Pregenerated sensors for ZDHHC9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036985Ensembl transcript IDs: ENSMUST00000037960.11, ENSMUST00000088935.4
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTaGAGCGGGATACCCGGAGGGTGGGGCAGCAGTGCTGGGCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: EAPGVVTVARGGLRP*SGIPGGWGSSAGLS Trigger: GGAAAGCCCAGCACTGCTGCCCCACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR TCA 90 bp | TCTGGGACTCTGCCGGTGGAAGTGCTGGAAGAGCAGGGGCTTAGATaGAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SGTLPVEVLEEQGLR*SPWCGYRCQRWAEA Trigger: GGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCCCCTGCTCTTCCAGCACTTCCACCGGCAGAGTCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 90 bp | AGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTaGCTTCCCCATTTGTGCATTCACGGCCTCTGTAGGCCTTACACA | + |
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Preference number: 1 (lower is better) Translates to: RRGEERRGEESLSVP*LPHLCIHGLCRPYT Trigger: TGTGTAAGGCCTACAGAGGCCGTGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR GCA 90 bp | ATTCCCTGGCCAGAGGTCTCTGTGACTGCCTCTGGACTCGGGACATaGAGCAGCTGGAAAGGACTGGAGTCAGTCTTGAGACTCTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: IPWPEVSVTASGLGT*SSWKGLESVLRLFS Trigger: GCTAAAGAGTCTCAAGACTGACTCCAGTCCTTTCCAGCTGCTGCATGTCCCGAGTCCAGAGGCAGTCACAGAGACCTCTGGCCAGGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 90 bp | CCAGAGGTCTCTGTGACTGCCTCTGGACTCGGGACATGCAGCAGCTaGAAAGGACTGGAGTCAGTCTTGAGACTCTTTAGCCCCAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: PEVSVTASGLGTCSS*KGLESVLRLFSPRK Trigger: CTTTCTGGGGCTAAAGAGTCTCAAGACTGACTCCAGTCCTTTCCAGCTGCTGCATGTCCCGAGTCCAGAGGCAGTCACAGAGACCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR GCA 90 bp | CAAGTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATaGTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: QVEGTCPIPKRIGWQ*WHFGARRILQRPSP Trigger: TGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 90 bp | GAGGGAAGAGGAGGGGAGTCCAAGGATACCTTGTGGCTGAGACAATaGGAAACCAACCAGTGCCATGTCCCAAGAGACCCATTTGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: EGRGGESKDTLWLRQ*ETNQCHVPRDPFVQ Trigger: CTGGACAAATGGGTCTCTTGGGACATGGCACTGGTTGGTTTCCCATTGTCTCAGCCACAAGGTATCCTTGGACTCCCCTCCTCTTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 90 bp | CCAATCCTTAGTTCTGAAGGAGTCAAGAGCCCAGTTAGAATTCCCTaGCCAGAGGTCTCTGTGACTGCCTCTGGACTCGGGACATGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PILSSEGVKSPVRIP*PEVSVTASGLGTCS Trigger: GCTGCATGTCCCGAGTCCAGAGGCAGTCACAGAGACCTCTGGCCAGGGAATTCTAACTGGGCTCTTGACTCCTTCAGAACTAAGGATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTaGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATC | + |
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Preference number: 1 (lower is better) Translates to: VEGTCPIPKRIGWQC*HFGARRILQRPSPI Trigger: GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGGGCCAGAGGTCTCTGTaGCTGCCTCTGGACTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVGQRSL*LPLDSG Trigger: TCCCGAGTCCAGAGGCAGTCACAGAGACCTCTGGCC...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGAGAGGTCTCTGTGACTaGCTCTGGACTCGGGACATG | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVRGLCD*LWTRDM Trigger: CATGTCCCGAGTCCAGAGGCAGTCACAGAGACCTCT...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGTGGGGCAGCAGTGCTaGGCTTTCCCTCACTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GLDEAPGVVTVARGGLRPVGQQC*AFPHSA Trigger: GGCTGAGTGAGGGAAAGCCCAGCACTGCTGCCCCAC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGTGGCTTCCCCATTTGTaGATTCACGGCCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVWLPHL*IHGLCR Trigger: CCTACAGAGGCCGTGAATGCACAAATGGGGAAGCCA...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGGCAATGCTGGCACTTTaGAGCCAGGAGAATCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVAMLAL*SQENPP Trigger: TGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGC...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGAGAGGTCTCTGTGACTaGCTCTGGACTCGGGACATG | + |
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Preference number: 2 (lower is better) Translates to: EERRGEERRGEESLSVPWRGLCD*LWTRDM Trigger: CATGTCCCGAGTCCAGAGGCAGTCACAGAGACCTCT...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTATTGGCTGGCAATGCTaGCACTTTGGAGCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GLDEAPGVVTVARGGLRPIGWQC*HFGARR Trigger: TCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAAT...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGCAAGTGGAAGGTACCTaGCCTATTCCTAAAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVQVEGT*PIPKRI Trigger: AATCCTTTTAGGAATAGGGCAGGTACCTTCCACTTG...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAAGGGGAGCTAGGATCTaGAGGGAAGAGGAGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: EERRGEPLCALASPFVHSRGARI*REEEGS Trigger: ACTCCCCTCCTCTTCCCTCCAGATCCTAGCTCCCCT...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCACTCTGTGACTGCCTCTaGACTCGGGACATGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: EERRGEPLCALASPFVHSLCDCL*TRDMQQ Trigger: CTGCTGCATGTCCCGAGTCCAGAGGCAGTCACAGAG...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CAA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTaGTGCATTCACGGCCTCTGTAGGCCTTACACAAGAAGTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ERRGEESLSVPWLPH*CIHGLCRPYTRSLR Trigger: CCTCAGACTTCTTGTGTAAGGCCTACAGAGGCCGTGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGATGCCGGTAATTGGGTaGCTAAAGACCAAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVMPVIG*LKTKEK Trigger: TTTTTCTTTGGTCTTTAGTCACCCAATTACCGGCAT...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCGGCCAGAGGTCTCTGTaGCTGCCTCTGGACTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: PRKSSRQDPGLEREKHRCGQRSL*LPLDSG Trigger: TCCCGAGTCCAGAGGCAGTCACAGAGACCTCTGGCC...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGATGAAAGTGGACTCATaGGCAAAGAGGGGAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: EERRGEERRGEESLSVPWMKVDS*AKRGDE Trigger: CTCATCTCCCCTCTTTGCTCATGAGTCCACTTTCAT...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGGTCAAAAGGAGAAAATaGAAGTGGACTCATGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVVKRRK*KWTHEQ Trigger: TTGCTCATGAGTCCACTTTCATTTTCTCCTTTTGAC...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAGGGGTAGTGTTTAAGTaGGCACTCAGGCTTCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: EERRGEPLCALASPFVHSGVVFK*ALRLPL Trigger: CAGGGGAAGCCTGAGTGCTCACTTAAACACTACCCC...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGTTGTGGCTGAGACAATaGGAAACCAACCAGTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: EERRGEERRGEESLSVPWLWLRQ*ETNQCH Trigger: ATGGCACTGGTTGGTTTCCCATTGTCTCAGCCACAA...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGTCCAAGGATACCTTGTaGCTGAGACAATGGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: EERRGEERRGEESLSVPWSKDTL*LRQWET Trigger: GGTTTCCCATTGTCTCAGCCACAAGGTATCCTTGGA...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAGGGACATGCAGCAGCTaGAAAGGACTGGAGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: EERRGEPLCALASPFVHSGTCSS*KGLESV Trigger: GACTGACTCCAGTCCTTTCCAGCTGCTGCATGTCCC...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTTCCAGTTGCCAGATGTaGCTGGCATCTTCTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: ERRGEESLSVPWLPHLCISSCQM*LASSAT Trigger: AGTGGCAGAAGATGCCAGTCACATCTGGCAACTGGA...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGGTATTATCTCTACCATaGCTACTTACGTATAGCATC | + |
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Preference number: 2 (lower is better) Translates to: GYRCQRWAEALERDTRRVVLSLP*LLTYSI Trigger: GATGCTATACGTAAGTAGTCATGGTAGAGATAATAC...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCTGGTGTGGTTACCGTTaGCAGAGGTGGGCTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PRKSSRQDPGLEREKHRCWCGYR*QRWAEA Trigger: GGCCTCAGCCCACCTCTGGCAACGGTAACCACACCA...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGAAGGGGAGCTAGGATCTaGAGGGAAGAGGAGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: FGARRILQRPSPILSSEGRGARI*REEEGS Trigger: ACTCCCCTCCTCTTCCCTCCAGATCCTAGCTCCCCT...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGAGGGGCTGTGTTGTTaGCATCTCATCAATGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: GLDEAPGVVTVARGGLRPEGLCC*HLINAY Trigger: ATAAGCATTGATGAGATGCCAACAACACAGCCCCTC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCCCAGAAAGAGACCAATaGCCCCCAGCAGGGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PRKSSRQDPGLEREKHRCPERDQ*PPAGEL Trigger: TAGCTCCCCTGCTGGGGGTCATTGGTCTCTTTCTGG...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCTCCAAGGATACCTTGTaGCTGAGACAATGGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: WQCWHFGARRILQRPSPISKDTL*LRQWET Trigger: GGTTTCCCATTGTCTCAGCCACAAGGTATCCTTGGA...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CAA 90 bp | GTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTaGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: VPALFLKGLAGNAGT*EPGESSSVPLQSLV Trigger: AACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCAGGATTGGCTGGCAATaGTGGCACTTTGGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PRKSSRQDPGLEREKHRCRIGWQ*WHFGAR Trigger: CCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCT...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTGGGACATGCAGCAGCTaGAAAGGACTGGAGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFGTCSS*KGLESV Trigger: GACTGACTCCAGTCCTTTCCAGCTGCTGCATGTCCC...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGAGTCACCAGTTAGAATTCCCTaGCCAGAGGTCTCTGTGACT | + |
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Preference number: 2 (lower is better) Translates to: EPGESSSVPLQSLVLKESPVRIP*PEVSVT Trigger: AGTCACAGAGACCTCTGGCCAGGGAATTCTAACTGG...TGACTCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTTCCAGTTGCCAGATGTaGCTGGCATCTTCTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFSSCQM*LASSAT Trigger: AGTGGCAGAAGATGCCAGTCACATCTGGCAACTGGA...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGTATTATCTCTACCATaGCTACTTACGTATAGCATC | + |
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Preference number: 2 (lower is better) Translates to: GLDEAPGVVTVARGGLRPVLSLP*LLTYSI Trigger: GATGCTATACGTAAGTAGTCATGGTAGAGATAATAC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCGAAGATGCCGGTAATTaGGTGACTAAAGACCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: WQCWHFGARRILQRPSPIEDAGN*VTKDQR Trigger: TCTTTGGTCTTTAGTCACCCAATTACCGGCATCTTC...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGACCAGTTAGAATTCCCTaGCCAGAGGTCTCTGTGACT | + |
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Preference number: 2 (lower is better) Translates to: FGARRILQRPSPILSSEGPVRIP*PEVSVT Trigger: AGTCACAGAGACCTCTGGCCAGGGAATTCTAACTGG...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCATTGGCTGGCAATGCTaGCACTTTGGAGCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PRKSSRQDPGLEREKHRCIGWQC*HFGARR Trigger: TCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAAT...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTAGGATACCTTGTGGCTaGGACAATGGGAAACCAACC | + |
|
Preference number: 2 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFRIPCG*DNGKPT Trigger: GGTTGGTTTCCCATTGTCTCAGCCACAAGGTATCCT...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGCCAGAAAGAGACCAATaGCCCCCAGCAGGGGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RIASNGGKSGIWMLESRWPERDQ*PPAGEL Trigger: TAGCTCCCCTGCTGGGGGTCATTGGTCTCTTTCTGG...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAGTGACTGGCATCTTCTaGCACTGTCTTAAGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: EERRGEPLCALASPFVHSVTGIF*HCLKFK Trigger: TTTGAACTTAAGACAGTGGCAGAAGATGCCAGTCAC...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTAAGAAACCAGCAAAGTaGAGACTTTTATTACTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GLDEAPGVVTVARGGLRPKKPAK*RLLLLL Trigger: TAGCAGTAATAAAAGTCTGCACTTTGCTGGTTTCTT...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTGTTGCCAGATGTGACTaGCATCTTCTGCCACTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFVARCD*HLLPLS Trigger: AGACAGTGGCAGAAGATGCCAGTCACATCTGGCAAC...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGCTCTGTGACTGCCTCTaGACTCGGGACATGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RIASNGGKSGIWMLESRWLCDCL*TRDMQQ Trigger: CTGCTGCATGTCCCGAGTCCAGAGGCAGTCACAGAG...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CAA 90 bp | AGAAATAAATACAAGTGGAAGGTACCTGCCCTATTCCTAAAAGGATaGGCTGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RNKYKWKVPALFLKG*AGNAGTLEPGESSS Trigger: GCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCACTTGTATTTATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGGCAATGCTGGCACTTTaGAGCCAGGAGAATCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: RIASNGGKSGIWMLESRWAMLAL*SQENPP Trigger: TGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGC...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR TCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGAATGCCGGTAATTGGGTaGCTAAAGACCAAAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FGARRILQRPSPILSSEGMPVIG*LKTKEK Trigger: TTTTTCTTTGGTCTTTAGTCACCCAATTACCGGCAT...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| 3UTR-3UTR GCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTGTGACTGGCATCTTCTaGCACTGTCTTAAGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFVTGIF*HCLKFK Trigger: TTTGAACTTAAGACAGTGGCAGAAGATGCCAGTCAC...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAAAGAAACCAGCAAAGTaGAGACTTTTATTACTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: EERRGEPLCALASPFVHSKKPAK*RLLLLL Trigger: TAGCAGTAATAAAAGTCTGCACTTTGCTGGTTTCTT...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGGTTGCCAGATGTGACTaGCATCTTCTGCCACTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RIASNGGKSGIWMLESRWVARCD*HLLPLS Trigger: AGACAGTGGCAGAAGATGCCAGTCACATCTGGCAAC...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGGAAGATGCCGGTAATTaGGTGACTAAAGACCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RIASNGGKSGIWMLESRWEDAGN*VTKDQR Trigger: TCTTTGGTCTTTAGTCACCCAATTACCGGCATCTTC...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGAGAAATAAATACAAGTaGAAGGTACCTGCCCTATTC | + |
|
Preference number: 2 (lower is better) Translates to: RIASNGGKSGIWMLESRWRNKYK*KVPALF Trigger: GAATAGGGCAGGTACCTTCCACTTGTATTTATTTCT...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CAA 90 bp | GTGTTGTTGGCATCTCATCAATGCTTATTGAGAATAGCACAGGCATaGAAGTTTCTGGAGAACGTAGGAGAAATGTATTATCTCTACCAT | + |
|
Preference number: 2 (lower is better) Translates to: VLLASHQCLLRIAQA*KFLENVGEMYYLYH Trigger: ATGGTAGAGATAATACATTTCTCCTACGTTCTCCAGAAACTTCAATGCCTGTGCTATTCTCAATAAGCATTGATGAGATGCCAACAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | GGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTaGGGCAGCAGTGCTGGGCTTTCCCTCACTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGLRPWSGIPGG*GSSAGLSLTQP Trigger: TGGCTGAGTGAGGGAAAGCCCAGCACTGCTGCCCCACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR TCA 72 bp | AAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTaGGGCCTTGGAGCGGGATACCCGGAGGGTGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KPLVWLPLPEVG*GLGAGYPEGGA Trigger: TGCCCCACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | GGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTaGAGCGGGATACCCGGAGGGTGGGGCAGCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVVTVARGGLRP*SGIPGGWGSSA Trigger: AGCACTGCTGCCCCACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACCACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | TTCCCTGAAATAGTGCAGGTCCCGAGCAGAGCTGCCTaGGGGGCTGCAGTCCACCCCCAGGATCAAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FPEIVQVPSRAA*GAAVHPQDQVA Trigger: AGCCACTTGATCCTGGGGGTGGACTGCAGCCCCCCAGGCAGCTCTGCTCGGGACCTGCACTATTTCAGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR TCA 72 bp | CTGCCGGTGGAAGTGCTGGAAGAGCAGGGGCTTAGATaGAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPVEVLEEQGLR*SPWCGYRCQRW Trigger: CCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCCCCTGCTCTTCCAGCACTTCCACCGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR GCA 72 bp | CAGGATCAAGTGGCTCTGGGACTCTGCCGGTGGAAGTaGTGGAAGAGCAGGGGCTTAGATGAAGCCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QDQVALGLCRWK*WKSRGLDEAPG Trigger: ACCAGGGGCTTCATCTAAGCCCCTGCTCTTCCAGCACTTCCACCGGCAGAGTCCCAGAGCCACTTGATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | GATCAAGTGGCTCTGGGACTCTGCCGGTGGAAGTGCTaGAAGAGCAGGGGCTTAGATGAAGCCCCTGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DQVALGLCRWKC*KSRGLDEAPGV Trigger: CACACCAGGGGCTTCATCTAAGCCCCTGCTCTTCCAGCACTTCCACCGGCAGAGTCCCAGAGCCACTTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CAA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGGACTGGAGTCAGTCTaGAGACTCTTTAGCCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GLDEAPGVVTVARGGLRPGLESV*RLFSPR Trigger: TCTGGGGCTAAAGAGTCTCAAGACTGACTCCAGTCC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | GGAGGGGAGTCCAAGGATACCTTGTGGCTGAGACAATaGGAAACCAACCAGTGCCATGTCCCAAGAGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGESKDTLWLRQ*ETNQCHVPRDP Trigger: TGGGTCTCTTGGGACATGGCACTGGTTGGTTTCCCATTGTCTCAGCCACAAGGTATCCTTGGACTCCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | AGTTCTGAAGGAGTCAAGAGCCCAGTTAGAATTCCCTaGCCAGAGGTCTCTGTGACTGCCTCTGGACTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSEGVKSPVRIP*PEVSVTASGLG Trigger: CCCGAGTCCAGAGGCAGTCACAGAGACCTCTGGCCAGGGAATTCTAACTGGGCTCTTGACTCCTTCAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | ACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTaGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TCPIPKRIGWQC*HFGARRILQRP Trigger: GGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR TCA 72 bp | AGGGAAGAGGAGGGGAGTCCAAGGATACCTTGTGGCTaGGACAATGGGAAACCAACCAGTGCCATGTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: REEEGSPRIPCG*DNGKPTSAMSQ Trigger: TTGGGACATGGCACTGGTTGGTTTCCCATTGTCTCAGCCACAAGGTATCCTTGGACTCCCCTCCTCTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTGAGTCCAAGGATACCTaGTGGCTGAGACAATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ERRGEESLSVPWLPHLCIESKDT*WLRQWE Trigger: TTCCCATTGTCTCAGCCACAAGGTATCCTTGGACTC...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAGAGTCCAAGGATACCTaGTGGCTGAGACAATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EERRGEPLCALASPFVHSESKDT*WLRQWE Trigger: TTCCCATTGTCTCAGCCACAAGGTATCCTTGGACTC...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CCA 72 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTaGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VEGTCPIPKRIG*QCWHFGARRIL Trigger: GAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CAA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGAGACCCATTTGTCCAGTaGCCAGATGTGACTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: FGARRILQRPSPILSSEGDPFVQ*PDVTGI Trigger: GATGCCAGTCACATCTGGCAACTGGACAAATGGGTC...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCTATTCCTAAAAGGATaGGCTGGCAATGCTGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: ERRGEESLSVPWLPHLCILFLKG*AGNAGT Trigger: AGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAG...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTGGACTGGAGTCAGTCTaGAGACTCTTTAGCCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFGLESV*RLFSPR Trigger: TCTGGGGCTAAAGAGTCTCAAGACTGACTCCAGTCC...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR TCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGTTTGCCGGGCCATCATaGCGCGGCCATCACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVFAGPS*RGHHSR Trigger: TCTGCTGTGATGGCCGCGTCATGATGGCCCGGCAAA...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGTCACAGATGCTACAATaGGAGGCCCTGGGAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVSQMLQ*EALGGR Trigger: CCGGCCTCCCAGGGCCTCCCATTGTAGCATCTGTGA...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGGGATGCCTCCTGTGGTaGCTCTGGGGGTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEERRGEESLSVPWGCLLW*LWGFWR Trigger: CCTCCAGAACCCCCAGAGCCACCACAGGAGGCATCC...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGGAAGGTGTTCCTGCCTaGGAGTTTCTCCCATTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVEGVPA*EFLPFP Trigger: CGGAAATGGGAGAAACTCCCAGGCAGGAACACCTTC...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGCGGCAAACACAGGAATaGCAGGAGACAGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVRQTQE*QETAEQ Trigger: CTGTTCAGCTGTCTCCTGCCATTCCTGTGTTTGCCG...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGGGAGGCTGGGCTCTGTaGCAACAGGCTACTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEERRGEESLSVPWGGWAL*QQATAG Trigger: ACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCC...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGAGTTCATATGCTCTGTaGAGGCTGGGCTCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVSSYAL*RLGSVA Trigger: TGCCACAGAGCCCAGCCTCCACAGAGCATATGAACT...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGCTACTGCTGGTCTCTTaGGTACTTGGAGGTCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVLLLVS*VLGGRL Trigger: AAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAG...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTCTTAATACGAGGAGGTaGTCGCTGGCCCTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLDEAPGVVTVARGGLRPLNTRR*SLALWH Trigger: GTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAG...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCTTTGCCGGGCCATCATaGCGCGGCCATCACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPIFAGPS*RGHHSR Trigger: TCTGCTGTGATGGCCGCGTCATGATGGCCCGGCAAA...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGTCCACTTTCCTCCAGTaGCAAAATACCCCTTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVSTFLQ*QNTPSI Trigger: GATCGAAGGGGTATTTTGCCACTGGAGGAAAGTGGA...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCTTCGGATGCCTCCTGTaGTGGCTCTGGGGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPIFGCLL*WLWGFW Trigger: CCAGAACCCCCAGAGCCACCACAGGAGGCATCCGAA...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGCCACAAGGAATGTGTaGAATCCAGTCAGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLDEAPGVVTVARGGLRPATRNV*NPVSPT Trigger: TGTGGGGCTGACTGGATTTCACACATTCCTTGTGGC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGTCTTCATTGGTGGTCTaGTTGAGAGCCACAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GYRCQRWAEALERDTRRVSSLVV*LRATRN Trigger: ATTCCTTGTGGCTCTCAATCAGACCACCAATGAAGA...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGATGGTCGCTGGCCCTGTaGCACGGCACCATTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FGARRILQRPSPILSSEGWSLAL*HGTIGG Trigger: GCCACCAATGGTGCCGTGCCACAGGGCCAGCGACCA...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGTGGGGGTTCTGGAGGTaGCATCTCTTCAGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEERRGEESLSVPWWGFWR*HLFRNA Trigger: AGCATTCCTGAAGAGATGCCACCTCCAGAACCCCCA...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCACTTAATACGAGGAGGTaGTCGCTGGCCCTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEPLCALASPFVHSLNTRR*SLALWH Trigger: GTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAG...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGGCAACAGGCTACTGCTaGTCTCTTGAGTACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEERRGEESLSVPWATGYC*SLEYLE Trigger: CTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGC...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTCATTGGTGGTCTGATTaGGAGCCACAAGGAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLDEAPGVVTVARGGLRPHWWSD*EPQGMC Trigger: ACACATTCCTTGTGGCTCTCAATCAGACCACCAATG...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGAGTCATTCGATCCAGGACACTaGGGGGCAAGGGGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPGESSSVPLQSLVLKESFDPGH*GARGHK Trigger: TTTGTGGCCCCTTGCCCCCCAGTGTCCTGGATCGAA...TGACTCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGGTCTCTTGAGTACTTaGAGGTCGACTTCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLDEAPGVVTVARGGLRPGLLST*RSTSTF Trigger: GAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCAGTTCATATGCTCTGTaGAGGCTGGGCTCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPISSYAL*RLGSVA Trigger: TGCCACAGAGCCCAGCCTCCACAGAGCATATGAACT...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCGGATGCCTCCTGTGGTaGCTCTGGGGGTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRKSSRQDPGLEREKHRCGCLLW*LWGFWR Trigger: CCTCCAGAACCCCCAGAGCCACCACAGGAGGCATCC...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTACTGCTGGTCTCTTaGGTACTTGGAGGTCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPILLLVS*VLGGRL Trigger: AAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAG...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCACAGTTGTCACAGATaGTACAATGGGAGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERRGEESLSVPWLPHLCIHSCHR*YNGRPW Trigger: CCAGGGCCTCCCATTGTAGCATCTGTGACAACTGTG...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCACACAGTTGTCACAGATaGTACAATGGGAGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEPLCALASPFVHSHSCHR*YNGRPW Trigger: CCAGGGCCTCCCATTGTAGCATCTGTGACAACTGTG...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAGAAGGTGTTCCTGCCTaGGAGTTTCTCCCATTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEPLCALASPFVHSEGVPA*EFLPFP Trigger: CGGAAATGGGAGAAACTCCCAGGCAGGAACACCTTC...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGCACGGCACCATTGGTaGCTTCTATTTCCATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GLDEAPGVVTVARGGLRPARHHW*LLFPFL Trigger: TAGAAATGGAAATAGAAGCCACCAATGGTGCCGTGC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTTCACAGATGCTACAATaGGAGGCCCTGGGAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFSQMLQ*EALGGR Trigger: CCGGCCTCCCAGGGCCTCCCATTGTAGCATCTGTGA...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGATTCGATCCAGGACACTaGGGGGCAAGGGGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FGARRILQRPSPILSSEGFDPGH*GARGHK Trigger: TTTGTGGCCCCTTGCCCCCCAGTGTCCTGGATCGAA...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCGCAACAGGCTACTGCTaGTCTCTTGAGTACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPIATGYC*SLEYLE Trigger: CTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGC...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCGGAGGCTGGGCTCTGTaGCAACAGGCTACTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRKSSRQDPGLEREKHRCGGWAL*QQATAG Trigger: ACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCC...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTTGGGGGTTCTGGAGGTaGCATCTCTTCAGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERRGEESLSVPWLPHLCIWGFWR*HLFRNA Trigger: AGCATTCCTGAAGAGATGCCACCTCCAGAACCCCCA...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCCTTCTCAGCTTCGGATaGCTCCTGTGGTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRKSSRQDPGLEREKHRCLLSFG*LLWWLW Trigger: CCAGAGCCACCACAGGAGGCATCCGAAGCTGAGAAG...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTCTTCTCAGCTTCGGATaGCTCCTGTGGTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFLLSFG*LLWWLW Trigger: CCAGAGCCACCACAGGAGGCATCCGAAGCTGAGAAG...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTTGGCTCTGGGGGTTCTaGAGGTGGCATCTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFWLWGF*RWHLFR Trigger: CCTGAAGAGATGCCACCTCCAGAACCCCCAGAGCCA...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| 3UTR CAA 72 bp | GGGACATGCAGCAGCTGGAAAGGACTGGAGTCAGTCTaGAGACTCTTTAGCCCCAGAAAGAGACCAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: GTCSSWKGLESV*RLFSPRKRPMT Trigger: GGTCATTGGTCTCTTTCTGGGGCTAAAGAGTCTCAAGACTGACTCCAGTCCTTTCCAGCTGCTGCATGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CAA 72 bp | CTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTaGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLKGLAGNAGT*EPGESSSVPLQ Trigger: TTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCGAAGACATAAATTGTaGGGAGGGAGAGAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERRGEESLSVPWLPHLCIRRHKL*GGRERG Trigger: TCCTCTCTCTCTCCCTCCTCACAATTTATGTCTTCG...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCTCTTCATTGGTGGTCTaGTTGAGAGCCACAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPISSLVV*LRATRN Trigger: ATTCCTTGTGGCTCTCAATCAGACCACCAATGAAGA...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTGTCCATGATCCTTTaGTGTCTTCATTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPILSMIL*CLHWWS Trigger: AGACCACCAATGAAGACATCAAAGGATCATGGACAG...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGATTCTTCCCTGTCCATaGTCCTTTGATGTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEERRGEESLSVPWILPCP*SFDVFI Trigger: AATGAAGACATCAAAGGATCATGGACAGGGAAGAAT...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGATGAAGCCCCTGGTGTGGTTACCGTTGCCAGAGGTGGGCTGAGGCCTGAGGCCGGAAGATCTTaGATGTATAACAGTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLDEAPGVVTVARGGLRPEAGRS*MYNSIS Trigger: TGAAATACTGTTATACATGCAAGATCTTCCGGCCTC...AGGCCTCAGCCCACCTCTGGCAACGGTAACCACACCAGGGGCTTCATCTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | TGGCAATGCTGGCACTTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCAGTTCTTCACAATGTTaGCGTGGCTGTACGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: WQCWHFGARRILQRPSPISSSQC*RGCTDS Trigger: AGAATCCGTACAGCCACGGCAACATTGTGAAGAACT...GATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAAGTGCCAGCATTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCAGGTCTCTTGAGTACTTaGAGGTCGACTTCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEPLCALASPFVHSGLLST*RSTSTF Trigger: GAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACC...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCATCTCTTCAGGAATGCTaGTGTCCTCTGCCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EERRGEPLCALASPFVHSSLQEC*CPLPSH Trigger: ATGAGATGGCAGAGGACACCAGCATTCCTGAAGAGA...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCTGTCCATGATCCTTTaGTGTCTTCATTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERRGEESLSVPWLPHLCILSMIL*CLHWWS Trigger: AGACCACCAATGAAGACATCAAAGGATCATGGACAG...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGATGGCTGTACGGATTCTaGACACGATTCTTCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FGARRILQRPSPILSSEGWLYGF*TRFFPV Trigger: GACAGGGAAGAATCGTGTGCAGAATCCGTACAGCCA...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGAGTGGCAACAGGCTACTaGTGGTCTCTTGAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGARRILQRPSPILSSEGVATGY*WSLEYL Trigger: CAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCAC...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR CCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCCGGCAAACACAGGAATaGCAGGAGACAGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PRKSSRQDPGLEREKHRCRQTQE*QETAEQ Trigger: CTGTTCAGCTGTCTCCTGCCATTCCTGTGTTTGCCG...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| 3UTR CAA 72 bp | TACAAGTGGAAGGTACCTGCCCTATTCCTAAAAGGATaGGCTGGCAATGCTGGCACTTTGGAGCCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKWKVPALFLKG*AGNAGTLEPGE Trigger: TTCTCCTGGCTCCAAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCACTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTATTCTTCCCTGTCCATaGTCCTTTGATGTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ERRGEESLSVPWLPHLCIILPCP*SFDVFI Trigger: AATGAAGACATCAAAGGATCATGGACAGGGAAGAAT...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGACAATTTTCAAGGATTTaGGGGCCACATAGACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FGARRILQRPSPILSSEGQFSRI*GPHRRC Trigger: ACATCGTCTATGTGGCCCTCAAATCCTTGAAAATTG...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR TCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGGCCACAAGGAATGTGTaGAATCCAGTCAGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RIASNGGKSGIWMLESRWATRNV*NPVSPT Trigger: TGTGGGGCTGACTGGATTTCACACATTCCTTGTGGC...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTAGTTCTTCACAATGTTaGCGTGGCTGTACGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFSSSQC*RGCTDS Trigger: AGAATCCGTACAGCCACGGCAACATTGTGAAGAACT...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
||
| CDS-3UTR GCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGGTGGCAACAGGCTACTaGTGGTCTCTTGAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIASNGGKSGIWMLESRWVATGY*WSLEYL Trigger: CAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCAC...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR GCA 90 bp | GTGGAAGGTACCTGCCCTATTCCTAAAAGGATTGGCTGGCAATGCTGGCACTTTGAGGCCGGAAGATCTTaGATGTATAACAGTATTTCA | + |
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Preference number: 4 (lower is better) Translates to: VEGTCPIPKRIGWQCWHFEAGRS*MYNSIS Trigger: TGAAATACTGTTATACATGCAAGATCTTCCGGCCTC...AAAGTGCCAGCATTGCCAGCCAATCCTTTTAGGAATAGGGCAGGTACCTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGTCCACTTTCCTCCAGTaGCAAAATACCCCTTCGATC | + |
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Preference number: 4 (lower is better) Translates to: RIASNGGKSGIWMLESRWSTFLQ*QNTPSI Trigger: GATCGAAGGGGTATTTTGCCACTGGAGGAAAGTGGA...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR TCA 90 bp | CCCCGTAAGTCATCCAGACAAGACCCTGGCTTAGAAAGAGAAAAACACAGGTGCCTATTTCCATTTCTATaGAAGCTGCTTCATCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: PRKSSRQDPGLEREKHRCLFPFL*KLLHLV Trigger: TACCAGATGAAGCAGCTTTCATAGAAATGGAAATAG...GCACCTGTGTTTTTCTCTTTCTAAGCCAGGGTCTTGTCTGGATGACTTACGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR TCA 90 bp | CGTATAGCATCTAATGGGGGAAAGAGTGGGATTTGGATGTTAGAGAGTAGATGGCTATTTCCATTTCTATaGAAGCTGCTTCATCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: RIASNGGKSGIWMLESRWLFPFL*KLLHLV Trigger: TACCAGATGAAGCAGCTTTCATAGAAATGGAAATAG...CCATCTACTCTCTAACATCCAAATCCCACTCTTTCCCCCATTAGATGCTATACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| 3UTR CAA 72 bp | GCATCTCATCAATGCTTATTGAGAATAGCACAGGCATaGAAGTTTCTGGAGAACGTAGGAGAAATGTATTAT | + |
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Preference number: 4 (lower is better) Translates to: ASHQCLLRIAQA*KFLENVGEMYY Trigger: ATAATACATTTCTCCTACGTTCTCCAGAAACTTCAATGCCTGTGCTATTCTCAATAAGCATTGATGAGATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CAA 90 bp | GGTTACCGTTGCCAGAGGTGGGCTGAGGCCTTGGAGCGGGATACCCGGAGGGTGTGGTCTCTTGAGTACTaGGAGGTCGACTTCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: GYRCQRWAEALERDTRRVWSLEY*EVDFHF Trigger: AAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCA...CACCCTCCGGGTATCCCGCTCCAAGGCCTCAGCCCACCTCTGGCAACGGTAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 90 bp | GGCTGGGCTCTGTGGCAACAGGCTACTGCTGGTCTCTTGAGTACTTaGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAATACCCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: GWALWQQATAGLLST*RSTSTFLQWQNTPS Trigger: CGAAGGGGTATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CAA 90 bp | GAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGTGGTCTCTTGAGTACTaGGAGGTCGACTTCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: EERRGEERRGEESLSVPWWSLEY*EVDFHF Trigger: AAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCA...CCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 90 bp | GGGGCAAGGGGCCACAAAGCACTTCACAGCAGTTCTTCACAATGTTaGCGTGGCTGTACGGATTCTGCACACGATTCTTCCCTGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: GARGHKALHSSSSQC*RGCTDSAHDSSLSM Trigger: CATGGACAGGGAAGAATCGTGTGCAGAATCCGTACAGCCACGGCAACATTGTGAAGAACTGCTGTGAAGTGCTTTGTGGCCCCTTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 90 bp | TGGGGGTTCTGGAGGTGGCATCTCTTCAGGAATGCTGGTGTCCTCTaGCATCTCATTAGAGTTCATATGCTCTGTGGAGGCTGGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: WGFWRWHLFRNAGVL*HLIRVHMLCGGWAL Trigger: CAGAGCCCAGCCTCCACAGAGCATATGAACTCTAATGAGATGGCAGAGGACACCAGCATTCCTGAAGAGATGCCACCTCCAGAACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 90 bp | TCATATGCTCTGTGGAGGCTGGGCTCTGTGGCAACAGGCTACTGCTaGTCTCTTGAGTACTTGGAGGTCGACTTCCACTTTCCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SYALWRLGSVATGYC*SLEYLEVDFHFPPV Trigger: CACTGGAGGAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAGAGCATATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CAA 90 bp | GAGAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTGCTACTGCTGGTCTCTaGAGTACTTGGAGGTCGACT | + |
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Preference number: 5 (lower is better) Translates to: ERRGEESLSVPWLPHLCIATAGL*STWRST Trigger: AGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGC...AATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS TCA 90 bp | TCTGTGGAGGCTGGGCTCTGTGGCAACAGGCTACTGCTGGTCTCTTaGGTACTTGGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAATA | + |
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Preference number: 5 (lower is better) Translates to: SVEAGLCGNRLLLVS*VLGGRLPLSSSGKI Trigger: TATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 90 bp | AGTTCATATGCTCTGTGGAGGCTGGGCTCTGTGGCAACAGGCTACTaGTGGTCTCTTGAGTACTTGGAGGTCGACTTCCACTTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SSYALWRLGSVATGY*WSLEYLEVDFHFPP Trigger: TGGAGGAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAGAGCATATGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CAA 90 bp | GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGCTTCCCCATTTGTGCATTCACAGTTCTTCACAATGTaGCCGTGGCTGTACGGATTC | + |
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Preference number: 5 (lower is better) Translates to: EERRGEPLCALASPFVHSQFFTM*PWLYGF Trigger: GAATCCGTACAGCCACGGCAACATTGTGAAGAACTG...TGAATGCACAAATGGGGAAGCCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 90 bp | TGCCATCTCATTAGAGTTCATATGCTCTGTGGAGGCTGGGCTCTGTaGCAACAGGCTACTGCTGGTCTCTTGAGTACTTGGAGGTCGACT | + |
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Preference number: 5 (lower is better) Translates to: CHLIRVHMLCGGWAL*QQATAGLLSTWRST Trigger: AGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAGAGCATATGAACTCTAATGAGATGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS-3UTR CAA 90 bp | TTTGGAGCCAGGAGAATCCTCCAGCGTCCCTCTCCAATCCTTAGTTCTGAAGGACAGTTCTTCACAATGTaGCCGTGGCTGTACGGATTC | + |
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Preference number: 5 (lower is better) Translates to: FGARRILQRPSPILSSEGQFFTM*PWLYGF Trigger: GAATCCGTACAGCCACGGCAACATTGTGAAGAACTG...TCCTTCAGAACTAAGGATTGGAGAGGGACGCTGGAGGATTCTCCTGGCTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 90 bp | GTTTATCTGGAAATTCTTAATACGAGGAGGTGGTCGCTGGCCCTGTaGCACGGCACCATTGGTGGCTTCTATTTCCATTTCTATGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: VYLEILNTRRWSLAL*HGTIGGFYFHFYES Trigger: GCTTTCATAGAAATGGAAATAGAAGCCACCAATGGTGCCGTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAGAATTTCCAGATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 90 bp | ATCTGGTTGTTTATCTGGAAATTCTTAATACGAGGAGGTGGTCGCTaGCCCTGTGGCACGGCACCATTGGTGGCTTCTATTTCCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: IWLFIWKFLIRGGGR*PCGTAPLVASISIS Trigger: AGAAATGGAAATAGAAGCCACCAATGGTGCCGTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAGAATTTCCAGATAAACAACCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 90 bp | TTTCACAATCTGGTTGTTTATCTGGAAATTCTTAATACGAGGAGGTaGTCGCTGGCCCTGTGGCACGGCACCATTGGTGGCTTCTATTTC | + |
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Preference number: 5 (lower is better) Translates to: FHNLVVYLEILNTRR*SLALWHGTIGGFYF Trigger: GAAATAGAAGCCACCAATGGTGCCGTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAGAATTTCCAGATAAACAACCAGATTGTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 90 bp | ACTTCACAGCAGTTCTTCACAATGTTGCCGTGGCTGTACGGATTCTaGACACGATTCTTCCCTGTCCATGATCCTTTGATGTCTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: TSQQFFTMLPWLYGF*TRFFPVHDPLMSSL Trigger: CAATGAAGACATCAAAGGATCATGGACAGGGAAGAATCGTGTGCAGAATCCGTACAGCCACGGCAACATTGTGAAGAACTGCTGTGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 72 bp | GCTCTGTGGAGGCTGGGCTCTGTGGCAACAGGCTACTaGTGGTCTCTTGAGTACTTGGAGGTCGACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: ALWRLGSVATGY*WSLEYLEVDFH Trigger: GTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 72 bp | CTGTGGAGGCTGGGCTCTGTGGCAACAGGCTACTGCTaGTCTCTTGAGTACTTGGAGGTCGACTTCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: LWRLGSVATGYC*SLEYLEVDFHF Trigger: AAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CAA 90 bp | GGGGGCAAGGGGCCACAAAGCACTTCACAGCAGTTCTTCACAATGTaGCCGTGGCTGTACGGATTCTGCACACGATTCTTCCCTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GGKGPQSTSQQFFTM*PWLYGFCTRFFPVH Trigger: ATGGACAGGGAAGAATCGTGTGCAGAATCCGTACAGCCACGGCAACATTGTGAAGAACTGCTGTGAAGTGCTTTGTGGCCCCTTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CAA 90 bp | AGGCTGGGCTCTGTGGCAACAGGCTACTGCTGGTCTCTTGAGTACTaGGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAATACCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RLGSVATGYCWSLEY*EVDFHFPPVAKYPF Trigger: GAAGGGGTATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CAA 90 bp | CTCTGTGGAGGCTGGGCTCTGTGGCAACAGGCTACTGCTGGTCTCTaGAGTACTTGGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LCGGWALWQQATAGL*STWRSTSTFLQWQN Trigger: ATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 72 bp | CTGGTTGTTTATCTGGAAATTCTTAATACGAGGAGGTaGTCGCTGGCCCTGTGGCACGGCACCATTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LVVYLEILNTRR*SLALWHGTIGG Trigger: GCCACCAATGGTGCCGTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAGAATTTCCAGATAAACAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS TCA 72 bp | CATCTGGTAGTGCTCGAGGAATCACTCCAGGGTCACTaGAACTTGTCCTCAACAGCGTGGCCATGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: HLVVLEESLQGH*NLSSTAWPWRK Trigger: TTTTCTCCATGGCCACGCTGTTGAGGACAAGTTTCAGTGACCCTGGAGTGATTCCTCGAGCACTACCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 72 bp | GGCCACAAAGCACTTCACAGCAGTTCTTCACAATGTTaGCGTGGCTGTACGGATTCTGCACACGATTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GHKALHSSSSQC*RGCTDSAHDSS Trigger: GGAAGAATCGTGTGCAGAATCCGTACAGCCACGGCAACATTGTGAAGAACTGCTGTGAAGTGCTTTGTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 72 bp | TGGAGGTGGCATCTCTTCAGGAATGCTGGTGTCCTCTaGCATCTCATTAGAGTTCATATGCTCTGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: WRWHLFRNAGVL*HLIRVHMLCGG Trigger: GCCTCCACAGAGCATATGAACTCTAATGAGATGGCAGAGGACACCAGCATTCCTGAAGAGATGCCACCTCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 72 bp | GAAATTCTTAATACGAGGAGGTGGTCGCTGGCCCTGTaGCACGGCACCATTGGTGGCTTCTATTTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: EILNTRRWSLAL*HGTIGGFYFHF Trigger: GAAATGGAAATAGAAGCCACCAATGGTGCCGTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAGAATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 72 bp | CTGTGGCAACAGGCTACTGCTGGTCTCTTGAGTACTTaGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LWQQATAGLLST*RSTSTFLQWQN Trigger: ATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 72 bp | ATTAGAGTTCATATGCTCTGTGGAGGCTGGGCTCTGTaGCAACAGGCTACTGCTGGTCTCTTGAGTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: IRVHMLCGGWAL*QQATAGLLSTW Trigger: CCAAGTACTCAAGAGACCAGCAGTAGCCTGTTGCCACAGAGCCCAGCCTCCACAGAGCATATGAACTCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS CCA 72 bp | TTTATCTGGAAATTCTTAATACGAGGAGGTGGTCGCTaGCCCTGTGGCACGGCACCATTGGTGGCTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: FIWKFLIRGGGR*PCGTAPLVASI Trigger: AATAGAAGCCACCAATGGTGCCGTGCCACAGGGCCAGCGACCACCTCCTCGTATTAAGAATTTCCAGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS GCA 72 bp | CAGTTCTTCACAATGTTGCCGTGGCTGTACGGATTCTaGACACGATTCTTCCCTGTCCATGATCCTTTGATG | + |
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Preference number: 6 (lower is better) Translates to: QFFTMLPWLYGF*TRFFPVHDPLM Trigger: CATCAAAGGATCATGGACAGGGAAGAATCGTGTGCAGAATCCGTACAGCCACGGCAACATTGTGAAGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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| CDS TCA 72 bp | GCTGTACGGATTCTGCACACGATTCTTCCCTGTCCATaGTCCTTTGATGTCTTCATTGGTGGTCTGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: AVRILHTILPCP*SFDVFIGGLIE Trigger: CTCAATCAGACCACCAATGAAGACATCAAAGGATCATGGACAGGGAAGAATCGTGTGCAGAATCCGTACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037960.11 ENSMUST00000088935.4 |
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