Pregenerated sensors for ZFAND2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053581Ensembl transcript IDs: ENSMUST00000079996.13, ENSMUST00000110851.8, ENSMUST00000150992.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCTGAAGCCAGGCATGCGGAGTCCTGGCATGGTGAGGCTGGTTaGTTAAGTCAACCTTGGAGACATCACTGCAGGCCAAGTGCACAC | + |
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Preference number: 1 (lower is better) Translates to: QPEARHAESWHGEAG*LSQPWRHHCRPSAH Trigger: GTGTGCACTTGGCCTGCAGTGATGTCTCCAAGGTTGACTTAAGCAACCAGCCTCACCATGCCAGGACTCCGCATGCCTGGCTTCAGGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR GCA 90 bp | CAGGCAGGTACTCCACTAAACCAGGCCCGAGGGGTTCTTGGCAAGTaGTCTTCTATTGAATTGTGGCCCCAGCTCCTCACTGGTGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: QAGTPLNQARGVLGK*SSIELWPQLLTGGL Trigger: GAGCCCACCAGTGAGGAGCTGGGGCCACAATTCAATAGAAGAGCACTTGCCAAGAACCCCTCGGGCCTGGTTTAGTGGAGTACCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR GCA 90 bp | CTACAGGGTGAGTTCCATGACAGCCAGGGCTCCACAGTGAGACACTaGCTCAAACCACAAAACAGCCTGAAGCCAGGCATGCGGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LQGEFHDSQGSTVRH*LKPQNSLKPGMRSP Trigger: AGGACTCCGCATGCCTGGCTTCAGGCTGTTTTGTGGTTTGAGGCAGTGTCTCACTGTGGAGCCCTGGCTGTCATGGAACTCACCCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR GCA 90 bp | TGGCATGGTGAGGCTGGTTGCTTAAGTCAACCTTGGAGACATCACTaGAGGCCAAGTGCACACCCTTCCTCCATAGCATCCCCAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: WHGEAGCLSQPWRHH*RPSAHPSSIASPAR Trigger: TCTGGCTGGGGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTCCAAGGTTGACTTAAGCAACCAGCCTCACCATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | CATGCGGAGTCCTGGCATGGTGAGGCTGGTTGCTTAAGTCAACCTTaGAGACATCACTGCAGGCCAAGTGCACACCCTTCCTCCATAGCA | + |
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Preference number: 1 (lower is better) Translates to: HAESWHGEAGCLSQP*RHHCRPSAHPSSIA Trigger: TGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTCCAAGGTTGACTTAAGCAACCAGCCTCACCATGCCAGGACTCCGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR TCA 90 bp | ACTGGCTTAGAGAACAGAGTGAGTAGAACCCACCCCTGCCTCCCATaGCAGCTAGAGGCCACGAACCCTGCACAAAGCTGCTATGTATGG | + |
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Preference number: 1 (lower is better) Translates to: TGLENRVSRTHPCLP*QLEATNPAQSCYVW Trigger: CCATACATAGCAGCTTTGTGCAGGGTTCGTGGCCTCTAGCTGTCATGGGAGGCAGGGGTGGGTTCTACTCACTCTGTTCTCTAAGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | GTTTCTGCTCCACAAAGTGCTGAGGACACCCTCAGCCTGCTGCCATaGGGATTCGGCACGAAGAGGAGAAGCTTCTATGGCAAAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: VSAPQSAEDTLSLLP*GFGTKRRSFYGKTR Trigger: TCTGGTTTTGCCATAGAAGCTTCTCCTCTTCGTGCCGAATCCCCATGGCAGCAGGCTGAGGGTGTCCTCAGCACTTTGTGGAGCAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR TCA 90 bp | GTTAAAAGTGAATCCACGCTTGGGAGGCAGAGTCAGGGGGATCACTaGGTTCAAGGCCAGTGTGGTCTACAGGGTGAGTTCCATGACAGC | + |
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Preference number: 1 (lower is better) Translates to: VKSESTLGRQSQGDH*VQGQCGLQGEFHDS Trigger: GCTGTCATGGAACTCACCCTGTAGACCACACTGGCCTTGAACTCAGTGATCCCCCTGACTCTGCCTCCCAAGCGTGGATTCACTTTTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR GCA 90 bp | GCCACTGTACTTCCGAATTCATGTTTAAGAACATGGGCATGTGAGTaGAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: ATVLPNSCLRTWACE*KAQSSEASFAPGAE Trigger: CTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGCACTCACATGCCCATGTTCTTAAACATGAATTCGGAAGTACAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR TCA 90 bp | CTTTGCCACTGTACTTCCGAATTCATGTTTAAGAACATGGGCATGTaGGTGCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LCHCTSEFMFKNMGM*VQGPELRGIICPWS Trigger: GCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGCACTCACATGCCCATGTTCTTAAACATGAATTCGGAAGTACAGTGGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | AACCAAACTCTGGTCCTCTGCAGAGAGGTTCAGGCTCCTAATCACTaGACCATTCCCCAGCCCGCCCAGTGTGCTTTTAATTTCCAACTT | + |
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Preference number: 1 (lower is better) Translates to: NQTLVLCREVQAPNH*TIPQPAQCAFNFQL Trigger: AAGTTGGAAATTAAAAGCACACTGGGCGGGCTGGGGAATGGTCCAGTGATTAGGAGCCTGAACCTCTCTGCAGAGGACCAGAGTTTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | CAGCCTGCTGCCATGGGGATTCGGCACGAAGAGGAGAAGCTTCTATaGCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: QPAAMGIRHEEEKLL*QNQTFLKWLSFLGA Trigger: AGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAGAAGCTTCTCCTCTTCGTGCCGAATCCCCATGGCAGCAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | ATAGTTGTGAGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTaGTCCTCTGCAGAGAGGTTCAGGCTCCTAATCACTGGACCATTC | + |
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Preference number: 1 (lower is better) Translates to: IVVSHLIWVVLGTKL*SSAERFRLLITGPF Trigger: GAATGGTCCAGTGATTAGGAGCCTGAACCTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCTCACAACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | GCTCTAACCTTTGCCACTGTACTTCCGAATTCATGTTTAAGAACATaGGCATGTGAGTGCAAGGCCCAGAGCTCAGAGGCATCATTTGCC | + |
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Preference number: 1 (lower is better) Translates to: ALTFATVLPNSCLRT*ACECKAQSSEASFA Trigger: GGCAAATGATGCCTCTGAGCTCTGGGCCTTGCACTCACATGCCCATGTTCTTAAACATGAATTCGGAAGTACAGTGGCAAAGGTTAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | AAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTaGGAGTTAAAAGTGAATCCACGCTTGGGAGGCAGAGTCAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: KPDISEMALISWCSS*ELKVNPRLGGRVRG Trigger: CCCCCTGACTCTGCCTCCCAAGCGTGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR GCA 90 bp | TCTATGGCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTaGTCTTCTTGGGAGTTAAAAGTGAATCCACGCTTGGGAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SMAKPDISEMALISW*SSWELKVNPRLGGR Trigger: TCTGCCTCCCAAGCGTGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CCA 90 bp | GTTATGCTAGCTATACCTCAAGTGTGTACCACCATGAAAGAGTGCTaGGAAGTGGAAGTACAAAAGATTGGTTTGTCTCAATGTCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: VMLAIPQVCTTMKEC*EVEVQKIGLSQCPH Trigger: GTGGGGACATTGAGACAAACCAATCTTTTGTACTTCCACTTCCCAGCACTCTTTCATGGTGGTACACACTTGAGGTATAGCTAGCATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR GCA 90 bp | GTGCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTaGATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: VLLISNLESSQWKHY*IPWLGRRRIYPTPL Trigger: AAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGGTTCAGGCCACACAGGTGGCACAGGAGTGATGGTGGCTGCACCCCAAGGTGCTCCACAAAGTGCTaGGGACACCCTCAGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TWFRPHRWHRSDGGCTPRCSTKC*GHPQPA Trigger: AGCAGGCTGAGGGTGTCCTCAGCACTTTGTGGAGCA...CCTTGGGGTGCAGCCACCATCACTCCTGTGCCACCTGTGTGGCCTGAACCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATCACCCCTGCCTCCCATaGCAGCTAGAGGCCACGAAC | + |
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Preference number: 2 (lower is better) Translates to: ARPRAQRHHLPLELRLTHHPCLP*QLEATN Trigger: GTTCGTGGCCTCTAGCTGTCATGGGAGGCAGGGGTG...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACATCACTGCAGGCCAAGTGCACACCCTTCCTCCATAGCATCCCCAGCCAGCCCACCCCAAGAAGTTaGTGGACAGCCTCGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ETSLQAKCTPFLHSIPSQPTPRS*WTASCV Trigger: CACACACGAGGCTGTCCAGCAACTTCTTGGGGTGGG...CTGGCTGGGGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATCCAACAGGAAGGAGCTaGTGTGTGGCACCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: ARPRAQRHHLPLELRLTHPTGRS*CVAPTG Trigger: TCCTGTGGGTGCCACACACCAGCTCCTTCCTGTTGG...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | AACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACCCCAAGAAGTTGCTGGACGAAGGAGCTGGTGTGTaGCACCCACAGGAGACTCGC | + |
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Preference number: 2 (lower is better) Translates to: NPAAVCYGNLTHPKKLLDEGAGV*HPQETR Trigger: GCGAGTCTCCTGTGGGTGCCACACACCAGCTCCTTC...GTCCAGCAACTTCTTGGGGTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACATCACTGCAGGCCAAGTGCACACCCTTCCTCCATAGCATCCCCAGCCAGATATGGCTAGGCTGCTaGTCAGAAAGCCCTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ETSLQAKCTPFLHSIPSQIWLGC*SESPGD Trigger: ATCTCCAGGGCTTTCTGACCAGCAGCCTAGCCATAT...CTGGCTGGGGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTCCTCAGGCCTTGAACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACGTCCACCTTGGTTTTTaGGGCAGCGTCTTTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: ASPQALNPAAVCYGNLTHVHLGF*GSVFLA Trigger: GGCCAGAAAGACGCTGCCTCAAAAACCAAGGTGGAC...GTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTTCAAGGCCTGAGGACTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR GCA 90 bp | ACATGGTTCAGGCCACACAGGTGGCACAGGAGTGATGGTGGCTGCACCCCAAGGACCATGAGTAGACTGTaGCCAAAGGCACCTTATTAC | + |
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Preference number: 2 (lower is better) Translates to: TWFRPHRWHRSDGGCTPRTMSRL*PKAPYY Trigger: GTAATAAGGTGCCTTTGGGCACAGTCTACTCATGGT...CCTTGGGGTGCAGCCACCATCACTCCTGTGCCACCTGTGTGGCCTGAACCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATCTGGGAACCAAACTCTaGTCCTCTGCAGAGAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: ARPRAQRHHLPLELRLTHLGTKL*SSAERF Trigger: GAACCTCTCTGCAGAGGACCAGAGTTTGGTTCCCAG...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACAGCCTGAAGCCAGGCATGCGGAGTCCTGGCATGGTGAGGCTGGTTGCACCATGAGTAGACTGTaGCCAAAGGCACCTTATTAC | + |
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Preference number: 2 (lower is better) Translates to: TKQPEARHAESWHGEAGCTMSRL*PKAPYY Trigger: GTAATAAGGTGCCTTTGGGCACAGTCTACTCATGGT...GCAACCAGCCTCACCATGCCAGGACTCCGCATGCCTGGCTTCAGGCTGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATTGGAATACCAAGTCCTaGAGAGGTTTAGCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: ARPRAQRHHLPLELRLTHWNTKS*RGLAQA Trigger: GGCCTGTGCTAAACCTCTCCAGGACTTGGTATTCCA...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACAGCCTGAAGCCAGGCATGCGGAGTCCTGGCATGGTGAGGCTGGTTGCATACAGAGCAGACGGTaGTTCTTTTCTGTCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: TKQPEARHAESWHGEAGCIQSRR*FFSVTG Trigger: TCCTGTGACAGAAAAGAACCACCGTCTGCTCTGTAT...GCAACCAGCCTCACCATGCCAGGACTCCGCATGCCTGGCTTCAGGCTGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CAA 90 bp | AACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACCCCAAGAAGTaGCTGGACAGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: NPAAVCYGNLTHPKK*LDSLVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACGAGGCTGTCCAGCAACTTCTTGGGGTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTGGTCCTCTGCAGAGAGAAGTGTGTACCACCATaGAAGAGTGCTGGGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: EPSNMGGAGNQTLVLCREKCVPP*KSAGKW Trigger: CCACTTCCCAGCACTCTTTCATGGTGGTACACACTT...CTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACCACTGCTTTTCTTCTGTCTGGGTTTCTGCTCCACAAAGTGCTGAGGACACCAACAGGAAGGAGCTaGTGTGTGGCACCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: RTTAFLLSGFLLHKVLRTPTGRS*CVAPTG Trigger: TCCTGTGGGTGCCACACACCAGCTCCTTCCTGTTGG...TGTCCTCAGCACTTTGTGGAGCAGAAACCCAGACAGAAGAAAAGCAGTGGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGTCCTCAGGCCTTGAACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACCTGGTCAGAAAGCCCTaGAGATTTTCCTCTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: ASPQALNPAAVCYGNLTHLVRKP*RFSSHH Trigger: GTGGTGAGAGGAAAATCTCCAGGGCTTTCTGACCAG...GTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTTCAAGGCCTGAGGACTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | CACGAACCCTGCACAAAGCTGCTATGTATGGAATTCATGCAGTTAACTGTCCCACTCAGCCTGCTGCCATaGGGATTCGGCACGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: HEPCTKLLCMEFMQLTVPLSLLP*GFGTKR Trigger: CCTCTTCGTGCCGAATCCCCATGGCAGCAGGCTGAG...TGGGACAGTTAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CAA 90 bp | GAACATGGGCATGTGAGTGCAAGGCCCAGAGCTCAGAGGCATCATTaGCCCCTGGAGCTGAGGTTAACACATAGTTGTGAGCCATCTAAT | + |
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Preference number: 2 (lower is better) Translates to: EHGHVSARPRAQRHH*PLELRLTHSCEPSN Trigger: ATTAGATGGCTCACAACTATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGCACTCACATGCCCATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGGTTCAGGCCACACAGGTGGCACAGGAGTGATGGTGGCTGCACCCCAAGGAAAACCAGACATTTCTaGAATGGCTCTCATTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TWFRPHRWHRSDGGCTPRKTRHF*NGSHFL Trigger: CAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTT...CCTTGGGGTGCAGCCACCATCACTCCTGTGCCACCTGTGTGGCCTGAACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR GCA 90 bp | CACGAACCCTGCACAAAGCTGCTATGTATGGAATTCATGCAGTTAACTGTCCCACCTTGGAGACATCACTaGAGGCCAAGTGCACACCCT | + |
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Preference number: 2 (lower is better) Translates to: HEPCTKLLCMEFMQLTVPPWRHH*RPSAHP Trigger: AGGGTGTGCACTTGGCCTGCAGTGATGTCTCCAAGG...TGGGACAGTTAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR GCA 90 bp | TATACAGGTCACCAGAGTACCCCAAGCATCTTCCCCTACACTGCCATGGCCATTAAGGCCCAGAACCACTaGTTTTCTTCTGTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: YTGHQSTPSIFPYTAMAIKAQNH*FSSVWV Trigger: AACCCAGACAGAAGAAAAGCAGTGGTTCTGGGCCTT...AATGGCCATGGCAGTGTAGGGGAAGATGCTTGGGGTACTCTGGTGACCTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | GAATACAGAGCAGACGGTGGTTCTTTTCTGTCACAGGACAGAATTTTCTGGAATGAAGGAGCTGGTGTGTaGCACCCACAGGAGACTCGC | + |
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Preference number: 2 (lower is better) Translates to: EYRADGGSFLSQDRIFWNEGAGV*HPQETR Trigger: GCGAGTCTCCTGTGGGTGCCACACACCAGCTCCTTC...ATTCCAGAAAATTCTGTCCTGTGACAGAAAAGAACCACCGTCTGCTCTGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | CATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCTTTTAAACACTGCAGGTCCTCATGCCTGTaGGGCAAGTGCTTTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: HTMVRTETYISNSPFKHCRSSCL*GKCFPH Trigger: GTGGGGAAAGCACTTGCCCCACAGGCATGAGGACCT...GCAGTGTTTAAAAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATATGGCTCTCATTTCTTaGTGCTCTTCTTGGGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: ARPRAQRHHLPLELRLTHMALIS*CSSWEL Trigger: TAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCAT...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGGGAGTTAAAAGTGAATCCAGCCAGGGCTCCACAGTaGGACACTGCCTCAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: SEMALISWCSSWELKVNPARAPQ*DTASNH Trigger: GTGGTTTGAGGCAGTGTCTCACTGTGGAGCCCTGGC...TGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR-3UTR GCA 90 bp | CATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCTTTTAAACACTGCCCTTGGAGACATCACTaGAGGCCAAGTGCACACCCT | + |
|
Preference number: 2 (lower is better) Translates to: HTMVRTETYISNSPFKHCPWRHH*RPSAHP Trigger: AGGGTGTGCACTTGGCCTGCAGTGATGTCTCCAAGG...GCAGTGTTTAAAAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | GAATACAGAGCAGACGGTGGTTCTTTTCTGTCACAGGACAGAATTTTCTGGAATAGGTCCTCATGCCTGTaGGGCAAGTGCTTTCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: EYRADGGSFLSQDRIFWNRSSCL*GKCFPH Trigger: GTGGGGAAAGCACTTGCCCCACAGGCATGAGGACCT...ATTCCAGAAAATTCTGTCCTGTGACAGAAAAGAACCACCGTCTGCTCTGTATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | TATACAGGTCACCAGAGTACCCCAAGCATCTTCCCCTACACTGCCATGGCCATTTGGAACTTTCCAATATaGCTAGGCTGCTGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YTGHQSTPSIFPYTAMAIWNFPI*LGCWSE Trigger: TTCTGACCAGCAGCCTAGCCATATTGGAAAGTTCCA...AATGGCCATGGCAGTGTAGGGGAAGATGCTTGGGGTACTCTGGTGACCTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTGGTCCTCTGCAGAGAGACCATGAAAGAGTGCTaGGAAGTGGAAGTACAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EPSNMGGAGNQTLVLCRETMKEC*EVEVQK Trigger: CTTTTGTACTTCCACTTCCCAGCACTCTTTCATGGT...CTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTGGTCCTCTGCAGAGAGGCTCTCATTTCTTGGTaGTCTTCTTGGGAGTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: EPSNMGGAGNQTLVLCREALISW*SSWELK Trigger: TTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGC...CTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGACTGTGCCCAAAGGCACCTTATTACAAAAGCCATGGAGGGGAGAATACAGAAGCAGGAAAAGTGTTaGAGGACACGTCCCAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: VDCAQRHLITKAMEGRIQKQEKC*RTRPKI Trigger: GATCTTGGGACGTGTCCTCCAACACTTTTCCTGCTT...CTGTATTCTCCCCTCCATGGCTTTTGTAATAAGGTGCCTTTGGGCACAGTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | TATACAGGTCACCAGAGTACCCCAAGCATCTTCCCCTACACTGCCATGGCCATTATGGCTCTCATTTCTTaGTGCTCTTCTTGGGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: YTGHQSTPSIFPYTAMAIMALIS*CSSWEL Trigger: TAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCAT...AATGGCCATGGCAGTGTAGGGGAAGATGCTTGGGGTACTCTGGTGACCTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CAA 90 bp | ACCACCATGAAAGAGTGCTGGGAAGTGGAAGTACAAAAGATTGGTTaGTCTCAATGTCCCCACATAGCACCACTGCCTAGACCTTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TTMKECWEVEVQKIG*SQCPHIAPLPRPCS Trigger: AGAACAAGGTCTAGGCAGTGGTGCTATGTGGGGACATTGAGACAAACCAATCTTTTGTACTTCCACTTCCCAGCACTCTTTCATGGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGAACCCTGCACAAAGCTGCTATGTATGGAATTCATGCAGTTAACTGTCCCATCCACAGTGAGACACTaGCTCAAACCACAAAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: HEPCTKLLCMEFMQLTVPSTVRH*LKPQNS Trigger: GCTGTTTTGTGGTTTGAGGCAGTGTCTCACTGTGGA...TGGGACAGTTAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTATACCTCAAGTGTGTACCACCATGAAAGAGTGCTGGGAAGTGGAAGTACAAAAGGCCCAGAACCACTaGTTTTCTTCTGTCTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AIPQVCTTMKECWEVEVQKAQNH*FSSVWV Trigger: AACCCAGACAGAAGAAAAGCAGTGGTTCTGGGCCTT...TTGTACTTCCACTTCCCAGCACTCTTTCATGGTGGTACACACTTGAGGTATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGACTGTGCCCAAAGGCACCTTATTACAAAAGCCATGGAGGGGAGAATACAGTGGAACTTTCCAATATaGCTAGGCTGCTGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VDCAQRHLITKAMEGRIQWNFPI*LGCWSE Trigger: TTCTGACCAGCAGCCTAGCCATATTGGAAAGTTCCA...CTGTATTCTCCCCTCCATGGCTTTTGTAATAAGGTGCCTTTGGGCACAGTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGACTGTGCCCAAAGGCACCTTATTACAAAAGCCATGGAGGGGAGAATACAGAGCGTCTTTCTGGCCTaGAACTTTCCAATATGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VDCAQRHLITKAMEGRIQSVFLA*NFPIWL Trigger: TAGCCATATTGGAAAGTTCCAGGCCAGAAAGACGCT...CTGTATTCTCCCCTCCATGGCTTTTGTAATAAGGTGCCTTTGGGCACAGTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | TATACAGGTCACCAGAGTACCCCAAGCATCTTCCCCTACACTGCCATGGCCATTTCTTGGTGCTCTTCTTaGGAGTTAAAAGTGAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: YTGHQSTPSIFPYTAMAISWCSS*ELKVNP Trigger: TGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGA...AATGGCCATGGCAGTGTAGGGGAAGATGCTTGGGGTACTCTGGTGACCTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CAA 90 bp | AGACTCTTCTATAAAGACTCAGATGCAGAAGAAGCAGGAAAAGTGTaGGAGGACACGTCCCAAGATCAAAATCCAACAGGAAGGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RLFYKDSDAEEAGKV*EDTSQDQNPTGRSW Trigger: CCAGCTCCTTCCTGTTGGATTTTGATCTTGGGACGTGTCCTCCAACACTTTTCCTGCTTCTTCTGCATCTGAGTCTTTATAGAAGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATGGCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGAACTCAGGTCCTCATaGCTGTGGGGCAAGTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LWQNQTFLKWLSFLGALLELRSS*LWGKCF Trigger: AAAGCACTTGCCCCACAGGCATGAGGACCTGAGTTC...AAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGGGAGTTAAAAGTGAATCCAACCCCAAGAAGTTGCTaGACAGCCTCGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SEMALISWCSSWELKVNPTPRSC*TASCVC Trigger: ACACACACACGAGGCTGTCCAGCAACTTCTTGGGGT...TGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTGCATACCATGGGCCAAAGCCACCACTaGGGAGAGTTAAGCAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: AFNFQLRVISVETLLHTMGQSHH*GELSKS Trigger: GGACTTGCTTAACTCTCCTCAGTGGTGGCTTTGGCC...CATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGGGAGTTAAAAGTGAATCCAATATGGCTAGGCTGCTaGTCAGAAAGCCCTGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SEMALISWCSSWELKVNPIWLGC*SESPGD Trigger: ATCTCCAGGGCTTTCTGACCAGCAGCCTAGCCATAT...TGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTGCATACCATGGAACTCAGGTCCTCATaGCTGTGGGGCAAGTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AFNFQLRVISVETLLHTMELRSS*LWGKCF Trigger: AAAGCACTTGCCCCACAGGCATGAGGACCTGAGTTC...CATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGGGAGTTAAAAGTGAATCCACATGGTGAGGCTGGTTaGTTAAGTCAACCTTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SEMALISWCSSWELKVNPHGEAG*LSQPWR Trigger: TCTCCAAGGTTGACTTAAGCAACCAGCCTCACCATG...TGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATGGCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGAGGCAGCGTCTTTCTaGCCTGGAACTTTCCAATAT | + |
|
Preference number: 2 (lower is better) Translates to: LWQNQTFLKWLSFLGALLEAASF*PGTFQY Trigger: ATATTGGAAAGTTCCAGGCCAGAAAGACGCTGCCTC...AAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | CACGAACCCTGCACAAAGCTGCTATGTATGGAATTCATGCAGTTAACTGTCCCATCTTGGTGCTCTTCTTaGGAGTTAAAAGTGAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: HEPCTKLLCMEFMQLTVPSWCSS*ELKVNP Trigger: TGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGA...TGGGACAGTTAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTGCATACCATGAAGTGTGTACCACCATaGAAGAGTGCTGGGAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AFNFQLRVISVETLLHTMKCVPP*KSAGKW Trigger: CCACTTCCCAGCACTCTTTCATGGTGGTACACACTT...CATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR GCA 90 bp | CATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCTTTTAAACACTGCGCTCTCATTTCTTGGTaGTCTTCTTGGGAGTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HTMVRTETYISNSPFKHCALISW*SSWELK Trigger: TTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGC...GCAGTGTTTAAAAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGGGAGTTAAAAGTGAATCCAAGCGTCTTTCTGGCCTaGAACTTTCCAATATGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SEMALISWCSSWELKVNPSVFLA*NFPIWL Trigger: TAGCCATATTGGAAAGTTCCAGGCCAGAAAGACGCT...TGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | CATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCTTTTAAACACTGCCAGACATTTCTGAAATaGCTCTCATTTCTTGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HTMVRTETYISNSPFKHCQTFLK*LSFLGA Trigger: AGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTG...GCAGTGTTTAAAAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | CATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCTTTTAAACACTGCGGAAGTACAAAAGATTaGTTTGTCTCAATGTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HTMVRTETYISNSPFKHCGSTKD*FVSMSP Trigger: TGGGGACATTGAGACAAACCAATCTTTTGTACTTCC...GCAGTGTTTAAAAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CAA 90 bp | TGTGCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATaGCATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: CAFNFQLRVISVETL*HTMVRTETYISNSP Trigger: AGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATGGCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTTTATTACAAAAGCCATaGAGGGGAGAATACAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LWQNQTFLKWLSFLGALLLLQKP*RGEYRA Trigger: TGCTCTGTATTCTCCCCTCCATGGCTTTTGTAATAA...AAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTGCATACCATGTTATTACAAAAGCCATaGAGGGGAGAATACAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AFNFQLRVISVETLLHTMLLQKP*RGEYRA Trigger: TGCTCTGTATTCTCCCCTCCATGGCTTTTGTAATAA...CATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | GAGAACAGAGTGAGTAGAACCCACCCCTGCCTCCCATaGCAGCTAGAGGCCACGAACCCTGCACAAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ENRVSRTHPCLP*QLEATNPAQSC Trigger: GCAGCTTTGTGCAGGGTTCGTGGCCTCTAGCTGTCATGGGAGGCAGGGGTGGGTTCTACTCACTCTGTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | GCCAGGCATGCGGAGTCCTGGCATGGTGAGGCTGGTTaGTTAAGTCAACCTTGGAGACATCACTGCAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ARHAESWHGEAG*LSQPWRHHCRP Trigger: TGGCCTGCAGTGATGTCTCCAAGGTTGACTTAAGCAACCAGCCTCACCATGCCAGGACTCCGCATGCCTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | CTGCTCCACAAAGTGCTGAGGACACCCTCAGCCTGCTaGCATGGGGATTCGGCACGAAGAGGAGAAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLHKVLRTPSAC*HGDSARRGEAS Trigger: AGAAGCTTCTCCTCTTCGTGCCGAATCCCCATGGCAGCAGGCTGAGGGTGTCCTCAGCACTTTGTGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | CCACAAAGTGCTGAGGACACCCTCAGCCTGCTGCCATaGGGATTCGGCACGAAGAGGAGAAGCTTCTATGGC | + |
|
Preference number: 3 (lower is better) Translates to: PQSAEDTLSLLP*GFGTKRRSFYG Trigger: GCCATAGAAGCTTCTCCTCTTCGTGCCGAATCCCCATGGCAGCAGGCTGAGGGTGTCCTCAGCACTTTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATAAAGTGAATCCACGCTaGGGAGGCAGAGTCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARPRAQRHHLPLELRLTHKVNPR*GGRVRG Trigger: CCCCCTGACTCTGCCTCCCAAGCGTGGATTCACTTT...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | GAATCCACGCTTGGGAGGCAGAGTCAGGGGGATCACTaGGTTCAAGGCCAGTGTGGTCTACAGGGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESTLGRQSQGDH*VQGQCGLQGEF Trigger: GAACTCACCCTGTAGACCACACTGGCCTTGAACTCAGTGATCCCCCTGACTCTGCCTCCCAAGCGTGGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | TTTCTGCTCCACAAAGTGCTGAGGACACCCTCAGCCTaGTGCCATGGGGATTCGGCACGAAGAGGAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLLHKVLRTPSA*CHGDSARRGEA Trigger: AGCTTCTCCTCTTCGTGCCGAATCCCCATGGCAGCAGGCTGAGGGTGTCCTCAGCACTTTGTGGAGCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | GTCCTGGAGAGGTTTAGCACAGGCCAAAGCCACCACTaGGGAGAGTTAAGCAAGTCCTCAGGCCTTGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: VLERFSTGQSHH*GELSKSSGLEP Trigger: GGGTTCAAGGCCTGAGGACTTGCTTAACTCTCCTCAGTGGTGGCTTTGGCCTGTGCTAAACCTCTCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | GAGTTCCATGACAGCCAGGGCTCCACAGTGAGACACTaGCTCAAACCACAAAACAGCCTGAAGCCAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: EFHDSQGSTVRH*LKPQNSLKPGM Trigger: CATGCCTGGCTTCAGGCTGTTTTGTGGTTTGAGGCAGTGTCTCACTGTGGAGCCCTGGCTGTCATGGAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | ACCACAAAACAGCCTGAAGCCAGGCATGCGGAGTCCTaGCATGGTGAGGCTGGTTGCTTAAGTCAACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TTKQPEARHAES*HGEAGCLSQPW Trigger: CCAAGGTTGACTTAAGCAACCAGCCTCACCATGCCAGGACTCCGCATGCCTGGCTTCAGGCTGTTTTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | CTGGTCCTCTGCAGAGAGGTTCAGGCTCCTAATCACTaGACCATTCCCCAGCCCGCCCAGTGTGCTTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVLCREVQAPNH*TIPQPAQCAFN Trigger: ATTAAAAGCACACTGGGCGGGCTGGGGAATGGTCCAGTGATTAGGAGCCTGAACCTCTCTGCAGAGGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | GAGGCTGGTTGCTTAAGTCAACCTTGGAGACATCACTaGAGGCCAAGTGCACACCCTTCCTCCATAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: EAGCLSQPWRHH*RPSAHPSSIAS Trigger: GGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTCCAAGGTTGACTTAAGCAACCAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | ACTCCACTAAACCAGGCCCGAGGGGTTCTTGGCAAGTaGTCTTCTATTGAATTGTGGCCCCAGCTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: TPLNQARGVLGK*SSIELWPQLLT Trigger: AGTGAGGAGCTGGGGCCACAATTCAATAGAAGAGCACTTGCCAAGAACCCCTCGGGCCTGGTTTAGTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | TGTGTGGGTGTGGGTGTGAGGCCAGAGGTGAACTTCTaGTGTCCCTCCACAGAAAGTGTCCACCTTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CVGVGVRPEVNF*CPSTESVHLGF Trigger: AAAACCAAGGTGGACACTTTCTGTGGAGGGACATCAGAAGTTCACCTCTGGCCTCACACCCACACCCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | CCCCTGCCTCCCATGACAGCTAGAGGCCACGAACCCTaGACAAAGCTGCTATGTATGGAATTCATGCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PLPPMTARGHEP*TKLLCMEFMQL Trigger: TAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTGGCCTCTAGCTGTCATGGGAGGCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | CTTTCCAATATGGCTAGGCTGCTGGTCAGAAAGCCCTaGAGATTTTCCTCTCACCACCTCCCAAGTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSNMARLLVRKP*RFSSHHLPSAE Trigger: CTCAGCACTTGGGAGGTGGTGAGAGGAAAATCTCCAGGGCTTTCTGACCAGCAGCCTAGCCATATTGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTGGTCCTCTGCAGAGAGGAAGCAGGAAAAGTGTaGGAGGACACGTCCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EPSNMGGAGNQTLVLCREEAGKV*EDTSQD Trigger: ATCTTGGGACGTGTCCTCCAACACTTTTCCTGCTTC...CTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACCCCAAGAAGTTGCTGGACGAAGCAGGAAAAGTGTaGGAGGACACGTCCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NPAAVCYGNLTHPKKLLDEAGKV*EDTSQD Trigger: ATCTTGGGACGTGTCCTCCAACACTTTTCCTGCTTC...GTCCAGCAACTTCTTGGGGTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CAA 90 bp | CACGAACCCTGCACAAAGCTGCTATGTATGGAATTCATGCAGTTAACTGTCCCAGCACCCCGTCCACTCTaGTTCTTGGGGACCATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HEPCTKLLCMEFMQLTVPAPRPL*FLGTMS Trigger: ACTCATGGTCCCCAAGAACAAGAGTGGACGGGGTGC...TGGGACAGTTAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | GGAGATTTTCCTCTCACCACCTCCCAAGTGCTGAGATaGCAAGTGTACACCAGTCACATCCAGTTCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GDFPLTTSQVLR*QVYTSHIQFWG Trigger: TCCCCAGAACTGGATGTGACTGGTGTACACTTGTCATCTCAGCACTTGGGAGGTGGTGAGAGGAAAATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | GCCCTGGAGATTTTCCTCTCACCACCTCCCAAGTGCTaGGATGACAAGTGTACACCAGTCACATCCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALEIFLSPPPKC*DDKCTPVTSSS Trigger: AGAACTGGATGTGACTGGTGTACACTTGTCATCTCAGCACTTGGGAGGTGGTGAGAGGAAAATCTCCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | CGTCCACTCTTGTTCTTGGGGACCATGAGTAGACTGTaGCCAAAGGCACCTTATTACAAAAGCCATGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPLLFLGTMSRL*PKAPYYKSHGG Trigger: CCCTCCATGGCTTTTGTAATAAGGTGCCTTTGGGCACAGTCTACTCATGGTCCCCAAGAACAAGAGTGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | AATATGGGTGGTGCTGGGAACCAAACTCTGGTCCTCTaGAGAGAGGTTCAGGCTCCTAATCACTGGACCATT | + |
|
Preference number: 3 (lower is better) Translates to: NMGGAGNQTLVL*REVQAPNHWTI Trigger: AATGGTCCAGTGATTAGGAGCCTGAACCTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | TTTCTGGCCTGGAACTTTCCAATATGGCTAGGCTGCTaGTCAGAAAGCCCTGGAGATTTTCCTCTCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: FLAWNFPIWLGC*SESPGDFPLTT Trigger: GGTGGTGAGAGGAAAATCTCCAGGGCTTTCTGACCAGCAGCCTAGCCATATTGGAAAGTTCCAGGCCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | AGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTaGTCCTCTGCAGAGAGGTTCAGGCTCCTAATCACT | + |
|
Preference number: 3 (lower is better) Translates to: SHLIWVVLGTKL*SSAERFRLLIT Trigger: AGTGATTAGGAGCCTGAACCTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | CTTCCGAATTCATGTTTAAGAACATGGGCATGTGAGTaGAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPNSCLRTWACE*KAQSSEASFAP Trigger: AGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGCACTCACATGCCCATGTTCTTAAACATGAATTCGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | CTGTCACAGGACAGAATTTTCTGGAATACCAAGTCCTaGAGAGGTTTAGCACAGGCCAAAGCCACCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSQDRIFWNTKS*RGLAQAKATTE Trigger: CTCAGTGGTGGCTTTGGCCTGTGCTAAACCTCTCCAGGACTTGGTATTCCAGAAAATTCTGTCCTGTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATGTACAAAAGATTGGTTaGTCTCAATGTCCCCACATA | + |
|
Preference number: 3 (lower is better) Translates to: ARPRAQRHHLPLELRLTHVQKIG*SQCPHI Trigger: TATGTGGGGACATTGAGACAAACCAATCTTTTGTAC...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | TTTGCCACTGTACTTCCGAATTCATGTTTAAGAACATaGGCATGTGAGTGCAAGGCCCAGAGCTCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FATVLPNSCLRT*ACECKAQSSEA Trigger: TGCCTCTGAGCTCTGGGCCTTGCACTCACATGCCCATGTTCTTAAACATGAATTCGGAAGTACAGTGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | TGTACTTCCGAATTCATGTTTAAGAACATGGGCATGTaGGTGCAAGGCCCAGAGCTCAGAGGCATCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CTSEFMFKNMGM*VQGPELRGIIC Trigger: GCAAATGATGCCTCTGAGCTCTGGGCCTTGCACTCACATGCCCATGTTCTTAAACATGAATTCGGAAGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | GCCATGGGGATTCGGCACGAAGAGGAGAAGCTTCTATaGCAAAACCAGACATTTCTGAAATGGCTCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: AMGIRHEEEKLL*QNQTFLKWLSF Trigger: AAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAGAAGCTTCTCCTCTTCGTGCCGAATCCCCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTGCATACCATGAAAGTGAATCCACGCTaGGGAGGCAGAGTCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AFNFQLRVISVETLLHTMKVNPR*GGRVRG Trigger: CCCCCTGACTCTGCCTCCCAAGCGTGGATTCACTTT...CATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTATACCTCAAGTGTGTACCACCATGAAAGAGTGCTGGGAAGTGGAAGTACAATTCTTGGTGCTCTTCTaGGGAGTTAAAAGTGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: AIPQVCTTMKECWEVEVQFLVLF*GVKSES Trigger: GGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAA...TTGTACTTCCACTTCCCAGCACTCTTTCATGGTGGTACACACTTGAGGTATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | ATTTCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTaGGAGTTAAAAGTGAATCCACGCTTGGGAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISEMALISWCSS*ELKVNPRLGGR Trigger: TCTGCCTCCCAAGCGTGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR TCA 72 bp | AAGAGGAGAAGCTTCTATGGCAAAACCAGACATTTCTaGAATGGCTCTCATTTCTTGGTGCTCTTCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KRRSFYGKTRHF*NGSHFLVLFLG Trigger: TCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAGAAGCTTCTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | GCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTaGTGCTCTTCTTGGGAGTTAAAAGTGAATCCACGC | + |
|
Preference number: 3 (lower is better) Translates to: AKPDISEMALIS*CSSWELKVNPR Trigger: GCGTGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | GCTATACCTCAAGTGTGTACCACCATGAAAGAGTGCTaGGAAGTGGAAGTACAAAAGATTGGTTTGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AIPQVCTTMKEC*EVEVQKIGLSQ Trigger: TTGAGACAAACCAATCTTTTGTACTTCCACTTCCCAGCACTCTTTCATGGTGGTACACACTTGAGGTATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | TTAGAGTCATCTCAGTGGAAACACTATTGCATACCATaGTTAGGACGGAGACGTATATATCCAACTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LESSQWKHYCIP*LGRRRIYPTPL Trigger: AAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR GCA 72 bp | AAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTaGTCTTCTTGGGAGTTAAAAGTGAATCCACGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KPDISEMALISW*SSWELKVNPRL Trigger: CAAGCGTGGATTCACTTTTAACTCCCAAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CCA 72 bp | AGTGTGCTTTTAATTTCCAACTTAGAGTCATCTCAGTaGAAACACTATTGCATACCATGGTTAGGACGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVLLISNLESSQ*KHYCIPWLGRR Trigger: TCTCCGTCCTAACCATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR TCA 90 bp | GAGACATCACTGCAGGCCAAGTGCACACCCTTCCTCCATAGCATCCCCAGCCAGAAGTTGCCATGGCACTaGGCACACGCCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETSLQAKCTPFLHSIPSQKLPWH*AHASCS Trigger: GCTGCAGCTGGCGTGTGCTCAGTGCCATGGCAACTT...CTGGCTGGGGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATACTTCACTGTGCGCCTaGGCCGCTGGGCCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ARPRAQRHHLPLELRLTHTSLCA*AAGPAN Trigger: GTTGGCTGGCCCAGCGGCTCAGGCGCACAGTGAAGT...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTTCAGGCCACACAGGTGGCACAGGAGTGATGGTGGCTGCACCCCAAGGCCAACTGACTCCCGATaGCTTCTGCTCAGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWFRPHRWHRSDGGCTPRPTDSR*LLLSSS Trigger: AGAGCTGCTGAGCAGAAGCCATCGGGAGTCAGTTGG...CCTTGGGGTGCAGCCACCATCACTCCTGTGCCACCTGTGTGGCCTGAACCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CAA 72 bp | ACCAGGCCCGAGGGGTTCTTGGCAAGTGCTCTTCTATaGAATTGTGGCCCCAGCTCCTCACTGGTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRPEGFLASALL*NCGPSSSLVGS Trigger: AGAGCCCACCAGTGAGGAGCTGGGGCCACAATTCAATAGAAGAGCACTTGCCAAGAACCCCTCGGGCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | GAGACATCACTGCAGGCCAAGTGCACACCCTTCCTCCATAGCATCCCCAGCCAGACTCCCGATGGCTTCTaGTCAGCAGCTCTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETSLQAKCTPFLHSIPSQTPDGF*SAALDV Trigger: TACATCCAGAGCTGCTGAGCAGAAGCCATCGGGAGT...CTGGCTGGGGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR TCA 90 bp | ACATCCAGTTCTGGGGATGAACTCAGGTCCTCATGCCTGTGGGGCAAGTGCTTTCTGTTCCTCCCAGGGTaGAAGGTGCAATCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSSSGDELRSSCLWGKCFLFLPG*KVQSLS Trigger: GGACAGAGATTGCACCTTTCACCCTGGGAGGAACAG...AAAGCACTTGCCCCACAGGCATGAGGACCTGAGTTCATCCCCAGAACTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTGGTCCTCTGCAGAGAGCTGTTCCTCCCAGGGTaGAAGGTGCAATCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPSNMGGAGNQTLVLCRELFLPG*KVQSLS Trigger: GGACAGAGATTGCACCTTTCACCCTGGGAGGAACAG...CTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | AACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACCCCAAGAAGTTGCTGGACCTCTGCTGGCTGAGCTaGTCCCAGCCTGGCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPAAVCYGNLTHPKKLLDLCWLS*SQPGNC Trigger: ACAATTGCCAGGCTGGGAGCAGCTCAGCCAGCAGAG...GTCCAGCAACTTCTTGGGGTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATACTCCCGATGGCTTCTaGTCAGCAGCTCTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARPRAQRHHLPLELRLTHTPDGF*SAALDV Trigger: TACATCCAGAGCTGCTGAGCAGAAGCCATCGGGAGT...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGAGGACACGTCCCAAGATCAAAATCCAACAGGAAGGAGCTGGTGTGTGCCAGCCTGGCAATTGTaGTCCAGAGGATGCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLEDTSQDQNPTGRSWCVPAWQL*SRGCLC Trigger: GCACAGGCATCCTCTGGACCACAATTGCCAGGCTGG...CACACACCAGCTCCTTCCTGTTGGATTTTGATCTTGGGACGTGTCCTCCAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR CCA 90 bp | ACATCCAGTTCTGGGGATGAACTCAGGTCCTCATGCCTGTGGGGCAAGTGCTTTCCAACTGACTCCCGATaGCTTCTGCTCAGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSSGDELRSSCLWGKCFPTDSR*LLLSSS Trigger: AGAGCTGCTGAGCAGAAGCCATCGGGAGTCAGTTGG...AAAGCACTTGCCCCACAGGCATGAGGACCTGAGTTCATCCCCAGAACTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| 3UTR CAA 72 bp | CATGTGAGTGCAAGGCCCAGAGCTCAGAGGCATCATTaGCCCCTGGAGCTGAGGTTAACACATAGTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HVSARPRAQRHH*PLELRLTHSCE Trigger: CTCACAACTATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGCACTCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGCCCAGAGCTCAGAGGCATCATTTGCCCCTGGAGCTGAGGTTAACACATTTTGCAAGTTGGTTCTaGACAGTGCTTCCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARPRAQRHHLPLELRLTHFASWF*TVLPQV Trigger: GACTTGGGGAAGCACTGTTCAGAACCAACTTGCAAA...ATGTGTTAACCTCAGCTCCAGGGGCAAATGATGCCTCTGAGCTCTGGGCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR TCA 90 bp | GAATACAGAGCAGACGGTGGTTCTTTTCTGTCACAGGACAGAATTTTCTGGAATACTTCACTGTGCGCCTaGGCCGCTGGGCCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EYRADGGSFLSQDRIFWNTSLCA*AAGPAN Trigger: GTTGGCTGGCCCAGCGGCTCAGGCGCACAGTGAAGT...ATTCCAGAAAATTCTGTCCTGTGACAGAAAAGAACCACCGTCTGCTCTGTATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCCTCAGGCCTTGAACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACTCCCAGGGTGAAAGGTaGAATCTCTGTCCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPQALNPAAVCYGNLTHSQGER*NLCPCA Trigger: AGCACATGGACAGAGATTGCACCTTTCACCCTGGGA...GTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTTCAAGGCCTGAGGACTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGGAGGACACGTCCCAAGATCAAAATCCAACAGGAAGGAGCTGGTGTGTGGCATCTCCTTCTTCCTaGATCCCTCTTTGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLEDTSQDQNPTGRSWCVASPSS*IPLWSS Trigger: GCTGCTCCAAAGAGGGATGCAGGAAGAAGGAGATGC...CACACACCAGCTCCTTCCTGTTGGATTTTGATCTTGGGACGTGTCCTCCAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | TATACAGGTCACCAGAGTACCCCAAGCATCTTCCCCTACACTGCCATGGCCATTGCTGAATGCAGAAGTTaGCATGGCACTGAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: YTGHQSTPSIFPYTAMAIAECRS*HGTEHT Trigger: CGTGTGCTCAGTGCCATGGCAACTTCTGCATTCAGC...AATGGCCATGGCAGTGTAGGGGAAGATGCTTGGGGTACTCTGGTGACCTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGGAGGACACGTCCCAAGATCAAAATCCAACAGGAAGGAGCTGGTGTGTGGCTGAATGCAGAAGTTaGCATGGCACTGAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: VLEDTSQDQNPTGRSWCVAECRS*HGTEHT Trigger: CGTGTGCTCAGTGCCATGGCAACTTCTGCATTCAGC...CACACACCAGCTCCTTCCTGTTGGATTTTGATCTTGGGACGTGTCCTCCAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | GTAGACTGTGCCCAAAGGCACCTTATTACAAAAGCCATGGAGGGGAGAATACAGCTCTGCTGGCTGAGCTaGTCCCAGCCTGGCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VDCAQRHLITKAMEGRIQLCWLS*SQPGNC Trigger: ACAATTGCCAGGCTGGGAGCAGCTCAGCCAGCAGAG...CTGTATTCTCCCCTCCATGGCTTTTGTAATAAGGTGCCTTTGGGCACAGTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATCTAATATGGGTGGTGCTGGGAACCAAACTCTGGTCCTCTGCAGAGAGGTTGGTTCTGAACAGTaGTTCCCCAAGTCAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EPSNMGGAGNQTLVLCREVGSEQ*FPKSGN Trigger: GTTTCCTGACTTGGGGAAGCACTGTTCAGAACCAAC...CTCTCTGCAGAGGACCAGAGTTTGGTTCCCAGCACCACCCATATTAGATGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR GCA 90 bp | TATACAGGTCACCAGAGTACCCCAAGCATCTTCCCCTACACTGCCATGGCCATTTCCCAGGGTGAAAGGTaGAATCTCTGTCCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTGHQSTPSIFPYTAMAISQGER*NLCPCA Trigger: AGCACATGGACAGAGATTGCACCTTTCACCCTGGGA...AATGGCCATGGCAGTGTAGGGGAAGATGCTTGGGGTACTCTGGTGACCTGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
||
| CDS-3UTR CCA 90 bp | CATACCATGGTTAGGACGGAGACGTATATATCCAACTCCCCTTTTAAACACTGCCCAGCCTGGCAATTGTaGTCCAGAGGATGCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTMVRTETYISNSPFKHCPAWQL*SRGCLC Trigger: GCACAGGCATCCTCTGGACCACAATTGCCAGGCTGG...GCAGTGTTTAAAAGGGGAGTTGGATATATACGTCTCCGTCCTAACCATGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| 3UTR CAA 72 bp | CTGATGTCCCTCCACAGAAAGTGTCCACCTTGGTTTTaGAGGCAGCGTCTTTCTGGCCTGGAACTTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LMSLHRKCPPWF*RQRLSGLELSN Trigger: ATTGGAAAGTTCCAGGCCAGAAAGACGCTGCCTCAAAAACCAAGGTGGACACTTTCTGTGGAGGGACATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR TCA 90 bp | AGAACCACTGCTTTTCTTCTGTCTGGGTTTCTGCTCCACAAAGTGCTGAGGACATTTGCAAGTTGGTTCTaGACAGTGCTTCCCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RTTAFLLSGFLLHKVLRTFASWF*TVLPQV Trigger: GACTTGGGGAAGCACTGTTCAGAACCAACTTGCAAA...TGTCCTCAGCACTTTGTGGAGCAGAAACCCAGACAGAAGAAAAGCAGTGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR TCA 90 bp | CACGAACCCTGCACAAAGCTGCTATGTATGGAATTCATGCAGTTAACTGTCCCATGGAGCAGCGATGTGTaGAAACCTTGTTTCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: HEPCTKLLCMEFMQLTVPWSSDV*KPCFCS Trigger: GGAACAGAAACAAGGTTTTCACACATCGCTGCTCCA...TGGGACAGTTAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR TCA 90 bp | GCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTGCATACCATGAAGTTGCCATGGCACTaGGCACACGCCAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AFNFQLRVISVETLLHTMKLPWH*AHASCS Trigger: GCTGCAGCTGGCGTGTGCTCAGTGCCATGGCAACTT...CATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR GCA 90 bp | AGAAGCAGGAAAAGTGTTGGAGGACACGTCCCAAGATCAAAATCCAACAGGAAGGTTGGTTCTGAACAGTaGTTCCCCAAGTCAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: RSRKSVGGHVPRSKSNRKVGSEQ*FPKSGN Trigger: GTTTCCTGACTTGGGGAAGCACTGTTCAGAACCAAC...CTTCCTGTTGGATTTTGATCTTGGGACGTGTCCTCCAACACTTTTCCTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR GCA 90 bp | GAATACAGAGCAGACGGTGGTTCTTTTCTGTCACAGGACAGAATTTTCTGGAATGGACACACAGGCACCTaGACATCCTTCTTGAACGCA | + |
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Preference number: 4 (lower is better) Translates to: EYRADGGSFLSQDRIFWNGHTGT*TSFLNA Trigger: TGCGTTCAAGAAGGATGTGCAGGTGCCTGTGTGTCC...ATTCCAGAAAATTCTGTCCTGTGACAGAAAAGAACCACCGTCTGCTCTGTATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR GCA 90 bp | AACCCTGCAGCTGTTTGCTATGGTAACCTAACCCACCCCAAGAAGTTGCTGGACGAAAATCTAGCTGTTTaGAAGTTGGTTCTGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: NPAAVCYGNLTHPKKLLDENLAV*KLVLNS Trigger: ACTGTTCAGAACCAACTTGCAAACAGCTAGATTTTC...GTCCAGCAACTTCTTGGGGTGGGTTAGGTTACCATAGCAAACAGCTGCAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR GCA 90 bp | TATACAGGTCACCAGAGTACCCCAAGCATCTTCCCCTACACTGCCATGGCCATTGAAAATCTAGCTGTTTaGAAGTTGGTTCTGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: YTGHQSTPSIFPYTAMAIENLAV*KLVLNS Trigger: ACTGTTCAGAACCAACTTGCAAACAGCTAGATTTTC...AATGGCCATGGCAGTGTAGGGGAAGATGCTTGGGGTACTCTGGTGACCTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR GCA 90 bp | CTATGGCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGCATCTCCTTCTTCCTaGATCCCTCTTTGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LWQNQTFLKWLSFLGALLASPSS*IPLWSS Trigger: GCTGCTCCAAAGAGGGATGCAGGAAGAAGGAGATGC...AAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS GCA 90 bp | GTGCGCCTGAGCCGCTGGGCCAGCCAACTGACTCCCGATGGCTTCTaGTCAGCAGCTCTGGATGTAGAAGTCCTCCCTCTGCTGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VRLSRWASQLTPDGF*SAALDVEVLPLLAE Trigger: CTCAGCCAGCAGAGGGAGGACTTCTACATCCAGAGCTGCTGAGCAGAAGCCATCGGGAGTCAGTTGGCTGGCCCAGCGGCTCAGGCGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR CAA 90 bp | GAGACATCACTGCAGGCCAAGTGCACACCCTTCCTCCATAGCATCCCCAGCCAGCTCCCAGCCTGGCAATaGTGGTCCAGAGGATGCCTG | + |
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Preference number: 5 (lower is better) Translates to: ETSLQAKCTPFLHSIPSQLPAWQ*WSRGCL Trigger: CAGGCATCCTCTGGACCACAATTGCCAGGCTGGGAG...CTGGCTGGGGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS CCA 90 bp | GTGAAAGGTGCAATCTCTGTCCATGTGCTCGCCGACCACCACATCTaGGATCTCACCTCTCTTCACAGGGATGGGGGCATTGCAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: VKGAISVHVLADHHI*DLTSLHRDGGIAER Trigger: CCTCTCTGCAATGCCCCCATCCCTGTGAAGAGAGGTGAGATCCCAGATGTGGTGGTCGGCGAGCACATGGACAGAGATTGCACCTTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 ENSMUST00000150992.2 |
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| CDS-3UTR CAA 90 bp | GAGACATCACTGCAGGCCAAGTGCACACCCTTCCTCCATAGCATCCCCAGCCAGGTCTTTACAGAAATCTaGTTTACAGGCGTCGCATGT | + |
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Preference number: 5 (lower is better) Translates to: ETSLQAKCTPFLHSIPSQVFTEI*FTGVAC Trigger: ACATGCGACGCCTGTAAACAAGATTTCTGTAAAGAC...CTGGCTGGGGATGCTATGGAGGAAGGGTGTGCACTTGGCCTGCAGTGATGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS TCA 90 bp | GCAGCATCTCCTTCTTCCTGCATCCCTCTTTGGAGCAGCGATGTGTaGAAACCTTGTTTCTGTTCCTCCCAGGGTGAAAGGTGCAATCTC | + |
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Preference number: 5 (lower is better) Translates to: AASPSSCIPLWSSDV*KPCFCSSQGERCNL Trigger: GAGATTGCACCTTTCACCCTGGGAGGAACAGAAACAAGGTTTTCACACATCGCTGCTCCAAAGAGGGATGCAGGAAGAAGGAGATGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR CAA 90 bp | CACGAACCCTGCACAAAGCTGCTATGTATGGAATTCATGCAGTTAACTGTCCCAAGGCGTCGCATGTTATaGGCAGAAAATCTAGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: HEPCTKLLCMEFMQLTVPRRRML*AENLAV Trigger: AACAGCTAGATTTTCTGCCAATAACATGCGACGCCT...TGGGACAGTTAACTGCATGAATTCCATACATAGCAGCTTTGTGCAGGGTTCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR CAA 90 bp | CTATGGCAAAACCAGACATTTCTGAAATGGCTCTCATTTCTTGGTGCTCTTCTTGTCTTTACAGAAATCTaGTTTACAGGCGTCGCATGT | + |
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Preference number: 5 (lower is better) Translates to: LWQNQTFLKWLSFLGALLVFTEI*FTGVAC Trigger: ACATGCGACGCCTGTAAACAAGATTTCTGTAAAGAC...AAGAAGAGCACCAAGAAATGAGAGCCATTTCAGAAATGTCTGGTTTTGCCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS-3UTR CAA 90 bp | GCTTTTAATTTCCAACTTAGAGTCATCTCAGTGGAAACACTATTGCATACCATGAGGCGTCGCATGTTATaGGCAGAAAATCTAGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: AFNFQLRVISVETLLHTMRRRML*AENLAV Trigger: AACAGCTAGATTTTCTGCCAATAACATGCGACGCCT...CATGGTATGCAATAGTGTTTCCACTGAGATGACTCTAAGTTGGAAATTAAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS GCA 72 bp | AGCCGCTGGGCCAGCCAACTGACTCCCGATGGCTTCTaGTCAGCAGCTCTGGATGTAGAAGTCCTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRWASQLTPDGF*SAALDVEVLPL Trigger: CAGAGGGAGGACTTCTACATCCAGAGCTGCTGAGCAGAAGCCATCGGGAGTCAGTTGGCTGGCCCAGCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS CAA 90 bp | ACCACCACATCTGGGATCTCACCTCTCTTCACAGGGATGGGGGCATaGCAGAGAGGACACACAGGCACCTGCACATCCTTCTTGAACGCA | + |
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Preference number: 6 (lower is better) Translates to: TTTSGISPLFTGMGA*QRGHTGTCTSFLNA Trigger: TGCGTTCAAGAAGGATGTGCAGGTGCCTGTGTGTCCTCTCTGCAATGCCCCCATCCCTGTGAAGAGAGGTGAGATCCCAGATGTGGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 ENSMUST00000150992.2 |
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| CDS TCA 72 bp | CGATGTGTGAAAACCTTGTTTCTGTTCCTCCCAGGGTaGAAGGTGCAATCTCTGTCCATGTGCTCGCCGACC | + |
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Preference number: 6 (lower is better) Translates to: RCVKTLFLFLPG*KVQSLSMCSPT Trigger: GGTCGGCGAGCACATGGACAGAGATTGCACCTTTCACCCTGGGAGGAACAGAAACAAGGTTTTCACACATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 |
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| CDS TCA 72 bp | TGCAGAGAGGACACACAGGCACCTGCACATCCTTCTTaGACGCAAAGGGACACTTATGACCCACGTAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CREDTQAPAHPS*TQRDTYDPRRK Trigger: TTTCCTACGTGGGTCATAAGTGTCCCTTTGCGTTCAAGAAGGATGTGCAGGTGCCTGTGTGTCCTCTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 ENSMUST00000150992.2 |
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| CDS CAA 72 bp | CAGGCGTCGCATGTTATTGGCAGAAAATCTAGCTGTTaGCAAGTTGGTTCTGAACAGTGCTTCCCCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: QASHVIGRKSSC*QVGSEQCFPKS Trigger: TGACTTGGGGAAGCACTGTTCAGAACCAACTTGCAAACAGCTAGATTTTCTGCCAATAACATGCGACGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 ENSMUST00000150992.2 |
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| CDS CAA 72 bp | CTTTACAGAAATCTTGTTTACAGGCGTCGCATGTTATaGGCAGAAAATCTAGCTGTTTGCAAGTTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LYRNLVYRRRML*AENLAVCKLVL Trigger: CAGAACCAACTTGCAAACAGCTAGATTTTCTGCCAATAACATGCGACGCCTGTAAACAAGATTTCTGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 ENSMUST00000150992.2 |
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| CDS CAA 72 bp | ATGACCCACGTAGGAAAAATGGTCTTTACAGAAATCTaGTTTACAGGCGTCGCATGTTATTGGCAGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: MTHVGKMVFTEI*FTGVACYWQKI Trigger: GATTTTCTGCCAATAACATGCGACGCCTGTAAACAAGATTTCTGTAAAGACCATTTTTCCTACGTGGGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 ENSMUST00000150992.2 |
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| CDS CAA 90 bp | AAAAATGGTCTTTACAGAAATCTTGTTTACAGGCGTCGCATGTTATaGGCAGAAAATCTAGCTGTTTGCAAGTTGGTTCTGAACAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: KNGLYRNLVYRRRML*AENLAVCKLVLNSA Trigger: AGCACTGTTCAGAACCAACTTGCAAACAGCTAGATTTTCTGCCAATAACATGCGACGCCTGTAAACAAGATTTCTGTAAAGACCATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079996.13 ENSMUST00000110851.8 ENSMUST00000150992.2 |
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