Pregenerated sensors for ZEB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026872Ensembl transcript IDs: ENSMUST00000028229.13, ENSMUST00000068415.11, ENSMUST00000076836.13, ENSMUST00000127520.8, ENSMUST00000153561.6, ENSMUST00000176438.9, ENSMUST00000176732.8, ENSMUST00000177302.8, ENSMUST00000200844.4, ENSMUST00000201211.4, ENSMUST00000201490.2, ENSMUST00000201623.4, ENSMUST00000201804.4, ENSMUST00000201969.4, ENSMUST00000202187.4, ENSMUST00000202432.4, ENSMUST00000202935.4
Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAGAGTATGTTGCTCATGTGTTCTTTGTTGGTCCTGTCTCTTGTaGGTAGGGACACAGATATGCCCCATGGGCAGCAGAGACCTACAT | + |
|
Preference number: 1 (lower is better) Translates to: ERVCCSCVLCWSCLL*VGTQICPMGSRDLH Trigger: ATGTAGGTCTCTGCTGCCCATGGGGCATATCTGTGTCCCTACCCACAAGAGACAGGACCAACAAAGAACACATGAGCAACATACTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CCA 90 bp | TCTTCTTTCTGGGGAGAAAGAGTATGTTGCTCATGTGTTCTTTGTTaGTCCTGTCTCTTGTGGGTAGGGACACAGATATGCCCCATGGGC | + |
|
Preference number: 1 (lower is better) Translates to: SSFWGERVCCSCVLC*SCLLWVGTQICPMG Trigger: GCCCATGGGGCATATCTGTGTCCCTACCCACAAGAGACAGGACCAACAAAGAACACATGAGCAACATACTCTTTCTCCCCAGAAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR TCA 90 bp | AACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTGCTTaGAAGCAAGGGTTTATTCGACCCCCAAGTCTAGCTGGAAAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: NRSANACHTRSLKTA*KQGFIRPPSLAGKR Trigger: TCTCTTTCCAGCTAGACTTGGGGGTCGAATAAACCCTTGCTTTCAAGCAGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 90 bp | CATCAACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTaGTTGAAAGCAAGGGTTTATTCGACCCCCAAGTCTAGCTGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: HQQISQCLSYTELED*LKARVYSTPKSSWK Trigger: TTTCCAGCTAGACTTGGGGGTCGAATAAACCCTTGCTTTCAAGCAGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 90 bp | TTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCAGCCAATaGCTGTCATACACGGAGCTTGAAGACTGCTTGAAAGCAAGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: LVQQCLSNGHQQISQ*LSYTELEDCLKARV Trigger: AACCCTTGCTTTCAAGCAGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 90 bp | CACAGCTTAACAAAACTGTGCCGTCACACCACTTTAGTTCAACAGTaGCTGTCGAATGGGCATCAACAGATCAGCCAATGCCTGTCATAC | + |
|
Preference number: 1 (lower is better) Translates to: HSLTKLCRHTTLVQQ*LSNGHQQISQCLSY Trigger: GTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACGGCACAGTTTTGTTAAGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 90 bp | GCCAGTAAGGCATCTCCAACCTTTGTTCACAGCTTAACAAAACTGTaGCGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: ASKASPTFVHSLTKL*RHTTLVQQCLSNGH Trigger: ATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACGGCACAGTTTTGTTAAGCTGTGAACAAAGGTTGGAGATGCCTTACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 90 bp | TGGGTAGGGACACAGATATGCCCCATGGGCAGCAGAGACCTACATTaGTTTAAAGGAGGCCACAGGGATTTATTCTACCCAGACAAAATT | + |
|
Preference number: 1 (lower is better) Translates to: WVGTQICPMGSRDLH*FKGGHRDLFYPDKI Trigger: AATTTTGTCTGGGTAGAATAAATCCCTGTGGCCTCCTTTAAAGCAATGTAGGTCTCTGCTGCCCATGGGGCATATCTGTGTCCCTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CCA 90 bp | CTGTACGTTGGCTGTCTCTTCTCTAGTCTCTACCCTGTGAGTTTCTaGCCTGCCAATTTCAACTTGAAGCTTGACTGGGCTGATTTGATG | + |
|
Preference number: 1 (lower is better) Translates to: LYVGCLFSSLYPVSF*PANFNLKLDWADLM Trigger: CATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACAGGGTAGAGACTAGAGAAGAGACAGCCAACGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 90 bp | CTTTCCAAACATGCAAACTCTGGTATAGCGATGACAGGAGCAGAATaGTTTATGCCATCTCTCCTAATGCCAGTCCTCACCAGGCTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: LSKHANSGIAMTGAE*FMPSLLMPVLTRLE Trigger: TTCAAGCCTGGTGAGGACTGGCATTAGGAGAGATGGCATAAAGCATTCTGCTCCTGTCATCGCTATACCAGAGTTTGCATGTTTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CCA 90 bp | TACCCTGTGAGTTTCTGGCCTGCCAATTTCAACTTGAAGCTTGACTaGGCTGATTTGATGCAAATACCTCCAGGGAAAACCCTGAAACTG | + |
|
Preference number: 1 (lower is better) Translates to: YPVSFWPANFNLKLD*ADLMQIPPGKTLKL Trigger: CAGTTTCAGGGTTTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACAGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR TCA 90 bp | AAGCTCAAGTTCATGCTAAGGGAGATGAACGCTGTTAGTTCTGGCTaGGAAATCTCATCTCTCTTGCCCAGTTTCTCAGAACTAAGCCTA | + |
|
Preference number: 1 (lower is better) Translates to: KLKFMLREMNAVSSG*EISSLLPSFSELSL Trigger: TAGGCTTAGTTCTGAGAAACTGGGCAAGAGAGATGAGATTTCTCAGCCAGAACTAACAGCGTTCATCTCCCTTAGCATGAACTTGAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CCA 90 bp | TCTGCTCAATTGCCTCTGTATAGTCATTACATCTTTTCTCTCTCTTaGGGCATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: SAQLPLYSHYIFSLS*GMYVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACATACATGCCCCAAGAGAGAGAAAAGATGTAATGACTATACAGAGGCAATTGAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR TCA 90 bp | AGGAGTGTCTCTTCGAACATATGTTTGTTACGTGTCTGTTTGGGTTaGCCAAAATGCATTTTGCATTTACAGGCTCCTGGTTTCTGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: RSVSSNICLLRVCLG*PKCILHLQAPGFWS Trigger: AGACCAGAAACCAGGAGCCTGTAAATGCAAAATGCATTTTGGTCAACCCAAACAGACACGTAACAAACATATGTTCGAAGAGACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CCA 90 bp | TTCACAGGAGTGTCTCTTCGAACATATGTTTGTTACGTGTCTGTTTaGGTTGACCAAAATGCATTTTGCATTTACAGGCTCCTGGTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: FTGVSLRTYVCYVSV*VDQNAFCIYRLLVS Trigger: AGAAACCAGGAGCCTGTAAATGCAAAATGCATTTTGGTCAACCCAAACAGACACGTAACAAACATATGTTCGAAGAGACACTCCTGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CCA 90 bp | AAACTCTGTCATCAGGATAGAAGGGAATTATTTGACAAAGAGAATTaGCAACTCCTTGCTATTCACAGGAGTGTCTCTTCGAACATATGT | + |
|
Preference number: 1 (lower is better) Translates to: KLCHQDRRELFDKEN*QLLAIHRSVSSNIC Trigger: ACATATGTTCGAAGAGACACTCCTGTGAATAGCAAGGAGTTGCCAATTCTCTTTGTCAAATAATTCCCTTCTATCCTGATGACAGAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR TCA 90 bp | CACGTAAATTCTTTGGTGTTTCCCCCTCTTTTAGTATTAGTTCTGTaGGTGATGAGCATGCAAATGCGAGACTCAAATAATTGTATTGAG | + |
|
Preference number: 1 (lower is better) Translates to: HVNSLVFPPLLVLVL*VMSMQMRDSNNCIE Trigger: CTCAATACAATTATTTGAGTCTCGCATTTGCATGCTCATCACTCACAGAACTAATACTAAAAGAGGGGGAAACACCAAAGAATTTACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR GCA 90 bp | ACATATGTTTGTTACGTGTCTGTTTGGGTTGACCAAAATGCATTTTaGATTTACAGGCTCCTGGTTTCTGGTCTCTATGAACATTTAATC | + |
|
Preference number: 1 (lower is better) Translates to: TYVCYVSVWVDQNAF*IYRLLVSGLYEHLI Trigger: GATTAAATGTTCATAGAGACCAGAAACCAGGAGCCTGTAAATGCAAAATGCATTTTGGTCAACCCAAACAGACACGTAACAAACATATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CCA 90 bp | AAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTaGAGGGCTTTCTTGTTTATGACCTTGGAAAGGAATCCTAGGATA | + |
|
Preference number: 1 (lower is better) Translates to: KGRVFDKKRRLCVMI*RAFLFMTLERNPRI Trigger: TATCCTAGGATTCCTTTCCAAGGTCATAAACAAGAAAGCCCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAACACCGATCATGAGATTTGGCCTTCGAGCTCTGCTAAGTACCGAGGAGATGTGGCCCAGGAGGGGCTaGGGTTCCCCAACACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RTPIMRFGLRALLSTEEMWPRRG*GSPTLK Trigger: CTTGAGTGTTGGGGAACCCCAGCCCCTCCTGGGCCA...CATCTCCTCGGTACTTAGCAGAGCTCGAAGGCCAAATCTCATGATCGGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | ACCGAGGAGATGCCTCAGATAATTAAGTGCACCCACTCCTCTTTAGGCATCCAAAGTTTCAGGTGCTACTaGCATTGGCCCAGGAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TEEMPQIIKCTHSSLGIQSFRCY*HWPRRG Trigger: GCCCCTCCTGGGCCAATGTCAGTAGCACCTGAAACT...TTGGATGCCTAAAGAGGAGTGGGTGCACTTAATTATCTGAGGCATCTCCTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR GCA 90 bp | CGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCAGCCGGCTGCTGTCAGTTTaGTGCCTGTACGTTGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RHTTLVQQCLSNGHQQISRLLSV*CLYVGC Trigger: ACAGCCAACGTACAGGCAGCAAACTGACAGCAGCCG...GCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAGCACACTGTGACAAGGCCAATATGCACACGGGTGACGCCAGTAAGGCATCTAGTCTCTACCCTGTaGGTTTCTGGCCTGCCAATT | + |
|
Preference number: 2 (lower is better) Translates to: IKHTVTRPICTRVTPVRHLVSTL*VSGLPI Trigger: AATTGGCAGGCCAGAAACTCACAGGGTAGAGACTAG...ATGCCTTACTGGCGTCACCCGTGTGCATATTGGCCTTGTCACAGTGTGCTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR GCA 90 bp | AGAACACCGATCATGAGATTTGGCCTTCGAGCTCTGCTAAGTACCGAGGAGATGCTGCTGTCAGTTTGCTaGCTGTACGTTGGCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: RTPIMRFGLRALLSTEEMLLSVC*LYVGCL Trigger: GAGACAGCCAACGTACAGGCAGCAAACTGACAGCAG...CATCTCCTCGGTACTTAGCAGAGCTCGAAGGCCAAATCTCATGATCGGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | CGAATGGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTCTAGAACACCGATCATaGGATTTGGCCTTCGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RMGINRSANACHTRSLKTLEHRS*DLAFEL Trigger: GAGCTCGAAGGCCAAATCTCATGATCGGTGTTCTAG...AGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CAA 90 bp | CAACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTGCTaGAAAGCAAGGGTTTATTCGACCCCCAAGTCTAGCTGGAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QQISQCLSYTELEDC*KARVYSTPKSSWKE Trigger: CTCTTTCCAGCTAGACTTGGGGGTCGAATAAACCCTTGCTTTCAAGCAGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | CGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCAGCTTGACTGGGCTGATTTaGTGCAAATACCTCCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RHTTLVQQCLSNGHQQISLTGLI*CKYLQG Trigger: TCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAA...GCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR GCA 90 bp | ATCAAGCACACTGTGACAAGGCCAATATGCACACGGGTGACGCCAGTAAGGCATAATCTAGACCTTTCCTaGTCCTTCTGGAGTTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: IKHTVTRPICTRVTPVRHNLDLS*SFWSFR Trigger: CCTGAAACTCCAGAAGGAGCAGGAAAGGTCTAGATT...ATGCCTTACTGGCGTCACCCGTGTGCATATTGGCCTTGTCACAGTGTGCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAGCACACTGTGACAAGGCCAATATGCACACGGGTGACGCCAGTAAGGCATAGCTTGAAGACTGCTTaGAAGCAAGGGTTTATTCGA | + |
|
Preference number: 2 (lower is better) Translates to: IKHTVTRPICTRVTPVRHSLKTA*KQGFIR Trigger: TCGAATAAACCCTTGCTTTCAAGCAGTCTTCAAGCT...ATGCCTTACTGGCGTCACCCGTGTGCATATTGGCCTTGTCACAGTGTGCTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | CACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCAGCCAAGTCATACACGGAGCTTaGAGACTGCTTGAAAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HTTLVQQCLSNGHQQISQVIHGA*RLLESK Trigger: CTTGCTTTCAAGCAGTCTTCAAGCTCCGTGTATGAC...TTGGCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCCTGTCGAATGGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCGACCAAAATGCATTTTaGATTTACAGGCTCCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SACRMGINRSANACHTRSDQNAF*IYRLLV Trigger: AACCAGGAGCCTGTAAATGCAAAATGCATTTTGGTC...GCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR CCA 90 bp | TGCCGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCACCCCCAAGTCTAGCTaGAAAGAGAAGAGGATTTTA | + |
|
Preference number: 2 (lower is better) Translates to: CRHTTLVQQCLSNGHQQITPKSS*KEKRIL Trigger: TAAAATCCTCTTCTCTTTCCAGCTAGACTTGGGGGT...GATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CAA 90 bp | TTCTCTAGTCTCTACCCTGTGAGTTTCTGGCCTGCCAATTTCAACTaGAAGCTTGACTGGGCTGATTTGATGCAAATACCTCCAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FSSLYPVSFWPANFN*KLDWADLMQIPPGK Trigger: TTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACAGGGTAGAGACTAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAGAGAATTGGCAACTCCTTGCTATTCACAGGAGTGTCTCTTCGAACATATTCTGTCAGACTCGGCTaGTGTCAGTTTGCTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TKRIGNSLLFTGVSLRTYSVRLG*CQFAAC Trigger: ACAGGCAGCAAACTGACAGCAGCCGAGTCTGACAGA...ATATGTTCGAAGAGACACTCCTGTGAATAGCAAGGAGTTGCCAATTCTCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR GCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGCTCCTTCTCATGCATaGTTTCTTCTTTCTGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VICKNNGGKRDFRRGGRLAPSHA*FLLSGE Trigger: CTCCCCAGAAAGAAGAAAGCATGCATGAGAAGGAGC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGGAGGGAGACTCTGTaGTCCCCTTTGCTCCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGRETL*SPLLLL Trigger: GAGAAGGAGCAAAGGGGAGCACAGAGTCTCCCTCCC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCACAAGTTAACAATTTaGGAGCAGGGGAAAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VPSHHFSSTVPVEWASTDHKLTI*EQGKER Trigger: TCTTTCTTTCCCCTGCTCCCAAATTGTTAACTTGTG...ATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTCAGAAGAGAAAGGCAGCAAAGAGACAAATATTGTTCATGGTCCCACAAGCCCCAACACTCAAGCTaGAAATCTTTCCCTTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: CFRRERQQRDKYCSWSHKPQHSS*KSFPFS Trigger: GGAGAAAGGGAAAGATTTTCAGCTTGAGTGTTGGGG...CTTGTGGGACCATGAACAATATTTGTCTCTTTGCTGCCTTTCTCTTCTGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR CCA 90 bp | CGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCAGCAACTTGAAGCTTGACTaGGCTGATTTGATGCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: RHTTLVQQCLSNGHQQISNLKLD*ADLMQI Trigger: TATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTT...GCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CAA 90 bp | CAGGAGTGTCTCTTCGAACATATGTTTGTTACGTGTCTGTTTGGGTaGACCAAAATGCATTTTGCATTTACAGGCTCCTGGTTTCTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QECLFEHMFVTCLFG*TKMHFAFTGSWFLV Trigger: GACCAGAAACCAGGAGCCTGTAAATGCAAAATGCATTTTGGTCAACCCAAACAGACACGTAACAAACATATGTTCGAAGAGACACTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCACCCTCGTTACCCTCTaGACACTGTACAAGGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: RLEPLKSGKFLCSVFICATLVTL*TLYKDG Trigger: GCCATCCTTGTACAGTGTTCAGAGGGTAACGAGGGT...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAGAGAATTGGCAACTCCTTGCTATTCACAGGAGTGTCTCTTCGAACATATTGTGAGTTTCTGGCCTaGCAATTTCAACTTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: TKRIGNSLLFTGVSLRTYCEFLA*QFQLEA Trigger: AGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACA...ATATGTTCGAAGAGACACTCCTGTGAATAGCAAGGAGTTGCCAATTCTCTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR CCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCATCTAACTCTGTCTTaGCTGAACTGCCCCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RLEPLKSGKFLCSVFICAHLTLS*LNCPFC Trigger: ACAGAAGGGGCAGTTCAGCCAAGACAGAGTTAGATG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR GCA 90 bp | AATGCATTTTGCATTTACAGGCTCCTGGTTTCTGGTCTCTATGAACATTTAATCCCTCAGATAATTAAGTaGACCCACTCCTCTTTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NAFCIYRLLVSGLYEHLIPQIIK*THSSLG Trigger: GCCTAAAGAGGAGTGGGTGCACTTAATTATCTGAGG...GATTAAATGTTCATAGAGACCAGAAACCAGGAGCCTGTAAATGCAAAATGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR TCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACACAATGGGAAATTCATaGATAGCGAAAGGAAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYTMGNS*IAKGKC Trigger: ACACTTTCCTTTCGCTATTCATGAATTTCCCATTGT...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGAGTTGGAAGATTATaGAGCTCTAATGTGCAATAC | + |
|
Preference number: 2 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGVGRL*SSNVQY Trigger: GTATTGCACATTAGAGCTGCATAATCTTCCAACTCC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTGTTTTAGTCTTCCCTaGAGTTGGAAGATTATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRCFSLP*SWKIMQ Trigger: CTGCATAATCTTCCAACTCCAGGGAAGACTAAAACA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR GCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACAAGTATCTGCTCAATTaGCTCTGTATAGTCATTACA | + |
|
Preference number: 2 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYKYLLN*LCIVIT Trigger: TGTAATGACTATACAGAGGCAATTGAGCAGATACTT...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGAAAATATGTTTTTCTTaGCAACTTGAGGTGTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRKICFS*QLEVSH Trigger: GTGTGACACCTCAAGTTGGCAAGAAAAACATATTTT...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCTGTCGAATGGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCTCGGCTGCTGTCAGTTaGCTGCCTGTACGTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SACRMGINRSANACHTRSSAAVS*LPVRWL Trigger: CAGCCAACGTACAGGCAGCAAACTGACAGCAGCCGA...GCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 72 bp | CCCCCTCTCTGTCAGACTCGGCTGCTGTCAGTTTGCTaGCTGTACGTTGGCTGTCTCTTCTCTAGTCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PPLCQTRLLSVC*LYVGCLFSSLY Trigger: GTAGAGACTAGAGAAGAGACAGCCAACGTACAGGCAGCAAACTGACAGCAGCCGAGTCTGACAGAGAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR TCA 72 bp | CCAATCAGAGTAAGCAAACGTGAACCTAGGCAGGGCTaGGGGGCCCTAGTGGTGGGAGGTGTTCTGAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: PIRVSKREPRQG*GALVVGGVLNL Trigger: TAGATTCAGAACACCTCCCACCACTAGGGCCCCTCAGCCCTGCCTAGGTTCACGTTTGCTTACTCTGATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 72 bp | TGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCTGTaGTCCCCTTTGCTCCTTCTCATGCATGCTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: WKEGFQEGRETL*SPLLLLMHAFF Trigger: GAAGAAAGCATGCATGAGAAGGAGCAAAGGGGAGCACAGAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAGCACACTGTGACAAGGCCAATATGCACACGGGTGACGCCAGTAAGGCATTTTGCTGCCTGTACGTaGGCTGTCTCTTCTCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IKHTVTRPICTRVTPVRHFAACT*AVSSLV Trigger: GACTAGAGAAGAGACAGCCAACGTACAGGCAGCAAA...ATGCCTTACTGGCGTCACCCGTGTGCATATTGGCCTTGTCACAGTGTGCTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR TCA 72 bp | GCCAATGCCTGTCATACACGGAGCTTGAAGACTGCTTaGAAGCAAGGGTTTATTCGACCCCCAAGTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ANACHTRSLKTA*KQGFIRPPSLA Trigger: AGCTAGACTTGGGGGTCGAATAAACCCTTGCTTTCAAGCAGTCTTCAAGCTCCGTGTATGACAGGCATTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 72 bp | CAGTGCCTGTCGAATGGGCATCAACAGATCAGCCAATaGCTGTCATACACGGAGCTTGAAGACTGCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QCLSNGHQQISQ*LSYTELEDCLK Trigger: TTTCAAGCAGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CCA 72 bp | CCGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATaGGCATCAACAGATCAGCCAATGCCTGTCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: PSHHFSSTVPVE*ASTDQPMPVIH Trigger: GTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 72 bp | ATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTaGTTGAAAGCAAGGGTTTATTCGACCCCCAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ISQCLSYTELED*LKARVYSTPKS Trigger: AGACTTGGGGGTCGAATAAACCCTTGCTTTCAAGCAGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 72 bp | ACAAAACTGTGCCGTCACACCACTTTAGTTCAACAGTaGCTGTCGAATGGGCATCAACAGATCAGCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: TKLCRHTTLVQQ*LSNGHQQISQC Trigger: GCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACGGCACAGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 72 bp | CATGCAAACTCTGGTATAGCGATGACAGGAGCAGAATaGTTTATGCCATCTCTCCTAATGCCAGTCCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: HANSGIAMTGAE*FMPSLLMPVLT Trigger: GGTGAGGACTGGCATTAGGAGAGATGGCATAAAGCATTCTGCTCCTGTCATCGCTATACCAGAGTTTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CAA 90 bp | CACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCAGCCAAAGAATTGGCAACTCCTaGCTATTCACAGGAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTTLVQQCLSNGHQQISQRIGNS*LFTGVS Trigger: AGACACTCCTGTGAATAGCAAGGAGTTGCCAATTCT...TTGGCTGATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR GCA 72 bp | GCATCTCCAACCTTTGTTCACAGCTTAACAAAACTGTaGCGTCACACCACTTTAGTTCAACAGTGCCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: ASPTFVHSLTKL*RHTTLVQQCLS Trigger: CGACAGGCACTGTTGAACTAAAGTGGTGTGACGGCACAGTTTTGTTAAGCTGTGAACAAAGGTTGGAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CCA 72 bp | TGGGGAGAAAGAGTATGTTGCTCATGTGTTCTTTGTTaGTCCTGTCTCTTGTGGGTAGGGACACAGATATGC | + |
|
Preference number: 3 (lower is better) Translates to: WGERVCCSCVLC*SCLLWVGTQIC Trigger: GCATATCTGTGTCCCTACCCACAAGAGACAGGACCAACAAAGAACACATGAGCAACATACTCTTTCTCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CCA 72 bp | AGTTTCTGGCCTGCCAATTTCAACTTGAAGCTTGACTaGGCTGATTTGATGCAAATACCTCCAGGGAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: SFWPANFNLKLD*ADLMQIPPGKT Trigger: GGTTTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR TCA 72 bp | TTCATGCTAAGGGAGATGAACGCTGTTAGTTCTGGCTaGGAAATCTCATCTCTCTTGCCCAGTTTCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FMLREMNAVSSG*EISSLLPSFSE Trigger: TTCTGAGAAACTGGGCAAGAGAGATGAGATTTCTCAGCCAGAACTAACAGCGTTCATCTCCCTTAGCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGGGAGAAAGAGTATGTaGCTCATGTGTTCTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VICKNNGGKRDFRRGGRLGRKSM*LMCSLL Trigger: CAACAAAGAACACATGAGCAACATACTCTTTCTCCC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCCAAGTATCTGCTCAATaGCCTCTGTATAGTCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: VICKNNGGKRDFRRGGRLQVSAQ*PLYSHY Trigger: GTAATGACTATACAGAGGCAATTGAGCAGATACTTG...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR GCA 72 bp | TGTTACGTGTCTGTTTGGGTTGACCAAAATGCATTTTaGATTTACAGGCTCCTGGTTTCTGGTCTCTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: CYVSVWVDQNAF*IYRLLVSGLYE Trigger: TTCATAGAGACCAGAAACCAGGAGCCTGTAAATGCAAAATGCATTTTGGTCAACCCAAACAGACACGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR CAA 90 bp | AATGCATTTTGCATTTACAGGCTCCTGGTTTCTGGTCTCTATGAACATTTAATCCCTGCCAATTTCAACTaGAAGCTTGACTGGGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: NAFCIYRLLVSGLYEHLIPANFN*KLDWAD Trigger: ATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGG...GATTAAATGTTCATAGAGACCAGAAACCAGGAGCCTGTAAATGCAAAATGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCAGTCCTCACCAGGCTaGAAGATAGAGCTGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRQSSPG*KIELKI Trigger: TATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CCA 72 bp | GTGTCTCTTCGAACATATGTTTGTTACGTGTCTGTTTaGGTTGACCAAAATGCATTTTGCATTTACAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSLRTYVCYVSV*VDQNAFCIYRL Trigger: GAGCCTGTAAATGCAAAATGCATTTTGGTCAACCCAAACAGACACGTAACAAACATATGTTCGAAGAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR TCA 72 bp | TCTTTGGTGTTTCCCCCTCTTTTAGTATTAGTTCTGTaGGTGATGAGCATGCAAATGCGAGACTCAAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLVFPPLLVLVL*VMSMQMRDSNN Trigger: ATTATTTGAGTCTCGCATTTGCATGCTCATCACTCACAGAACTAATACTAAAAGAGGGGGAAACACCAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CCA 72 bp | GTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTaGAGGGCTTTCTTGTTTATGACCTTGGAAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VFDKKRRLCVMI*RAFLFMTLERN Trigger: ATTCCTTTCCAAGGTCATAAACAAGAAAGCCCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCCGCCTCGCGCTCGGCTaGTTCCCGCTCCTCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLRLALG*FPLLRL Trigger: GAGGCGGAGGAGCGGGAAGCAGCCGAGCGCGAGGCG...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGAATGGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTCTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RMGINRSANACHTRSLKTLVCAS*TGGHPP Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...AGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CAA 72 bp | TACAATGTGCGGGGGCTTCAGAGCACACACACTTGTTaGTGTGCATATCCAGGGCTCACAGCCTGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNVRGLQSTHTC*CAYPGLTAWHG Trigger: GCCATGCCAGGCTGTGAGCCCTGGATATGCACACAAACAAGTGTGTGTGCTCTGAAGCCCCCGCACATTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGTCGAATGGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCCCTCGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SACRMGINRSANACHTRSPRFSS*DWLVCA Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGAGG...GCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCGACAGGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS-3UTR GCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAGTCGTAGCCCGGGGATaGTGGTCTGGACTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVVVARG*WSGLVA Trigger: TGCCACCAGTCCAGACCAGCATCCCCGGGCTACGAC...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGGCTTCTCGCCCGAGTaGAGCCTCGAGTGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLGFSPE*SLECSI Trigger: TATCGAGCACTCGAGGCTGCACTCGGGCGAGAAGCC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CAA 72 bp | TTATTACAATGTGCGGGGGCTTCAGAGCACACACACTaGTTTGTGTGCATATCCAGGGCTCACAGCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQCAGASEHTH*FVCISRAHSLA Trigger: TGCCAGGCTGTGAGCCCTGGATATGCACACAAACAAGTGTGTGTGCTCTGAAGCCCCCGCACATTGTAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCTTGTGCGTCACCATATaGCTCTCGAGCTGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLLCVTI*LSSWVR Trigger: CCGCACCCAGCTCGAGAGGCATATGGTGACGCACAA...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCTCCAACGGCTCAGCCTaGAGCTCCTCGGAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLSNGSA*SSSEEK Trigger: CTTCTCTTCCGAGGAGCTGCAGGCTGAGCCGTTGGA...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATCGCCCTCCTTCTCGTaGTCCTTCTCGCTCTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVSPSFS*SFSLSP Trigger: TGGCGAGAGCGAGAAGGAGCACGAGAAGGAGGGCGA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCCTTGGTAGCAGCCCTTaGCTCATGTGTGGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLLGSSP*LMCGED Trigger: GTCCTCCCCACACATGAGCCAAGGGCTGCTACCAAG...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCCACCTAAAGGGCTGGTaGCTCCAAGCCCACCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLHLKGW*LQAHRS Trigger: TGAACGGTGGGCTTGGAGCCACCAGCCCTTTAGGTG...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AATTTCAACTTGAAGCTTGACTGGGCTGATTTGATGCAAATACCTCCAGGGAAATGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFNLKLDWADLMQIPPGKWDWLV*ASCTGG Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...TTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACGCCTCTCGAGCTGGGTaGGGTAGGCGAACGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYASRAG*GRRTCS Trigger: GCTACACGTTCGCCTACCGCACCCAGCTCGAGAGGC...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATTTCTTCTTGCCCGTTaGCCTCTGGCGTGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVFLLAR*PLACQG Trigger: GCCTTGGCACGCCAGAGGCCAACGGGCAAGAAGAAA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAGTACACCTAAAGGGCTaGTGGCTCCAAGCCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVVHLKG*WLQAHR Trigger: ACGGTGGGCTTGGAGCCACCAGCCCTTTAGGTGTAC...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCTGGTGGGGTTACTGTTaGGAGCTAACGGCTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLWWGYC*ELTAWR Trigger: CCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCA...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATCTCGTGGCGGTACTTaGTGTGCTCCTTCAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVSRGGT*CAPSAM Trigger: CATCGCTGAAGGAGCACATCAAGTACCGCCACGAGA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCACTGATCTGTCTCCTTaGGTCGGTGGTCAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLTDLSP*VGGQAL Trigger: CAGAGCTTGACCACCGACTCAAGGAGACAGATCAGT...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICALVCAS*TGGHPP Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCGTTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICARWPLA*QGETAP Trigger: AGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAACG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCCTCCTCAGGGGCTTCTaGGTAAATAATGGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLLLRGF*VNNGRV Trigger: GACACGGCCATTATTTACCCAGAAGCCCCTGAGGAG...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTTGCCCGTTGGCCTCTaGCGTGCCAAGGCGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRLPVGL*RAKARQ Trigger: CTGTCTCGCCTTGGCACGCCAGAGGCCAACGGGCAA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGTGCTGATCTGTCCCTaGCTTGTGCGTCACCATATG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLVLICP*LVRHHM Trigger: CATATGGTGACGCACAAGCCAGGGACAGATCAGCAC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAGTCTCCTTGAGTCGGTaGTCAAGCTCTGGAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVVSLSR*SSSGGK Trigger: CTTGCCTCCAGAGCTTGACCACCGACTCAAGGAGAC...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCTGGGAGCTAACGGCTTaGAGGTCCTTTCCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLWELTA*RSFPVM Trigger: CATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCA...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGGTAGCTGCTCCCGTTaGGTAGGTATAGGCCATATG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLGSCSR*VGIGHM Trigger: CATATGGCCTATACCTACCCAACGGGAGCAGCTACC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICAWDWLV*ASCTGG Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGCTGGGCTGGTGTCCTaGTCCAGAGGGTTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRAGLVS*SRGFAR Trigger: CCTTGCAAACCCTCTGGACCAGGACACCAGCCCAGC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCGGTGGTGCTTGTACTTaGAGGCCTTGCCACACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICAGGACT*RPCHTP Trigger: CGGAGTGTGGCAAGGCCTTCAAGTACAAGCACCACC...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATTAGTGGCACCGTTATaGCTCACTACTGGAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVLVAPL*LTTGRP Trigger: CGGTCTTCCAGTAGTGAGTCATAACGGTGCCACTAA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVSFTNS*GRPTAM Trigger: CATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCCTCCGCCTCCCGCTTaGAGTAGGAGTACCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICAPPPPA*SRSTCD Trigger: ATCACAGGTACTCCTACTGCAAGCGGGAGGCGGAGG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVFSSWD*LVCASC Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTGTGGGGAGGACTCATaGTTGGGCATGCTAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRCGEDS*LGMLAG Trigger: CCCAGCTAGCATGCCCAACCATGAGTCCTCCCCACA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCCCTTGGCTCATGTGTaGGGAGGACTCATGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRPLAHV*GGLMVG Trigger: CCCAACCATGAGTCCTCCCCACACATGAGCCAAGGG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTACTGGATCGTGGCTTCTaGCCCCATTGCATCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVLDRGF*PHCIII Trigger: GATTATGATGCAATGGGGCCAGAAGCCACGATCCAG...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCAGGTGTTCTTTCAGGTaGTGCTTGTACTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLRCSFR*CLYLKA Trigger: GGCCTTCAAGTACAAGCACCACCTGAAAGAACACCT...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CAA 72 bp | CCTGCCAATTTCAACTTGAAGCTTGACTGGGCTGATTaGATGCAAATACCTCCAGGGAAAACCCTGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PANFNLKLDWAD*MQIPPGKTLKL Trigger: CAGTTTCAGGGTTTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| 3UTR CAA 72 bp | CTCTACCCTGTGAGTTTCTGGCCTGCCAATTTCAACTaGAAGCTTGACTGGGCTGATTTGATGCAAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: LYPVSFWPANFN*KLDWADLMQIP Trigger: AGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACAGGGTAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS-3UTR TCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCCTCGGAAAGTACAGATaGCAAGAGGAGGGCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLLGKYR*QEEGFI Trigger: AATAAAGCCCTCCTCTTGTCATCTGTACTTTCCGAG...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCTGTCGTCCATCGAGTaGTCCCCAGTCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICALSSIE*SPVSSS Trigger: TGAGGAAGAGACTGGGGATCACTCGATGGACGACAG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCCACTGTGCCAGCTGTaGTCCACAACACTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRPLCQL*STTLSL Trigger: AAGGGAGAGTGTTGTGGAGCACAGCTGGCACAGTGG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTCTGTCCCTGGCTTGTaGGTCACCATATGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRSVPGL*VTICLS Trigger: CGAGAGGCATATGGTGACGCACAAGCCAGGGACAGA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACGAGTGCAGCCTCGAGTaGTCGATAAGGTGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYECSLE*SIRWCL Trigger: CAAACACCACCTTATCGAGCACTCGAGGCTGCACTC...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGAATTGGCAACTCCTTGCTATTCACAGGAGTGTCTCTTCGAACATATTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKRIGNSLLFTGVSLRTYFSSWD*LVCASC Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...ATATGTTCGAAGAGACACTCCTGTGAATAGCAAGGAGTTGCCAATTCTCTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCATCTGGAGTTCCAGGTaGCAGGTCATTTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLIWSSR*QVIFFL Trigger: CAAGAAGAAAATGACCTGCCACCTGGAACTCCAGAT...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCTACCCCTTGTTCTTCTaGCTGAGAACATGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLYPLFF*LRTWIL Trigger: AAGGATCCATGTTCTCAGCCAGAAGAACAAGGGGTA...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTACGACAGGGGGAATATTaGGAGAAGTTACCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVRQGEY*EKLPLV Trigger: AACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCG...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAGTTATGACTCACTACTaGAAGACCGACAGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVVMTHY*KTDRGN Trigger: ATTCCCCCTGTCGGTCTTCCAGTAGTGAGTCATAAC...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGAGTTCTGCTATAGATaGCGATGTGATGGAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLEFCYR*RCDGVH Trigger: ATGGACTCCATCACATCGCCATCTATAGCAGAACTC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGGAAGAGAAGCTATTTaGAGTGTACGAGCTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLGREAI*SVRATV Trigger: CACAGTAGCTCGTACACTCCAAATAGCTTCTCTTCC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCAGAATCTCGCCACTGTaGCAGCTGTGCTCCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICARISPL*QLCSTT Trigger: TGTTGTGGAGCACAGCTGGCACAGTGGCGAGATTCT...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGAGGTCATTTTCTTCTTaGCCGTTGGCCTCTGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRRSFSS*PLASGV Trigger: CACGCCAGAGGCCAACGGGCAAGAAGAAAATGACCT...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTGGCGGTACTTGATGTaGTCCTTCAGCGATGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYWRYLM*SFSDVK Trigger: CTTGACATCGCTGAAGGAGCACATCAAGTACCGCCA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCCACGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRPRFSS*DWLVCA Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTGG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTTGTGGTCTGGATCGTaGCTTCTGGCCCCATTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRLWSGS*LLAPLH Trigger: ATGCAATGGGGCCAGAAGCCACGATCCAGACCACAA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCTTGGGCAAAAGCATCTaGAGTTCCAGGTGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICALGKSI*SSRWQV Trigger: GACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAA...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCGGGCAGGTCAGCAGTTaGGCAAAAGCATCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICAGQVSS*AKASGV Trigger: AACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCC...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCTCGGTGGTCAAGCTCTaGAGGCAAGCTTTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICASVVKL*RQALAS Trigger: TGAAGCCAAAGCTTGCCTCCAGAGCTTGACCACCGA...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACCATGTGGTCCTTGTATaGGTTGATGGGGCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYHVVLV*VDGACQ Trigger: CTGACAAGCCCCATCAACCCATACAAGGACCACATG...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGTATTACTCCTCGAGTaGTCCAGTTTATCAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLVLLLE*SSLSTA Trigger: AGCAGTTGATAAACTGGACCACTCGAGGAGTAATAC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAAATCTGACACTGGTGTaGTCTCTTTCCTGTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVNLTLV*SLSCVF Trigger: GAACACACAGGAAAGAGACCACACCAGTGTCAGATT...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACGGGAAGAACCCGTCTTaGTATTGTTTCTCATTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYGKNPS*YCFSFG Trigger: GCCGAATGAGAAACAATATCAAGACGGGTTCTTCCC...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGGACTATGTTTTCATaGGGTTGCAGGACTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGTMFS*GCRTAL Trigger: CAAGGCAGTCCTGCAACCTCATGAAAACATAGTCCC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCTGGTCCAGAGGGTTTaGAAGGCTATCATCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRLVQRV*KAIIFS Trigger: GCTGAAGATGATAGCCTTGCAAACCCTCTGGACCAG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATTGCAGTCCATCTTTTaGCTAGAAACCGTATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVLQSIF*LETVLS Trigger: GGACAATACGGTTTCTAGGCAAAAGATGGACTGCAA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAATGAGGTTGCAGGACTaGCTTGATCTCTTCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVMRLQD*LDLFIH Trigger: ATGAATGAAGAGATCAAGGCAGTCCTGCAACCTCAT...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTTGTTAATTGTGGTCTaGATCGTGGCTTCTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRLLIVV*IVASGP Trigger: GGGGCCAGAAGCCACGATCCAGACCACAATTAACAA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTCTTCATTCTTCTCGTaGCGGTACTTGATGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYSSFFS*RYLMCS Trigger: GGAGCACATCAAGTACCGCCACGAGAAGAATGAAGA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCAAACTCCAGCTTTGTTaGGGACTATGTTTTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLKLQLC*GLCFHE Trigger: CTCATGAAAACATAGTCCCCAACAAAGCTGGAGTTT...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CAA 72 bp | CTCTTCGAACATATGTTTGTTACGTGTCTGTTTGGGTaGACCAAAATGCATTTTGCATTTACAGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFEHMFVTCLFG*TKMHFAFTGSW Trigger: CCAGGAGCCTGTAAATGCAAAATGCATTTTGGTCAACCCAAACAGACACGTAACAAACATATGTTCGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS-3UTR TCA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGTATTCCTCAAAGTCTaGTGTGCAATTTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VICKNNGGKRDFRRGGRLVFLKV*CAICIL Trigger: AAGAATGCAAATTGCACATCAGACTTTGAGGAATAC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCCTTGTTCTTCTGGCTaGGAACATGGATCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRPCSSG*EHGSFM Trigger: CATGAAGGATCCATGTTCTCAGCCAGAAGAACAAGG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACGTTGCAGGACTGCCTTaGTCTCTTCATTCATCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYVAGLP*SLHSSY Trigger: GTAAGATGAATGAAGAGATCAAGGCAGTCCTGCAAC...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACAAGATTTTGTTAGCCTaGGAGGAGGATCACAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYKILLA*EEDHNS Trigger: CGAGTTGTGATCCTCCTCTCAGGCTAACAAAATCTT...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACGAGAGAAGCGTTTCTTaGAGTTTGGGCATTCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYERSVS*SLGIRK Trigger: CTTACGAATGCCCAAACTGCAAGAAACGCTTCTCTC...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAGTTTTACAGGAGACCTaGGTAACAAAGAGTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVVLQET*VTKSLL Trigger: CAAAAGACTCTTTGTTACCCAGGTCTCCTGTAAAAC...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTACATTTCTTGCTGCTaGTATGTGAACTGTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYYISCC*YVNCRT Trigger: GGTCCTACAGTTCACATATCAGCAGCAAGAAATGTA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGCTTCTGGCCCCATTaGATCATAATCTTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGFWPH*IIIFLH Trigger: ATGAAGGAAGATTATGATGCAATGGGGCCAGAAGCC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCTGTTCTTTCAGGTGGTaGTTGTACTTGAAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICACSFRW*LYLKAL Trigger: CAAGGCCTTCAAGTACAAGCACCACCTGAAAGAACA...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACACTGTTGTGGAGTTCTaGTATAGATGGCGATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYTVVEF*YRWRCD Trigger: ATCACATCGCCATCTATAGCAGAACTCCACAACAGT...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTTCTGGCTGAGAACATaGATCCTTCATGTGATAACC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYFWLRT*ILHVIT Trigger: GGTTATCACATGAAGGATCCATGTTCTCAGCCAGAA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTACTTTCTTTACAGAACTaGCATGAAAATGGAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVLSLQN*HENGVD Trigger: ATCCACTCCATTTTCATGCCAGTTCTGTAAAGAAAG...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGAAGGCCCACAGCAATaGAGATTTTCAGCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWREGPQQ*RFSAVH Trigger: ATGAACTGCTGAAAATCTCCATTGCTGTGGGCCTTC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRLVTLL*SSAIDG Trigger: GCCATCTATAGCAGAACTCCACAACAGTGTTACGAG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGAGTGCTCGATAAGGTaGTGTTTGTGTTTGAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRECSIR*CLCLNA Trigger: AGCGTTCAAACACAAACACCACCTTATCGAGCACTC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTCATCTTCAGCAATGTaGAGCTTGTCCTCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRSSSAM*SLSSSS Trigger: AGATGAAGAGGACAAGCTTCACATTGCTGAAGATGA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCTTTCTTTATGTTACTaGTCTGTCTCCTTGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICALSLCY*SVSLSR Trigger: CCGACTCAAGGAGACAGATCAGTAACATAAAGAAAG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTTTACAGAACTGGCATaGAAATGGAGTGGATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYFTELA*KWSGYA Trigger: AGCATATCCACTCCATTTTCATGCCAGTTCTGTAAA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCTTCAGTACAGACATGTaGTCCTTGTATGGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICAFSTDM*SLYGLM Trigger: CATCAACCCATACAAGGACCACATGTCTGTACTGAA...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAGAAGAAACACTGTTGTaGTCTAAGTTTATGCTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CQSSPGLKIELKICFLQVEETLL*SKFMLV Trigger: TACTAGCATAAACTTAGACCACAACAGTGTTTCTTC...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| 3UTR CAA 72 bp | AAAAGGAGATTATGTGTCATGATTTGGAGGGCTTTCTaGTTTATGACCTTGGAAAGGAATCCTAGGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRLCVMIWRAF*FMTLERNPRIS Trigger: ACTTATCCTAGGATTCCTTTCCAAGGTCATAAACAAGAAAGCCCTCCAAATCATGACACATAATCTCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCAACTTGTTCCTTAACTaGGTAATGGCTGAGTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICANLFLN*VMAELV Trigger: TACTAACTCAGCCATTACTCAGTTAAGGAACAAGTT...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCAAGCTTTGGCTTCATTaGCTTTCTCTAAGGTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICAKLWLH*LSLRYS Trigger: ACTATACCTTAGAGAAAGTCAATGAAGCCAAAGCTT...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGTTCATAGCATAGTATaGTTTCAGTACAGACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRVHSIV*FQYRHV Trigger: CACATGTCTGTACTGAAAGCATACTATGCTATGAAC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCTCAGACATGCTAAGTaGTTTTCCATTTTCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRLRHAK*FSIFQL Trigger: AAGTTGGAAAATGGAAAACCACTTAGCATGTCTGAG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCACTAAACCCATGTGTTaGCATAAGAACTTTATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLEPLKSGKFLCSVFICATKPMC*HKNFIV Trigger: GACTATAAAGTTCTTATGGCAACACATGGGTTTAGT...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS CCA 90 bp | TCCTCTCTTGGTAGCAGCCCTTGGCTCATGTGTGGGGAGGACTCATaGTTGGGCATGCTAGCTGGGCTGGTGTCCTGGTCCAGAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGSSPWLMCGEDS*LGMLAGLVSWSRGF Trigger: AAACCCTCTGGACCAGGACACCAGCCCAGCTAGCATGCCCAACCATGAGTCCTCCCCACACATGAGCCAAGGGCTGCTACCAAGAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS TCA 90 bp | TGGGATTGGCTTGTTTGCGCCTCTTGCACCGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATAAGAGCGGATCAGATGGCAGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: WDWLVCASCTGGHPP*SAASLIRADQMAVR Trigger: GCGAACTGCCATCTGATCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028229.13 ENSMUST00000201490.2 ENSMUST00000201804.4 |
||
| CDS GCA 90 bp | TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATTGTTTGGTGTGTTGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LIRADQMAVRMDSAP*FGSTQARLFGVLHS Trigger: CGAGTGCAACACACCAAACAATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028229.13 |
||
| CDS CCA 90 bp | GTTGGCCTCTGGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTCTaGGTAAATAATGGCCGTGTCGCTTCGCTGAAGGTACTCTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGLWRAKARQLLRGF*VNNGRVASLKVLFD Trigger: ATCGAAGAGTACCTTCAGCGAAGCGACACGGCCATTATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 |
||
| CDS CCA 90 bp | TGGAGTTCCAGGTGGCAGGTCATTTTCTTCTTGCCCGTTGGCCTCTaGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTCTGGGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: WSSRWQVIFFLPVGL*RAKARQLLRGFWVN Trigger: ATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAACGGGCAAGAAGAAAATGACCTGCCACCTGGAACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 |
||
| CDS GCA 90 bp | TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTCTTCCTCAGAAAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LIRADQMAVRMDSAP*FGSTQARSLPQKSP Trigger: AGGACTTTTCTGAGGAAGAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201490.2 |
||
| CDS GCA 90 bp | GATCTGTCCCTGGCTTGTGCGTCACCATATGCCTCTCGAGCTGGGTaGGGTAGGCGAACGTGTAGCTACAAAGAGGGCAGGAAAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLSLACASPYASRAG*GRRTCSYKEGRKSS Trigger: AGAACTTTTCCTGCCCTCTTTGTAGCTACACGTTCGCCTACCGCACCCAGCTCGAGAGGCATATGGTGACGCACAAGCCAGGGACAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS-3UTR CAA 90 bp | GTGCCGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAACAGATCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSHHFSSTVPVEWASTDLGLAC*RLLHRG Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...ATCTGTTGATGCCCATTCGACAGGCACTGTTGAACTAAAGTGGTGTGACGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS TCA 90 bp | AGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTGGACTCTaGGCAGATGGGTGTACACCTAAAGGGCTGGTGGCTCCAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKGASIPTPKCCIGL*ADGCTPKGLVAPSP Trigger: TGGGCTTGGAGCCACCAGCCCTTTAGGTGTACACCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS-3UTR CAA 90 bp | CGAATGGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RMGINRSANACHTRSLKTPPGIG*FAPLAP Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...AGTCTTCAAGCTCCGTGTATGACAGGCATTGGCTGATCTGTTGATGCCCATTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS TCA 90 bp | GTGTCCTGGTCCAGAGGGTTTGCAAGGCTATCATCTTCAGCAATGTaGAGCTTGTCCTCTTCATCTGTCTCCGAGCCTGCGTCCACTACG | + |
|
Preference number: 5 (lower is better) Translates to: VSWSRGFARLSSSAM*SLSSSSVSEPASTT Trigger: CGTAGTGGACGCAGGCTCGGAGACAGATGAAGAGGACAAGCTTCACATTGCTGAAGATGATAGCCTTGCAAACCCTCTGGACCAGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000127520.8 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS CCA 90 bp | CAGGAGACCTGGGTAACAAAGAGTCTTTTGTGGTGGGGTTACTGTTaGGAGCTAACGGCTTGGAGGTCCTTTCCAGTGATGGTGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QETWVTKSLLWWGYC*ELTAWRSFPVMVTW Trigger: CCAGGTCACCATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGACTCTTTGTTACCCAGGTCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS GCA 90 bp | ATGGTTGGGCATGCTAGCTGGGCTGGTGTCCTGGTCCAGAGGGTTTaGAAGGCTATCATCTTCAGCAATGTGAAGCTTGTCCTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: MVGHASWAGVLVQRV*KAIIFSNVKLVLFI Trigger: GATGAAGAGGACAAGCTTCACATTGCTGAAGATGATAGCCTTGCAAACCCTCTGGACCAGGACACCAGCCCAGCTAGCATGCCCAACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS CCA 90 bp | CAGGTCCAACGGCTCAGCCTGCAGCTCCTCGGAAGAGAAGCTATTTaGAGTGTACGAGCTACTGTGGGAGTTTTTAGAAGATGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVQRLSLQLLGREAI*SVRATVGVFRRCGG Trigger: TCCTCCACATCTTCTAAAAACTCCCACAGTAGCTCGTACACTCCAAATAGCTTCTCTTCCGAGGAGCTGCAGGCTGAGCCGTTGGACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS-3UTR CAA 90 bp | AATTTCAACTTGAAGCTTGACTGGGCTGATTTGATGCAAATACCTCCAGGGAAAGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: NFNLKLDWADLMQIPPGKACLRL*HRGPSA Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...TTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCAGTTTGCTGCCTGTACGTTGGCTGTCTCTTCTCTAGTCTCTACCCTGTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CCQFAACTLAVSSLVSTLFFLLG*ACLRLL Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...CAGGGTAGAGACTAGAGAAGAGACAGCCAACGTACAGGCAGCAAACTGACAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS GCA 90 bp | ATCTTCAGCAATGTGAAGCTTGTCCTCTTCATCTGTCTCCGAGCCTaGGTCCACTACGTTGTCATAGTTCACCACGTTTTTCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFSNVKLVLFICLRA*VHYVVIVHHVFPPG Trigger: CCCAGGAGGAAAAACGTGGTGAACTATGACAACGTAGTGGACGCAGGCTCGGAGACAGATGAAGAGGACAAGCTTCACATTGCTGAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000127520.8 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS GCA 90 bp | GGTTCTCTCATTTGTTTTGGTAATGACAGGTCCAACGGCTCAGCCTaGAGCTCCTCGGAAGAGAAGCTATTTGGAGTGTACGAGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLICFGNDRSNGSA*SSSEEKLFGVYELL Trigger: CAGTAGCTCGTACACTCCAAATAGCTTCTCTTCCGAGGAGCTGCAGGCTGAGCCGTTGGACCTGTCATTACCAAAACAAATGAGAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CCA 90 bp | TGGCACCGTTATGACTCACTACTGGAAGACCGACAGGGGGAATATTaGGAGAAGTTACCCCTTGTTCTTCTGGCTGAGAACATGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: WHRYDSLLEDRQGEY*EKLPLVLLAENMDP Trigger: AGGATCCATGTTCTCAGCCAGAAGAACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCGGTCTTCCAGTAGTGAGTCATAACGGTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICAACLRL*HRGPSA Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCTTTTCTTCTTGCCCGTaGGCCTCTGGCGTGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VICKNNGGKRDFRRGGRLFSSCP*ASGVPR Trigger: CCTTGGCACGCCAGAGGCCAACGGGCAAGAAGAAAA...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACGGGGAGGACTCATGGTaGGGCATGCTAGCTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYGEDSW*GMLAGL Trigger: CAGCCCAGCTAGCATGCCCAACCATGAGTCCTCCCC...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS GCA 90 bp | TGTACCATTGTTAATTGTGGTCTGGATCGTGGCTTCTGGCCCCATTaGATCATAATCTTCCTTCATTTCTGGACCGGCTACAGAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTIVNCGLDRGFWPH*IIIFLHFWTGYRGL Trigger: CAAGCCTCTGTAGCCGGTCCAGAAATGAAGGAAGATTATGATGCAATGGGGCCAGAAGCCACGATCCAGACCACAATTAACAATGGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076836.13 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICALGLAC*RLLHRG Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCAGTTTGCTGCCTGTACGTTGGCTGTCTCTTCTCTAGTCTCTACCCTGTATGTCAAGTCGATTTaGCACCATCGGGAAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CCQFAACTLAVSSLVSTLYVKSI*HHREKV Trigger: TACCTTTTCCCGATGGTGCAAAATCGACTTGACATA...CAGGGTAGAGACTAGAGAAGAGACAGCCAACGTACAGGCAGCAAACTGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153561.6 |
||
| CDS CCA 90 bp | TGTTGGGAGCTAACGGCTTGGAGGTCCTTTCCAGTGATGGTGACCTaGAATTCGAATACTGGTAGACTTTTCTTTGCTCAAACCATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CWELTAWRSFPVMVT*NSNTGRLFFAQTIP Trigger: AGGAATGGTTTGAGCAAAGAAAAGTCTACCAGTATTCGAATTCCAGGTCACCATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACGTGGTGGGGTTACTGTaGGGAGCTAACGGCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYVVGLL*GANGLE Trigger: CTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCAC...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS TCA 90 bp | CAAAGTACGCAACTTCTCTTTCTTTATGTTACTGATCTGTCTCCTTaGGTCGGTGGTCAAGCTCTGGAGGCAAGCTTTGGCTTCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QSTQLLFLYVTDLSP*VGGQALEASFGFID Trigger: GTCAATGAAGCCAAAGCTTGCCTCCAGAGCTTGACCACCGACTCAAGGAGACAGATCAGTAACATAAAGAAAGAGAAGTTGCGTACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS GCA 90 bp | TTTCAGCAGTTCATCAGAGTTGGGCTCCATGTTCATAGCATAGTATaGTTTCAGTACAGACATGTGGTCCTTGTATGGGTTGATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FQQFIRVGLHVHSIV*FQYRHVVLVWVDGA Trigger: AGCCCCATCAACCCATACAAGGACCACATGTCTGTACTGAAAGCATACTATGCTATGAACATGGAGCCCAACTCTGATGAACTGCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCACCGGCTACAGAGGCTaGCAGAATCTCGCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICATGYRG*QNLATV Trigger: CACAGTGGCGAGATTCTGCAAGCCTCTGTAGCCGGT...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGGGCAGGTCAGCAGTaGGGCAAAAGCATCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGAGQQ*GKSIWS Trigger: ACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTCCGTGCACTTGAACTaGCGGTTACCTGCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYSVHLN*RLPAPW Trigger: CCAAGGAGCAGGTAACCGCAAGTTCAAGTGCACGGA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATCTTTCAGGTGGTGCTaGTACTTGAAGGCCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQSSPGLKIELKICFLQVSFRWC*YLKALP Trigger: TGGCAAGGCCTTCAAGTACAAGCACCACCTGAAAGA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAACAGACATGTGGTCCTaGTATGGGTTGATGGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CQSSPGLKIELKICFLQVTDMWS*YGLMGL Trigger: AAGCCCCATCAACCCATACAAGGACCACATGTCTGT...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS TCA 90 bp | CAGCTTTGTTGGGGACTATGTTTTCATGAGGTTGCAGGACTGCCTTaGTCTCTTCATTCATCTTACACAGGTATCGTTCATGCTGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLCWGLCFHEVAGLP*SLHSSYTGIVHADA Trigger: TGCATCAGCATGAACGATACCTGTGTAAGATGAATGAAGAGATCAAGGCAGTCCTGCAACCTCATGAAAACATAGTCCCCAACAAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS GCA 90 bp | AACTCCAGCTTTGTTGGGGACTATGTTTTCATGAGGTTGCAGGACTaGCTTGATCTCTTCATTCATCTTACACAGGTATCGTTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSSFVGDYVFMRLQD*LDLFIHLTQVSFML Trigger: CAGCATGAACGATACCTGTGTAAGATGAATGAAGAGATCAAGGCAGTCCTGCAACCTCATGAAAACATAGTCCCCAACAAAGCTGGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CCA 90 bp | GATTTTGTTAGCCTGAGAGGAGGATCACAACTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGCGATGTGATGGAGTCCATAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DFVSLRGGSQLVTLL*SSAIDGDVMESIGF Trigger: AAAACCTATGGACTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTTACGAGTTGTGATCCTCCTCTCAGGCTAACAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CCA 90 bp | TGCAGCTCCTCGGAAGAGAAGCTATTTGGAGTGTACGAGCTACTGTaGGAGTTTTTAGAAGATGTGGAGGAAAGATTTAAAGGAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSSSEEKLFGVYELL*EFLEDVEERFKGEG Trigger: TCCTTCTCCTTTAAATCTTTCCTCCACATCTTCTAAAAACTCCCACAGTAGCTCGTACACTCCAAATAGCTTCTCTTCCGAGGAGCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACCCTGGTCCAGAGGGTTaGCAAGGCTATCATCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYPGPEG*QGYHLQ Trigger: CTGAAGATGATAGCCTTGCAAACCCTCTGGACCAGG...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCAGGTCATTTTCTTCTaGCCCGTTGGCCTCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRQVIFF*PVGLWR Trigger: ACGCCAGAGGCCAACGGGCAAGAAGAAAATGACCTG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTTCTCGTGGCGGTACTaGATGTGCTCCTTCAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYFSWRY*MCSFSD Trigger: ATCGCTGAAGGAGCACATCAAGTACCGCCACGAGAA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCAGGTGGTGCTTGTACTaGAAGGCCTTGCCACACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICARWCLY*KALPHS Trigger: GGAGTGTGGCAAGGCCTTCAAGTACAAGCACCACCT...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGAAATGTCTTCCGTCTaGCAGTCCATCTTTTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VICKNNGGKRDFRRGGRLEMSSV*QSIFCL Trigger: TAGGCAAAAGATGGACTGCAAGACGGAAGACATTTC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACTTGGGAGCTAACGGCTaGGAGGTCCTTTCCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYLGANG*EVLSSD Trigger: ATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAA...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS TCA 90 bp | GTATGGGTTGATGGGGCTTGTCAGTCCTTTCTCGGAAAGTACAGATaGCAAGAGGAGGGCTTTATTATCAACAAAAACTCCAGCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VWVDGACQSFLGKYR*QEEGFIINKNSSFV Trigger: AACAAAGCTGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTCCGAGAAAGGACTGACAAGCCCCATCAACCCATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS-3UTR CAA 90 bp | GTAATTTGTAAAAACAATGGTGGAAAGAGGGATTTCAGGAGGGGAGGGAGACTCGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VICKNNGGKRDFRRGGRLEPVLI*FLIRPF Trigger: AAATGGCCGAATGAGAAACAATATCAAGACGGGTTC...GAGTCTCCCTCCCCTCCTGAAATCCCTCTTTCCACCATTGTTTTTACAAATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCACCTAAGTGCTGCATaGGACTCTGAGCAGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRHLSAA*DSEQMG Trigger: ACCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCCCGACAGGGGGAATATaGGGAGAAGTTACCCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICAPTGGI*GEVTPC Trigger: ACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCGG...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS TCA 90 bp | ATCTCTTTCCTCCAGTTTTCTTTTGGCAAAGTATTCCTCAAAGTCTaGTGTGCAATTTGCATTCTTAACTGGACCGGCTACAGAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISFLQFSFGKVFLKV*CAICILNWTGYRGL Trigger: CAAGCCTCTGTAGCCGGTCCAGTTAAGAATGCAAATTGCACATCAGACTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGAAAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICAFFLLG*ACLRLL Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGGAGAAGTTACCCCTaGTTCTTCTGGCTGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGRSYP*FFWLRT Trigger: TGTTCTCAGCCAGAAGAACAAGGGGTAACTTCTCCC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTACAACTCGTAACACTGTaGTGGAGTTCTGCTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CQSSPGLKIELKICFLQVQLVTL*WSSAID Trigger: ATCTATAGCAGAACTCCACAACAGTGTTACGAGTTG...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAGTCTTCCCTGGAGTTGGAAGATTATGCAGCTCTAATGTGCAATACATGCCGAACACAGGGTaGTTGCTTTTATTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVLVFPGVGRLCSSNVQYMPNTG*LLLLSR Trigger: CCTGGACAATAAAAGCAACAACCCTGTGTTCGGCAT...GTATTGCACATTAGAGCTGCATAATCTTCCAACTCCAGGGAAGACTAAAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTATCCTCCAGTTTTCTTTaGGCAAAGTATTCCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CQSSPGLKIELKICFLQVSSSFL*AKYSSK Trigger: CTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGA...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGEEPV*ILFLIR Trigger: CCGAATGAGAAACAATATCAAGACGGGTTCTTCCCC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGAGCAGTTCATCAGAGTaGGGCTCCATGTTCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRSSSSE*GSMFIA Trigger: TGCTATGAACATGGAGCCCAACTCTGATGAACTGCT...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCGGAAGAGAAGCTATTaGGAGTGTACGAGCTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRRKRSY*ECTSYC Trigger: ACAGTAGCTCGTACACTCCAAATAGCTTCTCTTCCG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTCCTCACCAGGCTTGAAGATAGAGCTGAAAATATGCTTTCTACAAGTAAAACCAATACATTTCTaGCTGCTGATATGTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: CQSSPGLKIELKICFLQVKPIHF*LLICEL Trigger: CAGTTCACATATCAGCAGCAAGAAATGTATTGGTTT...TACTTGTAGAAAGCATATTTTCAGCTCTATCTTCAAGCCTGGTGAGGACTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGCTTGCAGTCCATCTTTaGCCTAGAAACCGTATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRLAVHL*PRNRIV Trigger: GACAATACGGTTTCTAGGCAAAAGATGGACTGCAAG...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGGTTGCAGGACTGCCTaGATCTCTTCATTCATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRGCRTA*ISSFIL Trigger: TAAGATGAATGAAGAGATCAAGGCAGTCCTGCAACC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCTATGTTTTCATGAGGTaGCAGGACTGCCTTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICAYVFMR*QDCLDL Trigger: GAGATCAAGGCAGTCCTGCAACCTCATGAAAACATA...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGGTAACAAAGAGTCTTTaGTGGTGGGGTTACTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRVTKSL*WWGYCW Trigger: CCAACAGTAACCCCACCACAAAAGACTCTTTGTTAC...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS TCA 90 bp | TCAGACATGCTAAGTGGTTTTCCATTTTCCAACTTGTTCCTTAACTaGGTAATGGCTGAGTTAGTAGGAGAAGAAGAAACAGAATTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SDMLSGFPFSNLFLN*VMAELVGEEETELG Trigger: CCCTAATTCTGTTTCTTCTTCTCCTACTAACTCAGCCATTACTCAGTTAAGGAACAAGTTGGAAAATGGAAAACCACTTAGCATGTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CCA 90 bp | TTCAGAGGCTCATCTGAATTCTCAGACGATGAAGAAACACTGTTGTaGTCTAAGTTTATGCTAGTAGCTTTTGTTTTGTTCTTTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FRGSSEFSDDEETLL*SKFMLVAFVLFFVA Trigger: AGCCACAAAGAACAAAACAAAAGCTACTAGCATAAACTTAGACCACAACAGTGTTTCTTCATCGTCTGAGAATTCAGATGAGCCTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCGTTCTCTCATTTGTTTaGGTAATGACAGGTCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICAVLSFV*VMTGPT Trigger: CGTTGGACCTGTCATTACCAAAACAAATGAGAGAAC...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCGATAACCTTTCAACTTaGAAATGTCTTCCGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICADNLST*KCLPSC Trigger: GCAAGACGGAAGACATTTCAAAGTTGAAAGGTTATC...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGGGAAGAGTATTCGATAAGAAAAGGAGATTATGTGTCATGATTTGGAGGTTCTTAACTGTACCATaGTTAATTGTGGTCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: NKGRVFDKKRRLCVMIWRFLTVP*LIVVWI Trigger: GATCCAGACCACAATTAACAATGGTACAGTTAAGAA...CCTCCAAATCATGACACATAATCTCCTTTTCTTATCGAATACTCTTCCCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTAGAGCCTTTAAAATCGGGAAAATTTCTATGTAGTGTATTTATTTGTGCCGTGGCTATAATACCTTaGGGTTCTCTCATTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLEPLKSGKFLCSVFICAVAIIP*GSLICF Trigger: AAAACAAATGAGAGAACCCAAAGGTATTATAGCCAC...GGCACAAATAAATACACTACATAGAAATTTTCCCGATTTTAAAGGCTCTAGGCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176438.9 |
||
| CDS TCA 90 bp | ATCTCTTTCCTCCAGTTTTCTTTTGGCAAAGTATTCCTCAAAGTCTaGTGTGCAATTTGCATTCTTAACTGTACCATTGTTAATTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISFLQFSFGKVFLKV*CAICILNCTIVNCG Trigger: ACCACAATTAACAATGGTACAGTTAAGAATGCAAATTGCACATCAGACTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGAAAGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000201804.4 |
||
| CDS GCA 72 bp | GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTCTTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ADQMAVRMDSAP*FGSTQARSLPQ Trigger: CTGAGGAAGAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201490.2 |
||
| CDS GCA 72 bp | GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATTGTTTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ADQMAVRMDSAP*FGSTQARLFGV Trigger: CACACCAAACAATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028229.13 |
||
| CDS CCA 72 bp | GGTAGCAGCCCTTGGCTCATGTGTGGGGAGGACTCATaGTTGGGCATGCTAGCTGGGCTGGTGTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSSPWLMCGEDS*LGMLAGLVSWS Trigger: GGACCAGGACACCAGCCCAGCTAGCATGCCCAACCATGAGTCCTCCCCACACATGAGCCAAGGGCTGCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS GCA 72 bp | GCAGGTCATTTTCTTCTTGCCCGTTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCTCAGGGGCTTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGHFLLARWPLA*QGETAPQGLLG Trigger: ACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAACGGGCAAGAAGAAAATGACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 |
||
| CDS GCA 72 bp | GTTCCAGGTGGCAGGTCTGGACCGGCTACAGAGGCTTaGAGAATCTCGCCACTGTGCCAGCTGTGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VPGGRSGPATEA*RISPLCQLCST Trigger: TGTGGAGCACAGCTGGCACAGTGGCGAGATTCTGCAAGCCTCTGTAGCCGGTCCAGACCTGCCACCTGGAAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176732.8 |
||
| CDS CCA 72 bp | AGGTGGCAGGTCATTTTCTTCTTGCCCGTTGGCCTCTaGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RWQVIFFLPVGL*RAKARQLLRGF Trigger: GAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAACGGGCAAGAAGAAAATGACCTGCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 |
||
| CDS CAA 72 bp | AGCAGCCCTTGGCTCATGTGTGGGGAGGACTCATGGTaGGGCATGCTAGCTGGGCTGGTGTCCTGGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSPWLMCGEDSW*GMLAGLVSWSR Trigger: TCTGGACCAGGACACCAGCCCAGCTAGCATGCCCAACCATGAGTCCTCCCCACACATGAGCCAAGGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS GCA 72 bp | CTGGCTTGTGCGTCACCATATGCCTCTCGAGCTGGGTaGGGTAGGCGAACGTGTAGCTACAAAGAGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LACASPYASRAG*GRRTCSYKEGR Trigger: CCTGCCCTCTTTGTAGCTACACGTTCGCCTACCGCACCCAGCTCGAGAGGCATATGGTGACGCACAAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CCA 72 bp | GAGTTCCAGGTGGCAGGTCATTTTCTTCTTGCCCGTTaGCCTCTGGCGTGCCAAGGCGAGACAGCTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EFQVAGHFLLAR*PLACQGETAPQ Trigger: CTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAACGGGCAAGAAGAAAATGACCTGCCACCTGGAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 |
||
| CDS CAA 90 bp | TCTCTTGGTAGCAGCCCTTGGCTCATGTGTGGGGAGGACTCATGGTaGGGCATGCTAGCTGGGCTGGTGTCCTGGTCCAGAGGGTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLGSSPWLMCGEDSW*GMLAGLVSWSRGFA Trigger: TGCAAACCCTCTGGACCAGGACACCAGCCCAGCTAGCATGCCCAACCATGAGTCCTCCCCACACATGAGCCAAGGGCTGCTACCAAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS GCA 72 bp | GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATATCTTCAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: ADQMAVRMDSAP*FGSTQARYLQN Trigger: ATTTTGAAGATATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201804.4 |
||
| CDS CCA 72 bp | TGGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTCTaGGTAAATAATGGCCGTGTCGCTTCGCTGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: WRAKARQLLRGF*VNNGRVASLKV Trigger: TACCTTCAGCGAAGCGACACGGCCATTATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 |
||
| CDS TCA 72 bp | CTTGTTTGCGCCTCTTGCACCGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATAAGAGCGGATCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LVCASCTGGHPP*SAASLIRADQM Trigger: CATCTGATCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028229.13 ENSMUST00000201490.2 ENSMUST00000201804.4 |
||
| CDS CCA 72 bp | CCACTACGTTGTCATAGTTCACCACGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCCTCTTGCACCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRCHSSPRFSS*DWLVCASCTGG Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTGGTGAACTATGACAACGTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 15 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000127520.8 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201490.2 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS CCA 72 bp | GACTCATGGTTGGGCATGCTAGCTGGGCTGGTGTCCTaGTCCAGAGGGTTTGCAAGGCTATCATCTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DSWLGMLAGLVS*SRGFARLSSSA Trigger: TGCTGAAGATGATAGCCTTGCAAACCCTCTGGACCAGGACACCAGCCCAGCTAGCATGCCCAACCATGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS GCA 72 bp | GCTTCGGCAGCACGCAGGCTCGATTGTTTGGTGTGTTaGACTCGCGAGGGGATCAGAGACAAGAATTACATC | + |
|
Preference number: 6 (lower is better) Translates to: ASAARRLDCLVC*TREGIRDKNYI Trigger: GATGTAATTCTTGTCTCTGATCCCCTCGCGAGTGCAACACACCAAACAATCGAGCCTGCGTGCTGCCGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028229.13 |
||
| CDS GCA 72 bp | TCTTCCTTCATTTCTTCTGGACCGGCTACAGAGGCTTaGAGAATCTCGCCACTGTGCCAGCTGTGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SSFISSGPATEA*RISPLCQLCST Trigger: TGTGGAGCACAGCTGGCACAGTGGCGAGATTCTGCAAGCCTCTGTAGCCGGTCCAGAAGAAATGAAGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202432.4 |
||
| CDS GCA 72 bp | CATGCTAGCTGGGCTGGTGTCCTGGTCCAGAGGGTTTaGAAGGCTATCATCTTCAGCAATGTGAAGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HASWAGVLVQRV*KAIIFSNVKLV Trigger: GACAAGCTTCACATTGCTGAAGATGATAGCCTTGCAAACCCTCTGGACCAGGACACCAGCCCAGCTAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS GCA 72 bp | CAATTTGCATTCTTAACTGGACCGGCTACAGAGGCTTaGAGAATCTCGCCACTGTGCCAGCTGTGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: QFAFLTGPATEA*RISPLCQLCST Trigger: TGTGGAGCACAGCTGGCACAGTGGCGAGATTCTGCAAGCCTCTGTAGCCGGTCCAGTTAAGAATGCAAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 |
||
| CDS CCA 72 bp | CTTTTGTGGTGGGGTTACTGTTGGGAGCTAACGGCTTaGAGGTCCTTTCCAGTGATGGTGACCTGGAATTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLWWGYCWELTA*RSFPVMVTWNS Trigger: CGAATTCCAGGTCACCATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CAA 72 bp | GTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATaGGACTCTGAGCAGATGGGTGTACACCTAAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VKGLPSLHLSAA*DSEQMGVHLKG Trigger: GCCCTTTAGGTGTACACCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 90 bp | GAAATCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATaGGACTCTGAGCAGATGGGTGTACACCTAAAGGGCTGGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EIQVKGLPSLHLSAA*DSEQMGVHLKGWWL Trigger: GAGCCACCAGCCCTTTAGGTGTACACCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 90 bp | ACAGGAGACCTGGGTAACAAAGAGTCTTTTGTGGTGGGGTTACTGTaGGGAGCTAACGGCTTGGAGGTCCTTTCCAGTGATGGTGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: TGDLGNKESFVVGLL*GANGLEVLSSDGDL Trigger: CAGGTCACCATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGACTCTTTGTTACCCAGGTCTCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS TCA 72 bp | TCCAGAGGGTTTGCAAGGCTATCATCTTCAGCAATGTaGAGCTTGTCCTCTTCATCTGTCTCCGAGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SRGFARLSSSAM*SLSSSSVSEPA Trigger: CGCAGGCTCGGAGACAGATGAAGAGGACAAGCTTCACATTGCTGAAGATGATAGCCTTGCAAACCCTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000127520.8 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS CCA 72 bp | TTACAGGAGACCTGGGTAACAAAGAGTCTTTTGTGGTaGGGTTACTGTTGGGAGCTAACGGCTTGGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQETWVTKSLLW*GYCWELTAWRS Trigger: GGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGACTCTTTGTTACCCAGGTCTCCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CCA 72 bp | CGGCTCAGCCTGCAGCTCCTCGGAAGAGAAGCTATTTaGAGTGTACGAGCTACTGTGGGAGTTTTTAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLSLQLLGREAI*SVRATVGVFRR Trigger: TCTTCTAAAAACTCCCACAGTAGCTCGTACACTCCAAATAGCTTCTCTTCCGAGGAGCTGCAGGCTGAGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CAA 72 bp | TCTTTTGTGGTGGGGTTACTGTTGGGAGCTAACGGCTaGGAGGTCCTTTCCAGTGATGGTGACCTGGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SFVVGLLLGANG*EVLSSDGDLEF Trigger: GAATTCCAGGTCACCATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CCA 72 bp | TGGGTAACAAAGAGTCTTTTGTGGTGGGGTTACTGTTaGGAGCTAACGGCTTGGAGGTCCTTTCCAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: WVTKSLLWWGYC*ELTAWRSFPVM Trigger: CATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGACTCTTTGTTACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CCA 72 bp | AGCCTGAGAGGAGGATCACAACTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGCGATGTGATGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRGGSQLVTLL*SSAIDGDVMES Trigger: GGACTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTTACGAGTTGTGATCCTCCTCTCAGGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CAA 72 bp | CTGGGTAACAAAGAGTCTTTTGTGGTGGGGTTACTGTaGGGAGCTAACGGCTTGGAGGTCCTTTCCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LGNKESFVVGLL*GANGLEVLSSD Trigger: ATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGACTCTTTGTTACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS GCA 72 bp | ATTTGTTTTGGTAATGACAGGTCCAACGGCTCAGCCTaGAGCTCCTCGGAAGAGAAGCTATTTGGAGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ICFGNDRSNGSA*SSSEEKLFGVY Trigger: GTACACTCCAAATAGCTTCTCTTCCGAGGAGCTGCAGGCTGAGCCGTTGGACCTGTCATTACCAAAACAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CCA 72 bp | TATGACTCACTACTGGAAGACCGACAGGGGGAATATTaGGAGAAGTTACCCCTTGTTCTTCTGGCTGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: YDSLLEDRQGEY*EKLPLVLLAEN Trigger: GTTCTCAGCCAGAAGAACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCGGTCTTCCAGTAGTGAGTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 72 bp | AAGACCGACAGGGGGAATATTGGGAGAAGTTACCCCTaGTTCTTCTGGCTGAGAACATGGATCCTTCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: KTDRGNIGRSYP*FFWLRTWILHV Trigger: CACATGAAGGATCCATGTTCTCAGCCAGAAGAACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCGGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 72 bp | GTTAGCCTGAGAGGAGGATCACAACTCGTAACACTGTaGTGGAGTTCTGCTATAGATGGCGATGTGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSLRGGSQLVTL*WSSAIDGDVME Trigger: CTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTTACGAGTTGTGATCCTCCTCTCAGGCTAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CAA 90 bp | CACTACTGGAAGACCGACAGGGGGAATATTGGGAGAAGTTACCCCTaGTTCTTCTGGCTGAGAACATGGATCCTTCATGTGATAACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: HYWKTDRGNIGRSYP*FFWLRTWILHVITF Trigger: AAAGGTTATCACATGAAGGATCCATGTTCTCAGCCAGAAGAACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCGGTCTTCCAGTAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS GCA 72 bp | AATGTGAAGCTTGTCCTCTTCATCTGTCTCCGAGCCTaGGTCCACTACGTTGTCATAGTTCACCACGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NVKLVLFICLRA*VHYVVIVHHVF Trigger: AAAAACGTGGTGAACTATGACAACGTAGTGGACGCAGGCTCGGAGACAGATGAAGAGGACAAGCTTCACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000127520.8 ENSMUST00000176438.9 ENSMUST00000176732.8 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 ENSMUST00000201969.4 ENSMUST00000202187.4 ENSMUST00000202935.4 |
||
| CDS CCA 72 bp | ATTCCTTCACAAATTCCTGAGGAAGGCCCACAGCAATaGAGATTTTCAGCAGTTCATCAGAGTTGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IPSQIPEEGPQQ*RFSAVHQSWAP Trigger: TGGAGCCCAACTCTGATGAACTGCTGAAAATCTCCATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 90 bp | GAAGATTTTGTTAGCCTGAGAGGAGGATCACAACTCGTAACACTGTaGTGGAGTTCTGCTATAGATGGCGATGTGATGGAGTCCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: EDFVSLRGGSQLVTL*WSSAIDGDVMESIG Trigger: ACCTATGGACTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTTACGAGTTGTGATCCTCCTCTCAGGCTAACAAAATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS TCA 72 bp | ATCTCTTCATTCATCTTACACAGGTATCGTTCATGCTaGTGCAGGGGAATAGGGCCCGGGAAGCTTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ISSFILHRYRSC*CRGIGPGKLSL Trigger: TAAAGAAAGCTTCCCGGGCCCTATTCCCCTGCATCAGCATGAACGATACCTGTGTAAGATGAATGAAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS GCA 72 bp | AGGAGGATCACAACTCGTAACACTGTTGTGGAGTTCTaGTATAGATGGCGATGTGATGGAGTCCATAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RRITTRNTVVEF*YRWRCDGVHRF Trigger: AAACCTATGGACTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTTACGAGTTGTGATCCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CCA 72 bp | ATAGTATGCTTTCAGTACAGACATGTGGTCCTTGTATaGGTTGATGGGGCTTGTCAGTCCTTTCTCGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IVCFQYRHVVLV*VDGACQSFLGK Trigger: CTTTCCGAGAAAGGACTGACAAGCCCCATCAACCCATACAAGGACCACATGTCTGTACTGAAAGCATACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CCA 72 bp | CTAACGGCTTGGAGGTCCTTTCCAGTGATGGTGACCTaGAATTCGAATACTGGTAGACTTTTCTTTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LTAWRSFPVMVT*NSNTGRLFFAQ Trigger: TTGAGCAAAGAAAAGTCTACCAGTATTCGAATTCCAGGTCACCATCACTGGAAAGGACCTCCAAGCCGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS TCA 72 bp | GATGGGGCTTGTCAGTCCTTTCTCGGAAAGTACAGATaGCAAGAGGAGGGCTTTATTATCAACAAAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: DGACQSFLGKYR*QEEGFIINKNS Trigger: GGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTCCGAGAAAGGACTGACAAGCCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CCA 72 bp | AGGGGGAATATTGGGAGAAGTTACCCCTTGTTCTTCTaGCTGAGAACATGGATCCTTCATGTGATAACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RGNIGRSYPLFF*LRTWILHVITF Trigger: AAAGGTTATCACATGAAGGATCCATGTTCTCAGCCAGAAGAACAAGGGGTAACTTCTCCCAATATTCCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CCA 72 bp | ACAACTCGTAACACTGTTGTGGAGTTCTGCTATAGATaGCGATGTGATGGAGTCCATAGGTTTTACAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TTRNTVVEFCYR*RCDGVHRFYRR Trigger: TCTCCTGTAAAACCTATGGACTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTTACGAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS TCA 72 bp | TGGGGACTATGTTTTCATGAGGTTGCAGGACTGCCTTaGTCTCTTCATTCATCTTACACAGGTATCGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WGLCFHEVAGLP*SLHSSYTGIVH Trigger: ATGAACGATACCTGTGTAAGATGAATGAAGAGATCAAGGCAGTCCTGCAACCTCATGAAAACATAGTCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS TCA 72 bp | ACTTTTCTTTGCTCAAACCATTCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATGGAGATTTTCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TFLCSNHSFTNS*GRPTAMEIFSS Trigger: ACTGCTGAAAATCTCCATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGAATGGTTTGAGCAAAGAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS GCA 72 bp | TTTGTTGGGGACTATGTTTTCATGAGGTTGCAGGACTaGCTTGATCTCTTCATTCATCTTACACAGGTATCG | + |
|
Preference number: 6 (lower is better) Translates to: FVGDYVFMRLQD*LDLFIHLTQVS Trigger: CGATACCTGTGTAAGATGAATGAAGAGATCAAGGCAGTCCTGCAACCTCATGAAAACATAGTCCCCAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS GCA 72 bp | TTCATCAGAGTTGGGCTCCATGTTCATAGCATAGTATaGTTTCAGTACAGACATGTGGTCCTTGTATGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FIRVGLHVHSIV*FQYRHVVLVWV Trigger: AACCCATACAAGGACCACATGTCTGTACTGAAAGCATACTATGCTATGAACATGGAGCCCAACTCTGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 72 bp | CTCACTGCGTGGCCATCTCTTTCCTCCAGTTTTCTTTaGGCAAAGTATTCCTCAAAGTCTGATGTGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LTAWPSLSSSFL*AKYSSKSDVQF Trigger: AAATTGCACATCAGACTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGAAAGAGATGGCCACGCAGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 ENSMUST00000201804.4 |
||
| CDS CAA 72 bp | AACTCCAGCTTTGTTGGGGACTATGTTTTCATGAGGTaGCAGGACTGCCTTGATCTCTTCATTCATCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: NSSFVGDYVFMR*QDCLDLFIHLT Trigger: TGTAAGATGAATGAAGAGATCAAGGCAGTCCTGCAACCTCATGAAAACATAGTCCCCAACAAAGCTGGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS TCA 72 bp | CTCCAGTTTTCTTTTGGCAAAGTATTCCTCAAAGTCTaGTGTGCAATTTGCATTCTTAACTGGACCGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LQFSFGKVFLKV*CAICILNWTGY Trigger: GTAGCCGGTCCAGTTAAGAATGCAAATTGCACATCAGACTTTGAGGAATACTTTGCCAAAAGAAAACTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000200844.4 ENSMUST00000201211.4 ENSMUST00000201623.4 |
||
| CDS CAA 72 bp | GAGAACATGGATCCTTCATGTGATAACCTTTCAACTTaGAAATGTCTTCCGTCTTGCAGTCCATCTTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ENMDPSCDNLST*KCLPSCSPSFA Trigger: GGCAAAAGATGGACTGCAAGACGGAAGACATTTCAAAGTTGAAAGGTTATCACATGAAGGATCCATGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 72 bp | CTCCTCGAGTGGTCCAGTTTATCAACTGCTTTAATATaGGTGAAATGGGAAGATTTTGTTAGCCTGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLEWSSLSTALI*VKWEDFVSLRG Trigger: TCCTCTCAGGCTAACAAAATCTTCCCATTTCACCAATATTAAAGCAGTTGATAAACTGGACCACTCGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CAA 90 bp | GAAATGTCTTCCGTCTTGCAGTCCATCTTTTGCCTAGAAACCGTATaGTCCACAATCTGTAGAACCTTTTGTACCTCACTCAAGTTACTA | + |
|
Preference number: 6 (lower is better) Translates to: EMSSVLQSIFCLETV*STICRTFCTSLKLL Trigger: TAGTAACTTGAGTGAGGTACAAAAGGTTCTACAGATTGTGGACAATACGGTTTCTAGGCAAAAGATGGACTGCAAGACGGAAGACATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 90 bp | GGAGTATTACTCCTCGAGTGGTCCAGTTTATCAACTGCTTTAATATaGGTGAAATGGGAAGATTTTGTTAGCCTGAGAGGAGGATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: GVLLLEWSSLSTALI*VKWEDFVSLRGGSQ Trigger: TTGTGATCCTCCTCTCAGGCTAACAAAATCTTCCCATTTCACCAATATTAAAGCAGTTGATAAACTGGACCACTCGAGGAGTAATACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CAA 72 bp | GAAGAAACAGAATTAGGGGAAGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTTACTGATATTAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: EETELGEEPVLI*FLIRPFTDIKP Trigger: TGGTTTAATATCAGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTTCCCCTAATTCTGTTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 72 bp | CTGTTGTGGTCTAAGTTTATGCTAGTAGCTTTTGTTTaGTTCTTTGTGGCTATAATACCTTTGGGTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLWSKFMLVAFV*FFVAIIPLGSL Trigger: GAGAGAACCCAAAGGTATTATAGCCACAAAGAACAAAACAAAAGCTACTAGCATAAACTTAGACCACAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS CAA 90 bp | GTAGGAGAAGAAGAAACAGAATTAGGGGAAGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTTACTGATATTAAACCAATACATTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGEEETELGEEPVLI*FLIRPFTDIKPIHF Trigger: GAAATGTATTGGTTTAATATCAGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTTCCCCTAATTCTGTTTCTTCTTCTCCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 90 bp | GAGTTAGTAGGAGAAGAAGAAACAGAATTAGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGGCCATTTACTGATATTAAACCAATA | + |
|
Preference number: 6 (lower is better) Translates to: ELVGEEETELGEEPV*ILFLIRPFTDIKPI Trigger: TATTGGTTTAATATCAGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTTCCCCTAATTCTGTTTCTTCTTCTCCTACTAACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 ENSMUST00000201804.4 |
||
| CDS CAA 90 bp | AAATTCAGAGGCTCATCTGAATTCTCAGACGATGAAGAAACACTGTaGTGGTCTAAGTTTATGCTAGTAGCTTTTGTTTTGTTCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: KFRGSSEFSDDEETL*WSKFMLVAFVLFFV Trigger: CACAAAGAACAAAACAAAAGCTACTAGCATAAACTTAGACCACAACAGTGTTTCTTCATCGTCTGAGAATTCAGATGAGCCTCTGAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||
| CDS TCA 72 bp | CTCCAGTTTTCTTTTGGCAAAGTATTCCTCAAAGTCTaGTGTGCAATTTGCATTCTTAACTGTACCATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQFSFGKVFLKV*CAICILNCTIV Trigger: AACAATGGTACAGTTAAGAATGCAAATTGCACATCAGACTTTGAGGAATACTTTGCCAAAAGAAAACTGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000201804.4 |
||
| CDS CCA 72 bp | GAAAGATTTAAAGGAGAAGGAGTATTACTCCTCGAGTaGTCCAGTTTATCAACTGCTTTAATATTGGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ERFKGEGVLLLE*SSLSTALILVK Trigger: TTTCACCAATATTAAAGCAGTTGATAAACTGGACCACTCGAGGAGTAATACTCCTTCTCCTTTAAATCTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028229.13 ENSMUST00000068415.11 ENSMUST00000076836.13 ENSMUST00000176438.9 ENSMUST00000177302.8 ENSMUST00000200844.4 |
||