGAACTCAAGAATGATCATGCAAAACAACTGCAATACAAAG | + |
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Preference number: 1 (lower is better) Translates to: SYATLKIHDQLMAFP*LNSRMIMQNNCNTK Trigger: CTTTGTATTGCAGTTGTTTTGCATGATCATTCTTGAGTTCAGTCATGGGAATGCCATGAGCTGGTCATGAATCTTAAGTGTGGCATATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR TCA 90 bp | TCACTCTCTGCCCCAAAATATGATTATACAATCACTATTGTATACTaGAGCGTTCACACACTGAGGAGAGAGCAAGAGTCTACCATTAAC | + |
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Preference number: 1 (lower is better) Translates to: SLSAPKYDYTITIVY*SVHTLRREQESTIN Trigger: GTTAATGGTAGACTCTTGCTCTCTCCTCAGTGTGTGAACGCTTCAGTATACAATAGTGATTGTATAATCATATTTTGGGGCAGAGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 90 bp | TTAGGACCACTTCATATTAATGGTGCCTACTCACTCTTCAAAATTTaGCTATCATATGCCACACTTAAGATTCATGACCAGCTCATGGCA | + |
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Preference number: 1 (lower is better) Translates to: LGPLHINGAYSLFKI*LSYATLKIHDQLMA Trigger: TGCCATGAGCTGGTCATGAATCTTAAGTGTGGCATATGATAGGCAAATTTTGAAGAGTGAGTAGGCACCATTAATATGAAGTGGTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR TCA 90 bp | AAACAGACAAGAGATCTGCCTACTGTCTCCCAAGTGCTGGGATACTaGTATGACTTTGGATATACTGGGCTAAGTAAAAATACACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: KQTRDLPTVSQVLGY*YDFGYTGLSKNTQK Trigger: TTTTTGTGTATTTTTACTTAGCCCAGTATATCCAAAGTCATATCAGTATCCCAGCACTTGGGAGACAGTAGGCAGATCTCTTGTCTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 90 bp | TTTAGGTGGTCTGGAGCATTTAATATTTCATCTAAGCACAATACCTaGATTGAATTAGGTTTTCTCCTCTCTACATCATATCCAAAACCC | + |
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Preference number: 1 (lower is better) Translates to: FRWSGAFNISSKHNT*IELGFLLSTSYPKP Trigger: GGGTTTTGGATATGATGTAGAGAGGAGAAAACCTAATTCAATGCAGGTATTGTGCTTAGATGAAATATTAAATGCTCCAGACCACCTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR CCA 90 bp | AAGGCAGATATGCTGCAAACATGCAGAGATTTCATTCCTTTAGTTTaGCACGTGGAACTAAATTTTGTTCCTAGTATATGTGTATTTCAA | + |
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Preference number: 1 (lower is better) Translates to: KADMLQTCRDFIPLV*HVELNFVPSICVFQ Trigger: TTGAAATACACATATACTAGGAACAAAATTTAGTTCCACGTGCCAAACTAAAGGAATGAAATCTCTGCATGTTTGCAGCATATCTGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGGTGGGGCTTCCTCGAGAAATACCATTCTGGTGAAGTACTTTTCTCATCGGGCCCTCTGCAAGTGGTaGTGGATACCACTAAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LGGASSRNTILVKYFSHRALCKW*WIPLKK Trigger: CTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGC...CCGATGAGAAAAGTACTTCACCAGAATGGTATTTCTCGAGGAAGCCCCACCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTGGGGCTTCCTCGAGAAATACCATTCTGGTGAAGTACTTTTCTCATCGGCTCTGCAAGTGGTGCTaGATACCACTAAAGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LGGASSRNTILVKYFSHRLCKWC*IPLKKS Trigger: AGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAG...CCGATGAGAAAAGTACTTCACCAGAATGGTATTTCTCGAGGAAGCCCCACCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCCCTAGGGTAAGCAAATTCCCACCATTTCTAAGTTTTGCTTCAACACACCCAGACAAGCATCAGTaGAGTATACCGCCTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LFPRVSKFPPFLSFASTHPDKHQ*SIPPFL Trigger: TAGAAAAGGCGGTATACTTCACTGATGCTTGTCTGG...GTGTGTTGAAGCAAAACTTAGAAATGGTGGGAATTTGCTTACCCTAGGGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTTTTACACAGCAGGAACACCAGTTATAATGCAGGCTGCCTGCTAATTACAGCATCAAGCATTTGTTaGCACCTGTGGACAGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: YVLHSRNTSYNAGCLLITASSIC*HLWTVV Trigger: GACTACTGTCCACAGGTGTCAACAAATGCTTGATGC...TGTAATTAGCAGGCAGCCTGCATTATAACTGGTGTTCCTGCTGTGTAAAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR CAA 90 bp | TGCAAGTGGTGCTGGATACCACTAAAGAAGTCTACTGCAGCCATGTaGGTTATGATTTTCCATGCAGAAGGGTACAGTTACATTAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: CKWCWIPLKKSTAAM*VMIFHAEGYSYIKN Trigger: GTTCTTAATGTAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTTTTACACAGCAGGAACACCAGTTATAATGCAGGCTGCCTGCTAATTACATTGAGAAATTCAGTTTaGGCCAGTGCTGACACACAC | + |
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Preference number: 2 (lower is better) Translates to: YVLHSRNTSYNAGCLLITLRNSV*ASADTH Trigger: GTGTGTGTCAGCACTGGCTCAAACTGAATTTCTCAA...TGTAATTAGCAGGCAGCCTGCATTATAACTGGTGTTCCTGCTGTGTAAAACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCATGCAGAAGGGTACAGTTAACTATGGTAGTAGACTaGCAGTCCTTTTCTGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: EVYCSHVGYDFPCRRVQLTMVVD*QSFSGV Trigger: TACACCAGAAAAGGACTGGCAGTCTACTACCATAGT...TAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCACACATGGTACCAAATACCAGTTTTGTAGCTTTCTTCCTGCTTCCAAAATTTGTCCAATTTTACTaGGGGGAGGGCATATACATT | + |
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Preference number: 2 (lower is better) Translates to: GSHMVPNTSFVAFFLLPKFVQFY*GEGIYI Trigger: AATGTATATGCCCTCCCCTCAGTAAAATTGGACAAA...TTTTGGAAGCAGGAAGAAAGCTACAAAACTGGTATTTGGTACCATGTGTGAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTTTTACACAGCAGGAACACCAGTTATAATGCAGGCTGCCTGCTAATTACAATAACTTTAGGACTCTaGAAGCTAAGGCAGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: YVLHSRNTSYNAGCLLITITLGL*KLRQDH Trigger: GTGATCCTGCCTTAGCTTGCAGAGTCCTAAAGTTAT...TGTAATTAGCAGGCAGCCTGCATTATAACTGGTGTTCCTGCTGTGTAAAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | AGATATGCTGCAAACATGCAGAGATTTCATTCCTTTAGTTTGGCACGTGGAACTTTTGTCCAATTTTACTaGGGGGAGGGCATATACATT | + |
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Preference number: 2 (lower is better) Translates to: RYAANMQRFHSFSLARGTFVQFY*GEGIYI Trigger: AATGTATATGCCCTCCCCTCAGTAAAATTGGACAAA...AGTTCCACGTGCCAAACTAAAGGAATGAAATCTCTGCATGTTTGCAGCATATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCACACATGGTACCAAATACCAGTTTTGTAGCTTTCTTCCTGCTTCCAAAACCAAAGATTATACCTTaGTTACATTCCCAAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GSHMVPNTSFVAFFLLPKPKIIP*LHSQKA Trigger: TGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGG...TTTTGGAAGCAGGAAGAAAGCTACAAAACTGGTATTTGGTACCATGTGTGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCATGCAGAAGGGTACAGTTACCAAAGATTATACCTTaGTTACATTCCCAAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: EVYCSHVGYDFPCRRVQLPKIIP*LHSQKA Trigger: TGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGG...TAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTTTTACACAGCAGGAACACCAGTTATAATGCAGGCTGCCTGCTAATTACAGCAGAATGTCCTAATTaGCAGCTTTTAGAAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: YVLHSRNTSYNAGCLLITAECPN*QLLEDQ Trigger: TTGGTCTTCTAAAAGCTGTCAATTAGGACATTCTGC...TGTAATTAGCAGGCAGCCTGCATTATAACTGGTGTTCCTGCTGTGTAAAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTTTTACACAGCAGGAACACCAGTTATAATGCAGGCTGCCTGCTAATTACATTGCTAACCATTCACTaGTTTAGAAGCCCAAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: YVLHSRNTSYNAGCLLITLLTIH*FRSPSF Trigger: AAAGCTTGGGCTTCTAAAGCAGTGAATGGTTAGCAA...TGTAATTAGCAGGCAGCCTGCATTATAACTGGTGTTCCTGCTGTGTAAAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCACACATGGTACCAAATACCAGTTTTGTAGCTTTCTTCCTGCTTCCAAAAAACATCAAAGGAAAATaGCCATGCATCTGCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: GSHMVPNTSFVAFFLLPKNIKGK*PCICSL Trigger: TAAAGAGCAGATGCATGGCCATTTTCCTTTGATGTT...TTTTGGAAGCAGGAAGAAAGCTACAAAACTGGTATTTGGTACCATGTGTGAGCC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCAAGCATTGTCATCACCTATATGTTTGAATCAATCTTTAGTGATGGAGGAATACAACAAACCAGGCTaGCTTGAAACTTGCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PQALSSPICLNQSLVMEEYNKPG*LETCCH Trigger: ATGGCAGCAAGTTTCAAGCCAGCCTGGTTTGTTGTA...TTCCTCCATCACTAAAGATTGATTCAAACATATAGGTGATGACAATGCTTGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTTTTACACAGCAGGAACACCAGTTATAATGCAGGCTGCCTGCTAATTACAGATATGCTGCAAACATaGAGAGATTTCATTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: YVLHSRNTSYNAGCLLITDMLQT*RDFIPL Trigger: TAAAGGAATGAAATCTCTGCATGTTTGCAGCATATC...TGTAATTAGCAGGCAGCCTGCATTATAACTGGTGTTCCTGCTGTGTAAAACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACAACATCAAAGGAAAATaGCCATGCATCTGCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: LAKDYTLITFPKGRYAANNIKGK*PCICSL Trigger: TAAAGAGCAGATGCATGGCCATTTTCCTTTGATGTT...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCGATATGCTGCAAACATaGAGAGATTTCATTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: YRHITLAKDYTLITFPKGDMLQT*RDFIPL Trigger: TAAAGGAATGAAATCTCTGCATGTTTGCAGCATATC...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTATTCTCCCTGGTGAACGTTCCTGACAAATTATGTAAAGCCAAATCCTGTGAATCACATTATTTCTaGTCTAAAGTCACCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: KLFSLVNVPDKLCKAKSCESHYF*SKVTSE Trigger: TTCAGAGGTGACTTTAGAGCAGAAATAATGTGATTC...ACAGGATTTGGCTTTACATAATTTGTCAGGAACGTTCACCAGGGAGAATAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR CCA 72 bp | CAGCTCAGCCTGGCCTGGGACTCATATAAACCAAGATaGCCTCAAACAGACAAGAGATCTGCCTACTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QLSLAWDSYKPR*PQTDKRSAYCL Trigger: GAGACAGTAGGCAGATCTCTTGTCTGTTTGAGGCCATCTTGGTTTATATGAGTCCCAGGCCAGGCTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR TCA 72 bp | TGGGTTTTACACACAGGCTGCTTGAGAAATTCAGTTTaGGCCAGTGCTGACACACACACACACTCGGAGACT | + |
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Preference number: 3 (lower is better) Translates to: WVLHTGCLRNSV*ASADTHTHSET Trigger: AGTCTCCGAGTGTGTGTGTGTGTCAGCACTGGCTCAAACTGAATTTCTCAAGCAGCCTGTGTGTAAAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | GCTTCCTACAACAAACCAGGCTGGCTTGAAACTTGCTaGCATCCTCATTCTGGAGTGCAGGAATTAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: ASYNKPGWLETC*HPHSGVQELEG Trigger: ACCTTCTAATTCCTGCACTCCAGAATGAGGATGGCAGCAAGTTTCAAGCCAGCCTGGTTTGTTGTAGGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR CCA 72 bp | CCCCAAATCATAAAGGCTTCCTACAACAAACCAGGCTaGCTTGAAACTTGCTGCCATCCTCATTCTGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: PQIIKASYNKPG*LETCCHPHSGV Trigger: CACTCCAGAATGAGGATGGCAGCAAGTTTCAAGCCAGCCTGGTTTGTTGTAGGAAGCCTTTATGATTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGGTGGGGCTTCCTCGAGAAATACCATTCTGGTGAAGTACTTTTCTCATCGGACACACTCGGAGACTTaGATTAACAGTTCCTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: LGGASSRNTILVKYFSHRTHSET*INSSCP Trigger: AGGGCAGGAACTGTTAATCAAAGTCTCCGAGTGTGT...CCGATGAGAAAAGTACTTCACCAGAATGGTATTTCTCGAGGAAGCCCCACCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGGTGGGGCTTCCTCGAGAAATACCATTCTGGTGAAGTACTTTTCTCATCGGAGCATCAAGCATTTGTaGACACCTGTGGACAGTAGT | + |
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Preference number: 3 (lower is better) Translates to: LGGASSRNTILVKYFSHRSIKHL*TPVDSS Trigger: ACTACTGTCCACAGGTGTCAACAAATGCTTGATGCT...CCGATGAGAAAAGTACTTCACCAGAATGGTATTTCTCGAGGAAGCCCCACCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR TCA 72 bp | CCTGGCTGTTACAACTACAGTTGGCAGTCTCAAACATaGTTACCACCAGTTCAAGACCAGCCTAGGGTACAA | + |
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Preference number: 3 (lower is better) Translates to: PGCYNYSWQSQT*LPPVQDQPRVQ Trigger: TTGTACCCTAGGCTGGTCTTGAACTGGTGGTAATCATGTTTGAGACTGCCAACTGTAGTTGTAACAGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | AAGGCTTCCTACAACAAACCAGGCTGGCTTGAAACTTaGTGCCATCCTCATTCTGGAGTGCAGGAATTAGAA | + |
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Preference number: 3 (lower is better) Translates to: KASYNKPGWLET*CHPHSGVQELE Trigger: TTCTAATTCCTGCACTCCAGAATGAGGATGGCAGCAAGTTTCAAGCCAGCCTGGTTTGTTGTAGGAAGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR CCA 72 bp | ACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAAGAAGTCTACTGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: TQVQYDKAALCK*CWIPLKKSTAA Trigger: GGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | CTGCAAGTGGTGCTGGATACCACTAAAGAAGTCTACTaGAGCCATGTTGGTTATGATTTTCCATGCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LQVVLDTTKEVY*SHVGYDFPCRR Trigger: CCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | CAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTaGTGGATACCACTAAAGAAGTCTACTGCAGCCATG | + |
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Preference number: 3 (lower is better) Translates to: QVQYDKAALCKW*WIPLKKSTAAM Trigger: CATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | TCAAACAGACAAGAGATCTGCCTACTGTCTCCCAAGTaGTGGGATACTGATATGACTTTGGATATACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: SNRQEICLLSPK*WDTDMTLDILG Trigger: GCCCAGTATATCCAAAGTCATATCAGTATCCCAGCACTTGGGAGACAGTAGGCAGATCTCTTGTCTGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR CCA 72 bp | GTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTaGATACCACTAAAGAAGTCTACTGCAGCCATGTTG | + |
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Preference number: 3 (lower is better) Translates to: VQYDKAALCKWC*IPLKKSTAAML Trigger: CAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCAAACATGATTACCACCAGTTCAAGACCAGCCTAGGGTACAAAGGGAGTTCTACTGCAGCCATGTaGGTTATGATTTTCCATGCA | + |
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Preference number: 3 (lower is better) Translates to: SLKHDYHQFKTSLGYKGSSTAAM*VMIFHA Trigger: TGCATGGAAAATCATAACCAACATGGCTGCAGTAGA...ACTCCCTTTGTACCCTAGGCTGGTCTTGAACTGGTGGTAATCATGTTTGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGGTGGGGCTTCCTCGAGAAATACCATTCTGGTGAAGTACTTTTCTCATCGGCTCACTCTTCAAAATTaGCCTATCATATGCCACACT | + |
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Preference number: 3 (lower is better) Translates to: LGGASSRNTILVKYFSHRLTLQN*PIICHT Trigger: AGTGTGGCATATGATAGGCAAATTTTGAAGAGTGAG...CCGATGAGAAAAGTACTTCACCAGAATGGTATTTCTCGAGGAAGCCCCACCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR TCA 72 bp | GACAGCCATGAGTATATGTGGACCCTGCCTCAAACCTaGCATGTGAAGAATGCATCTCTTCTAAAAAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: DSHEYMWTLPQT*HVKNASLLKRS Trigger: GCTTCTTTTTAGAAGAGATGCATTCTTCACATGTCAGGTTTGAGGCAGGGTCCACATATACTCATGGCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | TCCTACACCCAAGTACAATATGATAAAGCAGCCCTCTaGAAGTGGTGCTGGATACCACTAAAGAAGTCTACT | + |
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Preference number: 3 (lower is better) Translates to: SYTQVQYDKAAL*KWCWIPLKKST Trigger: AGTAGACTTCTTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | ACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTTGTTGTGCATATTTTaGTCCAATTTTACTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: TPKYNMIKQPSASGAGYHLLCIF*SNFTEG Trigger: CCCCTCAGTAAAATTGGACAAAAATATGCACAACAA...GTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCAAGCATTGTCATCACCTATATGTTTGAATCAATCTTTAGTGATGGAGGAAACAAACCAGGCTGGCTaGAAACTTGCTGCCATCCTC | + |
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Preference number: 3 (lower is better) Translates to: PQALSSPICLNQSLVMEETNQAG*KLAAIL Trigger: GAGGATGGCAGCAAGTTTCAAGCCAGCCTGGTTTGT...TTCCTCCATCACTAAAGATTGATTCAAACATATAGGTGATGACAATGCTTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR TCA 72 bp | AAGTGCTTTCTTGATATTCCTGAATTAGGTGTTATCTaGAGCAGGGCAGTGTGGTTTAGGATCCTTAGCACC | + |
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Preference number: 3 (lower is better) Translates to: KCFLDIPELGVI*SRAVWFRILST Trigger: GGTGCTAAGGATCCTAAACCACACTGCCCTGCTTCAGATAACACCTAATTCAGGAATATCAAGAAAGCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR CCA 72 bp | TTATTTTTAGGTAAAATCTCACTGTGCAGCTCAGCCTaGCCTGGGACTCATATAAACCAAGATGGCCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LFLGKISLCSSA*PGTHINQDGLK Trigger: TTTGAGGCCATCTTGGTTTATATGAGTCCCAGGCCAGGCTGAGCTGCACAGTGAGATTTTACCTAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR TCA 72 bp | CCAGTTGTGATGTTACCTTTCGCAGAATGTCCTAATTaGCAGCTTTTAGAAGACCAATTTAACCAGGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: PVVMLPFAECPN*QLLEDQFNQAH Trigger: GTGAGCCTGGTTAAATTGGTCTTCTAAAAGCTGTCAATTAGGACATTCTGCGAAAGGTAACATCACAACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR TCA 72 bp | AGAGATCTGCCTACTGTCTCCCAAGTGCTGGGATACTaGTATGACTTTGGATATACTGGGCTAAGTAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: RDLPTVSQVLGY*YDFGYTGLSKN Trigger: ATTTTTACTTAGCCCAGTATATCCAAAGTCATATCAGTATCCCAGCACTTGGGAGACAGTAGGCAGATCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | TCCCACACGACACTCAAAAGAGCACTTCCTTTAGCATaGATGAGACTTTTGGTTCAGTCCAACAAACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SHTTLKRALPLA*MRLLVQSNKQK Trigger: TTTTTGTTTGTTGGACTGAACCAAAAGTCTCATGCATGCTAAAGGAAGTGCTCTTTTGAGTGTCGTGTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCATGCAGAAGGGTACAGTTAGCCAAAGATTATACCTaGATTACATTCCCAAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EVYCSHVGYDFPCRRVQLAKDYT*ITFPKG Trigger: GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGC...TAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTCACACATGGTACCAAATACCAGTTTTGTAGCTTTCTTCCTGCTTCCAAAATTGTTGTGCATATTTTaGTCCAATTTTACTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GSHMVPNTSFVAFFLLPKLLCIF*SNFTEG Trigger: CCCCTCAGTAAAATTGGACAAAAATATGCACAACAA...TTTTGGAAGCAGGAAGAAAGCTACAAAACTGGTATTTGGTACCATGTGTGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR CCA 72 bp | AATTTTCTTCAGCTTGGTACTAATAAGTATCTCATGTaGCCCGCACCTTTAATTCCAGCACTCACCATTCTA | + |
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Preference number: 3 (lower is better) Translates to: NFLQLGTNKYLM*PAPLIPALTIL Trigger: TAGAATGGTGAGTGCTGGAATTAAAGGTGCGGGCCACATGAGATACTTATTAGTACCAAGCTGAAGAAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| 3UTR GCA 72 bp | GTTTTACACAGCAGGAACACCAGTTATAATGCAGGCTaGCTGCTAATTACAGATCTCAATTTATTAAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: VLHSRNTSYNAG*LLITDLNLLSN Trigger: GTTACTTAATAAATTGAGATCTGTAATTAGCAGGCAGCCTGCATTATAACTGGTGTTCCTGCTGTGTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237651.2 |
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| CDS-3UTR TCA 90 bp | GGCTCACACATGGTACCAAATACCAGTTTTGTAGCTTTCTTCCTGCTTCCAAAAATGGACTGGGCTGAGTaGCAACTGGCTCTGACACCT | + |
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Preference number: 4 (lower is better) Translates to: GSHMVPNTSFVAFFLLPKMDWAE*QLALTP Trigger: AGGTGTCAGAGCCAGTTGTCACTCAGCCCAGTCCAT...TTTTGGAAGCAGGAAGAAAGCTACAAAACTGGTATTTGGTACCATGTGTGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| CDS-3UTR CCA 90 bp | ACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACCACTTTGAGAAGAACTaGGCTGAGAAACTGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: TPKYNMIKQPSASGAGYHHFEKN*AEKLMD Trigger: GTCCATCAGTTTCTCAGCCCAGTTCTTCTCAAAGTG...GTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| CDS-3UTR CCA 90 bp | GAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCATGCAGAAGGGTACAGTTACACTTTGAGAAGAACTaGGCTGAGAAACTGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: EVYCSHVGYDFPCRRVQLHFEKN*AEKLMD Trigger: GTCCATCAGTTTCTCAGCCCAGTTCTTCTCAAAGTG...TAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR CAA 72 bp | TGCTGGATACCACTAAAGAAGTCTACTGCAGCCATGTaGGTTATGATTTTCCATGCAGAAGGGTACAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: CWIPLKKSTAAM*VMIFHAEGYSY Trigger: GTAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTTAGTGGTATCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| 3UTR CAA 72 bp | AAGTACAGGCACATAACACTAGCCAAAGATTATACCTaGATTACATTCCCAAAAGGCAGATATGCTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: KYRHITLAKDYT*ITFPKGRYAAN Trigger: GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| CDS-3UTR CAA 90 bp | GGCTCACACATGGTACCAAATACCAGTTTTGTAGCTTTCTTCCTGCTTCCAAAACCACAGGCACATTTCTaGATTTTTCAGATGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GSHMVPNTSFVAFFLLPKPQAHF*IFQMCC Trigger: GCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGG...TTTTGGAAGCAGGAAGAAAGCTACAAAACTGGTATTTGGTACCATGTGTGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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| CDS-3UTR CAA 90 bp | AGATATGCTGCAAACATGCAGAGATTTCATTCCTTTAGTTTGGCACGTGGAACTCCACAGGCACATTTCTaGATTTTTCAGATGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RYAANMQRFHSFSLARGTPQAHF*IFQMCC Trigger: GCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGG...AGTTCCACGTGCCAAACTAAAGGAATGAAATCTCTGCATGTTTGCAGCATATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025659.12 ENSMUST00000237651.2 |
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