Pregenerated sensors for ZFAND1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039795Ensembl transcript IDs: ENSMUST00000037839.12, ENSMUST00000108377.8, ENSMUST00000184644.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCGCTGTTCCGCTACTTTTTGCGCCTTTCCGTCCCTTACTTGCTaGCCCTCCTGTCTTGGCATCGACAATGTCTCTGACAAGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: RRCSATFCAFPSLTC*PSCLGIDNVSDKFL Trigger: CAGAAACTTGTCAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGGAAAGGCGCAAAAAGTAGCGGAACAGCGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 90 bp | GTCCCTTACTTGCTGCCCCTCCTGTCTTGGCATCGACAATGTCTCTaGCAAGTTTCTGTGTGGCAGCCATTCGAGGCTTTGCGACTTCCA | + |
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Preference number: 1 (lower is better) Translates to: VPYLLPLLSWHRQCL*QVSVWQPFEALRLP Trigger: TGGAAGTCGCAAAGCCTCGAATGGCTGCCACACAGAAACTTGTCAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGCAAGTAAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR GCA 90 bp | CTTCGCCGCTGTTCCGCTACTTTTTGCGCCTTTCCGTCCCTTACTTaGTGCCCCTCCTGTCTTGGCATCGACAATGTCTCTGACAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LRRCSATFCAFPSLT*CPSCLGIDNVSDKF Trigger: AAACTTGTCAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGGAAAGGCGCAAAAAGTAGCGGAACAGCGGCGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR GCA 90 bp | AAGTATGTTCTTTCTGTCTGCGGCAGGGACTTATCCCCATCAGCGTaGATCTTTAGCTTCATCAGCGCCACCTTCGCCGCTGTTCCGCTA | + |
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Preference number: 1 (lower is better) Translates to: KYVLSVCGRDLSPSA*IFSFISATFAAVPL Trigger: TAGCGGAACAGCGGCGAAGGTGGCGCTGATGAAGCTAAAGATGCACGCTGATGGGGATAAGTCCCTGCCGCAGACAGAAAGAACATACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 90 bp | CGTGATCCACCTTTCCAATGTGTGATCCAATGGCAGGGCTTCTCCTaGAGGGACATGACACAGCCTCAGCTTCTTCGCTGTCAGCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: RDPPFQCVIQWQGFS*RDMTQPQLLRCQLV Trigger: AACAAGCTGACAGCGAAGAAGCTGAGGCTGTGTCATGTCCCTTCAGGAGAAGCCCTGCCATTGGATCACACATTGGAAAGGTGGATCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR GCA 90 bp | GACAATGTCTCTGACAAGTTTCTGTGTGGCAGCCATTCGAGGCTTTaGGACTTCCAGCTTTTCACAGTCATGATCCGACTGATGACGGTG | + |
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Preference number: 1 (lower is better) Translates to: DNVSDKFLCGSHSRL*DFQLFTVMIRLMTV Trigger: CACCGTCATCAGTCGGATCATGACTGTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCTGCCACACAGAAACTTGTCAGAGACATTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 90 bp | TTCTTAGGTATGTGGTGTCTTATCACACACCTTATCCTGGAAGACTaGATGAGAGGATCTGCAAGAGTCTGCAATTCATGCGTCATGATT | + |
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Preference number: 1 (lower is better) Translates to: FLGMWCLITHLILED*MRGSARVCNSCVMI Trigger: AATCATGACGCATGAATTGCAGACTCTTGCAGATCCTCTCATTCAGTCTTCCAGGATAAGGTGTGTGATAAGACACCACATACCTAAGAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| 3UTR TCA 90 bp | GCCAGTCAATGGCTGCCATTAGTCTACCAGGAAAGACACTTTTGCTaGTATTTCTACAGCCTAACCCAGAAACAGCTAATAAAATACTTC | + |
|
Preference number: 1 (lower is better) Translates to: ASQWLPLVYQERHFC*YFYSLTQKQLIKYF Trigger: GAAGTATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAAATATCAGCAAAAGTGTCTTTCCTGGTAGACTAATGGCAGCCATTGACTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| 3UTR CAA 90 bp | TCTTTAGCTTCATCAGCGCCACCTTCGCCGCTGTTCCGCTACTTTTaGCGCCTTTCCGTCCCTTACTTGCTGCCCCTCCTGTCTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SLASSAPPSPLFRYF*RLSVPYLLPLLSWH Trigger: ATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGGAAAGGCGCAAAAAGTAGCGGAACAGCGGCGAAGGTGGCGCTGATGAAGCTAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGACTTATCCCCATCAGCGTGCATCTTTAGCTTCATCAGCGCCACCTTCACCTCAGAACAACCATaGGAGTCCTTGCTTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GRDLSPSACIFSFISATFTSEQP*ESLLLC Trigger: ACACAGAAGCAAGGACTCTCATGGTTGTTCTGAGGT...GAAGGTGGCGCTGATGAAGCTAAAGATGCACGCTGATGGGGATAAGTCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR CAA 90 bp | CTACTTTTTGCGCCTTTCCGTCCCTTACTTGCTGCCCCTCCTGTCTaGGCATCGACAATGTCTCTGACAAGTTTCTGTGTGGCAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: LLFAPFRPLLAAPPV*ASTMSLTSFCVAAI Trigger: AATGGCTGCCACACAGAAACTTGTCAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGGAAAGGCGCAAAAAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTTTGGCAAGTAGACCTGGAAGTATGTTCTTTCTGTCTGCGGCAGGGACTCACCTTTCCAATGTGTaGTCCAATGGCAGGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SPLASRPGSMFFLSAAGTHLSNV*SNGRAS Trigger: AGAAGCCCTGCCATTGGATCACACATTGGAAAGGTG...AGTCCCTGCCGCAGACAGAAAGAACATACTTCCAGGTCTACTTGCCAAAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAAAGTCCACAACCTTCCCGATGCTCCACCGCAGGCAAAAGAACATGGCTAACCATGAGAGTCCTTaGTTCTGTGTTCAAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: AAKSTTFPMLHRRQKNMANHESP*FCVQGK Trigger: TTTGCCTTGAACACAGAAGCAAGGACTCTCATGGTT...AGCCATGTTCTTTTGCCTGCGGTGGAGCATCGGGAAGGTTGTGGACTTTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTGGCAGCCATTCGAGGCTTTGCGACTTCCAGCTTTTCACAGTCATGATCTCTTTGGTCTCTCCTTaGCTACATTCACCTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LCGSHSRLCDFQLFTVMISLVSP*LHSPQN Trigger: GTTCTGAGGTGAATGTAGTCAAGGAGAGACCAAAGA...GATCATGACTGTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCTGCCACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR TCA 90 bp | TTCGCTGTCAGCTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTGCAAAGTCTCCTGAAGGGACATaGCACAGCCTCAGCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FAVSLLFSFLRLAREAAKSPEGT*HSLSFF Trigger: GAAGAAGCTGAGGCTGTGTCATGTCCCTTCAGGAGA...CTTTGCAGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAGCTGACAGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATTCTCCTGAAGGGACATaGCACAGCCTCAGCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNSPEGT*HSLSFF Trigger: GAAGAAGCTGAGGCTGTGTCATGTCCCTTCAGGAGA...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108377.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATGGCACTCCTCCTTCGTaGTCCACCTTTCCAATGTGT | + |
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Preference number: 2 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNGTPPS*STFPMC Trigger: ACACATTGGAAAGGTGGATCACGAAGGAGGAGTGCC...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108377.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCGCTGTCAGCTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTGCAGCCATTCGAGGCTTTaGGACTTCCAGCTTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: LLRCQLVVFIPEISERSCSHSRL*DFQLFT Trigger: TGTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCT...GCAGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAGCTGACAGCGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATCACCTTTCCAATGTGTaGTCCAATGGCAGGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNHLSNV*SNGRAS Trigger: AGAAGCCCTGCCATTGGATCACACATTGGAAAGGTG...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108377.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCTTCGCTGTCAGCTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTCGTCAGTGCAGCCCTTaGAAGAGCATGAGTAAGATT | + |
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Preference number: 2 (lower is better) Translates to: SFFAVSLLFSFLRLAREARQCSP*KSMSKI Trigger: AATCTTACTCATGCTCTTTCAAGGGCTGCACTGACG...AGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAGCTGACAGCGAAGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCTTCGCTGTCAGCTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTGCCCTTGAAAGAGCATaGGTAAGATTTGTGTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: SFFAVSLLFSFLRLAREAALERA*VRFVFI Trigger: GATGAACACAAATCTTACTCATGCTCTTTCAAGGGC...AGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAGCTGACAGCGAAGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCTTCGCTGTCAGCTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTGTGTTCATCTGTCTTTaGTCTCTCCTTGACTACATT | + |
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Preference number: 2 (lower is better) Translates to: SFFAVSLLFSFLRLAREAVFICL*SLLDYI Trigger: AATGTAGTCAAGGAGAGACCAAAGACAGATGAACAC...AGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAGCTGACAGCGAAGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR CAA 90 bp | AGCAGCCAGTCAATGGCTGCCATTAGTCTACCAGGAAAGACACTTTaGCTGATATTTCTACAGCCTAACCCAGAAACAGCTAATAAAATA | + |
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Preference number: 2 (lower is better) Translates to: SSQSMAAISLPGKTL*LIFLQPNPETANKI Trigger: TATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAAATATCAGCAAAAGTGTCTTTCCTGGTAGACTAATGGCAGCCATTGACTGGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| 3UTR TCA 72 bp | GTGAGCGGGATCTCGGAGGGAAGGCAGTACAGGCTGTaGCACAGCAGCCAGTCAATGGCTGCCATTAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: VSGISEGRQYRL*HSSQSMAAISL Trigger: TAGACTAATGGCAGCCATTGACTGGCTGCTGTGTCACAGCCTGTACTGCCTTCCCTCCGAGATCCCGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| 3UTR GCA 72 bp | CTTTCTGTCTGCGGCAGGGACTTATCCCCATCAGCGTaGATCTTTAGCTTCATCAGCGCCACCTTCGCCGCT | + |
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Preference number: 3 (lower is better) Translates to: LSVCGRDLSPSA*IFSFISATFAA Trigger: AGCGGCGAAGGTGGCGCTGATGAAGCTAAAGATGCACGCTGATGGGGATAAGTCCCTGCCGCAGACAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR GCA 72 bp | TCCGCTACTTTTTGCGCCTTTCCGTCCCTTACTTGCTaGCCCTCCTGTCTTGGCATCGACAATGTCTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: SATFCAFPSLTC*PSCLGIDNVSD Trigger: GTCAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGGAAAGGCGCAAAAAGTAGCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTCCACAACCTTCCCGATGCTCCACCGCAGGCAAAAGAACATGGCTTTGCCAGCCATTCGAGGCTTaGCGACTTCCAGCTTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: QSPQPSRCSTAGKRTWLCQPFEA*RLPAFH Trigger: GTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCTG...GCAAAGCCATGTTCTTTTGCCTGCGGTGGAGCATCGGGAAGGTTGTGGACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 72 bp | TTGCTGCCCCTCCTGTCTTGGCATCGACAATGTCTCTaGCAAGTTTCTGTGTGGCAGCCATTCGAGGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLPLLSWHRQCL*QVSVWQPFEAL Trigger: CAAAGCCTCGAATGGCTGCCACACAGAAACTTGTCAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR GCA 72 bp | TGTTCCGCTACTTTTTGCGCCTTTCCGTCCCTTACTTaGTGCCCCTCCTGTCTTGGCATCGACAATGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: CSATFCAFPSLT*CPSCLGIDNVS Trigger: AGAGACATTGTCGATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGGAAAGGCGCAAAAAGTAGCGGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 72 bp | GTAGAATGGCAAAATCACAAAAAGGTGGGTGTTGTGTaGGCGGGATCTCGGAGGGAAGGCAGTACAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: VEWQNHKKVGVV*AGSRREGSTGC Trigger: ACAGCCTGTACTGCCTTCCCTCCGAGATCCCGCTCACACAACACCCACCTTTTTGTGATTTTGCCATTCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| 3UTR GCA 72 bp | TACCACTTGTACGACCCCTCCAAAGAGTCTGCCATCTaGAGCTTCCTCTGCCGTAGAATGGCAAAATCACAA | + |
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Preference number: 3 (lower is better) Translates to: YHLYDPSKESAI*SFLCRRMAKSQ Trigger: TTGTGATTTTGCCATTCTACGGCAGAGGAAGCTGCAGATGGCAGACTCTTTGGAGGGGTCGTACAAGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| 3UTR GCA 72 bp | TCTGACAAGTTTCTGTGTGGCAGCCATTCGAGGCTTTaGGACTTCCAGCTTTTCACAGTCATGATCCGACTG | + |
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Preference number: 3 (lower is better) Translates to: SDKFLCGSHSRL*DFQLFTVMIRL Trigger: CAGTCGGATCATGACTGTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCTGCCACACAGAAACTTGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR GCA 72 bp | CTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTaGAAAGTCCACAACCTTCCCGATGCTCCACCGCAG | + |
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Preference number: 3 (lower is better) Translates to: LVVFIPEISERS*KVHNLPDAPPQ Trigger: CTGCGGTGGAGCATCGGGAAGGTTGTGGACTTTGCAGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 72 bp | CACAAGCTCTACGTCAGTGCAGCCCTTGAAAGAGCATaGGTAAGATTTGTGTTCATCTGTCTTTGGTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: HKLYVSAALERA*VRFVFICLWSL Trigger: GAGAGACCAAAGACAGATGAACACAAATCTTACTCATGCTCTTTCAAGGGCTGCACTGACGTAGAGCTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 72 bp | AGATCACTGCCACAAGCTCTACGTCAGTGCAGCCCTTaGAAGAGCATGAGTAAGATTTGTGTTCATCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: RSLPQALRQCSP*KSMSKICVHLS Trigger: AGACAGATGAACACAAATCTTACTCATGCTCTTTCAAGGGCTGCACTGACGTAGAGCTTGTGGCAGTGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| 3UTR TCA 72 bp | ATGTGGTGTCTTATCACACACCTTATCCTGGAAGACTaGATGAGAGGATCTGCAAGAGTCTGCAATTCATGC | + |
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Preference number: 3 (lower is better) Translates to: MWCLITHLILED*MRGSARVCNSC Trigger: GCATGAATTGCAGACTCTTGCAGATCCTCTCATTCAGTCTTCCAGGATAAGGTGTGTGATAAGACACCACAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| 3UTR TCA 72 bp | TGGCTGCCATTAGTCTACCAGGAAAGACACTTTTGCTaGTATTTCTACAGCCTAACCCAGAAACAGCTAATA | + |
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Preference number: 3 (lower is better) Translates to: WLPLVYQERHFC*YFYSLTQKQLI Trigger: TATTAGCTGTTTCTGGGTTAGGCTGTAGAAATATCAGCAAAAGTGTCTTTCCTGGTAGACTAATGGCAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR TCA 90 bp | GGCAGGGACTTATCCCCATCAGCGTGCATCTTTAGCTTCATCAGCGCCACCTTCCAGGTCTCCCGCGGATaGAAATGGGGCTTCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: GRDLSPSACIFSFISATFQVSRG*KWGFQR Trigger: ACGCTGGAAGCCCCATTTTCATCCGCGGGAGACCTG...GAAGGTGGCGCTGATGAAGCTAAAGATGCACGCTGATGGGGATAAGTCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| CDS-3UTR GCA 90 bp | AGCTTCTTCGCTGTCAGCTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTCCTCGCTGCCGGCAGTaGTGCACCTGGCAGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SFFAVSLLFSFLRLAREAPRCRQ*CTWQCC Trigger: GCAGCACTGCCAGGTGCAGCACTGCCGGCAGCGAGG...AGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAGCTGACAGCGAAGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| CDS-3UTR GCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATCGCTGCCGGCAGTGCTaGACCTGGCAGTGCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNRCRQC*TWQCCP Trigger: TGGGCAGCACTGCCAGGTGCAGCACTGCCGGCAGCG...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | AAGTATGTTCTTTCTGTCTGCGGCAGGGACTTATCCCCATCAGCGTGCATCTTTTGCTGCACCTGGCAGTaGTGCCCAATGTCCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: KYVLSVCGRDLSPSACIFCCTWQ*CPMSNS Trigger: GGAGTTGGACATTGGGCAGCACTGCCAGGTGCAGCA...AAAGATGCACGCTGATGGGGATAAGTCCCTGCCGCAGACAGAAAGAACATACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTCGCTGTCAGCTTGTTGTTTTCATTCCTGAGATTAGCGAGAGAAGCTCGGCAGTGCTGCACCTaGCAGTGCTGCCCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: SFFAVSLLFSFLRLAREARQCCT*QCCPMS Trigger: GGACATTGGGCAGCACTGCCAGGTGCAGCACTGCCG...AGCTTCTCTCGCTAATCTCAGGAATGAAAACAACAAGCTGACAGCGAAGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| CDS-3UTR CCA 90 bp | AAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGCGGCAGTGCTGCACCTaGCAGTGCTGCCCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: KADCLLIVVSAYKDSAGLRQCCT*QCCPMS Trigger: GGACATTGGGCAGCACTGCCAGGTGCAGCACTGCCG...CAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTCGCTGCCGGCAGTGCTaGACCTGGCAGTGCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSRCRQC*TWQCCP Trigger: TGGGCAGCACTGCCAGGTGCAGCACTGCCGGCAGCG...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | TTCTACAGCCTAACCCAGAAACAGCTAATAAAATACTTCGCCAGTAATTGTCAATCTCGCTGCCGGCAGTaGTGCACCTGGCAGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FYSLTQKQLIKYFASNCQSRCRQ*CTWQCC Trigger: GCAGCACTGCCAGGTGCAGCACTGCCGGCAGCGAGA...TTGACAATTACTGGCGAAGTATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR GCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTTCTCGCTGCCGGCAGTaGTGCACCTGGCAGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSSRCRQ*CTWQCC Trigger: GCAGCACTGCCAGGTGCAGCACTGCCGGCAGCGAGA...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | TCAATGGCTGCCATTAGTCTACCAGGAAAGACACTTTTGCTGATATTTCTACAGCCGTCCCTTACTTGCTaGCCCTCCTGTCTTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: SMAAISLPGKTLLLIFLQPSLTC*PSCLGI Trigger: GATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGG...CTGTAGAAATATCAGCAAAAGTGTCTTTCCTGGTAGACTAATGGCAGCCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR GCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATCCACAACCTTCCCGATaGTCCACCGCAGGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNPQPSR*STAGKR Trigger: TCTTTTGCCTGCGGTGGAGCATCGGGAAGGTTGTGG...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR CCA 90 bp | TTCTACAGCCTAACCCAGAAACAGCTAATAAAATACTTCGCCAGTAATTGTCAACGGCAGTGCTGCACCTaGCAGTGCTGCCCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYSLTQKQLIKYFASNCQRQCCT*QCCPMS Trigger: GGACATTGGGCAGCACTGCCAGGTGCAGCACTGCCG...TTGACAATTACTGGCGAAGTATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR TCA 90 bp | AAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGTCTCCTGAAGGGACATaGCACAGCCTCAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KADCLLIVVSAYKDSAGLSPEGT*HSLSFF Trigger: GAAGAAGCTGAGGCTGTGTCATGTCCCTTCAGGAGA...CAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR TCA 90 bp | AAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGGGCACTCCTCCTTCGTaGTCCACCTTTCCAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KADCLLIVVSAYKDSAGLGTPPS*STFPMC Trigger: ACACATTGGAAAGGTGGATCACGAAGGAGGAGTGCC...CAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR GCA 90 bp | TTCTACAGCCTAACCCAGAAACAGCTAATAAAATACTTCGCCAGTAATTGTCAATGCTGCACCTGGCAGTaGTGCCCAATGTCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYSLTQKQLIKYFASNCQCCTWQ*CPMSNS Trigger: GGAGTTGGACATTGGGCAGCACTGCCAGGTGCAGCA...TTGACAATTACTGGCGAAGTATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR GCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTTGCTGCACCTGGCAGTaGTGCCCAATGTCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSCCTWQ*CPMSNS Trigger: GGAGTTGGACATTGGGCAGCACTGCCAGGTGCAGCA...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTCCGTCCCTTACTTGCTaGCCCTCCTGTCTTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSPSLTC*PSCLGI Trigger: GATGCCAAGACAGGAGGGGCAGCAAGTAAGGGACGG...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR TCA 90 bp | AAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGACCTCAGAACAACCATaGGAGTCCTTGCTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KADCLLIVVSAYKDSAGLTSEQP*ESLLLC Trigger: ACACAGAAGCAAGGACTCTCATGGTTGTTCTGAGGT...CAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGCGTCAGTGCAGCCCTTaGAAGAGCATGAGTAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KADCLLIVVSAYKDSAGLRQCSP*KSMSKI Trigger: AATCTTACTCATGCTCTTTCAAGGGCTGCACTGACG...CAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATCGTCAGTGCAGCCCTTaGAAGAGCATGAGTAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNRQCSP*KSMSKI Trigger: AATCTTACTCATGCTCTTTCAAGGGCTGCACTGACG...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATAGCCATTCGAGGCTTTaGGACTTCCAGCTTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNSHSRL*DFQLFT Trigger: TGTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCT...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| 3UTR CAA 72 bp | TCAATGGCTGCCATTAGTCTACCAGGAAAGACACTTTaGCTGATATTTCTACAGCCTAACCCAGAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMAAISLPGKTL*LIFLQPNPETA Trigger: AGCTGTTTCTGGGTTAGGCTGTAGAAATATCAGCAAAAGTGTCTTTCCTGGTAGACTAATGGCAGCCATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
||
| CDS-3UTR TCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATGCCCTTGAAAGAGCATaGGTAAGATTTGTGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNALERA*VRFVFI Trigger: GATGAACACAAATCTTACTCATGCTCTTTCAAGGGC...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR TCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTACCTCAGAACAACCATaGGAGTCCTTGCTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSTSEQP*ESLLLC Trigger: ACACAGAAGCAAGGACTCTCATGGTTGTTCTGAGGT...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTTATGTTCTTTCTGTCTaGGGCAGGGACTTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSYVLSV*GRDLSP Trigger: TGGGGATAAGTCCCTGCCGCAGACAGAAAGAACATA...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR GCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGAAGTATGTTCTTTCTaGGGCAGGGACTTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSEVCSF*GRDLSP Trigger: TGGGGATAAGTCCCTGCCGCAGAAAGAACATACTTC...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108377.8 |
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| CDS-3UTR CCA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATGTGTTCATCTGTCTTTaGTCTCTCCTTGACTACATT | + |
|
Preference number: 4 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNVFICL*SLLDYI Trigger: AATGTAGTCAAGGAGAGACCAAAGACAGATGAACAC...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR CCA 90 bp | TTCTACAGCCTAACCCAGAAACAGCTAATAAAATACTTCGCCAGTAATTGTCAATTCCTTGCTCCCCTTTaGCAAGTAGACCTGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FYSLTQKQLIKYFASNCQFLAPL*QVDLEV Trigger: TACTTCCAGGTCTACTTGCCAAAGGGGAGCAAGGAA...TTGACAATTACTGGCGAAGTATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
||
| CDS-3UTR CCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTTTCCTTGCTCCCCTTTaGCAAGTAGACCTGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSFLAPL*QVDLEV Trigger: TACTTCCAGGTCTACTTGCCAAAGGGGAGCAAGGAA...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR TCA 90 bp | TTCTACAGCCTAACCCAGAAACAGCTAATAAAATACTTCGCCAGTAATTGTCAATCTTTGGTCTCTCCTTaGCTACATTCACCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FYSLTQKQLIKYFASNCQSLVSP*LHSPQN Trigger: GTTCTGAGGTGAATGTAGTCAAGGAGAGACCAAAGA...TTGACAATTACTGGCGAAGTATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR TCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTTCTTTGGTCTCTCCTTaGCTACATTCACCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSSLVSP*LHSPQN Trigger: GTTCTGAGGTGAATGTAGTCAAGGAGAGACCAAAGA...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR GCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTAACCATGAGAGTCCTTaGTTCTGTGTTCAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSNHESP*FCVQGK Trigger: TTTGCCTTGAACACAGAAGCAAGGACTCTCATGGTT...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR CCA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGTGTTCATCTGTCTTTaGTCTCTCCTTGACTACATT | + |
|
Preference number: 4 (lower is better) Translates to: KHNKADCLLIVVSAYKDSVFICL*SLLDYI Trigger: AATGTAGTCAAGGAGAGACCAAAGACAGATGAACAC...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS TCA 90 bp | CGCCACCGCCCCGGCCGTCAGAACCCGGCCCAGGTCTCCCGCGGATaGAAATGGGGCTTCCAGCGTCACCTCGCTGCCGGCAGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHRPGRQNPAQVSRG*KWGFQRHLAAGSAA Trigger: TGCAGCACTGCCGGCAGCGAGGTGACGCTGGAAGCCCCATTTTCATCCGCGGGAGACCTGGGCCGGGTTCTGACGGCCGGGGCGGTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
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| CDS GCA 90 bp | CTGGAAGTATGTTCTTTCTGCGGCAGGGACTTATCCCCATCAGCGTaGATCTTTAGCTTCATCAGCGCCACCTTCGCCGCTGTTCCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LEVCSFCGRDLSPSA*IFSFISATFAAVPL Trigger: TAGCGGAACAGCGGCGAAGGTGGCGCTGATGAAGCTAAAGATGCACGCTGATGGGGATAAGTCCCTGCCGCAGAAAGAACATACTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108377.8 |
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| CDS-3UTR CAA 90 bp | AAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGGCTGCCCCTCCTGTCTaGGCATCGACAATGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KADCLLIVVSAYKDSAGLAAPPV*ASTMSL Trigger: CAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGC...CAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR CAA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATCTTTCCGTCCCTTACTaGCTGCCCCTCCTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNLSVPY*LPLLSW Trigger: CCAAGACAGGAGGGGCAGCAAGTAAGGGACGGAAAG...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
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| CDS-3UTR CAA 90 bp | AAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGCAGCCATTCGAGGCTTaGCGACTTCCAGCTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KADCLLIVVSAYKDSAGLQPFEA*RLPAFH Trigger: GTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCTG...CAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
||
| CDS-3UTR CAA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGCCCCTCCTGTCTaGGCATCGACAATGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KHNKADCLLIVVSAYKDSAAPPV*ASTMSL Trigger: CAGAGACATTGTCGATGCCAAGACAGGAGGGGCAGC...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
||
| CDS-3UTR CAA 90 bp | AAACACAACAAAGCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTCAGCCATTCGAGGCTTaGCGACTTCCAGCTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KHNKADCLLIVVSAYKDSQPFEA*RLPAFH Trigger: GTGAAAAGCTGGAAGTCGCAAAGCCTCGAATGGCTG...AGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGCTTTGTTGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037839.12 ENSMUST00000108377.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACTGTCTACTGATAGTGGTTTCTGCTTATAAGGATTCTGCTGGCTTGAATTTCTTCGCTGTCAGCTaGTTGTTTTCATTCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ADCLLIVVSAYKDSAGLNFFAVS*LFSFLR Trigger: TCTCAGGAATGAAAACAACAAGCTGACAGCGAAGAA...ATTCAAGCCAGCAGAATCCTTATAAGCAGAAACCACTATCAGTAGACAGTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
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| CDS-3UTR CAA 90 bp | TTCTACAGCCTAACCCAGAAACAGCTAATAAAATACTTCGCCAGTAATTGTCAATTCGCTGTCAGCTTGTaGTTTTCATTCCTGAGATTA | + |
|
Preference number: 5 (lower is better) Translates to: FYSLTQKQLIKYFASNCQFAVSL*FSFLRL Trigger: TAATCTCAGGAATGAAAACAACAAGCTGACAGCGAA...TTGACAATTACTGGCGAAGTATTTTATTAGCTGTTTCTGGGTTAGGCTGTAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037839.12 |
||
| CDS TCA 72 bp | CCCGGCCGTCAGAACCCGGCCCAGGTCTCCCGCGGATaGAAATGGGGCTTCCAGCGTCACCTCGCTGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGRQNPAQVSRG*KWGFQRHLAAG Trigger: GCCGGCAGCGAGGTGACGCTGGAAGCCCCATTTTCATCCGCGGGAGACCTGGGCCGGGTTCTGACGGCCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184644.8 |
||
| CDS GCA 72 bp | TGTTCTTTCTGCGGCAGGGACTTATCCCCATCAGCGTaGATCTTTAGCTTCATCAGCGCCACCTTCGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSFCGRDLSPSA*IFSFISATFAA Trigger: AGCGGCGAAGGTGGCGCTGATGAAGCTAAAGATGCACGCTGATGGGGATAAGTCCCTGCCGCAGAAAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108377.8 |
||
| CDS GCA 72 bp | CCCCTTTGGCAAGTAGACCTGGAAGTATGTTCTTTCTaGGGCAGGGACTTATCCCCATCAGCGTGCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLWQVDLEVCSF*GRDLSPSACIF Trigger: AAAGATGCACGCTGATGGGGATAAGTCCCTGCCGCAGAAAGAACATACTTCCAGGTCTACTTGCCAAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108377.8 |
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