Pregenerated sensors for ZFAND3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044477Ensembl transcript IDs: ENSMUST00000057897.10, ENSMUST00000226208.3, ENSMUST00000234671.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGGTGCAGGCCTCAGCCCCAGGGCTGTCACAAGCAACGCCAGTaGCCTTGGCAAGCTACAGCCAGAGCCAGTGGGGTCACGACCACG | + |
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Preference number: 1 (lower is better) Translates to: PRCRPQPQGCHKQRQ*PWQATARASGVTTT Trigger: CGTGGTCGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGCTGAGGCCTGCACCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 90 bp | GGTGGGTGCCTGGCTGTCCTCAAACTATGGCTGCATAGAAACACATaGAGGCAAGGGATGGCAGCAGCGGCTCCCCTGTGCGCTCACCCC | + |
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Preference number: 1 (lower is better) Translates to: GGCLAVLKLWLHRNT*RQGMAAAAPLCAHP Trigger: GGGGTGAGCGCACAGGGGAGCCGCTGCTGCCATCCCTTGCCTCCATGTGTTTCTATGCAGCCATAGTTTGAGGACAGCCAGGCACCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 90 bp | CGCGTGGCCATCAGGTCCTGCTGGGACCAAGCGAAAGTGAAGAGGTaGAAGGCCGACCACGGAAGAGTTTCTGTCAAAGCTGCCAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: RVAIRSCWDQAKVKR*KADHGRVSVKAASV Trigger: CACGCTGGCAGCTTTGACAGAAACTCTTCCGTGGTCGGCCTTTCACCTCTTCACTTTCGCTTGGTCCCAGCAGGACCTGATGGCCACGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 90 bp | GCCAGCGTGGGCGTCGAGGCCCGCGCCTCCTTTACTGACTCAGCCTaGTCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCA | + |
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Preference number: 1 (lower is better) Translates to: ASVGVEARASFTDSA*SGHFPLKAFVSLTP Trigger: TGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGACCAGGCTGAGTCAGTAAAGGAGGCGCGGGCCTCGACGCCCACGCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 90 bp | TCACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCCAGTaGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATT | + |
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Preference number: 1 (lower is better) Translates to: SQATPVPLASYSQSQ*GHDHGSCAEEVGII Trigger: AATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 90 bp | ACAGAGGGAAGTCACTGGGCTAAACCGTTCATCAGCAGCCAGACGTaGGCAGCTCCATGCCAAGCCACAATCTGGGACAGGTGGCACCTG | + |
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Preference number: 1 (lower is better) Translates to: TEGSHWAKPFISSQT*AAPCQATIWDRWHL Trigger: CAGGTGCCACCTGTCCCAGATTGTGGCTTGGCATGGAGCTGCCCACGTCTGGCTGCTGATGAACGGTTTAGCCCAGTGACTTCCCTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 90 bp | CCAAGGCACGCGTGGCCATCAGGTCCTGCTGGGACCAAGCGAAAGTaGAGAGGTGAAAGGCCGACCACGGAAGAGTTTCTGTCAAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PRHAWPSGPAGTKRK*RGERPTTEEFLSKL Trigger: CAGCTTTGACAGAAACTCTTCCGTGGTCGGCCTTTCACCTCTTCACTTTCGCTTGGTCCCAGCAGGACCTGATGGCCACGCGTGCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 90 bp | CCACCACACACACCAGGTCCCGTACAGTCCACTGTCTTCCCTTCCTaGACTTGTCCTGAGGTGGGTGCCTGGCTGTCCTCAAACTATGGC | + |
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Preference number: 1 (lower is better) Translates to: PPHTPGPVQSTVFPS*TCPEVGAWLSSNYG Trigger: GCCATAGTTTGAGGACAGCCAGGCACCCACCTCAGGACAAGTTCAGGAAGGGAAGACAGTGGACTGTACGGGACCTGGTGTGTGTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 90 bp | CTACAGTACCAGGACGGCTGGCTAAAGAAAGGAAACGGCCGGCTGTaGTCTGACGCGTGCCCAGTACAAGGTGTCTGGCTGACTTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LQYQDGWLKKGNGRL*SDACPVQGVWLTLS Trigger: GGACAAAGTCAGCCAGACACCTTGTACTGGGCACGCGTCAGACCACAGCCGGCCGTTTCCTTTCTTTAGCCAGCCGTCCTGGTACTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR GCA 90 bp | GCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGCCAAGGCCCAGGTaGAGGCCTCAGCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: AFQTPKKEIWLPRPR*RPQPQGCHKQRQCP Trigger: AGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGCTGAGGCCTGCACCTGGGCCTTGGCAACCAGATTTCTTTCTTTGGAGTTTGAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 90 bp | GTACCAGGACGGCTGGCTAAAGAAAGGAAACGGCCGGCTGTGGTCTaGCGCGTGCCCAGTACAAGGTGTCTGGCTGACTTTGTCCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: VPGRLAKERKRPAVV*RVPSTRCLADFVLN Trigger: ATTTAGGACAAAGTCAGCCAGACACCTTGTACTGGGCACGCGTCAGACCACAGCCGGCCGTTTCCTTTCTTTAGCCAGCCGTCCTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 90 bp | GGCAGCTCCATGCCAAGCCACAATCTGGGACAGGTGGCACCTGTGTaGCACTTTGACCTGATCCAGGCTTTCAAGGGACTCCTAGAATCT | + |
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Preference number: 1 (lower is better) Translates to: GSSMPSHNLGQVAPV*HFDLIQAFKGLLES Trigger: AGATTCTAGGAGTCCCTTGAAAGCCTGGATCAGGTCAAAGTGCCACACAGGTGCCACCTGTCCCAGATTGTGGCTTGGCATGGAGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 90 bp | ACCAGGTCCCGTACAGTCCACTGTCTTCCCTTCCTGAACTTGTCCTaGGGTGGGTGCCTGGCTGTCCTCAAACTATGGCTGCATAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: TRSRTVHCLPFLNLS*GGCLAVLKLWLHRN Trigger: GTTTCTATGCAGCCATAGTTTGAGGACAGCCAGGCACCCACCTCAGGACAAGTTCAGGAAGGGAAGACAGTGGACTGTACGGGACCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 90 bp | TTCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTaGCTGCACTTACTGACTTGCACAGCACAGCATTCCACACCCACA | + |
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Preference number: 1 (lower is better) Translates to: FTGEASFSDCESSLE*LHLLTCTAQHSTPT Trigger: TGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
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| 3UTR GCA 90 bp | TGCAGATGTGTTCAATGCAGATGTGTTCCTCTGGAGAGCAGACCTTaGTCAGCTACACAGAGGGAAGTCACTGGGCTAAACCGTTCATCA | + |
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Preference number: 1 (lower is better) Translates to: CRCVQCRCVPLESRP*SATQREVTGLNRSS Trigger: TGATGAACGGTTTAGCCCAGTGACTTCCCTCTGTGTAGCTGAGCAAGGTCTGCTCTCCAGAGGAACACATCTGCATTGAACACATCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGCTCGGCAGCTTCCTGTaGCCAAGGCACGCGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SAPGLSQATPVPLASYSQLGSFL*PRHAWP Trigger: TGGCCACGCGTGCCTTGGCCACAGGAAGCTGCCGAG...CTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCACAGAACCTGCCCCACCCCGACTTCCAGCGCTGAGGGAGAGGGAGGGCACGTGGCCATCAGGTCCTaGTGGGACCAAGCGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: FHRTCPTPTSSAEGEGGHVAIRS*WDQAKV Trigger: CACTTTCGCTTGGTCCCAGCAGGACCTGATGGCCAC...GTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGGGTGGGGCAGGTTCTGTGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGTGGCCAAGGCACGCGTaGCCATCAGGTCCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PVGSRPRILCRRGGDHSWWPRHA*PSGPAG Trigger: CCCAGCAGGACCTGATGGCCACGCGTGCCTTGGCCA...CCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR TCA 90 bp | AACTCCAAAGAAAGAAATCTGGTTGCCAAGGCCCAGGTGCAGGCCTCAGCCCCACGGCCGGCTGTGGTCTaGCGCGTGCCCAGTACAAGG | + |
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Preference number: 2 (lower is better) Translates to: NSKERNLVAKAQVQASAPRPAVV*RVPSTR Trigger: CCTTGTACTGGGCACGCGTCAGACCACAGCCGGCCG...TGGGGCTGAGGCCTGCACCTGGGCCTTGGCAACCAGATTTCTTTCTTTGGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR TCA 90 bp | AACTCCAAAGAAAGAAATCTGGTTGCCAAGGCCCAGGTGCAGGCCTCAGCCCCACCCGACTTCCAGCGCTaGGGGAGAGGGAGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: NSKERNLVAKAQVQASAPPDFQR*GRGRAQ Trigger: CTGTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGG...TGGGGCTGAGGCCTGCACCTGGGCCTTGGCAACCAGATTTCTTTCTTTGGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR GCA 90 bp | GCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCCGACCACGGATCCTGTaGAGAAGAGGTGGGGATCAT | + |
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Preference number: 2 (lower is better) Translates to: APGLSQATPVPLASYSQSRPRIL*RRGGDH Trigger: ATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCG...GCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCAGCAGTGACAGGCCGGCCGGCTGTGGTCTaGCGCGTGCCCAGTACAAGG | + |
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Preference number: 2 (lower is better) Translates to: SGHFPLKAFVSLTPAVTGRPAVV*RVPSTR Trigger: CCTTGTACTGGGCACGCGTCAGACCACAGCCGGCCG...GCCTGTCACTGCTGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR TCA 90 bp | GCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGCCAAGGCCCCGACTTCCAGCGCTaGGGGAGAGGGAGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: AARRQLFKLQRKKSGCQGPDFQR*GRGRAQ Trigger: CTGTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGG...GCCTTGGCAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCCATGCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGGGAAACGGCCGGCTGTaGTCTGACGCGTGCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: TPCGQETAFQTPKKEIWLGNGRL*SDACPV Trigger: TACTGGGCACGCGTCAGACCACAGCCGGCCGTTTCC...CAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGCATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCAGCAGTGACAGGCCTGTGGTCTGACGCGTaGCCAGTACAAGGTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SGHFPLKAFVSLTPAVTGLWSDA*PVQGVW Trigger: CCAGACACCTTGTACTGGGCACGCGTCAGACCACAG...GCCTGTCACTGCTGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCTGAAGCAAGAATTAAGGCTGGAGATTCTGCACTGGGTCCCTGTGGGGGGTGGGGATCATTCGTaGACTAATCTTGAGTGGATC | + |
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Preference number: 2 (lower is better) Translates to: WVLKQELRLEILHWVPVGGGDHS*TNLEWI Trigger: GATCCACTCAAGATTAGTCCACGAATGATCCCCACC...CCCCACAGGGACCCAGTGCAGAATCTCCAGCCTTAATTCTTGCTTCAGGACCCA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGATACAAGAACTTCAGCTTCCCTTACACGTAACAAACTTCACAGAACAGACCAGTCCCTGGGCACATaGTCCCCAGCGCCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KDTRTSASLTRNKLHRTDQSLGT*SPAPPP Trigger: GGGAGGGGGCGCTGGGGACCATGTGCCCAGGGACTG...GTCTGTTCTGTGAAGTTTGTTACGTGTAAGGGAAGCTGAAGTTCTTGTATCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCCATGCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGCGACCACGGATCCTGTaGAGAAGAGGTGGGGATCAT | + |
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Preference number: 2 (lower is better) Translates to: TPCGQETAFQTPKKEIWLRPRIL*RRGGDH Trigger: ATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCG...CAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGCATGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCTGAAGCAAGAATTAAGGCTGGAGATTCTGCACTGGGTCCCTGTGGGGGCTGTCCTCAAACTATaGCTGCATAGAAACACATGG | + |
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Preference number: 2 (lower is better) Translates to: WVLKQELRLEILHWVPVGAVLKL*LHRNTW Trigger: CCATGTGTTTCTATGCAGCCATAGTTTGAGGACAGC...CCCCACAGGGACCCAGTGCAGAATCTCCAGCCTTAATTCTTGCTTCAGGACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGATACAAGAACTTCAGCTTCCCTTACACGTAACAAACTTCACAGAACAGACTGGCCAAGGCACGCGTaGCCATCAGGTCCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: KDTRTSASLTRNKLHRTDWPRHA*PSGPAG Trigger: CCCAGCAGGACCTGATGGCCACGCGTGCCTTGGCCA...GTCTGTTCTGTGAAGTTTGTTACGTGTAAGGGAAGCTGAAGTTCTTGTATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTGGATCAAGACATTGTACTTGCAGATGTGTTCAATGCAGATGTGTTCCTCCTAGCCCAGCCACATaGCCAGTCTCGGCAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CFGSRHCTCRCVQCRCVPPSPAT*PVSAAS Trigger: GGAAGCTGCCGAGACTGGCCATGTGGCTGGGCTAGG...AGGAACACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGATACAAGAACTTCAGCTTCCCTTACACGTAACAAACTTCACAGAACAGACATCAGCAGCCAGACGTaGGCAGCTCCATGCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: KDTRTSASLTRNKLHRTDISSQT*AAPCQA Trigger: GGCTTGGCATGGAGCTGCCCACGTCTGGCTGCTGAT...GTCTGTTCTGTGAAGTTTGTTACGTGTAAGGGAAGCTGAAGTTCTTGTATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CAA 90 bp | CACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGACTAATCTaGAGTGGATCTAATGTTCAAAGTGAAGTTGTCTCTTCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: HGSCAEEVGIIRGLI*SGSNVQSEVVSSCV Trigger: CACACAAGAAGAGACAACTTCACTTTGAACATTAGATCCACTCAAGATTAGTCCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTATACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCATCCAGTACCAGGACGGCTaGCTAAAGAAAGGAAACGGC | + |
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Preference number: 2 (lower is better) Translates to: FYTMASRHLSNQPEINFIQYQDG*LKKGNG Trigger: GCCGTTTCCTTTCTTTAGCCAGCCGTCCTGGTACTG...GATGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CAA 90 bp | AGATGGGGTGCAGGGTGGGAAGAACATGATTTCCTATTTGCTGTTTaGGATCAAGACATTGTACTTGCAGATGTGTTCAATGCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: RWGAGWEEHDFLFAV*DQDIVLADVFNADV Trigger: CACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAAACAGCAAATAGGAAATCATGTTCTTCCCACCCTGCACCCCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTGGATCAAGACATTGTACTTGCAGATGTGTTCAATGCAGATGTGTTCCTACCTGTGTGGCACTTTaGCCTGATCCAGGCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: CFGSRHCTCRCVQCRCVPTCVAL*PDPGFQ Trigger: TTGAAAGCCTGGATCAGGTCAAAGTGCCACACAGGT...AGGAACACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTGGATCAAGACATTGTACTTGCAGATGTGTTCAATGCAGATGTGTTCCTGGTGGGGATCATTCGTaGACTAATCTTGAGTGGATC | + |
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Preference number: 2 (lower is better) Translates to: CFGSRHCTCRCVQCRCVPGGDHS*TNLEWI Trigger: GATCCACTCAAGATTAGTCCACGAATGATCCCCACC...AGGAACACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 72 bp | CAGCTCTCCCAGCAGAGTGAACCTGGCTGCAGTCCCTaGGCACATGGTCCCCAGCGCCCCCTCCCAGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: QLSQQSEPGCSP*AHGPQRPLPVL Trigger: TAGCACTGGGAGGGGGCGCTGGGGACCATGTGCCCAGGGACTGCAGCCAGGTTCACTCTGCTGGGAGAGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR GCA 72 bp | AGGCCTCAGCCCCAGGGCTGTCACAAGCAACGCCAGTaGCCTTGGCAAGCTACAGCCAGAGCCAGTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: RPQPQGCHKQRQ*PWQATARASGV Trigger: GACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGCTGAGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 72 bp | CAGCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCTTaGCAAGCTACAGCCAGAGCCAGTGGGGTCACGACC | + |
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Preference number: 3 (lower is better) Translates to: QPQGCHKQRQCP*QATARASGVTT Trigger: GGTCGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 72 bp | ACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCCAGTaGGGTCACGACCACGGATCCTGTGCAGAAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: TPVPLASYSQSQ*GHDHGSCAEEV Trigger: CACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CCA 72 bp | CAGGACGGCTGGCTAAAGAAAGGAAACGGCCGGCTGTaGTCTGACGCGTGCCCAGTACAAGGTGTCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: QDGWLKKGNGRL*SDACPVQGVWL Trigger: CAGCCAGACACCTTGTACTGGGCACGCGTCAGACCACAGCCGGCCGTTTCCTTTCTTTAGCCAGCCGTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 72 bp | CGGCTGGCTAAAGAAAGGAAACGGCCGGCTGTGGTCTaGCGCGTGCCCAGTACAAGGTGTCTGGCTGACTTT | + |
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Preference number: 3 (lower is better) Translates to: RLAKERKRPAVV*RVPSTRCLADF Trigger: AAAGTCAGCCAGACACCTTGTACTGGGCACGCGTCAGACCACAGCCGGCCGTTTCCTTTCTTTAGCCAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 72 bp | GCGTGGCCATCAGGTCCTGCTGGGACCAAGCGAAAGTaGAGAGGTGAAAGGCCGACCACGGAAGAGTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: AWPSGPAGTKRK*RGERPTTEEFL Trigger: CAGAAACTCTTCCGTGGTCGGCCTTTCACCTCTTCACTTTCGCTTGGTCCCAGCAGGACCTGATGGCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR TCA 72 bp | ACACCAGGTCCCGTACAGTCCACTGTCTTCCCTTCCTaGACTTGTCCTGAGGTGGGTGCCTGGCTGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TPGPVQSTVFPS*TCPEVGAWLSS Trigger: TGAGGACAGCCAGGCACCCACCTCAGGACAAGTTCAGGAAGGGAAGACAGTGGACTGTACGGGACCTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR GCA 72 bp | ACTCCAAAGAAAGAAATCTGGTTGCCAAGGCCCAGGTaGAGGCCTCAGCCCCAGGGCTGTCACAAGCAACGC | + |
|
Preference number: 3 (lower is better) Translates to: TPKKEIWLPRPR*RPQPQGCHKQR Trigger: GCGTTGCTTGTGACAGCCCTGGGGCTGAGGCCTGCACCTGGGCCTTGGCAACCAGATTTCTTTCTTTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR GCA 72 bp | AAACCGTTCATCAGCAGCCAGACGTGGGCAGCTCCATaGCAAGCCACAATCTGGGACAGGTGGCACCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KPFISSQTWAAP*QATIWDRWHLC Trigger: ACACAGGTGCCACCTGTCCCAGATTGTGGCTTGGCATGGAGCTGCCCACGTCTGGCTGCTGATGAACGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR CCA 72 bp | AGTCACTGGGCTAAACCGTTCATCAGCAGCCAGACGTaGGCAGCTCCATGCCAAGCCACAATCTGGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SHWAKPFISSQT*AAPCQATIWDR Trigger: CCTGTCCCAGATTGTGGCTTGGCATGGAGCTGCCCACGTCTGGCTGCTGATGAACGGTTTAGCCCAGTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR CCA 72 bp | GGCGTCGAGGCCCGCGCCTCCTTTACTGACTCAGCCTaGTCTGGACACTTTCCGCTTAAGGCTTTTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GVEARASFTDSA*SGHFPLKAFVS Trigger: ACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGACCAGGCTGAGTCAGTAAAGGAGGCGCGGGCCTCGACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR TCA 72 bp | ATCAGGTCCTGCTGGGACCAAGCGAAAGTGAAGAGGTaGAAGGCCGACCACGGAAGAGTTTCTGTCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IRSCWDQAKVKR*KADHGRVSVKA Trigger: AGCTTTGACAGAAACTCTTCCGTGGTCGGCCTTTCACCTCTTCACTTTCGCTTGGTCCCAGCAGGACCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR TCA 72 bp | CGGACTGTGAATCTTCTCTGGAGTGGCTGCACTTACTaGCTTGCACAGCACAGCATTCCACACCCACACATT | + |
|
Preference number: 3 (lower is better) Translates to: RTVNLLWSGCTY*LAQHSIPHPHI Trigger: AATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAGAGAAGATTCACAGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| 3UTR GCA 72 bp | GTTCAATGCAGATGTGTTCCTCTGGAGAGCAGACCTTaGTCAGCTACACAGAGGGAAGTCACTGGGCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VQCRCVPLESRP*SATQREVTGLN Trigger: GTTTAGCCCAGTGACTTCCCTCTGTGTAGCTGAGCAAGGTCTGCTCTCCAGAGGAACACATCTGCATTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR GCA 72 bp | TGTGAATCTTCTCTGGAGTGGCTGCACTTACTGACTTaGACAGCACAGCATTCCACACCCACACATTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CESSLEWLHLLT*TAQHSTPTHLS Trigger: AGACAAATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAGAGAAGATTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| 3UTR GCA 72 bp | TTTGGATCAAGACATTGTACTTGCAGATGTGTTCAATaGAGATGTGTTCCTCTGGAGAGCAGACCTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FGSRHCTCRCVQ*RCVPLESRPCS Trigger: TGAGCAAGGTCTGCTCTCCAGAGGAACACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| 3UTR GCA 72 bp | TTTCCTATTTGCTGTTTTGGATCAAGACATTGTACTTaGAGATGTGTTCAATGCAGATGTGTTCCTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FPICCFGSRHCT*RCVQCRCVPLE Trigger: CTCCAGAGGAACACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAAACAGCAAATAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | GATGGCAGCAGCGGCTCCCCTGTGCGCTCACCCCATGCGGCCAGGAGACAGCTTGCAGGCTGGGCGCTTTaGTGCGCTCGCTCCCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DGSSGSPVRSPHAARRQLAGWAL*CARSRR Trigger: ACGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGC...AAGCTGTCTCCTGGCCGCATGGGGTGAGCGCACAGGGGAGCCGCTGCTGCCATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | GATGGCAGCAGCGGCTCCCCTGTGCGCTCACCCCATGCGGCCAGGAGACAGCTTAGCGAGGCGGCAGGCTaGGCGCTTTGCTGCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DGSSGSPVRSPHAARRQLSEAAG*ALCCAR Trigger: GCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCT...AAGCTGTCTCCTGGCCGCATGGGGTGAGCGCACAGGGGAGCCGCTGCTGCCATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCGGCTGGGCGCTTTGCTaGGCTCGCTCCCGGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: APGLSQATPVPLASYSQSGWALC*ARSRRL Trigger: GAGACGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCC...GCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGGCAGGCTGGGCGCTTTaGTGCGCTCGCTCCCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVGSRPRILCRRGGDHSWAGWAL*CARSRR Trigger: ACGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGC...CCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAACCTGCCCCACCCCGACTTCCAGCGCTGAGGGAGAGGGAGGGCACAGCTCCAGCTTGGTCTaGCACTGGAAGCAGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FHRTCPTPTSSAEGEGGHSSSLV*HWKQRR Trigger: GCGCCGCTGCTTCCAGTGCCAGACCAAGCTGGAGCT...GTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGGGTGGGGCAGGTTCTGTGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCCAGTGGGGTCACGCCCTCCCCGATGCGCTaGCAGGAGCGCCCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKQRQCPWQATARASGVTPSPMR*QERPTF Trigger: GAAAGTGGGGCGCTCCTGCCAGCGCATCGGGGAGGG...CGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGCAGCGAGGCGGCAGGCTaGGCGCTTTGCTGCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASRVRPRSRTVNLLWSGCSEAAG*ALCCAR Trigger: GCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCT...GCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| 3UTR CAA 72 bp | TCAGCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCTaGGCAAGCTACAGCCAGAGCCAGTGGGGTCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAPGLSQATPVP*ASYSQSQWGHD Trigger: GTCGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | TCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGCACTGGCTGGGCGCTTTGCTaGGCTCGCTCCCGGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRVRPRSRTVNLLWSGCTGWALC*ARSRRL Trigger: GAGACGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCC...AGTGCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR GCA 90 bp | TTCCACAGAACCTGCCCCACCCCGACTTCCAGCGCTGAGGGAGAGGGAGGGCACGATCCCAGTTCCTGCTaGACCAGCTCCAGCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FHRTCPTPTSSAEGEGGHDPSSC*TSSSLV Trigger: GACCAAGCTGGAGCTGGTGCAGCAGGAACTGGGATC...GTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGGGTGGGGCAGGTTCTGTGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | TTCCACAGAACCTGCCCCACCCCGACTTCCAGCGCTGAGGGAGAGGGAGGGCACTCTGTCGGGAGCGACTaGTGGCTGGGACTAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FHRTCPTPTSSAEGEGGHSVGSD*WLGLRV Trigger: AACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGA...GTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGGGTGGGGCAGGTTCTGTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCGATCCCAGTTCCTGCTaGACCAGCTCCAGCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APGLSQATPVPLASYSQSDPSSC*TSSSLV Trigger: GACCAAGCTGGAGCTGGTGCAGCAGGAACTGGGATC...GCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGAGCTCCAGCTTGGTCTaGCACTGGAAGCAGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVGSRPRILCRRGGDHSWSSSLV*HWKQRR Trigger: GCGCCGCTGCTTCCAGTGCCAGACCAAGCTGGAGCT...CCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAACCTGCCCCACCCCGACTTCCAGCGCTGAGGGAGAGGGAGGGCACGTTTCACCATTTTCATaGTGGCTTCCTCGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHRTCPTPTSSAEGEGGHVSPFS*WLPRGH Trigger: GTGGCCGCGAGGAAGCCATCATGAAAATGGTGAAAC...GTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGGGTGGGGCAGGTTCTGTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CTGCATAGAAACACATGGAGGCAAGGGATGGCAGCAGCGGCTCCCCTGTGCGCTGTCGGGAGCGACTGCTaGCTGGGACTAAGAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRNTWRQGMAAAAPLCAVGSDC*LGLRVG Trigger: GCCAACTCTTAGTCCCAGCCAGCAGTCGCTCCCGAC...AGCGCACAGGGGAGCCGCTGCTGCCATCCCTTGCCTCCATGTGTTTCTATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | CTGCATAGAAACACATGGAGGCAAGGGATGGCAGCAGCGGCTCCCCTGTGCGCTCAGGATCCCAGTTCCTaGTGCACCAGCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHRNTWRQGMAAAAPLCAQDPSS*CTSSSL Trigger: CAAGCTGGAGCTGGTGCAGCAGGAACTGGGATCCTG...AGCGCACAGGGGAGCCGCTGCTGCCATCCCTTGCCTCCATGTGTTTCTATGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR TCA 90 bp | CCAGTGGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGGTTTCACCATTTTCATaGTGGCTTCCTCGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVGSRPRILCRRGGDHSWVSPFS*WLPRGH Trigger: GTGGCCGCGAGGAAGCCATCATGAAAATGGTGAAAC...CCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAACCTGCCCCACCCCGACTTCCAGCGCTGAGGGAGAGGGAGGGCACGCTGTTACTTGTACTTaGGGTGGAATCATCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHRTCPTPTSSAEGEGGHAVTCT*GGIIIW Trigger: CCAGATGATGATTCCACCCCAAGTACAAGTAACAGC...GTGCCCTCCCTCTCCCTCAGCGCTGGAAGTCGGGGTGGGGCAGGTTCTGTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGCACTTAGTCGGGAGCGACTGCTaGCTGGGACTAAGAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGEASFSDCESSLEWLHLVGSDC*LGLRVG Trigger: GCCAACTCTTAGTCCCAGCCAGCAGTCGCTCCCGAC...TAAGTGCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTGAAGCAAGAATTAAGGCTGGAGATTCTGCACTGGGTCCCTGTGGGGGCACCAGCTCCAGCTTaGTCTGGCACTGGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVLKQELRLEILHWVPVGAPAPA*SGTGSS Trigger: GCTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGC...CCCCACAGGGACCCAGTGCAGAATCTCCAGCCTTAATTCTTGCTTCAGGACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | GATGGCAGCAGCGGCTCCCCTGTGCGCTCACCCCATGCGGCCAGGAGACAGCTTGAAAACAAATCTGATTaGCTGTTACTTGTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGSSGSPVRSPHAARRQLENKSD*LLLVLG Trigger: CCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTC...AAGCTGTCTCCTGGCCGCATGGGGTGAGCGCACAGGGGAGCCGCTGCTGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCAGCAGTGACAGGCCGGCCACGGCCCATGTaGTCGAACGTACAGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGHFPLKAFVSLTPAVTGRPRPM*SNVQSC Trigger: GCACGACTGTACGTTCGACCACATGGGCCGTGGCCG...GCCTGTCACTGCTGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | GCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGCCAAGGCCGGCCACGGCCCATGTaGTCGAACGTACAGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AARRQLFKLQRKKSGCQGRPRPM*SNVQSC Trigger: GCACGACTGTACGTTCGACCACATGGGCCGTGGCCG...GCCTTGGCAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAGTGGCTGCACTTACTGACTTGCACAGCACAGCATTCCACACCCACACATTCTGTCGGGAGCGACTaGTGGCTGGGACTAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEWLHLLTCTAQHSTPTHSVGSD*WLGLRV Trigger: AACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGA...ATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGACCAAGCGAAAGTGAAGAGGTGAAAGGCCGACCACGGAAGAGTTTCTGTTCGAACGTACAGTCGTaGTGCTCTGGGAGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPSESEEVKGRPRKSFCSNVQS*CSGRRC Trigger: ACATCGCCTCCCAGAGCAGCACGACTGTACGTTCGA...ACAGAAACTCTTCCGTGGTCGGCCTTTCACCTCTTCACTTTCGCTTGGTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCGAGCGAGGCGGCAGGCTaGGCGCTTTGCTGCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LADFVLNKANISELRTASSEAAG*ALCCAR Trigger: GCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCT...CGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CGCTTCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGGCTGGGACTAAGAGTTaGCGTGGTTACAGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RFTGEASFSDCESSLEWLAGTKS*RGYRGI Trigger: AATACCTCTGTAACCACGCCAACTCTTAGTCCCAGC...CAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGCGCTGTTACTTGTACTTaGGGTGGAATCATCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASRVRPRSRTVNLLWSGCAVTCT*GGIIIW Trigger: CCAGATGATGATTCCACCCCAAGTACAAGTAACAGC...GCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCATGCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGGCACCAGCTCCAGCTTaGTCTGGCACTGGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPCGQETAFQTPKKEIWLAPAPA*SGTGSS Trigger: GCTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGC...CAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGCATGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGTACTTGTACTTGGGGTaGAATCATCATCTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVGSRPRILCRRGGDHSWYLYLG*NHHLVV Trigger: AACAACCAGATGATGATTCCACCCCAAGTACAAGTA...CCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGTGTTGTTGTCACTGGTaGTCTCTTCGGAAAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVGSRPRILCRRGGDHSWCCCHW*SLRKTN Trigger: ATTTGTTTTCCGAAGAGACCACCAGTGACAACAACA...CCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR TCA 90 bp | CTGCATAGAAACACATGGAGGCAAGGGATGGCAGCAGCGGCTCCCCTGTGCGCTTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LHRNTWRQGMAAAAPLCAFGKQI*LAVTCT Trigger: AGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAA...AGCGCACAGGGGAGCCGCTGCTGCCATCCCTTGCCTCCATGTGTTTCTATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | ATTCGTGGACTAATCTTGAGTGGATCTAATGTTCAAAGTGAAGTTGTCTCTTCTGGCTGGGCGCTTTGCTaGGCTCGCTCCCGGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRGLILSGSNVQSEVVSSGWALC*ARSRRL Trigger: GAGACGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCC...AGAAGAGACAACTTCACTTTGAACATTAGATCCACTCAAGATTAGTCCACGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | CCCCATGCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGCAACGTACAGTCGTGCTaGTCTGGGAGGCGATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHAARRQLFKLQRKKSGCNVQSC*SGRRCN Trigger: GTTACATCGCCTCCCAGAGCAGCACGACTGTACGTT...GCAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGCATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGCTGTTGTTGTCACTGGTaGTCTCTTCGGAAAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASRVRPRSRTVNLLWSGCCCCHW*SLRKTN Trigger: ATTTGTTTTCCGAAGAGACCACCAGTGACAACAACA...GCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTCGCGGTCGCTTCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LVAVASRVRPRSRTVNLLFGKQI*LAVTCT Trigger: AGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAA...GAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGAAGCGACCGCGACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR CCA 90 bp | ATTCGTGGACTAATCTTGAGTGGATCTAATGTTCAAAGTGAAGTTGTCTCTTCTCCCTCCCCGATGCGCTaGCAGGAGCGCCCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRGLILSGSNVQSEVVSSPSPMR*QERPTF Trigger: GAAAGTGGGGCGCTCCTGCCAGCGCATCGGGGAGGG...AGAAGAGACAACTTCACTTTGAACATTAGATCCACTCAAGATTAGTCCACGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTGGCTGCACTTACTGACTTGCACAGCACAGCATTCCACACCCACACATTTCCTCTGTACTCGGTaGAGTTACATTCAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEWLHLLTCTAQHSTPTHFLCTR*SYIQFC Trigger: ACAGAACTGAATGTAACTTCACCGAGTACAGAGGAA...ATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCAGCAGTGACAGGCGCTGGGACTAAGAGTTaGCGTGGTTACAGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SGHFPLKAFVSLTPAVTGAGTKS*RGYRGI Trigger: AATACCTCTGTAACCACGCCAACTCTTAGTCCCAGC...GCCTGTCACTGCTGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR GCA 90 bp | TGTTTTGGATCAAGACATTGTACTTGCAGATGTGTTCAATGCAGATGTGTTCCTCAGGATCCCAGTTCCTaGTGCACCAGCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CFGSRHCTCRCVQCRCVPQDPSS*CTSSSL Trigger: CAAGCTGGAGCTGGTGCAGCAGGAACTGGGATCCTG...AGGAACACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR GCA 90 bp | CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCGAACGTACAGTCGTGCTaGTCTGGGAGGCGATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LADFVLNKANISELRTASNVQSC*SGRRCN Trigger: GTTACATCGCCTCCCAGAGCAGCACGACTGTACGTT...CGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CCA 90 bp | CTGGAGTGGCTGCACTTACTGACTTGCACAGCACAGCATTCCACACCCACACATGAAAACAAATCTGATTaGCTGTTACTTGTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEWLHLLTCTAQHSTPTHENKSD*LLLVLG Trigger: CCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTC...ATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR GCA 90 bp | TTTTATACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCATCTCTGTCGGGAGCGACTaGTGGCTGGGACTAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FYTMASRHLSNQPEINFISVGSD*WLGLRV Trigger: AACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGA...GATGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGTATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR GCA 90 bp | AAAGATACAAGAACTTCAGCTTCCCTTACACGTAACAAACTTCACAGAACAGACTCGAACGTACAGTCGTaGTGCTCTGGGAGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KDTRTSASLTRNKLHRTDSNVQS*CSGRRC Trigger: ACATCGCCTCCCAGAGCAGCACGACTGTACGTTCGA...GTCTGTTCTGTGAAGTTTGTTACGTGTAAGGGAAGCTGAAGTTCTTGTATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCAGCAGTGACAGGCTGTTGTTGTCACTGGTaGTCTCTTCGGAAAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGHFPLKAFVSLTPAVTGCCCHW*SLRKTN Trigger: ATTTGTTTTCCGAAGAGACCACCAGTGACAACAACA...GCCTGTCACTGCTGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCGGCTGGGACTAAGAGTTaGCGTGGTTACAGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LADFVLNKANISELRTASAGTKS*RGYRGI Trigger: AATACCTCTGTAACCACGCCAACTCTTAGTCCCAGC...CGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTAAGTCTGACTCCAGCAGTGACAGGCATGTGTTGTTGTAAATCCACTAGCTTCCTCTGTACTCGGTaGAGTTACATTCAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVSLTPAVTGMCCCKSTSFLCTR*SYIQFC Trigger: ACAGAACTGAATGTAACTTCACCGAGTACAGAGGAA...GCTAGTGGATTTACAACAACACATGCCTGTCACTGCTGGAGTCAGACTTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CAA 72 bp | TGTGCAGAAGAGGTGGGGATCATTCGTGGACTAATCTaGAGTGGATCTAATGTTCAAAGTGAAGTTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAEEVGIIRGLI*SGSNVQSEVVS Trigger: AGAGACAACTTCACTTTGAACATTAGATCCACTCAAGATTAGTCCACGAATGATCCCCACCTCTTCTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CCA 90 bp | TTTTATACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCATCGCTGTTACTTGTACTTaGGGTGGAATCATCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYTMASRHLSNQPEINFIAVTCT*GGIIIW Trigger: CCAGATGATGATTCCACCCCAAGTACAAGTAACAGC...GATGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGTATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CCA 90 bp | AAAGATACAAGAACTTCAGCTTCCCTTACACGTAACAAACTTCACAGAACAGACTACTTGTACTTGGGGTaGAATCATCATCTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KDTRTSASLTRNKLHRTDYLYLG*NHHLVV Trigger: AACAACCAGATGATGATTCCACCCCAAGTACAAGTA...GTCTGTTCTGTGAAGTTTGTTACGTGTAAGGGAAGCTGAAGTTCTTGTATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR TCA 90 bp | AAAGATACAAGAACTTCAGCTTCCCTTACACGTAACAAACTTCACAGAACAGACTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KDTRTSASLTRNKLHRTDFGKQI*LAVTCT Trigger: AGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAA...GTCTGTTCTGTGAAGTTTGTTACGTGTAAGGGAAGCTGAAGTTCTTGTATCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| 3UTR CAA 72 bp | AACATGATTTCCTATTTGCTGTTTTGGATCAAGACATaGTACTTGCAGATGTGTTCAATGCAGATGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NMISYLLFWIKT*YLQMCSMQMCS Trigger: GGAACACATCTGCATTGAACACATCTGCAAGTACAATGTCTTGATCCAAAACAGCAAATAGGAAATCATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | GATGGCAGCAGCGGCTCCCCTGTGCGCTCACCCCATGCGGCCAGGAGACAGCTTGGCAGGCTGGGCGCTTaGCTGCGCTCGCTCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DGSSGSPVRSPHAARRQLGRLGA*LRSLPA Trigger: CGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCC...AAGCTGTCTCCTGGCCGCATGGGGTGAGCGCACAGGGGAGCCGCTGCTGCCATC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS GCA 90 bp | AGCTCCAGCTTGGTCTGGCACTGGAAGCAGCGGCGCCGGCTCTTCTaGTTCGACCGGCCGCTCTCCTCAGGCCGCTCGGGGTTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLVWHWKQRRRLF*FDRPLSSGRSGFST Trigger: AGTAGAGAACCCCGAGCGGCCTGAGGAGAGCGGCCGGTCGAAGCAGAAGAGCCGGCGCCGCTGCTTCCAGTGCCAGACCAAGCTGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS CCA 90 bp | CAGGATCCCAGTTCCTGCTGCACCAGCTCCAGCTTGGTCTGGCACTaGAAGCAGCGGCGCCGGCTCTTCTGCTTCGACCGGCCGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QDPSSCCTSSSLVWH*KQRRRLFCFDRPLS Trigger: GGAGAGCGGCCGGTCGAAGCAGAAGAGCCGGCGCCGCTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGCAGCAGGAACTGGGATCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS CCA 90 bp | CAGCGACAGGATCCCAGTTCCTGCTGCACCAGCTCCAGCTTGGTCTaGCACTGGAAGCAGCGGCGCCGGCTCTTCTGCTTCGACCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QRQDPSSCCTSSSLV*HWKQRRRLFCFDRP Trigger: CGGCCGGTCGAAGCAGAAGAGCCGGCGCCGCTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGCAGCAGGAACTGGGATCCTGTCGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS CCA 90 bp | AGCCACAGCGACAGGATCCCAGTTCCTGCTGCACCAGCTCCAGCTTaGTCTGGCACTGGAAGCAGCGGCGCCGGCTCTTCTGCTTCGACC | + |
|
Preference number: 5 (lower is better) Translates to: SHSDRIPVPAAPAPA*SGTGSSGAGSSAST Trigger: GGTCGAAGCAGAAGAGCCGGCGCCGCTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGCAGCAGGAACTGGGATCCTGTCGCTGTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS TCA 90 bp | GCTGGCAGGAGCGCCCCACTTTCCGGTCCAGTTTCACCATTTTCATaGTGGCTTCCTCGCGGCCACGGCCCATGTGGTCGAACGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGRSAPLSGPVSPFS*WLPRGHGPCGRTYS Trigger: ACTGTACGTTCGACCACATGGGCCGTGGCCGCGAGGAAGCCATCATGAAAATGGTGAAACTGGACCGGAAAGTGGGGCGCTCCTGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | CACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCCAGTGGGGTCACGCAGAGATTCATAGTCTaGCTGGACCCCCAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HKQRQCPWQATARASGVTQRFIV*LDPQKP Trigger: CGGCTTCTGGGGGTCCAGCAAGACTATGAATCTCTG...CGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | ACTGACTTGCACAGCACAGCATTCCACACCCACACATTTGTCTTAAACAGAATCGGCAGGCTGGGCGCTTaGCTGCGCTCGCTCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TDLHSTAFHTHTFVLNRIGRLGA*LRSLPA Trigger: CGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCC...GATTCTGTTTAAGACAAATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGGGCTGTCACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCGTGGTTACAGAGGTATaGTTGTTGTCACTGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: APGLSQATPVPLASYSQSVVTEV*LLSLVV Trigger: GACCACCAGTGACAACAACAATACCTCTGTAACCAC...GCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTGACAGCCCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | CACAAGCAACGCCAGTGCCCTTGGCAAGCTACAGCCAGAGCCAGTGGGGTCACGGGCTGTTACTTGTACTaGGGGTGGAATCATCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKQRQCPWQATARASGVTGCYLY*GWNHHL Trigger: CAGATGATGATTCCACCCCAAGTACAAGTAACAGCC...CGTGACCCCACTGGCTCTGGCTGTAGCTTGCCAAGGGCACTGGCGTTGCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | CTGCATAGAAACACATGGAGGCAAGGGATGGCAGCAGCGGCTCCCCTGTGCGCTACAGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LHRNTWRQGMAAAAPLCATEVLL*SLVVSS Trigger: CGAAGAGACCACCAGTGACAACAACAATACCTCTGT...AGCGCACAGGGGAGCCGCTGCTGCCATCCCTTGCCTCCATGTGTTTCTATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS CCA 90 bp | AGTTTCACCATTTTCATGATGGCTTCCTCGCGGCCACGGCCCATGTaGTCGAACGTACAGTCGTGCTGCTCTGGGAGGCGATGTAACATA | + |
|
Preference number: 5 (lower is better) Translates to: SFTIFMMASSRPRPM*SNVQSCCSGRRCNI Trigger: TATGTTACATCGCCTCCCAGAGCAGCACGACTGTACGTTCGACCACATGGGCCGTGGCCGCGAGGAAGCCATCATGAAAATGGTGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | CCAGTGGGGTCACGACCACGGATCCTGTGCAGAAGAGGTGGGGATCATTCGTGGCTGATTGGCTGTTACTaGTACTTGGGGTGGAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PVGSRPRILCRRGGDHSWLIGCY*YLGWNH Trigger: ATGATTCCACCCCAAGTACAAGTAACAGCCAATCAG...CCACGAATGATCCCCACCTCTTCTGCACAGGATCCGTGGTCGTGACCCCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | GCTTCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGCGTGGTTACAGAGGTATaGTTGTTGTCACTGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASRVRPRSRTVNLLWSGCVVTEV*LLSLVV Trigger: GACCACCAGTGACAACAACAATACCTCTGTAACCAC...GCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
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| CDS-3UTR CAA 90 bp | ATTCGTGGACTAATCTTGAGTGGATCTAATGTTCAAAGTGAAGTTGTCTCTTCTGGCAGGCTGGGCGCTTaGCTGCGCTCGCTCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IRGLILSGSNVQSEVVSSGRLGA*LRSLPA Trigger: CGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCC...AGAAGAGACAACTTCACTTTGAACATTAGATCCACTCAAGATTAGTCCACGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | TCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCAGCAGTGACAGGCCAGAGATTCATAGTCTaGCTGGACCCCCAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGHFPLKAFVSLTPAVTGQRFIV*LDPQKP Trigger: CGGCTTCTGGGGGTCCAGCAAGACTATGAATCTCTG...GCCTGTCACTGCTGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | TCACGGGTGAGGCCTCGTTCTCGGACTGTGAATCTTCTCTGGAGTGGCTGCACTCTGATTGGCTGTTACTaGTACTTGGGGTGGAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRVRPRSRTVNLLWSGCTLIGCY*YLGWNH Trigger: ATGATTCCACCCCAAGTACAAGTAACAGCCAATCAG...AGTGCAGCCACTCCAGAGAAGATTCACAGTCCGAGAACGAGGCCTCACCCGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS GCA 90 bp | TCCTCTGTACTCGGTGAAGTTACATTCAGTTCTGTCGGGAGCGACTaGTGGCTGGGACTAAGAGTTGGCGTGGTTACAGAGGTATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSVLGEVTFSSVGSD*WLGLRVGVVTEVLL Trigger: CAACAATACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGAACTGAATGTAACTTCACCGAGTACAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CCA 90 bp | TACATTCAGTTCTGTCGGGAGCGACTGCTGGCTGGGACTAAGAGTTaGCGTGGTTACAGAGGTATTGTTGTTGTCACTGGTGGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YIQFCRERLLAGTKS*RGYRGIVVVTGGLF Trigger: GAAGAGACCACCAGTGACAACAACAATACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGAACTGAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTGGCTGCACTTACTGACTTGCACAGCACAGCATTCCACACCCACACATACAGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LEWLHLLTCTAQHSTPTHTEVLL*SLVVSS Trigger: CGAAGAGACCACCAGTGACAACAACAATACCTCTGT...ATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTAAGTCTGACTCCAGCAGTGACAGGCATGTGTTGTTGTAAATCCACTAGCTGCACCAGCTCCAGCTaGGTCTGGCACTGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FVSLTPAVTGMCCCKSTSCTSSS*VWHWKQ Trigger: CTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGCA...GCTAGTGGATTTACAACAACACATGCCTGTCACTGCTGGAGTCAGACTTACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS CCA 90 bp | TCTGTACTCGGTGAAGTTACATTCAGTTCTGTCGGGAGCGACTGCTaGCTGGGACTAAGAGTTGGCGTGGTTACAGAGGTATTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLGEVTFSSVGSDC*LGLRVGVVTEVLLL Trigger: CAACAACAATACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGAACTGAATGTAACTTCACCGAGTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTGGCTGCACTTACTGACTTGCACAGCACAGCATTCCACACCCACACATGTTACAGAGGTATTGTaGTTGTCACTGGTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEWLHLLTCTAQHSTPTHVTEVL*LSLVVS Trigger: AGAGACCACCAGTGACAACAACAATACCTCTGTAAC...ATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAGTGCAGCCACTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGACACTTTCCGCTTAAGGCTTTTGTAAGTCTGACTCCAGCAGTGACAGGCACAGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGHFPLKAFVSLTPAVTGTEVLL*SLVVSS Trigger: CGAAGAGACCACCAGTGACAACAACAATACCTCTGT...GCCTGTCACTGCTGGAGTCAGACTTACAAAAGCCTTAAGCGGAAAGTGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CAA 90 bp | ACCCCATGCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGGTGGTTACAGAGGTATaGTTGTTGTCACTGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPCGQETAFQTPKKEIWLVVTEV*LLSLVV Trigger: GACCACCAGTGACAACAACAATACCTCTGTAACCAC...CAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGCATGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS-3UTR CAA 90 bp | TTTTATACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCATCTGCACCAGCTCCAGCTaGGTCTGGCACTGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FYTMASRHLSNQPEINFICTSSS*VWHWKQ Trigger: CTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGCA...GATGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGTATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
||
| CDS TCA 90 bp | GAATCTGCACCACAGGATCTTTTGGTTGGTGTAATTAATGAGACATaGGCTGTGTCTGTGCATGGCCCACATTCCTCTGTACTCGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: ESAPQDLLVGVINET*AVSVHGPHSSVLGE Trigger: TTCACCGAGTACAGAGGAATGTGGGCCATGCACAGACACAGCTCATGTCTCATTAATTACACCAACCAAAAGATCCTGTGGTGCAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | CTTACTGACTTGCACAGCACAGCATTCCACACCCACACATTTGTCTTAAACAGAGGCTGTTACTTGTACTaGGGGTGGAATCATCATCTG | + |
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Preference number: 5 (lower is better) Translates to: LTDLHSTAFHTHTFVLNRGCYLY*GWNHHL Trigger: CAGATGATGATTCCACCCCAAGTACAAGTAACAGCC...TCTGTTTAAGACAAATGTGTGGGTGTGGAATGCTGTGCTGTGCAAGTCAGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
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| CDS-3UTR CAA 90 bp | ACCCCATGCGGCCAGGAGACAGCTTTTCAAACTCCAAAGAAAGAAATCTGGTTGGCACCACAGGATCTTTaGGTTGGTGTAATTAATGAG | + |
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Preference number: 5 (lower is better) Translates to: TPCGQETAFQTPKKEIWLAPQDL*VGVINE Trigger: CTCATTAATTACACCAACCAAAAGATCCTGTGGTGC...CAACCAGATTTCTTTCTTTGGAGTTTGAAAAGCTGTCTCCTGGCCGCATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | TTTGTAAGTCTGACTCCAGCAGTGACAGGCATGTGTTGTTGTAAATCCACTAGCCTGATTGGCTGTTACTaGTACTTGGGGTGGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: FVSLTPAVTGMCCCKSTSLIGCY*YLGWNH Trigger: ATGATTCCACCCCAAGTACAAGTAACAGCCAATCAG...GCTAGTGGATTTACAACAACACATGCCTGTCACTGCTGGAGTCAGACTTACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS TCA 90 bp | AGAGGTATTGTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACTTGGGGTGGAATCATCATCTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RGIVVVTGGLFGKQI*LAVTCTWGGIIIWL Trigger: CAACCAGATGATGATTCCACCCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CCA 90 bp | GTATTGTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTaGCTGTTACTTGTACTTGGGGTGGAATCATCATCTGGTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: VLLLSLVVSSENKSD*LLLVLGVESSSGCF Trigger: GAAACAACCAGATGATGATTCCACCCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS-3UTR CAA 90 bp | ATTCGTGGACTAATCTTGAGTGGATCTAATGTTCAAAGTGAAGTTGTCTCTTCTGGCTGTTACTTGTACTaGGGGTGGAATCATCATCTG | + |
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Preference number: 5 (lower is better) Translates to: IRGLILSGSNVQSEVVSSGCYLY*GWNHHL Trigger: CAGATGATGATTCCACCCCAAGTACAAGTAACAGCC...AGAAGAGACAACTTCACTTTGAACATTAGATCCACTCAAGATTAGTCCACGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | TTTTATACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCATCGTTACAGAGGTATTGTaGTTGTCACTGGTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: FYTMASRHLSNQPEINFIVTEVL*LSLVVS Trigger: AGAGACCACCAGTGACAACAACAATACCTCTGTAAC...GATGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGTATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS-3UTR CAA 90 bp | AAAGATACAAGAACTTCAGCTTCCCTTACACGTAACAAACTTCACAGAACAGACGTTACAGAGGTATTGTaGTTGTCACTGGTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KDTRTSASLTRNKLHRTDVTEVL*LSLVVS Trigger: AGAGACCACCAGTGACAACAACAATACCTCTGTAAC...GTCTGTTCTGTGAAGTTTGTTACGTGTAAGGGAAGCTGAAGTTCTTGTATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS CCA 72 bp | ACCCCCAGAAGCCGCAGGGACAGCGAGGCGGCAGGCTaGGCGCTTTGCTGCGCTCGCTCCCGGCGTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TPRSRRDSEAAG*ALCCARSRRLP Trigger: TGGGAGACGCCGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCTGTCCCTGCGGCTTCTGGGGGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS GCA 72 bp | TTGGTCTGGCACTGGAAGCAGCGGCGCCGGCTCTTCTaGTTCGACCGGCCGCTCTCCTCAGGCCGCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVWHWKQRRRLF*FDRPLSSGRSG Trigger: CCCCGAGCGGCCTGAGGAGAGCGGCCGGTCGAAGCAGAAGAGCCGGCGCCGCTGCTTCCAGTGCCAGACCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS CCA 72 bp | AGTTCCTGCTGCACCAGCTCCAGCTTGGTCTGGCACTaGAAGCAGCGGCGCCGGCTCTTCTGCTTCGACCGG | + |
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Preference number: 6 (lower is better) Translates to: SSCCTSSSLVWH*KQRRRLFCFDR Trigger: CCGGTCGAAGCAGAAGAGCCGGCGCCGCTGCTTCCAGTGCCAGACCAAGCTGGAGCTGGTGCAGCAGGAACT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS TCA 72 bp | AGCGCCCCACTTTCCGGTCCAGTTTCACCATTTTCATaGTGGCTTCCTCGCGGCCACGGCCCATGTGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: SAPLSGPVSPFS*WLPRGHGPCGR Trigger: TCGACCACATGGGCCGTGGCCGCGAGGAAGCCATCATGAAAATGGTGAAACTGGACCGGAAAGTGGGGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS GCA 72 bp | TCGCGGCCACGGCCCATGTGGTCGAACGTACAGTCGTaGTGCTCTGGGAGGCGATGTAACATACAGAACACG | + |
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Preference number: 6 (lower is better) Translates to: SRPRPMWSNVQS*CSGRRCNIQNT Trigger: CGTGTTCTGTATGTTACATCGCCTCCCAGAGCAGCACGACTGTACGTTCGACCACATGGGCCGTGGCCGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS CCA 72 bp | ATTTTCATGATGGCTTCCTCGCGGCCACGGCCCATGTaGTCGAACGTACAGTCGTGCTGCTCTGGGAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: IFMMASSRPRPM*SNVQSCCSGRR Trigger: TCGCCTCCCAGAGCAGCACGACTGTACGTTCGACCACATGGGCCGTGGCCGCGAGGAAGCCATCATGAAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 |
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| CDS GCA 72 bp | CTCGGTGAAGTTACATTCAGTTCTGTCGGGAGCGACTaGTGGCTGGGACTAAGAGTTGGCGTGGTTACAGAG | + |
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Preference number: 6 (lower is better) Translates to: LGEVTFSSVGSD*WLGLRVGVVTE Trigger: CTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGAACTGAATGTAACTTCACCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS TCA 72 bp | TGTGTCTGTGCATGGCCCACATTCCTCTGTACTCGGTaGAGTTACATTCAGTTCTGTCGGGAGCGACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CVCAWPTFLCTR*SYIQFCRERLL Trigger: CAGCAGTCGCTCCCGACAGAACTGAATGTAACTTCACCGAGTACAGAGGAATGTGGGCCATGCACAGACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226208.3 |
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| CDS GCA 72 bp | TTCCTGAGCAAGGCTCTCACGCTGATGCTCCTGGGCTaGTCTAAGGCTCTCACAGATAGAGACTTACATTCC | + |
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Preference number: 6 (lower is better) Translates to: FLSKALTLMLLG*SKALTDRDLHS Trigger: GGAATGTAAGTCTCTATCTGTGAGAGCCTTAGAGCAGCCCAGGAGCATCAGCGTGAGAGCCTTGCTCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234671.2 |
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| CDS CCA 72 bp | GGTGAAGTTACATTCAGTTCTGTCGGGAGCGACTGCTaGCTGGGACTAAGAGTTGGCGTGGTTACAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GEVTFSSVGSDC*LGLRVGVVTEV Trigger: TACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCAGTCGCTCCCGACAGAACTGAATGTAACTTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CAA 90 bp | GACTGCTGGCTGGGACTAAGAGTTGGCGTGGTTACAGAGGTATTGTaGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DCWLGLRVGVVTEVL*LSLVVSSENKSDWL Trigger: CAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CAA 90 bp | AGCGACTGCTGGCTGGGACTAAGAGTTGGCGTGGTTACAGAGGTATaGTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTGG | + |
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Preference number: 6 (lower is better) Translates to: SDCWLGLRVGVVTEV*LLSLVVSSENKSDW Trigger: CCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCAGTCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CAA 90 bp | TGCTGGCTGGGACTAAGAGTTGGCGTGGTTACAGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTGGCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: CWLGLRVGVVTEVLL*SLVVSSENKSDWLL Trigger: TAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CAA 72 bp | TGGCTGGGACTAAGAGTTGGCGTGGTTACAGAGGTATaGTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: WLGLRVGVVTEV*LLSLVVSSENK Trigger: TTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCTGTAACCACGCCAACTCTTAGTCCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS TCA 72 bp | GTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACTTGGGGTGGAATCATC | + |
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Preference number: 6 (lower is better) Translates to: VVVTGGLFGKQI*LAVTCTWGGII Trigger: GATGATTCCACCCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CCA 72 bp | TTGGCGTGGTTACAGAGGTATTGTTGTTGTCACTGGTaGTCTCTTCGGAAAACAAATCTGATTGGCTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: LAWLQRYCCCHW*SLRKTNLIGCY Trigger: GTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCTGTAACCACGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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| CDS CCA 72 bp | TTGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTaGCTGTTACTTGTACTTGGGGTGGAATCATCATCT | + |
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Preference number: 6 (lower is better) Translates to: LSLVVSSENKSD*LLLVLGVESSS Trigger: AGATGATGATTCCACCCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057897.10 ENSMUST00000226208.3 ENSMUST00000234671.2 |
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