Pregenerated sensors for ZFAND2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026197Ensembl transcript IDs: ENSMUST00000027394.12, ENSMUST00000160439.8, ENSMUST00000162768.8, ENSMUST00000186227.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTGCTTGGCACTaGTGTCCAGGCTTCTCTGTGCTTCCTTTCCCTGTGGACCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LRAPWSVLHVTPAWH*CPGFSVLPFPVDPG Trigger: TCCAGGGTCCACAGGGAAAGGAAGCACAGAGAAGCCTGGACAGCAGTGCCAAGCAGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR TCA 90 bp | TTCCCGGCCACCCTCTTCTGCAGCAGCAGAGCTAGCTTAGCTGCATaGGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCA | + |
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Preference number: 1 (lower is better) Translates to: FPATLFCSSRASLAA*VSFLSGLHGASSTS Trigger: TGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCATGCAGCTAAGCTAGCTCTGCTGCTGCAGAAGAGGGTGGCCGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR CCA 90 bp | GCACTGCTGTCCAGGCTTCTCTGTGCTTCCTTTCCCTGTGGACCCTaGAGATGTGAGGGTCACAGTCCTTGGGTGAGCCTCTCTCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: ALLSRLLCASFPCGP*RCEGHSPWVSLSPQ Trigger: TTGGGGAGAGAGGCTCACCCAAGGACTGTGACCCTCACATCTCCAGGGTCCACAGGGAAAGGAAGCACAGAGAAGCCTGGACAGCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGGTCACAGTCCTTGGGTaGGCCTCTCTCCCCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSRPSPCLLHVAAPGKREVTVLG*ASLPKP Trigger: GGGCTTGGGGAGAGAGGCTCACCCAAGGACTGTGAC...CTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGTCACAGTCCTTGGGTaGGCCTCTCTCCCCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: QSLLFPALSLSATCGSPRVTVLG*ASLPKP Trigger: GGGCTTGGGGAGAGAGGCTCACCCAAGGACTGTGAC...CCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGACCGGCCACCCTCTTCTaGAGCAGCAGAGCTAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LFPALSLSATCGSPREKGPATLF*SSRASL Trigger: TAAGCTAGCTCTGCTGCTGCAGAAGAGGGTGGCCGG...TCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCGTCCAGGCTTCTCTGTaGTTCCTTTCCCTGTGGACC | + |
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Preference number: 2 (lower is better) Translates to: LHECPSSPGSMERPPRHSVQASL*FLSLWT Trigger: GGTCCACAGGGAAAGGAAGCACAGAGAAGCCTGGAC...GGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTAACAGTCCAGGCTTCTCTGTaGTTCCTTTCCCTGTGGACC | + |
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Preference number: 2 (lower is better) Translates to: PALSLSATCGSPREKGVTVQASL*FLSLWT Trigger: GGTCCACAGGGAAAGGAAGCACAGAGAAGCCTGGAC...TGTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGACTCCTGCTTGGCACTaGTGTCCAGGCTTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QSLLFPALSLSATCGSPRTPAWH*CPGFSV Trigger: CACAGAGAAGCCTGGACAGCAGTGCCAAGCAGGAGT...CCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR CCA 90 bp | TGCATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTTTTCCCTGTGGACCCTaGAGATGTGAGGGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: CMSVLPLRAPWSVLHVTPFPCGP*RCEGHS Trigger: ACTGTGACCCTCACATCTCCAGGGTCCACAGGGAAA...AGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTAACATGATGTTTCCCTGTGGACCCTaGAGATGTGAGGGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PLPVCYMWQPQGKGSNMMFPCGP*RCEGHS Trigger: ACTGTGACCCTCACATCTCCAGGGTCCACAGGGAAA...CATCATGTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR GCA 72 bp | TCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTaGTTGGCACTGCTGTCCAGGCTTCTCTGTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SPGSMERPPRHS*LALLSRLLCAS Trigger: GGAAGCACAGAGAAGCCTGGACAGCAGTGCCAAGCAGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR CAA 90 bp | CCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTAACACCACGTCACTCCTGCTaGGCACTGCTGTCCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PALSLSATCGSPREKGVTPRHSC*ALLSRL Trigger: AAGCCTGGACAGCAGTGCCAAGCAGGAGTGACGTGG...TGTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGATTGCCAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCCCACGTCACTCCTGCTaGGCACTGCTGTCCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: TDCQSLLFPALSLSATCGPRHSC*ALLSRL Trigger: AAGCCTGGACAGCAGTGCCAAGCAGGAGTGACGTGG...GCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTGGCAATCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR GCA 72 bp | TTGCCAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTaGTACATGTGGCAGCCCCAGGGAAAAGGGAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: LPVFTLPGPLPV*YMWQPQGKGSN Trigger: GTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| 3UTR CCA 72 bp | TTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTaGCAGCCCCAGGGAAAAGGGAGTAACATGATGAAA | + |
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Preference number: 3 (lower is better) Translates to: FTLPGPLPVCYM*QPQGKGSNMMK Trigger: TTTCATCATGTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGCTCGGCTCGGAACAGTaGGCCCCGAGGTCCGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: QSLLFPALSLSATCGSPRLGSEQ*APRSGN Trigger: GTTTCCGGACCTCGGGGCTCACTGTTCCGAGCCGAG...CCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | CTGCATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCCAGGAGGCTCTCCTCTaGCCACCGGCACAGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: LHECPSSPGSMERPPRHSQEALL*PPAQAH Trigger: ATGTGCCTGTGCCGGTGGCCAGAGGAGAGCCTCCTG...GGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCATGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | TTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGCTCGGCTCGGAACAGTaGGCCCCGAGGTCCGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: LLFPALSLSATCGSPREKLGSEQ*APRSGN Trigger: GTTTCCGGACCTCGGGGCTCACTGTTCCGAGCCGAG...CTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | CCCTGTGGACCCTGGAGATGTGAGGGTCACAGTCCTTGGGTGAGCCTCTCTCCCCAAGCCCTGCCCTGCTaGTCTGATGACCTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PCGPWRCEGHSPWVSLSPQALPC*SDDLPQ Trigger: CTGGGGAAGGTCATCAGACCAGCAGGGCAGGGCTTG...GGGAGAGAGGCTCACCCAAGGACTGTGACCCTCACATCTCCAGGGTCCACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | TCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGGGGGATGACGGTGCTTaGTGCAGAAGTTTCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SSRPSPCLLHVAAPGKREGDDGA*CRSFGH Trigger: GTGGCCGAAACTTCTGCATCAAGCACCGTCATCCCC...CTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | ATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTGCTGGTCTGCGCAGAAGATaGCCGAGCAGGCATCGCACT | + |
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Preference number: 4 (lower is better) Translates to: MSVLPLRAPWSVLHVTPAGLRRR*PSRHRT Trigger: AGTGCGATGCCTGCTCGGGCATCTTCTGCGCAGACC...AGCAGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | TCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAACAGGAGGCTCTCCTCTaGCCACCGGCACAGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SLLFPALSLSATCGSPREQEALL*PPAQAH Trigger: ATGTGCCTGTGCCGGTGGCCAGAGGAGAGCCTCCTG...TTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | TCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTCATGGTCCAGGGGATaGCGGTGCTTGATGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSRPSPCLLHVAAPGKRESWSRG*RCLMQK Trigger: CTTCTGCATCAAGCACCGTCATCCCCTGGACCATGA...CTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | TCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTGCGCCTGCTGCTGTTaGTATTCTGCCTCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSRPSPCLLHVAAPGKRECACCC*YSASLA Trigger: AGCCAGTGAGGCAGAATACCAACAGCAGCAGGCGCA...CTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | TCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGAGCACAGGCTGCAGTTaGACGGCTTCAAGCTACGAC | + |
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Preference number: 4 (lower is better) Translates to: SSRPSPCLLHVAAPGKRESTGCS*TASSYD Trigger: GTCGTAGCTTGAAGCCGTCCAACTGCAGCCTGTGCT...CTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | CTCCATGGAGCGTCCTCCACGTCACTCCTGCTTGGCACTGCTGTCCAGGCTTCTTCATGGTCCAGGGGATaGCGGTGCTTGATGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LHGASSTSLLLGTAVQASSWSRG*RCLMQK Trigger: CTTCTGCATCAAGCACCGTCATCCCCTGGACCATGA...AGAAGCCTGGACAGCAGTGCCAAGCAGGAGTGACGTGGAGGACGCTCCATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | CTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGACAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LFPALSLSATCGSPREKGQSLSM*SPTARS Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...TCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGTGCGCCTGCTGCTGTTaGTATTCTGCCTCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QSLLFPALSLSATCGSPRCACCC*YSASLA Trigger: AGCCAGTGAGGCAGAATACCAACAGCAGCAGGCGCA...CCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | CTCCATGGAGCGTCCTCCACGTCACTCCTGCTTGGCACTGCTGTCCAGGCTTCTAGCACAGGCTGCAGTTaGACGGCTTCAAGCTACGAC | + |
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Preference number: 4 (lower is better) Translates to: LHGASSTSLLLGTAVQASSTGCS*TASSYD Trigger: GTCGTAGCTTGAAGCCGTCCAACTGCAGCCTGTGCT...AGAAGCCTGGACAGCAGTGCCAAGCAGGAGTGACGTGGAGGACGCTCCATGGAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | AGGCTTCTCTGTGCTTCCTTTCCCTGTGGACCCTGGAGATGTGAGGGTCACAGTGGTCTGCGCAGAAGATaGCCGAGCAGGCATCGCACT | + |
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Preference number: 4 (lower is better) Translates to: RLLCASFPCGPWRCEGHSGLRRR*PSRHRT Trigger: AGTGCGATGCCTGCTCGGGCATCTTCTGCGCAGACC...ACTGTGACCCTCACATCTCCAGGGTCCACAGGGAAAGGAAGCACAGAGAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | CTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGCGTTTTTGCTGTGCTaGGTCAGAACGACAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LFPALSLSATCGSPREKGAFLLC*VRTTVS Trigger: AGAGACTGTCGTTCTGACCCAGCACAGCAAAAACGC...TCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | AGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTGCTTGGGCGTTTTTGCTGTGCTaGGTCAGAACGACAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SVLPLRAPWSVLHVTPAWAFLLC*VRTTVS Trigger: AGAGACTGTCGTTCTGACCCAGCACAGCAAAAACGC...CCAAGCAGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | CCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTAACAGGTATTCTGCCTCACTaGCTGACAGTGCCTGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: PALSLSATCGSPREKGVTGILPH*LTVPVL Trigger: TAGCACAGGCACTGTCAGCCAGTGAGGCAGAATACC...TGTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | ATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTGCTCTTGCGTTTTTGCTGTaGTGGGTCAGAACGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: MSVLPLRAPWSVLHVTPALAFLL*WVRTTV Trigger: GACTGTCGTTCTGACCCAGCACAGCAAAAACGCAAG...AGCAGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | CCCTGTGGACCCTGGAGATGTGAGGGTCACAGTCCTTGGGTGAGCCTCTCTCCCAGAAGCCAGACCTTGTaGTCTAGAAATAGCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PCGPWRCEGHSPWVSLSPRSQTL*SRNSSK Trigger: CTTGCTGCTATTTCTAGAGCACAAGGTCTGGCTTCT...GGGAGAGAGGCTCACCCAAGGACTGTGACCCTCACATCTCCAGGGTCCACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | ACTGATTGCCAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TDCQSLLFPALSLSATCGQSLSM*SPTARS Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...GCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTGGCAATCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | TGCATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTAGAAGCCAGACCTTGTaGTCTAGAAATAGCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: CMSVLPLRAPWSVLHVTPRSQTL*SRNSSK Trigger: CTTGCTGCTATTTCTAGAGCACAAGGTCTGGCTTCT...AGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CCA 90 bp | ACTGATTGCCAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCGGTATTCTGCCTCACTaGCTGACAGTGCCTGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: TDCQSLLFPALSLSATCGGILPH*LTVPVL Trigger: TAGCACAGGCACTGTCAGCCAGTGAGGCAGAATACC...GCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTGGCAATCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | CCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTAACATGATGAAGTCGTCTTCCTCCTaGGAACTTAGAACCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLPVCYMWQPQGKGSNMMKSSSS*ELRTWG Trigger: ACCCCAGGTTCTAAGTTCTCAGGAGGAAGACGACTT...CATCATGTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | AGGCTTCTCTGTGCTTCCTTTCCCTGTGGACCCTGGAGATGTGAGGGTCACAGTAAGTCGTCTTCCTCCTaGGAACTTAGAACCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RLLCASFPCGPWRCEGHSKSSSS*ELRTWG Trigger: ACCCCAGGTTCTAAGTTCTCAGGAGGAAGACGACTT...ACTGTGACCCTCACATCTCCAGGGTCCACAGGGAAAGGAAGCACAGAGAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGTCACTCAAGCCATTCTaGAAAGCAATAACAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: QSLLFPALSLSATCGSPRSLKPF*KAITGE Trigger: CTCTCCTGTTATTGCTTTGCAGAATGGCTTGAGTGA...CCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | TGCATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTGTTCACACTTATTGGTaGAGATCTTGCGTTTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: CMSVLPLRAPWSVLHVTPVHTYW*RSCVFA Trigger: AGCAAAAACGCAAGATCTTCACCAATAAGTGTGAAC...AGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCATGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR TCA 90 bp | ATGAGTGTCCTTCCTCTCCGGGCTCCATGGAGCGTCCTCCACGTCACTCCTGCTGTTCACACTTATTGGTaGAGATCTTGCGTTTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: MSVLPLRAPWSVLHVTPAVHTYW*RSCVFA Trigger: AGCAAAAACGCAAGATCTTCACCAATAAGTGTGAAC...AGCAGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACACTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS GCA 90 bp | GGTCCGGCTTGGACTGGGGGCGGTGCTTGTAGAAGCCAGACCTTGTaGTCTAGAAATAGCAGCAAGCCCTGCCCTGCTGGTCTGATGACC | + |
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Preference number: 5 (lower is better) Translates to: GPAWTGGGACRSQTL*SRNSSKPCPAGLMT Trigger: GGTCATCAGACCAGCAGGGCAGGGCTTGCTGCTATTTCTAGAGCACAAGGTCTGGCTTCTACAAGCACCGCCCCCAGTCCAAGCCGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS-3UTR CAA 90 bp | AGGCTTCTCTGTGCTTCCTTTCCCTGTGGACCCTGGAGATGTGAGGGTCACAGTCTGCGCCTGCTGCTGTaGGTATTCTGCCTCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: RLLCASFPCGPWRCEGHSLRLLL*VFCLTG Trigger: GCCAGTGAGGCAGAATACCAACAGCAGCAGGCGCAG...ACTGTGACCCTCACATCTCCAGGGTCCACAGGGAAAGGAAGCACAGAGAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS GCA 90 bp | AGTTCCAGGGCACGCTGCAGGGCCTCATCCTCACTCAAGCCATTCTaGAAAGCAATAACAGGAGAGGCTGTCCTGGTTGGAAGCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSRARCRASSSLKPF*KAITGEAVLVGSWG Trigger: ACCCCAGCTTCCAACCAGGACAGCCTCTCCTGTTATTGCTTTGCAGAATGGCTTGAGTGAGGATGAGGCCCTGCAGCGTGCCCTGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS CCA 90 bp | TCAAGCTACGACTCTGCGCCTGCTGCTGTTGGTATTCTGCCTCACTaGCTGACAGTGCCTGTGCTAACGCCAAGTCGTCTTCCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSYDSAPAAVGILPH*LTVPVLTPSRLPPE Trigger: CTCAGGAGGAAGACGACTTGGCGTTAGCACAGGCACTGTCAGCCAGTGAGGCAGAATACCAACAGCAGCAGGCGCAGAGTCGTAGCTTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS CCA 90 bp | CTTCCTTTCCCTGTGGACCCTGCTGCTGTTGGTATTCTGCCTCACTaGCTGACAGTGCCTGTGCTAACGCCAAGTCGTCTTCCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LPFPVDPAAVGILPH*LTVPVLTPSRLPPE Trigger: CTCAGGAGGAAGACGACTTGGCGTTAGCACAGGCACTGTCAGCCAGTGAGGCAGAATACCAACAGCAGCAGGGTCCACAGGGAAAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186227.2 |
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| CDS GCA 90 bp | AGAACCTGGGGTTTAGCCTCCGCAAGGGACAGTTCCAGGGCACGCTaGAGGGCCTCATCCTCACTCAAGCCATTCTGCAAAGCAATAACA | + |
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Preference number: 5 (lower is better) Translates to: RTWGLASARDSSRAR*RASSSLKPFCKAIT Trigger: TGTTATTGCTTTGCAGAATGGCTTGAGTGAGGATGAGGCCCTGCAGCGTGCCCTGGAACTGTCCCTTGCGGAGGCTAAACCCCAGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS-3UTR CAA 90 bp | CTCCATGGAGCGTCCTCCACGTCACTCCTGCTTGGCACTGCTGTCCAGGCTTCTTGTAGAAGCCAGACCTaGTGCTCTAGAAATAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LHGASSTSLLLGTAVQASCRSQT*CSRNSS Trigger: GCTGCTATTTCTAGAGCACAAGGTCTGGCTTCTACA...AGAAGCCTGGACAGCAGTGCCAAGCAGGAGTGACGTGGAGGACGCTCCATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS GCA 90 bp | GCTTGTAGAAGCCAGACCTTGTGCTCTAGAAATAGCAGCAAGCCCTaGCCTGCTGGTCTGATGACCTTCCCCAGAGCATTCATGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: ACRSQTLCSRNSSKP*PAGLMTFPRAFMVQ Trigger: CTGGACCATGAATGCTCTGGGGAAGGTCATCAGACCAGCAGGGCAGGGCTTGCTGCTATTTCTAGAGCACAAGGTCTGGCTTCTACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS-3UTR CAA 90 bp | TCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAATGTAGAAGCCAGACCTaGTGCTCTAGAAATAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SLLFPALSLSATCGSPRECRSQT*CSRNSS Trigger: GCTGCTATTTCTAGAGCACAAGGTCTGGCTTCTACA...TTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS TCA 90 bp | GATGACCTTCCCCAGAGCATTCATGGTCCAGGGGATGACGGTGCTTaGTGCAGAAGTTTCGGCCACAGCGATCACAAGTCAGTTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: DDLPQSIHGPGDDGA*CRSFGHSDHKSVSS Trigger: TGATGAAACTGACTTGTGATCGCTGTGGCCGAAACTTCTGCATCAAGCACCGTCATCCCCTGGACCATGAATGCTCTGGGGAAGGTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS GCA 90 bp | AAGTTTCGGCCACAGCGATCACAAGTCAGTTTCATCATCTCCCGCTaGCGGCAGCCAGAACGTTCACACTTATTGGTGAAGATCTTGCGT | + |
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Preference number: 5 (lower is better) Translates to: KFRPQRSQVSFIISR*RQPERSHLLVKILR Trigger: ACGCAAGATCTTCACCAATAAGTGTGAACGTTCTGGCTGCCGGCAGCGGGAGATGATGAAACTGACTTGTGATCGCTGTGGCCGAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS-3UTR CAA 90 bp | TCTTTACTCTTCCCGGCCCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAGAACGTTCACACTTATaGGTGAAGATCTTGCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SLLFPALSLSATCGSPREERSHL*VKILRF Trigger: AAAACGCAAGATCTTCACCAATAAGTGTGAACGTTC...TTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGGGCCGGGAAGAGTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCTGTCTGCTACATGTGGCAGCCCCAGGGAAAAGGGAGTAACATGATGGAACGTTCACACTTATaGGTGAAGATCTTGCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: PLPVCYMWQPQGKGSNMMERSHL*VKILRF Trigger: AAAACGCAAGATCTTCACCAATAAGTGTGAACGTTC...CATCATGTTACTCCCTTTTCCCTGGGGCTGCCACATGTAGCAGACAGGGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS GCA 72 bp | TGGACTGGGGGCGGTGCTTGTAGAAGCCAGACCTTGTaGTCTAGAAATAGCAGCAAGCCCTGCCCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: WTGGGACRSQTL*SRNSSKPCPAG Trigger: ACCAGCAGGGCAGGGCTTGCTGCTATTTCTAGAGCACAAGGTCTGGCTTCTACAAGCACCGCCCCCAGTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS CCA 72 bp | GACGGCTTCAAGCTACGACTCTGCGCCTGCTGCTGTTaGTATTCTGCCTCACTGGCTGACAGTGCCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: DGFKLRLCACCC*YSASLADSACA Trigger: AGCACAGGCACTGTCAGCCAGTGAGGCAGAATACCAACAGCAGCAGGCGCAGAGTCGTAGCTTGAAGCCGTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS CCA 72 bp | GACTCTGCGCCTGCTGCTGTTGGTATTCTGCCTCACTaGCTGACAGTGCCTGTGCTAACGCCAAGTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DSAPAAVGILPH*LTVPVLTPSRL Trigger: AAGACGACTTGGCGTTAGCACAGGCACTGTCAGCCAGTGAGGCAGAATACCAACAGCAGCAGGCGCAGAGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 |
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| CDS CCA 72 bp | CCTGTGGACCCTGCTGCTGTTGGTATTCTGCCTCACTaGCTGACAGTGCCTGTGCTAACGCCAAGTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PVDPAAVGILPH*LTVPVLTPSRL Trigger: AAGACGACTTGGCGTTAGCACAGGCACTGTCAGCCAGTGAGGCAGAATACCAACAGCAGCAGGGTCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186227.2 |
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| CDS CCA 72 bp | CTCTGTGCTTCCTTTCCCTGTGGACCCTGCTGCTGTTaGTATTCTGCCTCACTGGCTGACAGTGCCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LCASFPCGPCCC*YSASLADSACA Trigger: AGCACAGGCACTGTCAGCCAGTGAGGCAGAATACCAACAGCAGCAGGGTCCACAGGGAAAGGAAGCACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186227.2 |
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| CDS TCA 72 bp | CCCCAGAGCATTCATGGTCCAGGGGATGACGGTGCTTaGTGCAGAAGTTTCGGCCACAGCGATCACAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PQSIHGPGDDGA*CRSFGHSDHKS Trigger: TGACTTGTGATCGCTGTGGCCGAAACTTCTGCATCAAGCACCGTCATCCCCTGGACCATGAATGCTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS TCA 72 bp | GACAGTGCCTGTGCTAACGCCAAGTCGTCTTCCTCCTaGGAACTTAGAACCTGGGGTTTAGCCTCCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: DSACANAKSSSS*ELRTWGLASAR Trigger: CCTTGCGGAGGCTAAACCCCAGGTTCTAAGTTCTCAGGAGGAAGACGACTTGGCGTTAGCACAGGCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000186227.2 |
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| CDS CCA 72 bp | AAAGCAATAACAGGAGAGGCTGTCCTGGTTGGAAGCTaGGGTGTAGCTCTGCTTGGGGAGGATGATGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: KAITGEAVLVGS*GVALLGEDDEG Trigger: GCCTTCATCATCCTCCCCAAGCAGAGCTACACCCCAGCTTCCAACCAGGACAGCCTCTCCTGTTATTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS GCA 72 bp | CCACAGCGATCACAAGTCAGTTTCATCATCTCCCGCTaGCGGCAGCCAGAACGTTCACACTTATTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PQRSQVSFIISR*RQPERSHLLVK Trigger: CTTCACCAATAAGTGTGAACGTTCTGGCTGCCGGCAGCGGGAGATGATGAAACTGACTTGTGATCGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS CAA 72 bp | ATCTCCCGCTGCCGGCAGCCAGAACGTTCACACTTATaGGTGAAGATCTTGCGTTTTTGCTGTGCTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ISRCRQPERSHL*VKILRFCCAGS Trigger: TGACCCAGCACAGCAAAAACGCAAGATCTTCACCAATAAGTGTGAACGTTCTGGCTGCCGGCAGCGGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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| CDS CCA 72 bp | ACACTTATTGGTGAAGATCTTGCGTTTTTGCTGTGCTaGGTCAGAACGACAGTCTCTGTCAATGTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TLIGEDLAFLLC*VRTTVSVNVLS Trigger: GGAGAGCACATTGACAGAGACTGTCGTTCTGACCCAGCACAGCAAAAACGCAAGATCTTCACCAATAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027394.12 ENSMUST00000160439.8 ENSMUST00000162768.8 ENSMUST00000186227.2 |
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