RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024982

Ensembl transcript IDs: ENSMUST00000076891.7, ENSMUST00000223807.2, ENSMUST00000224291.2, ENSMUST00000224897.2, ENSMUST00000225495.2, ENSMUST00000225963.2, ENSMUST00000226103.2

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATTCCTCTCACAGTACCCATGTCCAGAAGGGAATAGCACTGTCATaGAAGCTGCTGGCCAGGCCCCGCATGCACAGCACCATGCAGTCA +
Preference number: 1 (lower is better)
Translates to: HSSHSTHVQKGIALS*KLLARPRMHSTMQS
Trigger: TGACTGCATGGTGCTGTGCATGCGGGGCCTGGCCAGCAGCTTCCATGACAGTGCTATTCCCTTCTGGACATGGGTACTGTGAGAGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 90 bp GACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTaGTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGAAGTGGA +
Preference number: 1 (lower is better)
Translates to: DLQGKSDVQHTERAS*SLGWNGLASVGRSG
Trigger: TCCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR GCA 90 bp CGCAGCCAATCCGAAGGGAACAATTGGAGGTGGATCTCTCCTGGCTaGACTCATGTCAATCTTGACTGTGTTCCACCCAAAGGAGAGCCG +
Preference number: 1 (lower is better)
Translates to: RSQSEGNNWRWISPG*THVNLDCVPPKGEP
Trigger: CGGCTCTCCTTTGGGTGGAACACAGTCAAGATTGACATGAGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCCTTCGGATTGGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 90 bp CTTTTTCTCGACAGACACGCCTGCCAGAAGACATGTGGCTCACAATaGAGTGGCAGAGCTAGCCTCTCCCTTAGGAACTCTGGGTACCCA +
Preference number: 1 (lower is better)
Translates to: LFLDRHACQKTCGSQ*SGRASLSLRNSGYP
Trigger: TGGGTACCCAGAGTTCCTAAGGGAGAGGCTAGCTCTGCCACTGCATTGTGAGCCACATGTCTTCTGGCAGGCGTGTCTGTCGAGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR TCA 90 bp TTGAGCATGGAAGAAGGGGCTCATGGTGCTGTGCTCTGCCTTCCCTaGGGGAACTATCAACTATTGGAAGCTGCTGTGTGCGCGGGAATT +
Preference number: 1 (lower is better)
Translates to: LSMEEGAHGAVLCLP*GNYQLLEAAVCAGI
Trigger: AATTCCCGCGCACACAGCAGCTTCCAATAGTTGATAGTTCCCTCAGGGAAGGCAGAGCACAGCACCATGAGCCCCTTCTTCCATGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR TCA 90 bp TTTTGTCTCCATACAACCAGTATCGCAGCCCTCTCGTTGCTAAGATaGACTCTCCTTTCTGCAGCCGGATCCGAGGCTCCTCAGTGCAGG +
Preference number: 1 (lower is better)
Translates to: FCLHTTSIAALSLLR*TLLSAAGSEAPQCR
Trigger: CCTGCACTGAGGAGCCTCGGATCCGGCTGCAGAAAGGAGAGTTCATCTTAGCAACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 90 bp GCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTaGTTCAGTAGGAAGAAGTGGAAAGACGGCAGGAATTCAAAGGCA +
Preference number: 1 (lower is better)
Translates to: AAHRKGKLLTGLERP*FSRKKWKDGRNSKA
Trigger: TGCCTTTGAATTCCTGCCGTCTTTCCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR GCA 90 bp TGGGTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTaGTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCT +
Preference number: 1 (lower is better)
Translates to: WVGFLELWSEACTFL*SMNLLGRACPLLLP
Trigger: AGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CCA 90 bp CAAGGTGGCGGCAAACGCAGCCAATCCGAAGGGAACAATTGGAGGTaGATCTCTCCTGGCTGCACTCATGTCAATCTTGACTGTGTTCCA +
Preference number: 1 (lower is better)
Translates to: QGGGKRSQSEGNNWR*ISPGCTHVNLDCVP
Trigger: TGGAACACAGTCAAGATTGACATGAGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCCTTCGGATTGGCTGCGTTTGCCGCCACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 90 bp GGCAAACAAGGTGGCGGCAAACGCAGCCAATCCGAAGGGAACAATTaGAGGTGGATCTCTCCTGGCTGCACTCATGTCAATCTTGACTGT +
Preference number: 1 (lower is better)
Translates to: GKQGGGKRSQSEGNN*RWISPGCTHVNLDC
Trigger: ACAGTCAAGATTGACATGAGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCCTTCGGATTGGCTGCGTTTGCCGCCACCTTGTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 90 bp CTGAACTGGTTTCCTTGTTGCCCTCACCTGCTCTCCAGTCTTTACTaGACAGTGATCCTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCC +
Preference number: 1 (lower is better)
Translates to: LNWFPCCPHLLSSLY*TVILLECRALKAFP
Trigger: GGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTGAGGGCAACAAGGAAACCAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CCA 90 bp CAGGTGTGCACCACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTaGACTCTGGTCCTCTTGCACAGCAGATGCTTACCCACTGAGCCA +
Preference number: 1 (lower is better)
Translates to: QVCTTASGFICVLSV*TLVLLHSRCLPTEP
Trigger: TGGCTCAGTGGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGTGCACACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR CCA 90 bp CTGAGGAAGAAACAGAGTAACCACATGCAAGATGCTCCTGTCCAGTaGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGA +
Preference number: 1 (lower is better)
Translates to: LRKKQSNHMQDAPVQ*GIRPAGEVRCAAHR
Trigger: TCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTGCATGTGGTTACTCTGTTTCTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR TCA 90 bp GGAAACATGGCAGCATCGAGGCAGACATGGTGCTGGAGAAGGAGCTaGGAGTTCTACATCTTGATCTTAAGCAGAGTAGGCTCGTTGCAT +
Preference number: 1 (lower is better)
Translates to: GNMAASRQTWCWRRS*EFYILILSRVGSLH
Trigger: ATGCAACGAGCCTACTCTGCTTAAGATCAAGATGTAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTCGATGCTGCCATGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR TCA 90 bp CTCTCAGGTTCTGATCCTGGTACTCCATCTTACGAGAGGCCAAACTaGGCTCTTCACAGAAGAGAGTTGGGATTACAGGTGTGCACCACT +
Preference number: 1 (lower is better)
Translates to: LSGSDPGTPSYERPN*ALHRRELGLQVCTT
Trigger: AGTGGTGCACACCTGTAATCCCAACTCTCTTCTGTGAAGAGCTCAGTTTGGCCTCTCGTAAGATGGAGTACCAGGATCAGAACCTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR CCA 90 bp AAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGAAGTaGAAAGACGGCAGGAATTCAAAGGCATATGCAGAATGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: KLLTGLERPCFSRKK*KDGRNSKAYAEWLL
Trigger: CAGAAGCCATTCTGCATATGCCTTTGAATTCCTGCCGTCTTTCCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR CCA 90 bp AGGGAGTTTCAGAGGTTTAGTCCATTATCATCATGGTGGGAAACATaGCAGCATCGAGGCAGACATGGTGCTGGAGAAGGAGCTGAGAGT +
Preference number: 1 (lower is better)
Translates to: REFQRFSPLSSWWET*QHRGRHGAGEGAES
Trigger: ACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGATGATAATGGACTAAACCTCTGAAACTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CCA 90 bp CTCATGGTGCTGTGCTCTGCCTTCCCTGAGGGAACTATCAACTATTaGAAGCTGCTGTGTGCGCGGGAATTCAGGATATTGAGTGATGTA +
Preference number: 1 (lower is better)
Translates to: LMVLCSAFPEGTINY*KLLCAREFRILSDV
Trigger: TACATCACTCAATATCCTGAATTCCCGCGCACACAGCAGCTTCCAATAGTTGATAGTTCCCTCAGGGAAGGCAGAGCACAGCACCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR TCA 90 bp TGCAGTGGCAGAGCTAGCCTCTCCCTTAGGAACTCTGGGTACCCATaGAGAATTGCAGCTTTTCAGTTCATATGTCATACCTCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: CSGRASLSLRNSGYP*RIAAFQFICHTSVS
Trigger: GGAGACAGAGGTATGACATATGAACTGAAAAGCTGCAATTCTTCATGGGTACCCAGAGTTCCTAAGGGAGAGGCTAGCTCTGCCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 90 bp ATGGCGTTGAGAATCACAAACTATCTGCCTTCTAAAGAGTCCATTTaGACTCACCTTCCGCATTTGTCCCCTGCTCTGCAAAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: MALRITNYLPSKESI*THLPHLSPALQSSS
Trigger: GCTGCTGCTTTGCAGAGCAGGGGACAAATGCGGAAGGTGAGTGCAAATGGACTCTTTAGAAGGCAGATAGTTTGTGATTCTCAACGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CCA 90 bp AATATTGATTGTAGTGCCATCACGGTAGCTAAGGGACCAGAGGTGTaGAGCCAACCTAGGTGTCTTCCCTTGGCTCATATGTTTGAGAGG +
Preference number: 1 (lower is better)
Translates to: NIDCSAITVAKGPEV*SQPRCLPLAHMFER
Trigger: CCTCTCAAACATATGAGCCAAGGGAAGACACCTAGGTTGGCTCCACACCTCTGGTCCCTTAGCTACCGTGATGGCACTACAATCAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR TCA 90 bp GAACAATTGGAGGTGGATCTCTCCTGGCTGCACTCATGTCAATCTTaGCTGTGTTCCACCCAAAGGAGAGCCGATTATAAAGCTGTGTGT +
Preference number: 1 (lower is better)
Translates to: EQLEVDLSWLHSCQS*LCSTQRRADYKAVC
Trigger: ACACACAGCTTTATAATCGGCTCTCCTTTGGGTGGAACACAGTCAAGATTGACATGAGTGCAGCCAGGAGAGATCCACCTCCAATTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 90 bp TTGACATTCTTCAGGGAGTTTCAGAGGTTTAGTCCATTATCATCATaGTGGGAAACATGGCAGCATCGAGGCAGACATGGTGCTGGAGAA +
Preference number: 1 (lower is better)
Translates to: LTFFREFQRFSPLSS*WETWQHRGRHGAGE
Trigger: TTCTCCAGCACCATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGATGATAATGGACTAAACCTCTGAAACTCCCTGAAGAATGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CCA 90 bp CCAAGCTGTAGTGTATGTGCTTGTAAGTCAACCAAGTTGGACAGCTaGGCACGCGATTCCACCCATTTTACAGTAGAGGAAAAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: PSCSVCACKSTKLDS*ARDSTHFTVEEKEE
Trigger: TTCTTCCTTTTCCTCTACTGTAAAATGGGTGGAATCGCGTGCCCAGCTGTCCAACTTGGTTGACTTACAAGCACATACACTACAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR TCA 90 bp TTTATTCAAAACTCAGGGAAGAAGGACATCCTTTCTCTCAGGTTCTaGTCCTGGTACTCCATCTTACGAGAGGCCAAACTGAGCTCTTCA +
Preference number: 1 (lower is better)
Translates to: FIQNSGKKDILSLRF*SWYSILREAKLSSS
Trigger: TGAAGAGCTCAGTTTGGCCTCTCGTAAGATGGAGTACCAGGATCAGAACCTGAGAGAAAGGATGTCCTTCTTCCCTGAGTTTTGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR GCA 90 bp AGCTATTATTATCAAAACCTGATAAGTAAGAGCTGCAGAGAGATATaGAAGAAGCATCCTTGTATGTCTACACAGTTCCCTAATACATTT +
Preference number: 1 (lower is better)
Translates to: SYYYQNLISKSCREI*KKHPCMSTQFPNTF
Trigger: AAATGTATTAGGGAACTGTGTAGACATACAAGGATGCTTCTTGCATATCTCTCTGCAGCTCTTACTTATCAGGTTTTGATAATAATAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp CTGCACTGGGAAGGGACATGCAGACTTCAACTGTGCCCCTTATGGGGCCTGAGGTGTCATGGAAGCTGCTaGCCAGGCCCCGCATGCACA +
Preference number: 2 (lower is better)
Translates to: LHWEGTCRLQLCPLWGLRCHGSC*PGPACT
Trigger: TGTGCATGCGGGGCCTGGCCAGCAGCTTCCATGACA...CCTCAGGCCCCATAAGGGGCACAGTTGAAGTCTGCATGTCCCTTCCCAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR TCA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTGCCCCTTATGGGGCCTaGGGCAGCAGCACTGGGTTC +
Preference number: 2 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPAPYGA*GSSTGF
Trigger: GAACCCAGTGCTGCTGCCTCAGGCCCCATAAGGGGC...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR TCA 90 bp GTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATGCCCCTTATGGGGCCTaGGGCAGCAGCACTGGGTTC +
Preference number: 2 (lower is better)
Translates to: VGFLELWSEACTFLCSMNAPYGA*GSSTGF
Trigger: GAACCCAGTGCTGCTGCCTCAGGCCCCATAAGGGGC...ATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp CTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGGGCAAGTTGCTCACTaGGCTGGAACGGCCTTGCTT +
Preference number: 2 (lower is better)
Translates to: LLSSGELDLQGKSDVQHTGQVAH*AGTALL
Trigger: AAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCC...TGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CCA 90 bp TGGGAAGGGACATGCAGACTTCAACTGTGCCCCTTATGGGGCCTGAGGCAGCAGGGTGCTCATCTGCACTaGGAAGGGACATGCAGACTT +
Preference number: 2 (lower is better)
Translates to: WEGTCRLQLCPLWGLRQQGAHLH*EGTCRL
Trigger: AAGTCTGCATGTCCCTTCCCAGTGCAGATGAGCACC...CTGCTGCCTCAGGCCCCATAAGGGGCACAGTTGAAGTCTGCATGTCCCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CAA 90 bp AGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTaGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGAAGTGG +
Preference number: 2 (lower is better)
Translates to: RPAGEVRCAAHRKGK*LTGLERPCFSRKKW
Trigger: CCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR TCA 90 bp TCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTGCTCAAGATGAAAGCAGCATaGGTGCAGCCCAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: SMNLLGRACPLLLPLPLLKMKAA*VQPRGA
Trigger: GGCCCCTCTGGGCTGCACTCATGCTGCTTTCATCTT...GAGCAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR GCA 90 bp CTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGGGCTGGAACGGCCTTaGTTCAGTAGGAAGAAGTGG +
Preference number: 2 (lower is better)
Translates to: LLSSGELDLQGKSDVQHTGLERP*FSRKKW
Trigger: CCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCC...TGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR GCA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTGACGAGCGTGTCCTTTaGTGCTTCCTCTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPDERVL*CFLSLC
Trigger: GCAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTC...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CAA 90 bp GTAGCTAAGGGACCAGAGGTGTGGAGCCAACCTAGGTGTCTTCCCTaGGCTCATATGTTTGAGAGGCTTGTCCAGGTGAGTGTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: VAKGPEVWSQPRCLP*AHMFERLVQVSVLR
Trigger: ACGCAGGACACTCACCTGGACAAGCCTCTCAAACATATGAGCCAAGGGAAGACACCTAGGTTGGCTCCACACCTCTGGTCCCTTAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR-3UTR GCA 90 bp TGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGGGGCTGGAACGGCCTTaGTTCAGTAGGAAGAAGTGG +
Preference number: 2 (lower is better)
Translates to: WGIRPAGEVRCAAHRKGKGLERP*FSRKKW
Trigger: CCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCC...CTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR GCA 90 bp TTTCTCGACAGACACGCCTGCCAGAAGACATGTGGCTCACAATGCAGTGGCAGAAGACAGCAGTGCTGGTaGTCATCTGCACTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: FLDRHACQKTCGSQCSGRRQQCW*SSALGR
Trigger: CCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCT...TCTGCCACTGCATTGTGAGCCACATGTCTTCTGGCAGGCGTGTCTGTCGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR GCA 90 bp GTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTAGACAGCAGTGCTGGTaGTCATCTGCACTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VLYESVGTSVSFAASSPSRQQCW*SSALGR
Trigger: CCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCT...AGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCCAAGGCAAACAAGGTaGCGGCAAACGCAGCCAATC +
Preference number: 2 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPPRQTR*RQTQPI
Trigger: GATTGGCTGCGTTTGCCGCCACCTTGTTTGCCTTGG...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR GCA 90 bp CACCTGCTCTCCAGTCTTTACTGGACAGTGATCCTTCTAGAATGCAGGGCTCTGCACTGGGAAGGGACATaGAGACTTCAACTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: HLLSSLYWTVILLECRALHWEGT*RLQLCP
Trigger: GGGGCACAGTTGAAGTCTGCATGTCCCTTCCCAGTG...CAGAGCCCTGCATTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp CTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCATACAACTGTGCCCCTTATaGGGCCTGAGGCAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LLECRALKAFPTILATSIQLCPL*GLRQQH
Trigger: GTGCTGCTGCCTCAGGCCCCATAAGGGGCACAGTTG...TATGGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp AATGTTTCCATCAAGGTTCTGAACTGGTTTCCTTGTTGCCCTCACCTGCTCTCCCAACTGTGCCCCTTATaGGGCCTGAGGCAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: NVSIKVLNWFPCCPHLLSQLCPL*GLRQQH
Trigger: GTGCTGCTGCCTCAGGCCCCATAAGGGGCACAGTTG...GGAGAGCAGGTGAGGGCAACAAGGAAACCAGTTCAGAACCTTGATGGAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTACAGCCCTCTCGTATTaGCCACTCAAGTCCATCTCC +
Preference number: 2 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPTALSY*PLKSIS
Trigger: GGAGATGGACTTGAGTGGCCAATACGAGAGGGCTGT...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR TCA 90 bp AGTCACTGGCAATTACCTACAAACCACTGGATTATTCTTCCCTCTCTCTCCTGTGGAAGGTTCGCCTCATaGTCACTGGAGCCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SHWQLPTNHWIILPSLSCGRFAS*SLEPPP
Trigger: TGGGGGCGGCTCCAGTGATCATGAGGCGAACCTTCC...ACAGGAGAGAGAGGGAAGAATAATCCAGTGGTTTGTAGGTAATTGCCAGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR-3UTR TCA 90 bp AGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCGGTAATAAACATTTCTaGAGTCATGGCACTAGGGCA +
Preference number: 2 (lower is better)
Translates to: RCAAHRKGKLLTGLERPCGNKHF*SHGTRA
Trigger: TGCCCTAGTGCCATGACTTCAGAAATGTTTATTACC...GCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR TCA 90 bp CCTGACCTTAGCCTTCCTCCAGATACTTCTCTTCTAGGAAGAGAGTCTGAGGTTGAGGCGTGGTTCTGGTaGCCACAGCAGTTGTTGATC +
Preference number: 2 (lower is better)
Translates to: PDLSLPPDTSLLGRESEVEAWFW*PQQLLI
Trigger: GATCAACAACTGCTGTGGTCACCAGAACCACGCCTC...AACCTCAGACTCTCTTCCTAGAAGAGAAGTATCTGGAGGAAGGCTAAGGTCAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR TCA 90 bp TGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTGCACTCATGTCAATCTTaGCTGTGTTCCACCCAAAGG +
Preference number: 2 (lower is better)
Translates to: CSMNLLGRACPLLLPLPLHSCQS*LCSTQR
Trigger: CCTTTGGGTGGAACACAGTCAAGATTGACATGAGTG...CAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp AGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGAAGTaGAAAGACGGCAGGAATTCA +
Preference number: 2 (lower is better)
Translates to: RCAAHRKGKLLTGLERPCFSRKK*KDGRNS
Trigger: TGAATTCCTGCCGTCTTTCCACTTCTTCCTACTGAA...GCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CCA 90 bp TGTGAATTTGGGTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTGAAAGACAGCAGTGCTaGTGCTCATCTGCACTGGGA +
Preference number: 2 (lower is better)
Translates to: CEFGWVSSSCGLRLAHFCERQQC*CSSALG
Trigger: TCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTC...ACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCACCCAAATTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CAA 90 bp GTTCGCCTCATGATCACTGGAGCCGCCCCCATCTCCACTCCAGTCTaGACATTCTTCAGGGAGTTTCAGAGGTTTAGTCCATTATCATCA +
Preference number: 2 (lower is better)
Translates to: VRLMITGAAPISTPV*TFFREFQRFSPLSS
Trigger: TGATGATAATGGACTAAACCTCTGAAACTCCCTGAAGAATGTCAAGACTGGAGTGGAGATGGGGGCGGCTCCAGTGATCATGAGGCGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CAA 90 bp GCAGAGCTAGCCTCTCCCTTAGGAACTCTGGGTACCCATGAAGAATaGCAGCTTTTCAGTTCATATGTCATACCTCTGTCTCCGCAGCCT +
Preference number: 2 (lower is better)
Translates to: AELASPLGTLGTHEE*QLFSSYVIPLSPQP
Trigger: AGGCTGCGGAGACAGAGGTATGACATATGAACTGAAAAGCTGCAATTCTTCATGGGTACCCAGAGTTCCTAAGGGAGAGGCTAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR TCA 90 bp CTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGGTAATAAACATTTCTaGAGTCATGGCACTAGGGCA +
Preference number: 2 (lower is better)
Translates to: LLSSGELDLQGKSDVQHTGNKHF*SHGTRA
Trigger: TGCCCTAGTGCCATGACTTCAGAAATGTTTATTACC...TGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR TCA 90 bp ATGCAGTCAGACGCTGGCCTGAACCTGACCTTAGCCTTCCTCCAGATACTTCTCTCTCCTTTCTGTGACTaGGAAGCTGTGAATTTGGGT +
Preference number: 2 (lower is better)
Translates to: MQSDAGLNLTLAFLQILLSPFCD*EAVNLG
Trigger: ACCCAAATTCACAGCTTCTCAGTCACAGAAAGGAGA...GAGAAGTATCTGGAGGAAGGCTAAGGTCAGGTTCAGGCCAGCGTCTGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR TCA 90 bp CACACTACAGAAATGATGGCGTTGAGAATCACAAACTATCTGCCTTCTAAAGAGGGAAGGTTCGCCTCATaGTCACTGGAGCCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: HTTEMMALRITNYLPSKEGRFAS*SLEPPP
Trigger: TGGGGGCGGCTCCAGTGATCATGAGGCGAACCTTCC...CTCTTTAGAAGGCAGATAGTTTGTGATTCTCAACGCCATCATTTCTGTAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR-3UTR CCA 90 bp AGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCAAGGCATATGCAGAATaGCTTCTGTTTCAAAACGGT +
Preference number: 2 (lower is better)
Translates to: RCAAHRKGKLLTGLERPCKAYAE*LLFQNG
Trigger: ACCGTTTTGAAACAGAAGCCATTCTGCATATGCCTT...GCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CCA 90 bp GTAACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTGGGAAGGGACATGCGCACTGGGTTCTGAATaGGGAAAATGTAACTTGTCG +
Preference number: 2 (lower is better)
Translates to: VTWKDSSAGAHLHWEGTCALGSE*GKCNLS
Trigger: CGACAAGTTACATTTTCCCCATTCAGAACCCAGTGC...GCATGTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp GTGATCCTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCCTGAGGCAGCAGCACTaGGTTCTGAATGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: VILLECRALKAFPTILATLRQQH*VLNGEN
Trigger: ATTTTCCCCATTCAGAACCCAGTGCTGCTGCCTCAG...GGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CAA 90 bp GCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTaGCACAGCAGATGCTTACCCACTGAGCCACCTTTTGAGATCACT +
Preference number: 2 (lower is better)
Translates to: ASGFICVLSVWTLVL*HSRCLPTEPPFEIT
Trigger: AGTGATCTCAAAAGGTGGCTCAGTGGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR-3UTR TCA 90 bp TGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGGCACTAGGGCATCTTTaGGGAAAAGAATACCTTAAG +
Preference number: 2 (lower is better)
Translates to: WGIRPAGEVRCAAHRKGKALGHL*GKEYLK
Trigger: CTTAAGGTATTCTTTTCCTCAAAGATGCCCTAGTGC...CTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR GCA 90 bp TTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATCTGTTGATGGAAAGACAGCAGTaGTGGTGCTCATCTGCACTG +
Preference number: 2 (lower is better)
Translates to: FLELWSEACTFLCSMNLLMERQQ*WCSSAL
Trigger: CAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCAT...CAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR GCA 90 bp CCTGACCTTAGCCTTCCTCCAGATACTTCTCTTCTAGGAAGAGAGTCTGAGGTTCTTGTTGCCCTCACCTaGTCTCCAGTCTTTACTGGA +
Preference number: 2 (lower is better)
Translates to: PDLSLPPDTSLLGRESEVLVALT*SPVFTG
Trigger: TCCAGTAAAGACTGGAGAGCAGGTGAGGGCAACAAG...AACCTCAGACTCTCTTCCTAGAAGAGAAGTATCTGGAGGAAGGCTAAGGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp TTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTGGGAAGGGACGCACTGGGTTCTGAATaGGGAAAATGTAACTTGTCG +
Preference number: 2 (lower is better)
Translates to: FSNMERQQCWCSSALGRDALGSE*GKCNLS
Trigger: CGACAAGTTACATTTTCCCCATTCAGAACCCAGTGC...GTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp TTTCCTTGTTGCCCTCACCTGCTCTCCAGTCTTTACTGGACAGTGATCCTTCTACTGAGGCAGCAGCACTaGGTTCTGAATGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: FPCCPHLLSSLYWTVILLLRQQH*VLNGEN
Trigger: ATTTTCCCCATTCAGAACCCAGTGCTGCTGCCTCAG...TAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTGAGGGCAACAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp TTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATCTGTTGGAGGTGGATCTCTCCTaGCTGCACTCATGTCAATCT +
Preference number: 2 (lower is better)
Translates to: FLELWSEACTFLCSMNLLEVDLS*LHSCQS
Trigger: AGATTGACATGAGTGCAGCCAGGAGAGATCCACCTC...CAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp CAAGATGCTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAAAGGCATATGCAGAATaGCTTCTGTTTCAAAACGGT +
Preference number: 2 (lower is better)
Translates to: QDAPVQWGIRPAGEVRCAKAYAE*LLFQNG
Trigger: ACCGTTTTGAAACAGAAGCCATTCTGCATATGCCTT...TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CCA 90 bp ATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCTTCAGTAGGAAGAAGTaGAAAGACGGCAGGAATTCA +
Preference number: 2 (lower is better)
Translates to: IRPAGEVRCAAHRKGKLLFSRKK*KDGRNS
Trigger: TGAATTCCTGCCGTCTTTCCACTTCTTCCTACTGAA...GAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CCA 90 bp TCATCAAGAATTTTGTCTCCATACAACCAGTATCGCAGCCCTCTCGTTGCTAAGGAAAGACAGCAGTGCTaGTGCTCATCTGCACTGGGA +
Preference number: 2 (lower is better)
Translates to: SSRILSPYNQYRSPLVAKERQQC*CSSALG
Trigger: TCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTC...CTTAGCAACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp CACCTGCTCTCCAGTCTTTACTGGACAGTGATCCTTCTAGAATGCAGGGCTCTGTTCACTTCAGTAACATaGAAAGACAGCAGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: HLLSSLYWTVILLECRALFTSVT*KDSSAG
Trigger: ACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAA...CAGAGCCCTGCATTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CCA 90 bp CACCTGCTCTCCAGTCTTTACTGGACAGTGATCCTTCTAGAATGCAGGGCTCTGATCTTCATTACACATTaGGAAGAGGGGTTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: HLLSSLYWTVILLECRALIFITH*EEGFPR
Trigger: TCTTGGGAACCCCTCTTCCCAATGTGTAATGAAGAT...CAGAGCCCTGCATTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR TCA 90 bp TCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTGCTCATGAAGCACAGAAGCTaGGATCAAACTAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SMNLLGRACPLLLPLPLLMKHRS*DQTKEK
Trigger: TTTCTCTTTAGTTTGATCTCAGCTTCTGTGCTTCAT...GAGCAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR TCA 90 bp GATTATTCTTCCCTCTCTCTCCTGTGCATTCAGGTCTCAGGGAAATTCCATTTCCTTGGCTCATATGTTTaGGAGGCTTGTCCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: DYSSLSLLCIQVSGKFHFLGSYV*EACPGE
Trigger: CTCACCTGGACAAGCCTCTCAAACATATGAGCCAAG...GAAATGGAATTTCCCTGAGACCTGAATGCACAGGAGAGAGAGGGAAGAATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR-3UTR GCA 90 bp ACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGAGAATTCAAAGGCATATaGAGAATGGCTTCTGTTTCA +
Preference number: 2 (lower is better)
Translates to: TERASCSLGWNGLASVGREFKGI*RMASVS
Trigger: TGAAACAGAAGCCATTCTGCATATGCCTTTGAATTC...TCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR GCA 90 bp GTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATCATATTATGCACAGATaGCTATGGGGACTGTATAGG +
Preference number: 2 (lower is better)
Translates to: VGFLELWSEACTFLCSMNHIMHR*LWGLYR
Trigger: CCTATACAGTCCCCATAGGCATCTGTGCATAATATG...ATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp TTCTTCCCTCTCTCTCCTGTGCATTCAGGTCTCAGGGAAATTCCATTTCCTCCATTCACAGAAGAGAGTTaGGATTACAGGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: FFPLSPVHSGLREIPFPPFTEES*DYRCAP
Trigger: TGGTGCACACCTGTAATCCCAACTCTCTTCTGTGAA...TGGAGGAAATGGAATTTCCCTGAGACCTGAATGCACAGGAGAGAGAGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR-3UTR TCA 90 bp TGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATCTGTTGGGACGAGCGTGTTCTAGGAAGAGAGTCTaGGGTTTTTATCTTGACCTT +
Preference number: 2 (lower is better)
Translates to: WSEACTFLCSMNLLGRACSRKRV*GFYLDL
Trigger: AAGGTCAAGATAAAAACCTCAGACTCTCTTCCTAGA...ACACGCTCGTCCCAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR GCA 90 bp ATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCGAATTCAAAGGCATATaGAGAATGGCTTCTGTTTCA +
Preference number: 2 (lower is better)
Translates to: IRPAGEVRCAAHRKGKLLEFKGI*RMASVS
Trigger: TGAAACAGAAGCCATTCTGCATATGCCTTTGAATTC...GAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CCA 90 bp CGGGAATTCAGGATATTGAGTGATGTAGTCACTGGCAATTACCTACAAACCACTTGTGTTCTGAGTGTCTaGACTCTGGTCCTCTTGCAC +
Preference number: 2 (lower is better)
Translates to: REFRILSDVVTGNYLQTTCVLSV*TLVLLH
Trigger: GTGCAAGAGGACCAGAGTCCAGACACTCAGAACACA...AGTGGTTTGTAGGTAATTGCCAGTGACTACATCACTCAATATCCTGAATTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR-3UTR CCA 90 bp GCAGCAGGAATATACCCAGGAGACAGGATTGGAATGAGTTTTCTTAAATCAAAGTCATGGTGGGAAACATaGCAGCATCGAGGCAGACAT +
Preference number: 2 (lower is better)
Translates to: AAGIYPGDRIGMSFLKSKSWWET*QHRGRH
Trigger: ATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGA...CTTTGATTTAAGAAAACTCATTCCAATCCTGTCTCCTGGGTATATTCCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR-3UTR CCA 90 bp TTGCTGGCTGCGGAGCTTTGTTTGAGTAATACACACTACAGAAATGATGGCGTTGTGCACCACTGCATCTaGCTTTATTTGTGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: LLAAELCLSNTHYRNDGVVHHCI*LYLCSE
Trigger: CTCAGAACACAAATAAAGCCAGATGCAGTGGTGCAC...AACGCCATCATTTCTGTAGTGTGTATTACTCAAACAAAGCTCCGCAGCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR-3UTR CCA 90 bp TTGCTGGCTGCGGAGCTTTGTTTGAGTAATACACACTACAGAAATGATGGCGTTTTCACAGAAGAGAGTTaGGATTACAGGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: LLAAELCLSNTHYRNDGVFTEES*DYRCAP
Trigger: TGGTGCACACCTGTAATCCCAACTCTCTTCTGTGAA...AACGCCATCATTTCTGTAGTGTGTATTACTCAAACAAAGCTCCGCAGCCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CAA 90 bp ACTATCAACTATTGGAAGCTGCTGTGTGCGCGGGAATTCAGGATATaGAGTGATGTAGTCACTGGCAATTACCTACAAACCACTGGATTA +
Preference number: 2 (lower is better)
Translates to: TINYWKLLCAREFRI*SDVVTGNYLQTTGL
Trigger: TAATCCAGTGGTTTGTAGGTAATTGCCAGTGACTACATCACTCAATATCCTGAATTCCCGCGCACACAGCAGCTTCCAATAGTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR CAA 90 bp TACCCTTCCACTTCCATACCTTCTATGAAGGAATCATCAAGAATTTaGTCTCCATACAACCAGTATCGCAGCCCTCTCGTTGCTAAGATG +
Preference number: 2 (lower is better)
Translates to: YPSTSIPSMKESSRI*SPYNQYRSPLVAKM
Trigger: CATCTTAGCAACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGTATGGAAGTGGAAGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR TCA 90 bp CTGGCTAGTGTCTTCACTTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATATGAAGCACAGAAGCTaGGATCAAACTAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LASVFTSVTWKDSSAGAHMKHRS*DQTKEK
Trigger: TTTCTCTTTAGTTTGATCTCAGCTTCTGTGCTTCAT...ATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAGACACTAGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR TCA 90 bp TCTATGAAGGAATCATCAAGAATTTTGTCTCCATACAACCAGTATCGCAGCCCTCATTTCTGTGCTCTATaGATCTGTTGGGACGAGCGT +
Preference number: 2 (lower is better)
Translates to: SMKESSRILSPYNQYRSPHFCAL*ICWDER
Trigger: ACGCTCGTCCCAACAGATTCATAGAGCACAGAAATG...AGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp AAGGAATCATCAAGAATTTTGTCTCCATACAACCAGTATCGCAGCCCTCTCGTTACATCCCAACAGCTATaGTTGTTCCCAAAGCCAATC +
Preference number: 2 (lower is better)
Translates to: KESSRILSPYNQYRSPLVTSQQL*LFPKPI
Trigger: GATTGGCTTTGGGAACAACCATAGCTGTTGGGATGT...AACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp ATGCACAGATGCCTATGGGGACTGTATAGGTATCTGTCATATAGTCAAGTAAAGCTCTCCAGTCTTTACTaGACAGTGATCCTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: MHRCLWGLYRYLSYSQVKLSSLY*TVILLE
Trigger: TTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAG...CTTTACTTGACTATATGACAGATACCTATACAGTCCCCATAGGCATCTGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR GCA 90 bp TCTATGAAGGAATCATCAAGAATTTTGTCTCCATACAACCAGTATCGCAGCCCTAGGAATCAAAGTGCTTaGTTTAGAGGGAAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: SMKESSRILSPYNQYRSPRNQSA*FRGKRS
Trigger: ACTTCTCTTCCCTCTAAAGCAAGCACTTTGATTCCT...AGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR GCA 90 bp ATGCACAGATGCCTATGGGGACTGTATAGGTATCTGTCATATAGTCAAGTAAAGGGATTGCCTTTCACTTaGAGCATTTCTGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: MHRCLWGLYRYLSYSQVKGLPFT*SISVCF
Trigger: GAAACAAACAGAAATGCTGCAAGTGAAAGGCAATCC...CTTTACTTGACTATATGACAGATACCTATACAGTCCCCATAGGCATCTGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR GCA 90 bp ATGCACAGATGCCTATGGGGACTGTATAGGTATCTGTCATATAGTCAAGTAAAGCTGATAAGTAAGAGCTaGAGAGAGATATGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: MHRCLWGLYRYLSYSQVKLISKS*REICKK
Trigger: CTTCTTGCATATCTCTCTGCAGCTCTTACTTATCAG...CTTTACTTGACTATATGACAGATACCTATACAGTCCCCATAGGCATCTGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CCA 90 bp GCATGTGACTATGCATGTTATTTTTATGAATTTGGGGTTACTGCTAACAGTCATATCCAGGGGCAGTGGTaGTCCATCTTCATTACACAT +
Preference number: 2 (lower is better)
Translates to: ACDYACYFYEFGVTANSHIQGQW*SIFITH
Trigger: ATGTGTAATGAAGATGGACCACCACTGCCCCTGGAT...ATGACTGTTAGCAGTAACCCCAAATTCATAAAAATAACATGCATAGTCACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 72 bp CAGGCCCCGCATGCACAGCACCATGCAGTCAGACGCTaGCCTGAACCTGACCTTAGCCTTCCTCCAGATACT +
Preference number: 3 (lower is better)
Translates to: QAPHAQHHAVRR*PEPDLSLPPDT
Trigger: AGTATCTGGAGGAAGGCTAAGGTCAGGTTCAGGCCAGCGTCTGACTGCATGGTGCTGTGCATGCGGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 72 bp CACAGTACCCATGTCCAGAAGGGAATAGCACTGTCATaGAAGCTGCTGGCCAGGCCCCGCATGCACAGCACC +
Preference number: 3 (lower is better)
Translates to: HSTHVQKGIALS*KLLARPRMHST
Trigger: GGTGCTGTGCATGCGGGGCCTGGCCAGCAGCTTCCATGACAGTGCTATTCCCTTCTGGACATGGGTACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 72 bp CATCTGCACTGGGAAGGGACATGCAGACTTCAACTGTaGCCCTTATGGGGCCTGAGGCAGCAGCACTGGGTT +
Preference number: 3 (lower is better)
Translates to: HLHWEGTCRLQL*PLWGLRQQHWV
Trigger: AACCCAGTGCTGCTGCCTCAGGCCCCATAAGGGGCACAGTTGAAGTCTGCATGTCCCTTCCCAGTGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp AGCAGTGCTGGTGCTCATCTGCACTGGGAAGGGACATaGAGACTTCAACTGTGCCCCTTATGGGGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: SSAGAHLHWEGT*RLQLCPLWGLR
Trigger: CCTCAGGCCCCATAAGGGGCACAGTTGAAGTCTGCATGTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp GGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTaGTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGA +
Preference number: 3 (lower is better)
Translates to: GKSDVQHTERAS*SLGWNGLASVG
Trigger: TCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR GCA 72 bp GACAGACACGCCTGCCAGAAGACATGTGGCTCACAATaGAGTGGCAGAGCTAGCCTCTCCCTTAGGAACTCT +
Preference number: 3 (lower is better)
Translates to: DRHACQKTCGSQ*SGRASLSLRNS
Trigger: AGAGTTCCTAAGGGAGAGGCTAGCTCTGCCACTGCATTGTGAGCCACATGTCTTCTGGCAGGCGTGTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 72 bp CCATTTGCACTCACCTTCCGCATTTGTCCCCTGCTCTaGAAAGCAGCAGCAGGAATATACCCAGGAGACAGG +
Preference number: 3 (lower is better)
Translates to: PFALTFRICPLL*KAAAGIYPGDR
Trigger: CCTGTCTCCTGGGTATATTCCTGCTGCTGCTTTGCAGAGCAGGGGACAAATGCGGAAGGTGAGTGCAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CCA 72 bp GTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTaGAACGGCCTTGCTTCAGTAGGAAGAAGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: VQHTERASCSLG*NGLASVGRSGK
Trigger: CTTTCCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CAA 90 bp TTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTaGCTGCTTCCTCTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: FLELWSEACTFLCSMNLLGRACP*LLPLPL
Trigger: CAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCC...CAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp AGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTaGTTCAGTAGGAAGAAGTGGAAAGACGGCAGGAAT +
Preference number: 3 (lower is better)
Translates to: RKGKLLTGLERP*FSRKKWKDGRN
Trigger: ATTCCTGCCGTCTTTCCACTTCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR CCA 72 bp ACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTaGGAAGGGACATGCAGACTTCAACTGTGCCCCTTA +
Preference number: 3 (lower is better)
Translates to: TWKDSSAGAHLH*EGTCRLQLCPL
Trigger: TAAGGGGCACAGTTGAAGTCTGCATGTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CCA 72 bp GGCAAACGCAGCCAATCCGAAGGGAACAATTGGAGGTaGATCTCTCCTGGCTGCACTCATGTCAATCTTGAC +
Preference number: 3 (lower is better)
Translates to: GKRSQSEGNNWR*ISPGCTHVNLD
Trigger: GTCAAGATTGACATGAGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCCTTCGGATTGGCTGCGTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 72 bp TGGTTGTTCCCAAAGCCAATCCCAAGGCAAACAAGGTaGCGGCAAACGCAGCCAATCCGAAGGGAACAATTG +
Preference number: 3 (lower is better)
Translates to: WLFPKPIPRQTR*RQTQPIRREQL
Trigger: CAATTGTTCCCTTCGGATTGGCTGCGTTTGCCGCCACCTTGTTTGCCTTGGGATTGGCTTTGGGAACAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CAA 90 bp TTCTTCCCTCTCTCTCCTGTGCATTCAGGTCTCAGGGAAATTCCATTTCCTCCATGGACTCTGGTCCTCTaGCACAGCAGATGCTTACCC +
Preference number: 3 (lower is better)
Translates to: FFPLSPVHSGLREIPFPPWTLVL*HSRCLP
Trigger: GGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCA...TGGAGGAAATGGAATTTCCCTGAGACCTGAATGCACAGGAGAGAGAGGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR TCA 72 bp GCAGCATCGAGGCAGACATGGTGCTGGAGAAGGAGCTaGGAGTTCTACATCTTGATCTTAAGCAGAGTAGGC +
Preference number: 3 (lower is better)
Translates to: AASRQTWCWRRS*EFYILILSRVG
Trigger: GCCTACTCTGCTTAAGATCAAGATGTAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTCGATGCTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR GCA 72 bp TTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTaGTCTATGAATCTGTTGGGACGAGCGTGTCCTTTG +
Preference number: 3 (lower is better)
Translates to: FLELWSEACTFL*SMNLLGRACPL
Trigger: CAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp CTGAGTGTCTGGACTCTGGTCCTCTTGCACAGCAGATaGTTACCCACTGAGCCACCTTTTGAGATCACTCTT +
Preference number: 3 (lower is better)
Translates to: LSVWTLVLLHSR*LPTEPPFEITL
Trigger: AAGAGTGATCTCAAAAGGTGGCTCAGTGGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR CCA 72 bp CTGTGCTCTGCCTTCCCTGAGGGAACTATCAACTATTaGAAGCTGCTGTGTGCGCGGGAATTCAGGATATTG +
Preference number: 3 (lower is better)
Translates to: LCSAFPEGTINY*KLLCAREFRIL
Trigger: CAATATCCTGAATTCCCGCGCACACAGCAGCTTCCAATAGTTGATAGTTCCCTCAGGGAAGGCAGAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR-3UTR CAA 90 bp AGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGCAGAGTAGGCTCGTaGCATAATTCTCAGGTACTA +
Preference number: 3 (lower is better)
Translates to: SGELDLQGKSDVQHTERASRVGS*HNSQVL
Trigger: TAGTACCTGAGAATTATGCAACGAGCCTACTCTGCT...TGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR-3UTR CAA 90 bp TTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTGGGAAGGGACGCACTCATGTCAATCTaGACTGTGTTCCACCCAAAG +
Preference number: 3 (lower is better)
Translates to: FSNMERQQCWCSSALGRDALMSI*TVFHPK
Trigger: CTTTGGGTGGAACACAGTCAAGATTGACATGAGTGC...GTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CAA 90 bp GCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCATAGCTCTCCTTTCTGTGTCCCAACAGCTATGGTaGTTCCCAAAGCCAATCCCA +
Preference number: 3 (lower is better)
Translates to: ALKAFPTILATSIALLSVSQQLW*FPKPIP
Trigger: TGGGATTGGCTTTGGGAACAACCATAGCTGTTGGGA...CACAGAAAGGAGAGCTATGGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR TCA 72 bp AGGTGTGCACCACTGCATCTGGCTTTATTTGTGTTCTaGGTGTCTGGACTCTGGTCCTCTTGCACAGCAGAT +
Preference number: 3 (lower is better)
Translates to: RCAPLHLALFVF*VSGLWSSCTAD
Trigger: ATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGTGCACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR GCA 72 bp CTTCACTTCAGTAACATGGAAAGACAGCAGTGCTGGTaGTCATCTGCACTGGGAAGGGACATGCAGACTTCA +
Preference number: 3 (lower is better)
Translates to: LHFSNMERQQCW*SSALGRDMQTS
Trigger: TGAAGTCTGCATGTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp ATTTGGGTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTaGACATTTCTGTGCTCTATGAATCTGTTGGGACGA +
Preference number: 3 (lower is better)
Translates to: IWVGFLELWSEA*TFLCSMNLLGR
Trigger: TCGTCCCAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCACCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp GCTTACCCACTGAGCCACCTTTTGAGATCACTCTTGTaGAGCTTCGCACTTCAAGTTCTCTCAGGAATGGTG +
Preference number: 3 (lower is better)
Translates to: AYPLSHLLRSLL*SFALQVLSGMV
Trigger: CACCATTCCTGAGAGAACTTGAAGTGCGAAGCTGCACAAGAGTGATCTCAAAAGGTGGCTCAGTGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR GCA 72 bp TCCGAAGGGAACAATTGGAGGTGGATCTCTCCTGGCTaGACTCATGTCAATCTTGACTGTGTTCCACCCAAA +
Preference number: 3 (lower is better)
Translates to: SEGNNWRWISPG*THVNLDCVPPK
Trigger: TTTGGGTGGAACACAGTCAAGATTGACATGAGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCCTTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 72 bp AAACAGAGTAACCACATGCAAGATGCTCCTGTCCAGTaGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCA +
Preference number: 3 (lower is better)
Translates to: KQSNHMQDAPVQ*GIRPAGEVRCA
Trigger: TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTGCATGTGGTTACTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR CCA 72 bp TGTCTTCACTTCAGTAACATGGAAAGACAGCAGTGCTaGTGCTCATCTGCACTGGGAAGGGACATGCAGACT +
Preference number: 3 (lower is better)
Translates to: CLHFSNMERQQC*CSSALGRDMQT
Trigger: AGTCTGCATGTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CCA 72 bp TTTCCTTGTTGCCCTCACCTGCTCTCCAGTCTTTACTaGACAGTGATCCTTCTAGAATGCAGGGCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: FPCCPHLLSSLY*TVILLECRALK
Trigger: CTTCAGAGCCCTGCATTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTGAGGGCAACAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CCA 72 bp CAGAGGTTTAGTCCATTATCATCATGGTGGGAAACATaGCAGCATCGAGGCAGACATGGTGCTGGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: QRFSPLSSWWET*QHRGRHGAGEG
Trigger: TCCTTCTCCAGCACCATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGATGATAATGGACTAAACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CCA 72 bp ACCACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTaGACTCTGGTCCTCTTGCACAGCAGATGCTTACCC +
Preference number: 3 (lower is better)
Translates to: TTASGFICVLSV*TLVLLHSRCLP
Trigger: GGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR-3UTR CAA 90 bp TCATCAAGAATTTTGTCTCCATACAACCAGTATCGCAGCCCTCTCGTTGCTAAGCACAGCCCTCTCGTATaGGCCACTCAAGTCCATCTC +
Preference number: 3 (lower is better)
Translates to: SSRILSPYNQYRSPLVAKHSPLV*ATQVHL
Trigger: GAGATGGACTTGAGTGGCCAATACGAGAGGGCTGTG...CTTAGCAACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR TCA 72 bp TCTGATCCTGGTACTCCATCTTACGAGAGGCCAAACTaGGCTCTTCACAGAAGAGAGTTGGGATTACAGGTG +
Preference number: 3 (lower is better)
Translates to: SDPGTPSYERPN*ALHRRELGLQV
Trigger: CACCTGTAATCCCAACTCTCTTCTGTGAAGAGCTCAGTTTGGCCTCTCGTAAGATGGAGTACCAGGATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR TCA 72 bp AACTCAGGGAAGAAGGACATCCTTTCTCTCAGGTTCTaGTCCTGGTACTCCATCTTACGAGAGGCCAAACTG +
Preference number: 3 (lower is better)
Translates to: NSGKKDILSLRF*SWYSILREAKL
Trigger: CAGTTTGGCCTCTCGTAAGATGGAGTACCAGGATCAGAACCTGAGAGAAAGGATGTCCTTCTTCCCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR TCA 72 bp GAAGCTGCTGTGTGCGCGGGAATTCAGGATATTGAGTaGTGTAGTCACTGGCAATTACCTACAAACCACTGG +
Preference number: 3 (lower is better)
Translates to: EAAVCAGIQDIE*CSHWQLPTNHW
Trigger: CCAGTGGTTTGTAGGTAATTGCCAGTGACTACATCACTCAATATCCTGAATTCCCGCGCACACAGCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR GCA 72 bp TGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTaGTCATTTCTCCTAGTTTCGTTTGATGTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: WDERVLCCFLSL*SFLLVSFDVSF
Trigger: AAAACTCACATCAAACGAAACTAGGAGAAATGAGCAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp CTCTCCAGTCTTTACTGGACAGTGATCCTTCTAGAATaGAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCT +
Preference number: 3 (lower is better)
Translates to: LSSLYWTVILLE*RALKAFPTILA
Trigger: AGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp AGCAATTGTGGATTTCTTTTTCTCGACAGACACGCCTaGCAGAAGACATGTGGCTCACAATGCAGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: SNCGFLFLDRHA*QKTCGSQCSGR
Trigger: TCTGCCACTGCATTGTGAGCCACATGTCTTCTGGCAGGCGTGTCTGTCGAGAAAAAGAAATCCACAATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR CCA 72 bp AGGGAGTTTCAGAGGTTTAGTCCATTATCATCATGGTaGGAAACATGGCAGCATCGAGGCAGACATGGTGCT +
Preference number: 3 (lower is better)
Translates to: REFQRFSPLSSW*ETWQHRGRHGA
Trigger: AGCACCATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGATGATAATGGACTAAACCTCTGAAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR-3UTR CAA 90 bp GCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCATAGCTCTCCTTTCTGTGAAGAGAAGTCAGACATaGAGGAGGAAGGAAGCATCA +
Preference number: 3 (lower is better)
Translates to: ALKAFPTILATSIALLSVKRSQT*RRKEAS
Trigger: TGATGCTTCCTTCCTCCTCAATGTCTGACTTCTCTT...CACAGAAAGGAGAGCTATGGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR-3UTR CAA 90 bp TTTCCTTGTTGCCCTCACCTGCTCTCCAGTCTTTACTGGACAGTGATCCTTCTACATCTTCATTACACATaGGGAAGAGGGGTTCCCAAG +
Preference number: 3 (lower is better)
Translates to: FPCCPHLLSSLYWTVILLHLHYT*GRGVPK
Trigger: CTTGGGAACCCCTCTTCCCAATGTGTAATGAAGATG...TAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTGAGGGCAACAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CAA 90 bp CAGAGGTTTAGTCCATTATCATCATGGTGGGAAACATGGCAGCATCGAGGCAGAAGCAGAGTAGGCTCGTaGCATAATTCTCAGGTACTA +
Preference number: 3 (lower is better)
Translates to: QRFSPLSSWWETWQHRGRSRVGS*HNSQVL
Trigger: TAGTACCTGAGAATTATGCAACGAGCCTACTCTGCT...TCTGCCTCGATGCTGCCATGTTTCCCACCATGATGATAATGGACTAAACCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR TCA 72 bp CATTTTAGCTACCTCCATAGCTCTCCTTTCTGTGACTaGGAAGCTGTGAATTTGGGTGGGTTTCCTCGAGCT +
Preference number: 3 (lower is better)
Translates to: HFSYLHSSPFCD*EAVNLGGFPRA
Trigger: AGCTCGAGGAAACCCACCCAAATTCACAGCTTCTCAGTCACAGAAAGGAGAGCTATGGAGGTAGCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR TCA 72 bp TTTCAGTTCATATGTCATACCTCTGTCTCCGCAGCCTaGTATACTCTAGGGCTCTCTCTCTCTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: FQFICHTSVSAA*YTLGLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGCCCTAGAGTATATCAGGCTGCGGAGACAGAGGTATGACATATGAACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 72 bp GAAGGTGAGGATGAGCAAAGCAGGAATCAAAGTGCTTaGTTTAGAGGGAAGAGAAGTCAGACATTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: EGEDEQSRNQSA*FRGKRSQTLRR
Trigger: CCTCCTCAATGTCTGACTTCTCTTCCCTCTAAAGCAAGCACTTTGATTCCTGCTTTGCTCATCCTCACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR GCA 72 bp AATGTTTCCATCAAGGTTCTGAACTGGTTTCCTTGTTaGCCTCACCTGCTCTCCAGTCTTTACTGGACAGTG +
Preference number: 3 (lower is better)
Translates to: NVSIKVLNWFPC*PHLLSSLYWTV
Trigger: CACTGTCCAGTAAAGACTGGAGAGCAGGTGAGGGCAACAAGGAAACCAGTTCAGAACCTTGATGGAAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CCA 72 bp TTCAGGGAGTTTCAGAGGTTTAGTCCATTATCATCATaGTGGGAAACATGGCAGCATCGAGGCAGACATGGT +
Preference number: 3 (lower is better)
Translates to: FREFQRFSPLSS*WETWQHRGRHG
Trigger: ACCATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGATGATAATGGACTAAACCTCTGAAACTCCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CCA 72 bp AGTGTATGTGCTTGTAAGTCAACCAAGTTGGACAGCTaGGCACGCGATTCCACCCATTTTACAGTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: SVCACKSTKLDS*ARDSTHFTVEE
Trigger: TTCCTCTACTGTAAAATGGGTGGAATCGCGTGCCCAGCTGTCCAACTTGGTTGACTTACAAGCACATACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR-3UTR CAA 90 bp CATCTAAGGGAGCATCTTTGTCTCTGCTTTGCTGGCTGCGGAGCTTTGTTTGAGACAGAAATGATGGCGTaGAGAATCACAAACTATCTG +
Preference number: 3 (lower is better)
Translates to: HLREHLCLCFAGCGALFETEMMA*RITNYL
Trigger: CAGATAGTTTGTGATTCTCAACGCCATCATTTCTGT...CTCAAACAAAGCTCCGCAGCCAGCAAAGCAGAGACAAAGATGCTCCCTTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR TCA 72 bp AGAGCTAGCCTCTCCCTTAGGAACTCTGGGTACCCATaGAGAATTGCAGCTTTTCAGTTCATATGTCATACC +
Preference number: 3 (lower is better)
Translates to: RASLSLRNSGYP*RIAAFQFICHT
Trigger: GGTATGACATATGAACTGAAAAGCTGCAATTCTTCATGGGTACCCAGAGTTCCTAAGGGAGAGGCTAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 72 bp AGAATCACAAACTATCTGCCTTCTAAAGAGTCCATTTaGACTCACCTTCCGCATTTGTCCCCTGCTCTGCAA +
Preference number: 3 (lower is better)
Translates to: RITNYLPSKESI*THLPHLSPALQ
Trigger: TTGCAGAGCAGGGGACAAATGCGGAAGGTGAGTGCAAATGGACTCTTTAGAAGGCAGATAGTTTGTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR-3UTR CAA 90 bp TTTTGCTTCAACTGTTCTATTGTGAGGCTGTACTGGTCACAGCCCTCTCGTATTAAGAGAAGTCAGACATaGAGGAGGAAGGAAGCATCA +
Preference number: 3 (lower is better)
Translates to: FCFNCSIVRLYWSQPSRIKRSQT*RRKEAS
Trigger: TGATGCTTCCTTCCTCCTCAATGTCTGACTTCTCTT...AATACGAGAGGGCTGTGACCAGTACAGCCTCACAATAGAACAGTTGAAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR-3UTR CAA 90 bp GGTTCCCGACTTGCTGGCTCCACATTTATTCAAAACTCAGGGAAGAAGGACATCGCTCAACGGCTCTTTTaGTTTCTATTAAACAGGGAA +
Preference number: 3 (lower is better)
Translates to: GSRLAGSTFIQNSGKKDIAQRLF*FLLNRE
Trigger: TTCCCTGTTTAATAGAAACAAAAAGAGCCGTTGAGC...GATGTCCTTCTTCCCTGAGTTTTGAATAAATGTGGAGCCAGCAAGTCGGGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR TCA 72 bp ACTGACATCTCCTTATTAATGTTTCCATCAAGGTTCTaGACTGGTTTCCTTGTTGCCCTCACCTGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: TDISLLMFPSRF*TGFLVALTCSP
Trigger: TGGAGAGCAGGTGAGGGCAACAAGGAAACCAGTTCAGAACCTTGATGGAAACATTAATAAGGAGATGTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR TCA 72 bp TCTTTGTCTCTGCTTTGCTGGCTGCGGAGCTTTGTTTaGGTAATACACACTACAGAAATGATGGCGTTGAGA +
Preference number: 3 (lower is better)
Translates to: SLSLLCWLRSFV*VIHTTEMMALR
Trigger: TCTCAACGCCATCATTTCTGTAGTGTGTATTACTCAAACAAAGCTCCGCAGCCAGCAAAGCAGAGACAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CCA 72 bp CATCTCCTTATTAATGTTTCCATCAAGGTTCTGAACTaGTTTCCTTGTTGCCCTCACCTGCTCTCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: HLLINVSIKVLN*FPCCPHLLSSL
Trigger: AAGACTGGAGAGCAGGTGAGGGCAACAAGGAAACCAGTTCAGAACCTTGATGGAAACATTAATAAGGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR TCA 72 bp CCTTCCTCCAGATACTTCTCTTCTAGGAAGAGAGTCTaGGGTTTTTATCTTGACCTTGTCTTTGACTGGGTT +
Preference number: 3 (lower is better)
Translates to: PSSRYFSSRKRV*GFYLDLVFDWV
Trigger: AACCCAGTCAAAGACAAGGTCAAGATAAAAACCTCAGACTCTCTTCCTAGAAGAGAAGTATCTGGAGGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR GCA 72 bp TATCAAAACCTGATAAGTAAGAGCTGCAGAGAGATATaGAAGAAGCATCCTTGTATGTCTACACAGTTCCCT +
Preference number: 3 (lower is better)
Translates to: YQNLISKSCREI*KKHPCMSTQFP
Trigger: AGGGAACTGTGTAGACATACAAGGATGCTTCTTGCATATCTCTCTGCAGCTCTTACTTATCAGGTTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR TCA 72 bp CAGCAGCAGGAATATACCCAGGAGACAGGATTGGAATaGGTTTTCTTAAATCAAAGGGTTTACATAGTTCTA +
Preference number: 3 (lower is better)
Translates to: QQQEYTQETGLE*VFLNQRVYIVL
Trigger: TAGAACTATGTAAACCCTTTGATTTAAGAAAACTCATTCCAATCCTGTCTCCTGGGTATATTCCTGCTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR GCA 72 bp GATAGCTATTATTATCAAAACCTGATAAGTAAGAGCTaGAGAGAGATATGCAAGAAGCATCCTTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: DSYYYQNLISKS*REICKKHPCMS
Trigger: AGACATACAAGGATGCTTCTTGCATATCTCTCTGCAGCTCTTACTTATCAGGTTTTGATAATAATAGCTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
3UTR TCA 72 bp TTGAATCTGACAAGTTTTACAGTCTCTAGAAGATTATaGAGGAAATGTCAACTGAGGAAGAAACAGAGTAAC +
Preference number: 3 (lower is better)
Translates to: LNLTSFTVSRRL*RKCQLRKKQSN
Trigger: GTTACTCTGTTTCTTCCTCAGTTGACATTTCCTTCATAATCTTCTAGAGACTGTAAAACTTGTCAGATTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTGGCTGTCGATCGACATaGAAGGGGCCCAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPGCRST*KGPSPP
Trigger: CGGTGGGCTGGGCCCCTTCCATGTCGATCGACAGCC...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR TCA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGATGAAAGCAGCATaGGTGCAGCCCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AHRKGKLLTGLERPCFSRKMKAA*VQPRGA
Trigger: GGCCCCTCTGGGCTGCACTCATGCTGCTTTCATCTT...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGCTCTGGGGCTGGATCTaGGTCACCATCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: AHRKGKLLTGLERPCFSRLWGWI*VTITGT
Trigger: TGTCCCTGTGATGGTGACTCAGATCCAGCCCCAGAG...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGGAGGCGTGGTTCTGGTaGCCACAGCAGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: AHRKGKLLTGLERPCFSREAWFW*PQQLLI
Trigger: GATCAACAACTGCTGTGGTCACCAGAACCACGCCTC...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp AGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCCTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGC +
Preference number: 4 (lower is better)
Translates to: RCAAHRKGKLLTGLERPCLSAMV*TWRLVC
Trigger: GCATACAAGGCGCCACGTTCACACCATTGCAGAAAG...GCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp AGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAAGATGAAAGCAGCATaGGTGCAGCCCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGELDLQGKSDVQHTERAKMKAA*VQPRGA
Trigger: GGCCCCTCTGGGCTGCACTCATGCTGCTTTCATCTT...TGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTAAGATGAAAGCAGCATaGGTGCAGCCCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPKMKAA*VQPRGA
Trigger: GGCCCCTCTGGGCTGCACTCATGCTGCTTTCATCTT...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp AGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCGGGAACAATTGGAGGTaGATCTCTCCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RCAAHRKGKLLTGLERPCGNNWR*ISPGCT
Trigger: AGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCC...GCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp AGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAGAGGCGTGGTTCTGGTaGCCACAGCAGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: SGELDLQGKSDVQHTERAEAWFW*PQQLLI
Trigger: GATCAACAACTGCTGTGGTCACCAGAACCACGCCTC...TGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp GTCAACCAAGTTGGACAGCTGGGCACGCGATTCCACCCATTTTACAGTAGAGGAAAGATGAAAGCAGCATaGGTGCAGCCCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VNQVGQLGTRFHPFYSRGKMKAA*VQPRGA
Trigger: GGCCCCTCTGGGCTGCACTCATGCTGCTTTCATCTT...TCCTCTACTGTAAAATGGGTGGAATCGCGTGCCCAGCTGTCCAACTTGGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGCTCTCGTTGCTAAGATaGACTCTCCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AHRKGKLLTGLERPCFSRLSLLR*TLLSAA
Trigger: GGCTGCAGAAAGGAGAGTTCATCTTAGCAACGAGAG...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp ACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGACCAAGGCAAACAAGGTaGCGGCAAACGCAGCCAATC +
Preference number: 4 (lower is better)
Translates to: TERASCSLGWNGLASVGRPRQTR*RQTQPI
Trigger: GATTGGCTGCGTTTGCCGCCACCTTGTTTGCCTTGG...TCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp TGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGCCAAGGCAAACAAGGTaGCGGCAAACGCAGCCAATC +
Preference number: 4 (lower is better)
Translates to: WGIRPAGEVRCAAHRKGKPRQTR*RQTQPI
Trigger: GATTGGCTGCGTTTGCCGCCACCTTGTTTGCCTTGG...CTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp TGCCAAGCTGTAGTGTATGTGCTTGTAAGTCAACCAAGTTGGACAGCTGGGCACAAGATGAAAGCAGCATaGGTGCAGCCCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CQAVVYVLVSQPSWTAGHKMKAA*VQPRGA
Trigger: GGCCCCTCTGGGCTGCACTCATGCTGCTTTCATCTT...GTGCCCAGCTGTCCAACTTGGTTGACTTACAAGCACATACACTACAGCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGCACTCATGTCAATCTTaGCTGTGTTCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AHRKGKLLTGLERPCFSRHSCQS*LCSTQR
Trigger: CCTTTGGGTGGAACACAGTCAAGATTGACATGAGTG...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp AGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: RCAAHRKGKLLTGLERPCLHFLQ*CERGAL
Trigger: CAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAA...GCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGATCCAGGGGCAGTGGTaGTCCATCTTCATTACACAT +
Preference number: 4 (lower is better)
Translates to: AHRKGKLLTGLERPCFSRIQGQW*SIFITH
Trigger: ATGTGTAATGAAGATGGACCACCACTGCCCCTGGAT...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp GTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTATCCAGGGGCAGTGGTaGTCCATCTTCATTACACAT +
Preference number: 4 (lower is better)
Translates to: VRCAAHRKGKLLTGLERPIQGQW*SIFITH
Trigger: ATGTGTAATGAAGATGGACCACCACTGCCCCTGGAT...AGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp CTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAGGTGGATCTCTCCTaGCTGCACTCATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: LLSSGELDLQGKSDVQHTEVDLS*LHSCQS
Trigger: AGATTGACATGAGTGCAGCCAGGAGAGATCCACCTC...TGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp CTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTGCTGGGAACAATTGGAGGTaGATCTCTCCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: LYESVGTSVSFAASSPSAGNNWR*ISPGCT
Trigger: AGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCC...AGCAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp TTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTTGCACAGCAGATGCTTACCCACCCAAGGCAAACAAGGTaGCGGCAAACGCAGCCAATC +
Preference number: 4 (lower is better)
Translates to: LCSECLDSGPLAQQMLTHPRQTR*RQTQPI
Trigger: GATTGGCTGCGTTTGCCGCCACCTTGTTTGCCTTGG...GTGGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp CAAGATGCTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAACAGCCCTCTCGTATTaGCCACTCAAGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QDAPVQWGIRPAGEVRCATALSY*PLKSIS
Trigger: GGAGATGGACTTGAGTGGCCAATACGAGAGGGCTGT...TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp GTCTTCACTTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTGGGAGGCGTGGTTCTGGTaGCCACAGCAGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: VFTSVTWKDSSAGAHLHWEAWFW*PQQLLI
Trigger: GATCAACAACTGCTGTGGTCACCAGAACCACGCCTC...CCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR TCA 90 bp CATCTAAGGGAGCATCTTTGTCTCTGCTTTGCTGGCTGCGGAGCTTTGTTTGAGGAGGCGTGGTTCTGGTaGCCACAGCAGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: HLREHLCLCFAGCGALFEEAWFW*PQQLLI
Trigger: GATCAACAACTGCTGTGGTCACCAGAACCACGCCTC...CTCAAACAAAGCTCCGCAGCCAGCAAAGCAGAGACAAAGATGCTCCCTTAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp CTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACACACTCATGTCAATCTTaGCTGTGTTCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLSSGELDLQGKSDVQHTHSCQS*LCSTQR
Trigger: CCTTTGGGTGGAACACAGTCAAGATTGACATGAGTG...TGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp TGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTGCTCTCGTTGCTAAGATaGACTCTCCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CSMNLLGRACPLLLPLPLLSLLR*TLLSAA
Trigger: GGCTGCAGAAAGGAGAGTTCATCTTAGCAACGAGAG...CAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR TCA 90 bp TGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGCTCTCGTTGCTAAGATaGACTCTCCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WGIRPAGEVRCAAHRKGKLSLLR*TLLSAA
Trigger: GGCTGCAGAAAGGAGAGTTCATCTTAGCAACGAGAG...CTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp AGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAGAGGTGGATCTCTCCTaGCTGCACTCATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: SGELDLQGKSDVQHTERAEVDLS*LHSCQS
Trigger: AGATTGACATGAGTGCAGCCAGGAGAGATCCACCTC...TGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp CTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTGCTGAGGTGGATCTCTCCTaGCTGCACTCATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: LYESVGTSVSFAASSPSAEVDLS*LHSCQS
Trigger: AGATTGACATGAGTGCAGCCAGGAGAGATCCACCTC...AGCAGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp ATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCGGGAACAATTGGAGGTaGATCTCTCCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: IRPAGEVRCAAHRKGKLLGNNWR*ISPGCT
Trigger: AGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCC...GAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp TTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTTGCACAGCAGATGCTTACCCACGGGAACAATTGGAGGTaGATCTCTCCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: LCSECLDSGPLAQQMLTHGNNWR*ISPGCT
Trigger: AGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCC...GTGGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp ATCCTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCCCAAGGCAAACAAGGTaGCGGCAAACGCAGCCAATC +
Preference number: 4 (lower is better)
Translates to: ILLECRALKAFPTILATSPRQTR*RQTQPI
Trigger: GATTGGCTGCGTTTGCCGCCACCTTGTTTGCCTTGG...GGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp TTGGTCAATATTCCAAGGGCCTCTGATTCAGCACACCCCAGAGACACCTTCAACCCAAGGCAAACAAGGTaGCGGCAAACGCAGCCAATC +
Preference number: 4 (lower is better)
Translates to: LVNIPRASDSAHPRDTFNPRQTR*RQTQPI
Trigger: GATTGGCTGCGTTTGCCGCCACCTTGTTTGCCTTGG...GTTGAAGGTGTCTCTGGGGTGTGCTGAATCAGAGGCCCTTGGAATATTGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CCA 90 bp ATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACAGCCCTCTCGTATTaGCCACTCAAGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: IRPAGEVRCAAHRKGKLLTALSY*PLKSIS
Trigger: GGAGATGGACTTGAGTGGCCAATACGAGAGGGCTGT...GAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp TGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGATGATGGGACCCCAATaGCACAGTCTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: WGIRPAGEVRCAAHRKGKMMGPQ*HSLLKS
Trigger: AGACTTAAGGAGACTGTGTCATTGGGGTCCCATCAT...CTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp TGTGAATTTGGGTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTCTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGC +
Preference number: 4 (lower is better)
Translates to: CEFGWVSSSCGLRLAHFCLSAMV*TWRLVC
Trigger: GCATACAAGGCGCCACGTTCACACCATTGCAGAAAG...ACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCACCCAAATTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR TCA 90 bp CCACTGGATTATTCTTCCCTCTCTCTCCTGTGCATTCAGGTCTCAGGGAAATTCGAGGCGTGGTTCTGGTaGCCACAGCAGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: PLDYSSLSLLCIQVSGKFEAWFW*PQQLLI
Trigger: GATCAACAACTGCTGTGGTCACCAGAACCACGCCTC...GAATTTCCCTGAGACCTGAATGCACAGGAGAGAGAGGGAAGAATAATCCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR GCA 90 bp CTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAATCTGTTACACTTTCTaGAATGGTGTGAACGTGGCG +
Preference number: 4 (lower is better)
Translates to: LLSSGELDLQGKSDVQHTICYTF*NGVNVA
Trigger: CGCCACGTTCACACCATTGCAGAAAGTGTAACAGAT...TGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp CAAGATGCTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGGCGCCTTGTATGCTTaGCAGACTTTACAATACTGG +
Preference number: 4 (lower is better)
Translates to: QDAPVQWGIRPAGEVRCAGALYA*QTLQYW
Trigger: CCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCC...TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp GTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTCTTTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLYESVGTSVSFAASSPSLHFLQ*CERGAL
Trigger: CAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAA...AGAGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp TGTGAATTTGGGTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTACAGCCCTCTCGTATTaGCCACTCAAGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: CEFGWVSSSCGLRLAHFCTALSY*PLKSIS
Trigger: GGAGATGGACTTGAGTGGCCAATACGAGAGGGCTGT...ACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCACCCAAATTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp ATCACTCTTGTGCAGCTTCGCACTTCAAGTTCTCTCAGGAATGGTGATGGCTCCACAGCCCTCTCGTATTaGCCACTCAAGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: ITLVQLRTSSSLRNGDGSTALSY*PLKSIS
Trigger: GGAGATGGACTTGAGTGGCCAATACGAGAGGGCTGT...GGAGCCATCACCATTCCTGAGAGAACTTGAAGTGCGAAGCTGCACAAGAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR CAA 72 bp TCTGAGGCTTGCACATTTCTGTGCTCTATGAATCTGTaGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SEACTFLCSMNL*GRACPLLLPLP
Trigger: AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
3UTR CAA 72 bp ATGATCACTGGAGCCGCCCCCATCTCCACTCCAGTCTaGACATTCTTCAGGGAGTTTCAGAGGTTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: MITGAAPISTPV*TFFREFQRFSP
Trigger: TGGACTAAACCTCTGAAACTCCCTGAAGAATGTCAAGACTGGAGTGGAGATGGGGGCGGCTCCAGTGATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp GTGTGGAGCCAACCTAGGTGTCTTCCCTTGGCTCATATGTTTGAGAGGCTTGTCATGATGGGACCCCAATaGCACAGTCTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: VWSQPRCLPLAHMFERLVMMGPQ*HSLLKS
Trigger: AGACTTAAGGAGACTGTGTCATTGGGGTCCCATCAT...GACAAGCCTCTCAAACATATGAGCCAAGGGAAGACACCTAGGTTGGCTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR TCA 90 bp ATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTTGCACAGCAGCTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGC +
Preference number: 4 (lower is better)
Translates to: IWLYLCSECLDSGPLAQQLSAMV*TWRLVC
Trigger: GCATACAAGGCGCCACGTTCACACCATTGCAGAAAG...CTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp ACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGACCACCCTCTTACTCTTaGAGTACCTTCTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: TERASCSLGWNGLASVGRPPSYS*STFYEG
Trigger: TCCTTCATAGAAGGTACTTCAAGAGTAAGAGGGTGG...TCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR GCA 90 bp AGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAATCTGTTACACTTTCTaGAATGGTGTGAACGTGGCG +
Preference number: 4 (lower is better)
Translates to: SGELDLQGKSDVQHTERAICYTF*NGVNVA
Trigger: CGCCACGTTCACACCATTGCAGAAAGTGTAACAGAT...TGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR GCA 90 bp ATCCTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCGGCAATAGCCTGGGCTaGCTGTTACACTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ILLECRALKAFPTILATSGNSLG*LLHFLQ
Trigger: TTGCAGAAAGTGTAACAGGCAGCCCAGGCTATTGCC...GGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR CCA 90 bp TTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTGGGAAGGGACGGCGCCTTGTATGCTTaGCAGACTTTACAATACTGG +
Preference number: 4 (lower is better)
Translates to: FSNMERQQCWCSSALGRDGALYA*QTLQYW
Trigger: CCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCC...GTCCCTTCCCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp GTGTGGAGCCAACCTAGGTGTCTTCCCTTGGCTCATATGTTTGAGAGGCTTGTCATCCAGGGGCAGTGGTaGTCCATCTTCATTACACAT +
Preference number: 4 (lower is better)
Translates to: VWSQPRCLPLAHMFERLVIQGQW*SIFITH
Trigger: ATGTGTAATGAAGATGGACCACCACTGCCCCTGGAT...GACAAGCCTCTCAAACATATGAGCCAAGGGAAGACACCTAGGTTGGCTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CCA 90 bp ATCGAGGCAGACATGGTGCTGGAGAAGGAGCTGAGAGTTCTACATCTTGATCTTGGGAACAATTGGAGGTaGATCTCTCCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: IEADMVLEKELRVLHLDLGNNWR*ISPGCT
Trigger: AGTGCAGCCAGGAGAGATCCACCTCCAATTGTTCCC...AAGATCAAGATGTAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp CAAGATGCTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAACATCCCAACAGCTATaGTTGTTCCCAAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: QDAPVQWGIRPAGEVRCATSQQL*LFPKPI
Trigger: GATTGGCTTTGGGAACAACCATAGCTGTTGGGATGT...TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp ACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGAAGAACATCCCAACAGCTATaGTTGTTCCCAAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: TERASCSLGWNGLASVGRTSQQL*LFPKPI
Trigger: GATTGGCTTTGGGAACAACCATAGCTGTTGGGATGT...TCTTCCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp ACAGGTGTGCACCACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTACAGCCCTCTCGTATTaGCCACTCAAGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: TGVHHCIWLYLCSECLDSTALSY*PLKSIS
Trigger: GGAGATGGACTTGAGTGGCCAATACGAGAGGGCTGT...AGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGTGCACACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp GTGATCCTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCATGATGGGACCCCAATaGCACAGTCTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: VILLECRALKAFPTILATMMGPQ*HSLLKS
Trigger: AGACTTAAGGAGACTGTGTCATTGGGGTCCCATCAT...GGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR TCA 90 bp AGGAAGGTGAGGATGAGCAAAGCAGGAATCAAAGTGCTTGCTTTAGAGGGAAGACTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGC +
Preference number: 4 (lower is better)
Translates to: RKVRMSKAGIKVLALEGRLSAMV*TWRLVC
Trigger: GCATACAAGGCGCCACGTTCACACCATTGCAGAAAG...TCTTCCCTCTAAAGCAAGCACTTTGATTCCTGCTTTGCTCATCCTCACCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR TCA 90 bp TGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCACTCATGTCAATCTTaGCTGTGTTCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: WSEACTFLCSMNLLGRACHSCQS*LCSTQR
Trigger: CCTTTGGGTGGAACACAGTCAAGATTGACATGAGTG...ACACGCTCGTCCCAACAGATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR TCA 90 bp GTTCCCGACTTGCTGGCTCCACATTTATTCAAAACTCAGGGAAGAAGGACATCCCTCTCGTTGCTAAGATaGACTCTCCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VPDLLAPHLFKTQGRRTSLSLLR*TLLSAA
Trigger: GGCTGCAGAAAGGAGAGTTCATCTTAGCAACGAGAG...GGATGTCCTTCTTCCCTGAGTTTTGAATAAATGTGGAGCCAGCAAGTCGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR GCA 90 bp GTCAACCAAGTTGGACAGCTGGGCACGCGATTCCACCCATTTTACAGTAGAGGAATCTGTTACACTTTCTaGAATGGTGTGAACGTGGCG +
Preference number: 4 (lower is better)
Translates to: VNQVGQLGTRFHPFYSRGICYTF*NGVNVA
Trigger: CGCCACGTTCACACCATTGCAGAAAGTGTAACAGAT...TCCTCTACTGTAAAATGGGTGGAATCGCGTGCCCAGCTGTCCAACTTGGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR GCA 90 bp AATGTTTCCATCAAGGTTCTGAACTGGTTTCCTTGTTGCCCTCACCTGCTCTCCGCCTGTTACACTTTCTaGAATGGTGTGAACGTGGCG +
Preference number: 4 (lower is better)
Translates to: NVSIKVLNWFPCCPHLLSACYTF*NGVNVA
Trigger: CGCCACGTTCACACCATTGCAGAAAGTGTAACAGGC...GGAGAGCAGGTGAGGGCAACAAGGAAACCAGTTCAGAACCTTGATGGAAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR GCA 90 bp GTCTTCACTTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTGGCAGTGCAAGGCTTTCTaGGATGAGGTTCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VFTSVTWKDSSAGAHLHWQCKAF*DEVPSN
Trigger: ATTGCTTGGAACCTCATCGCAGAAAGCCTTGCACTG...CCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTAGACAGAGTCGATCATaGCCATTGTGGAACATATTG +
Preference number: 4 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPRQSRS*PLWNIL
Trigger: CAATATGTTCCACAATGGCCATGATCGACTCTGTCT...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp CAAGATGCTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAAGACAGAGTCGATCATaGCCATTGTGGAACATATTG +
Preference number: 4 (lower is better)
Translates to: QDAPVQWGIRPAGEVRCARQSRS*PLWNIL
Trigger: CAATATGTTCCACAATGGCCATGATCGACTCTGTCT...TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp GTGTGCACCACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCGGCGCCTTGTATGCTTaGCAGACTTTACAATACTGG +
Preference number: 4 (lower is better)
Translates to: VCTTASGFICVLSVWTLVGALYA*QTLQYW
Trigger: CCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCC...GACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGTGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp GTTGGACAGCTGGGCACGCGATTCCACCCATTTTACAGTAGAGGAAAAGGAAGATTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: VGQLGTRFHPFYSRGKGRLHFLQ*CERGAL
Trigger: CAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAA...TCTTCCTTTTCCTCTACTGTAAAATGGGTGGAATCGCGTGCCCAGCTGTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp AGTCCATTATCATCATGGTGGGAAACATGGCAGCATCGAGGCAGACATGGTGCTATCCAGGGGCAGTGGTaGTCCATCTTCATTACACAT +
Preference number: 4 (lower is better)
Translates to: SPLSSWWETWQHRGRHGAIQGQW*SIFITH
Trigger: ATGTGTAATGAAGATGGACCACCACTGCCCCTGGAT...AGCACCATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGATGATAATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp GGAAGAAGGACATCCTTTCTCTCAGGTTCTGATCCTGGTACTCCATCTTACGAGGAGGTGGATCTCTCCTaGCTGCACTCATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: GRRTSFLSGSDPGTPSYEEVDLS*LHSCQS
Trigger: AGATTGACATGAGTGCAGCCAGGAGAGATCCACCTC...CTCGTAAGATGGAGTACCAGGATCAGAACCTGAGAGAAAGGATGTCCTTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CCA 90 bp TTTTGCTTCAACTGTTCTATTGTGAGGCTGTACTGGTCACAGCCCTCTCGTATTCCGAGGGCAATAGCCTaGGCTGCCTGTTACACTTTC +
Preference number: 4 (lower is better)
Translates to: FCFNCSIVRLYWSQPSRIPRAIA*AACYTF
Trigger: GAAAGTGTAACAGGCAGCCCAGGCTATTGCCCTCGG...AATACGAGAGGGCTGTGACCAGTACAGCCTCACAATAGAACAGTTGAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR CCA 90 bp GGAAGAAGGACATCCTTTCTCTCAGGTTCTGATCCTGGTACTCCATCTTACGAGTCATGGTGGGAAACATaGCAGCATCGAGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: GRRTSFLSGSDPGTPSYESWWET*QHRGRH
Trigger: ATGTCTGCCTCGATGCTGCCATGTTTCCCACCATGA...CTCGTAAGATGGAGTACCAGGATCAGAACCTGAGAGAAAGGATGTCCTTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR CAA 72 bp GATGCTTACCCACTGAGCCACCTTTTGAGATCACTCTaGTGCAGCTTCGCACTTCAAGTTCTCTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: DAYPLSHLLRSL*CSFALQVLSGM
Trigger: CATTCCTGAGAGAACTTGAAGTGCGAAGCTGCACAAGAGTGATCTCAAAAGGTGGCTCAGTGGGTAAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR CAA 72 bp CCTTCTAAAGAGTCCATTTGCACTCACCTTCCGCATTaGTCCCCTGCTCTGCAAAGCAGCAGCAGGAATATA +
Preference number: 4 (lower is better)
Translates to: PSKESICTHLPH*SPALQSSSRNI
Trigger: TATATTCCTGCTGCTGCTTTGCAGAGCAGGGGACAAATGCGGAAGGTGAGTGCAAATGGACTCTTTAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CAA 72 bp TCTCTCTCCACAGACTATAGCTGCATGTCCCACAATTaGCTCATTCCTCTCACAGTACCCATGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLSTDYSCMSHN*LIPLTVPMSRR
Trigger: CCTTCTGGACATGGGTACTGTGAGAGGAATGAGCAAATTGTGGGACATGCAGCTATAGTCTGTGGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR TCA 90 bp AGGAAAAGGAAGAACAGAGGCTCAACGGCTCTTTTTGTTTCTATTAAACAGGGACTCTGGGGCTGGATCTaGGTCACCATCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: RKRKNRGSTALFVSIKQGLWGWI*VTITGT
Trigger: TGTCCCTGTGATGGTGACTCAGATCCAGCCCCAGAG...TCCCTGTTTAATAGAAACAAAAAGAGCCGTTGAGCCTCTGTTCTTCCTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
CDS-3UTR GCA 90 bp CAAGATGCTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAAATACTGGAGATACATaGTATCCTGAGACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: QDAPVQWGIRPAGEVRCANTGDT*YPETFP
Trigger: CGGAAAAGTCTCAGGATAGCATGTATCTCCAGTATT...TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR GCA 90 bp CTTCCCTCTCTCTCCTGTGCATTCAGGTCTCAGGGAAATTCCATTTCCTCCAACATCTGTTACACTTTCTaGAATGGTGTGAACGTGGCG +
Preference number: 4 (lower is better)
Translates to: LPSLSCAFRSQGNSISSNICYTF*NGVNVA
Trigger: CGCCACGTTCACACCATTGCAGAAAGTGTAACAGAT...GTTGGAGGAAATGGAATTTCCCTGAGACCTGAATGCACAGGAGAGAGAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CCA 90 bp CTGGCTAGTGTCTTCACTTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATGGCGCCTTGTATGCTTaGCAGACTTTACAATACTGG +
Preference number: 4 (lower is better)
Translates to: LASVFTSVTWKDSSAGAHGALYA*QTLQYW
Trigger: CCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCC...ATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAGACACTAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp CCTGACCTTAGCCTTCCTCCAGATACTTCTCTTCTAGGAAGAGAGTCTGAGGTTTTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: PDLSLPPDTSLLGRESEVLHFLQ*CERGAL
Trigger: CAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAA...AACCTCAGACTCTCTTCCTAGAAGAGAAGTATCTGGAGGAAGGCTAAGGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR CCA 90 bp CTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCATAATCCAGGGGCAGTGGTaGTCCATCTTCATTACACAT +
Preference number: 4 (lower is better)
Translates to: LLECRALKAFPTILATSIIQGQW*SIFITH
Trigger: ATGTGTAATGAAGATGGACCACCACTGCCCCTGGAT...TATGGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp ATCCTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCACATCCCAACAGCTATaGTTGTTCCCAAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: ILLECRALKAFPTILATSTSQQL*LFPKPI
Trigger: GATTGGCTTTGGGAACAACCATAGCTGTTGGGATGT...GGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp CAGGTTCTGATCCTGGTACTCCATCTTACGAGAGGCCAAACTGAGCTCTTCACAACATCCCAACAGCTATaGTTGTTCCCAAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: QVLILVLHLTRGQTELFTTSQQL*LFPKPI
Trigger: GATTGGCTTTGGGAACAACCATAGCTGTTGGGATGT...TGTGAAGAGCTCAGTTTGGCCTCTCGTAAGATGGAGTACCAGGATCAGAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CCA 90 bp CGAGAGGCCAAACTGAGCTCTTCACAGAAGAGAGTTGGGATTACAGGTGTGCACAGTCCATTATCATCATaGTGGGAAACATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: REAKLSSSQKRVGITGVHSPLSS*WETWQH
Trigger: ATGCTGCCATGTTTCCCACCATGATGATAATGGACT...GTGCACACCTGTAATCCCAACTCTCTTCTGTGAAGAGCTCAGTTTGGCCTCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR TCA 90 bp ATGATTCCGTTACGTAAATTGGTCAATATTCCAAGGGCCTCTGATTCAGCACACCTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGC +
Preference number: 4 (lower is better)
Translates to: MIPLRKLVNIPRASDSAHLSAMV*TWRLVC
Trigger: GCATACAAGGCGCCACGTTCACACCATTGCAGAAAG...GTGTGCTGAATCAGAGGCCCTTGGAATATTGACCAATTTACGTAACGGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR TCA 90 bp CCTTTTGAGATCACTCTTGTGCAGCTTCGCACTTCAAGTTCTCTCAGGAATGGTCACTCATGTCAATCTTaGCTGTGTTCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PFEITLVQLRTSSSLRNGHSCQS*LCSTQR
Trigger: CCTTTGGGTGGAACACAGTCAAGATTGACATGAGTG...ACCATTCCTGAGAGAACTTGAAGTGCGAAGCTGCACAAGAGTGATCTCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp ATTGGCCAACAGTTCTTCCTAGCTGCCTTTTGTAGCAGTCTGCAGGTAGGGCTGCAGACACGCCTTCTATaGAGGAATCATCAAGAATTT +
Preference number: 4 (lower is better)
Translates to: IGQQFFLAAFCSSLQVGLQTRLL*RNHQEF
Trigger: AAATTCTTGATGATTCCTTCATAGAAGGCGTGTCTG...CAGCCCTACCTGCAGACTGCTACAAAAGGCAGCTAGGAAGAACTGTTGGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR GCA 90 bp ATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCAATACTGGAGATACATaGTATCCTGAGACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: IRPAGEVRCAAHRKGKLLNTGDT*YPETFP
Trigger: CGGAAAAGTCTCAGGATAGCATGTATCTCCAGTATT...GAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR GCA 90 bp ATTGGCCAACAGTTCTTCCTAGCTGCCTTTTGTAGCAGTCTGCAGGTAGGGCTGAATACTGGAGATACATaGTATCCTGAGACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: IGQQFFLAAFCSSLQVGLNTGDT*YPETFP
Trigger: CGGAAAAGTCTCAGGATAGCATGTATCTCCAGTATT...CAGCCCTACCTGCAGACTGCTACAAAAGGCAGCTAGGAAGAACTGTTGGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR GCA 90 bp CGAGAGGCCAAACTGAGCTCTTCACAGAAGAGAGTTGGGATTACAGGTGTGCACAATACTGGAGATACATaGTATCCTGAGACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: REAKLSSSQKRVGITGVHNTGDT*YPETFP
Trigger: CGGAAAAGTCTCAGGATAGCATGTATCTCCAGTATT...GTGCACACCTGTAATCCCAACTCTCTTCTGTGAAGAGCTCAGTTTGGCCTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR GCA 90 bp CTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCATAATCTGTTACACTTTCTaGAATGGTGTGAACGTGGCG +
Preference number: 4 (lower is better)
Translates to: LLECRALKAFPTILATSIICYTF*NGVNVA
Trigger: CGCCACGTTCACACCATTGCAGAAAGTGTAACAGAT...TATGGAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp ACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTTGCACACATCCCAACAGCTATaGTTGTTCCCAAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: TASGFICVLSVWTLVLLHTSQQL*LFPKPI
Trigger: GATTGGCTTTGGGAACAACCATAGCTGTTGGGATGT...GTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp ACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTTGCACCCATTATCATCATGGTaGGAAACATGGCAGCATCGA +
Preference number: 4 (lower is better)
Translates to: TASGFICVLSVWTLVLLHPLSSW*ETWQHR
Trigger: TCGATGCTGCCATGTTTCCCACCATGATGATAATGG...GTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR CAA 72 bp TTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTaGCACAGCAGATGCTTACCCACTGAGCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: FICVLSVWTLVL*HSRCLPTEPPF
Trigger: AAAAGGTGGCTCAGTGGGTAAGCATCTGCTGTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CCA 90 bp CCTGACCTTAGCCTTCCTCCAGATACTTCTCTTCTAGGAAGAGAGTCTGAGGTTAGACAGAGTCGATCATaGCCATTGTGGAACATATTG +
Preference number: 4 (lower is better)
Translates to: PDLSLPPDTSLLGRESEVRQSRS*PLWNIL
Trigger: CAATATGTTCCACAATGGCCATGATCGACTCTGTCT...AACCTCAGACTCTCTTCCTAGAAGAGAAGTATCTGGAGGAAGGCTAAGGTCAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR CCA 90 bp CTTACGAGAGGCCAAACTGAGCTCTTCACAGAAGAGAGTTGGGATTACAGGTGTAGACAGAGTCGATCATaGCCATTGTGGAACATATTG +
Preference number: 4 (lower is better)
Translates to: LTRGQTELFTEESWDYRCRQSRS*PLWNIL
Trigger: CAATATGTTCCACAATGGCCATGATCGACTCTGTCT...ACACCTGTAATCCCAACTCTCTTCTGTGAAGAGCTCAGTTTGGCCTCTCGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CCA 90 bp GTGGGTTTCCTCGAGCTGTGGTCTGAGGCTTGCACATTTCTGTGCTCTATGAATGGTTCCAAGCAATTGTaGATTTCTTTTTCTCGACAG +
Preference number: 4 (lower is better)
Translates to: VGFLELWSEACTFLCSMNGSKQL*ISFSRQ
Trigger: CTGTCGAGAAAAAGAAATCCACAATTGCTTGGAACC...ATTCATAGAGCACAGAAATGTGCAAGCCTCAGACCACAGCTCGAGGAAACCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
3UTR CAA 72 bp TATTGGAAGCTGCTGTGTGCGCGGGAATTCAGGATATaGAGTGATGTAGTCACTGGCAATTACCTACAAACC +
Preference number: 4 (lower is better)
Translates to: YWKLLCAREFRI*SDVVTGNYLQT
Trigger: GGTTTGTAGGTAATTGCCAGTGACTACATCACTCAATATCCTGAATTCCCGCGCACACAGCAGCTTCCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
3UTR CAA 72 bp GCCTCTCCCTTAGGAACTCTGGGTACCCATGAAGAATaGCAGCTTTTCAGTTCATATGTCATACCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ASPLGTLGTHEE*QLFSSYVIPLS
Trigger: AGACAGAGGTATGACATATGAACTGAAAAGCTGCAATTCTTCATGGGTACCCAGAGTTCCTAAGGGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR TCA 90 bp TTTGAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTTGCATAATTCTCAGGTACTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGC +
Preference number: 4 (lower is better)
Translates to: FEEKNTLSRVGSLHNSQVLSAMV*TWRLVC
Trigger: GCATACAAGGCGCCACGTTCACACCATTGCAGAAAG...TACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp GCTCCACATTTATTCAAAACTCAGGGAAGAAGGACATCCTTTCTCTCAGGTTCTCACTCATGTCAATCTTaGCTGTGTTCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: APHLFKTQGRRTSFLSGSHSCQS*LCSTQR
Trigger: CCTTTGGGTGGAACACAGTCAAGATTGACATGAGTG...AGAACCTGAGAGAAAGGATGTCCTTCTTCCCTGAGTTTTGAATAAATGTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR TCA 90 bp GCAGCAGGAATATACCCAGGAGACAGGATTGGAATGAGTTTTCTTAAATCAAAGCTCTCGTTGCTAAGATaGACTCTCCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAGIYPGDRIGMSFLKSKLSLLR*TLLSAA
Trigger: GGCTGCAGAAAGGAGAGTTCATCTTAGCAACGAGAG...CTTTGATTTAAGAAAACTCATTCCAATCCTGTCTCCTGGGTATATTCCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
CDS-3UTR GCA 90 bp CTGGCTAGTGTCTTCACTTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATAATACTGGAGATACATaGTATCCTGAGACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: LASVFTSVTWKDSSAGAHNTGDT*YPETFP
Trigger: CGGAAAAGTCTCAGGATAGCATGTATCTCCAGTATT...ATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAGACACTAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CCA 90 bp GCTCCACATTTATTCAAAACTCAGGGAAGAAGGACATCCTTTCTCTCAGGTTCTGGCGCCTTGTATGCTTaGCAGACTTTACAATACTGG +
Preference number: 4 (lower is better)
Translates to: APHLFKTQGRRTSFLSGSGALYA*QTLQYW
Trigger: CCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCC...AGAACCTGAGAGAAAGGATGTCCTTCTTCCCTGAGTTTTGAATAAATGTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CCA 90 bp AGGAAAAGGAAGAACAGAGGCTCAACGGCTCTTTTTGTTTCTATTAAACAGGGAGAGGTGGATCTCTCCTaGCTGCACTCATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: RKRKNRGSTALFVSIKQGEVDLS*LHSCQS
Trigger: AGATTGACATGAGTGCAGCCAGGAGAGATCCACCTC...TCCCTGTTTAATAGAAACAAAAAGAGCCGTTGAGCCTCTGTTCTTCCTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
3UTR CAA 72 bp ATCTTTGTCTCTGCTTTGCTGGCTGCGGAGCTTTGTTaGAGTAATACACACTACAGAAATGATGGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: IFVSALLAAELC*SNTHYRNDGVE
Trigger: CTCAACGCCATCATTTCTGTAGTGTGTATTACTCAAACAAAGCTCCGCAGCCAGCAAAGCAGAGACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CAA 72 bp TGGTTAGAAGGCCGTTTGATGATTCCGTTACGTAAATaGGTCAATATTCCAAGGGCCTCTGATTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: WLEGRLMIPLRK*VNIPRASDSAH
Trigger: GTGTGCTGAATCAGAGGCCCTTGGAATATTGACCAATTTACGTAACGGAATCATCAAACGGCCTTCTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR TCA 90 bp GAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTTGCATAATTCTCAGGTACTAATGATGGGACCCCAATaGCACAGTCTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: EEKNTLSRVGSLHNSQVLMMGPQ*HSLLKS
Trigger: AGACTTAAGGAGACTGTGTCATTGGGGTCCCATCAT...TAGTACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp GAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTTGCATAATTCTCAGGTACTAGGCGCCTTGTATGCTTaGCAGACTTTACAATACTGG +
Preference number: 4 (lower is better)
Translates to: EEKNTLSRVGSLHNSQVLGALYA*QTLQYW
Trigger: CCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCC...TAGTACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp GAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTTGCATAATTCTCAGGTACTATTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: EEKNTLSRVGSLHNSQVLLHFLQ*CERGAL
Trigger: CAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAA...TAGTACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CCA 90 bp CACACTACAGAAATGATGGCGTTGAGAATCACAAACTATCTGCCTTCTAAAGAGTTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: HTTEMMALRITNYLPSKELHFLQ*CERGAL
Trigger: CAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAA...CTCTTTAGAAGGCAGATAGTTTGTGATTCTCAACGCCATCATTTCTGTAGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
CDS-3UTR TCA 90 bp CACACTACAGAAATGATGGCGTTGAGAATCACAAACTATCTGCCTTCTAAAGAGCCACCCTCTTACTCTTaGAGTACCTTCTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: HTTEMMALRITNYLPSKEPPSYS*STFYEG
Trigger: TCCTTCATAGAAGGTACTTCAAGAGTAAGAGGGTGG...CTCTTTAGAAGGCAGATAGTTTGTGATTCTCAACGCCATCATTTCTGTAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CAA 72 bp ACTTCCATACCTTCTATGAAGGAATCATCAAGAATTTaGTCTCCATACAACCAGTATCGCAGCCCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: TSIPSMKESSRI*SPYNQYRSPLV
Trigger: AACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGTATGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR TCA 90 bp TTTGAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTTGCATAATTCTCAGGTACCACCCTCTTACTCTTaGAGTACCTTCTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: FEEKNTLSRVGSLHNSQVPPSYS*STFYEG
Trigger: TCCTTCATAGAAGGTACTTCAAGAGTAAGAGGGTGG...TACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR TCA 90 bp GATTATTCTTCCCTCTCTCTCCTGTGCATTCAGGTCTCAGGGAAATTCCATTTCGAGAGTTCTACATCTTaGTCTTCTATGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: DYSSLSLLCIQVSGKFHFESSTS*SSMKES
Trigger: TGATTCCTTCATAGAAGATCAAGATGTAGAACTCTC...GAAATGGAATTTCCCTGAGACCTGAATGCACAGGAGAGAGAGGGAAGAATAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR TCA 90 bp TTCCACTTCCATACCTTCTATGAAGGAATCATCAAGAATTTTGTCTCCATACAAATGATGGGACCCCAATaGCACAGTCTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: FHFHTFYEGIIKNFVSIQMMGPQ*HSLLKS
Trigger: AGACTTAAGGAGACTGTGTCATTGGGGTCCCATCAT...TTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGTATGGAAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR CCA 90 bp TTTGAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTTGCATAATTCTCAGGTAAGACAGAGTCGATCATaGCCATTGTGGAACATATTG +
Preference number: 4 (lower is better)
Translates to: FEEKNTLSRVGSLHNSQVRQSRS*PLWNIL
Trigger: CAATATGTTCCACAATGGCCATGATCGACTCTGTCT...TACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
3UTR CAA 72 bp GAGTTCTACATCTTGATCTTAAGCAGAGTAGGCTCGTaGCATAATTCTCAGGTACTACATGTGGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: EFYILILSRVGS*HNSQVLHVDFQ
Trigger: TTGAAAATCCACATGTAGTACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGATCAAGATGTAGAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226103.2
3UTR CAA 72 bp TTTGAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTaGCATAATTCTCAGGTACTACATGTGGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FEEKNTLSRVGS*HNSQVLHVDFQ
Trigger: TTGAAAATCCACATGTAGTACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS GCA 90 bp CCCAGCCCACCGAGGGCAATAGCCTGGGCTGCCTGTTACACTTTCTaGAATGGTGTGAACGTGGCGCCTTGTATGCTTGGCAGACTTTAC +
Preference number: 5 (lower is better)
Translates to: PSPPRAIAWAACYTF*NGVNVAPCMLGRLY
Trigger: GTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGGCAGCCCAGGCTATTGCCCTCGGTGGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR CAA 90 bp AGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCCACAGCCCTCTCGTATaGGCCACTCAAGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: RCAAHRKGKLLTGLERPCHSPLV*ATQVHL
Trigger: GAGATGGACTTGAGTGGCCAATACGAGAGGGCTGTG...GCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CAA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGCACAGCCCTCTCGTATaGGCCACTCAAGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: AHRKGKLLTGLERPCFSRHSPLV*ATQVHL
Trigger: GAGATGGACTTGAGTGGCCAATACGAGAGGGCTGTG...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CAA 90 bp GGAAGGGACATGCAGACTTCAACTGTGCCCCTTATGGGGCCTGAGGCAGCAGCATGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: GRDMQTSTVPLMGPEAAACERGA*YAWQTL
Trigger: TAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACA...TGCTGCTGCCTCAGGCCCCATAAGGGGCACAGTTGAAGTCTGCATGTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CAA 90 bp CTGCACTGGGAAGGGACATGCAGACTTCAACTGTGCCCCTTATGGGGCCTGAGGTGGCGCCTTGTATGCTaGGCAGACTTTACAATACTG +
Preference number: 5 (lower is better)
Translates to: LHWEGTCRLQLCPLWGLRWRLVC*ADFTIL
Trigger: CAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCA...CCTCAGGCCCCATAAGGGGCACAGTTGAAGTCTGCATGTCCCTTCCCAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CAA 90 bp GCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGCTTCAGTAGGTGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: AHRKGKLLTGLERPCFSRCERGA*YAWQTL
Trigger: TAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACA...CCTACTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS CCA 90 bp CCCACCGAGGGCAATAGCCTGGGCTGCCTGTTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTGTATGCTTGGCAGACTTTACAATAC +
Preference number: 5 (lower is better)
Translates to: PTEGNSLGCLLHFLQ*CERGALYAWQTLQY
Trigger: GTATTGTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGGCAGCCCAGGCTATTGCCCTCGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS-3UTR CAA 90 bp GTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCACTGGGCTGGAACGGCCTTGGCGCCTTGTATGCTaGGCAGACTTTACAATACTG +
Preference number: 5 (lower is better)
Translates to: VRCAAHRKGKLLTGLERPWRLVC*ADFTIL
Trigger: CAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCA...AGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CAA 90 bp GTCAACCAAGTTGGACAGCTGGGCACGCGATTCCACCCATTTTACAGTAGAGGACACAGCCCTCTCGTATaGGCCACTCAAGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: VNQVGQLGTRFHPFYSRGHSPLV*ATQVHL
Trigger: GAGATGGACTTGAGTGGCCAATACGAGAGGGCTGTG...TCCTCTACTGTAAAATGGGTGGAATCGCGTGCCCAGCTGTCCAACTTGGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CAA 90 bp CAAGATGCTCCTGTCCAGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCATGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: QDAPVQWGIRPAGEVRCACERGA*YAWQTL
Trigger: TAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACA...TGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CAA 90 bp AGTGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCATCCCAACAGCTATGGTaGTTCCCAAAGCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: SGELDLQGKSDVQHTERASQQLW*FPKPIP
Trigger: TGGGATTGGCTTTGGGAACAACCATAGCTGTTGGGA...TGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CAA 90 bp GATCCTTCTAGAATGCAGGGCTCTGAAGGCTTTCCCCACCATTTTAGCTACCTCCACAGCCCTCTCGTATaGGCCACTCAAGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: DPSRMQGSEGFPHHFSYLHSPLV*ATQVHL
Trigger: GAGATGGACTTGAGTGGCCAATACGAGAGGGCTGTG...GAGGTAGCTAAAATGGTGGGGAAAGCCTTCAGAGCCCTGCATTCTAGAAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CAA 90 bp CTGTGCTCTATGAATCTGTTGGGACGAGCGTGTCCTTTGCTGCTTCCTCTCCCTTGGCGCCTTGTATGCTaGGCAGACTTTACAATACTG +
Preference number: 5 (lower is better)
Translates to: LCSMNLLGRACPLLLPLPWRLVC*ADFTIL
Trigger: CAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCA...AGGGAGAGGAAGCAGCAAAGGACACGCTCGTCCCAACAGATTCATAGAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CAA 90 bp TGGGGAATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTGGCGCCTTGTATGCTaGGCAGACTTTACAATACTG +
Preference number: 5 (lower is better)
Translates to: WGIRPAGEVRCAAHRKGKWRLVC*ADFTIL
Trigger: CAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCA...CTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAATTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CAA 90 bp ATTAGACCTGCAGGGGAAGTCAGATGTGCAGCACACAGAAAGGGCAAGTTGCTCTCCCAACAGCTATGGTaGTTCCCAAAGCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: IRPAGEVRCAAHRKGKLLSQQLW*FPKPIP
Trigger: TGGGATTGGCTTTGGGAACAACCATAGCTGTTGGGA...GAGCAACTTGCCCTTTCTGTGTGCTGCACATCTGACTTCCCCTGCAGGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS-3UTR CAA 90 bp CACCTGCTCTCCAGTCTTTACTGGACAGTGATCCTTCTAGAATGCAGGGCTCTGTCCCAACAGCTATGGTaGTTCCCAAAGCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: HLLSSLYWTVILLECRALSQQLW*FPKPIP
Trigger: TGGGATTGGCTTTGGGAACAACCATAGCTGTTGGGA...CAGAGCCCTGCATTCTAGAAGGATCACTGTCCAGTAAAGACTGGAGAGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CAA 90 bp GTCTTCACTTCAGTAACATGGAAAGACAGCAGTGCTGGTGCTCATCTGCACTGGTGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: VFTSVTWKDSSAGAHLHWCERGA*YAWQTL
Trigger: TAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACA...CCAGTGCAGATGAGCACCAGCACTGCTGTCTTTCCATGTTACTGAAGTGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223807.2
ENSMUST00000224291.2
CDS-3UTR CAA 90 bp GTGTGCACCACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCTGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: VCTTASGFICVLSVWTLVCERGA*YAWQTL
Trigger: TAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACA...GACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CAA 90 bp GTGTGCACCACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCTCCCAACAGCTATGGTaGTTCCCAAAGCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: VCTTASGFICVLSVWTLVSQQLW*FPKPIP
Trigger: TGGGATTGGCTTTGGGAACAACCATAGCTGTTGGGA...GACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CAA 90 bp CCTTTTGAGATCACTCTTGTGCAGCTTCGCACTTCAAGTTCTCTCAGGAATGGTCACAGCCCTCTCGTATaGGCCACTCAAGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: PFEITLVQLRTSSSLRNGHSPLV*ATQVHL
Trigger: GAGATGGACTTGAGTGGCCAATACGAGAGGGCTGTG...ACCATTCCTGAGAGAACTTGAAGTGCGAAGCTGCACAAGAGTGATCTCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CAA 90 bp ACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGGTCCTCTTGCACTGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: TASGFICVLSVWTLVLLHCERGA*YAWQTL
Trigger: TAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACA...GTGCAAGAGGACCAGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CAA 90 bp GTTCCCGACTTGCTGGCTCCACATTTATTCAAAACTCAGGGAAGAAGGACATCCGCACTCATGTCAATCTaGACTGTGTTCCACCCAAAG +
Preference number: 5 (lower is better)
Translates to: VPDLLAPHLFKTQGRRTSALMSI*TVFHPK
Trigger: CTTTGGGTGGAACACAGTCAAGATTGACATGAGTGC...GGATGTCCTTCTTCCCTGAGTTTTGAATAAATGTGGAGCCAGCAAGTCGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CAA 90 bp ACAGGTGTGCACCACTGCATCTGGCTTTATTTGTGTTCTGAGTGTCTGGACTCTGCACTCATGTCAATCTaGACTGTGTTCCACCCAAAG +
Preference number: 5 (lower is better)
Translates to: TGVHHCIWLYLCSECLDSALMSI*TVFHPK
Trigger: CTTTGGGTGGAACACAGTCAAGATTGACATGAGTGC...AGAGTCCAGACACTCAGAACACAAATAAAGCCAGATGCAGTGGTGCACACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS-3UTR CAA 90 bp AGGAAGGTGAGGATGAGCAAAGCAGGAATCAAAGTGCTTGCTTTAGAGGGAAGAGCACTCATGTCAATCTaGACTGTGTTCCACCCAAAG +
Preference number: 5 (lower is better)
Translates to: RKVRMSKAGIKVLALEGRALMSI*TVFHPK
Trigger: CTTTGGGTGGAACACAGTCAAGATTGACATGAGTGC...TCTTCCCTCTAAAGCAAGCACTTTGATTCCTGCTTTGCTCATCCTCACCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS-3UTR CAA 90 bp GATTATTCTTCCCTCTCTCTCCTGTGCATTCAGGTCTCAGGGAAATTCCATTTCTCCCAACAGCTATGGTaGTTCCCAAAGCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: DYSSLSLLCIQVSGKFHFSQQLW*FPKPIP
Trigger: TGGGATTGGCTTTGGGAACAACCATAGCTGTTGGGA...GAAATGGAATTTCCCTGAGACCTGAATGCACAGGAGAGAGAGGGAAGAATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS TCA 90 bp GTGGTCCATCTTCATTACACATCTGTTACACTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGCTTGGCAGACTTTACAATACTGGAG +
Preference number: 5 (lower is better)
Translates to: VVHLHYTSVTLSAMV*TWRLVCLADFTILE
Trigger: CTCCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGATGTGTAATGAAGATGGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000076891.7
ENSMUST00000224291.2
ENSMUST00000224897.2
ENSMUST00000225495.2
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS TCA 90 bp GGAAACATGGCAGCATCGAGGCAGACATGGTGCTGGAGAAGGAGCTaGGAGTTCTACATCTTGATCTTCTATGAAGGAATCATCAAGAAT +
Preference number: 5 (lower is better)
Translates to: GNMAASRQTWCWRRS*EFYILIFYEGIIKN
Trigger: ATTCTTGATGATTCCTTCATAGAAGATCAAGATGTAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTCGATGCTGCCATGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CAA 90 bp CTCCACATTTATTCAAAACTCAGGGAAGAAGGACATCCTTTCTCTCAGGTTCTGTGGCGCCTTGTATGCTaGGCAGACTTTACAATACTG +
Preference number: 5 (lower is better)
Translates to: LHIYSKLREEGHPFSQVLWRLVC*ADFTIL
Trigger: CAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCA...CAGAACCTGAGAGAAAGGATGTCCTTCTTCCCTGAGTTTTGAATAAATGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS TCA 90 bp GAGCACTGCAGGTTTGAGGCTGGGTTACACAATGAGAACCTTCTATaGAGGAATCATCAAGAATTTTGTCTCCATACAACCAGTATCGCA +
Preference number: 5 (lower is better)
Translates to: EHCRFEAGLHNENLL*RNHQEFCLHTTSIA
Trigger: TGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGTTCTCATTGTGTAACCCAGCCTCAAACCTGCAGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225495.2
CDS TCA 90 bp CGAGGCAGACATGGTGCTGGAGAAGGAGCTGAGAGTTCTACATCTTaGTCTTCTATGAAGGAATCATCAAGAATTTTGTCTCCATACAAC +
Preference number: 5 (lower is better)
Translates to: RGRHGAGEGAESSTS*SSMKESSRILSPYN
Trigger: GTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGATCAAGATGTAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS-3UTR CAA 90 bp TTTGAGGAAAAGAATACCTTAAGCAGAGTAGGCTCGTTGCATAATTCTCAGGTAGCACTCATGTCAATCTaGACTGTGTTCCACCCAAAG +
Preference number: 5 (lower is better)
Translates to: FEEKNTLSRVGSLHNSQVALMSI*TVFHPK
Trigger: CTTTGGGTGGAACACAGTCAAGATTGACATGAGTGC...TACCTGAGAATTATGCAACGAGCCTACTCTGCTTAAGGTATTCTTTTCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
CDS TCA 90 bp TCCAAGCAATTGTGGATTTCTTTTTCTCGACAGACACGCCTTCTATaGAGGAATCATCAAGAATTTTGTCTCCATACAACCAGTATCGCA +
Preference number: 5 (lower is better)
Translates to: SKQLWISFSRQTRLL*RNHQEFCLHTTSIA
Trigger: TGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGCGTGTCTGTCGAGAAAAAGAAATCCACAATTGCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS GCA 72 bp CCGAGGGCAATAGCCTGGGCTGCCTGTTACACTTTCTaGAATGGTGTGAACGTGGCGCCTTGTATGCTTGGC +
Preference number: 6 (lower is better)
Translates to: PRAIAWAACYTF*NGVNVAPCMLG
Trigger: GCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGGCAGCCCAGGCTATTGCCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS CCA 72 bp GGCAATAGCCTGGGCTGCCTGTTACACTTTCTGCAATaGTGTGAACGTGGCGCCTTGTATGCTTGGCAGACT +
Preference number: 6 (lower is better)
Translates to: GNSLGCLLHFLQ*CERGALYAWQT
Trigger: AGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGGCAGCCCAGGCTATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS CAA 90 bp CTGGGCTGCCTGTTACACTTTCTGCAATGGTGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTACAATACTGGAGATACATGCTATCC +
Preference number: 6 (lower is better)
Translates to: LGCLLHFLQWCERGA*YAWQTLQYWRYMLS
Trigger: GGATAGCATGTATCTCCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGGCAGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223807.2
CDS TCA 72 bp GCAGCATCGAGGCAGACATGGTGCTGGAGAAGGAGCTaGGAGTTCTACATCTTGATCTTCTATGAAGGAATC +
Preference number: 6 (lower is better)
Translates to: AASRQTWCWRRS*EFYILIFYEGI
Trigger: GATTCCTTCATAGAAGATCAAGATGTAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTCGATGCTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225963.2
CDS GCA 72 bp GGTGGTCCATCTTCATTACACATCTGTTACACTTTCTaGAATGGTGTGAACGTGGCGCCTTGTATGCTTGGC +
Preference number: 6 (lower is better)
Translates to: GGPSSLHICYTF*NGVNVAPCMLG
Trigger: GCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGATGTGTAATGAAGATGGACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000076891.7
ENSMUST00000224291.2
ENSMUST00000224897.2
ENSMUST00000225495.2
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS GCA 72 bp TGTATGCTTGGCAGACTTTACAATACTGGAGATACATaGTATCCTGAGACTTTTCCGGTTTCCACCCCCGAG +
Preference number: 6 (lower is better)
Translates to: CMLGRLYNTGDT*YPETFPVSTPE
Trigger: CTCGGGGGTGGAAACCGGAAAAGTCTCAGGATAGCATGTATCTCCAGTATTGTAAAGTCTGCCAAGCATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000076891.7
ENSMUST00000223807.2
ENSMUST00000224291.2
ENSMUST00000224897.2
ENSMUST00000225495.2
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS CCA 72 bp TTTCTGCAATGGTGTGAACGTGGCGCCTTGTATGCTTaGCAGACTTTACAATACTGGAGATACATGCTATCC +
Preference number: 6 (lower is better)
Translates to: FLQWCERGALYA*QTLQYWRYMLS
Trigger: GGATAGCATGTATCTCCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000076891.7
ENSMUST00000223807.2
ENSMUST00000224291.2
ENSMUST00000224897.2
ENSMUST00000225495.2
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS CAA 72 bp CTGTTACACTTTCTGCAATGGTGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTACAATACTGGAGATAC +
Preference number: 6 (lower is better)
Translates to: LLHFLQWCERGA*YAWQTLQYWRY
Trigger: GTATCTCCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000076891.7
ENSMUST00000223807.2
ENSMUST00000224291.2
ENSMUST00000224897.2
ENSMUST00000225495.2
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS TCA 72 bp CTTCATTACACATCTGTTACACTTTCTGCAATGGTGTaGACGTGGCGCCTTGTATGCTTGGCAGACTTTACA +
Preference number: 6 (lower is better)
Translates to: LHYTSVTLSAMV*TWRLVCLADFT
Trigger: TGTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGATGTGTAATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000076891.7
ENSMUST00000224291.2
ENSMUST00000224897.2
ENSMUST00000225495.2
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS CAA 72 bp ACAGACACGCCTTCTATGAAGGAATCATCAAGAATTTaGTCTCCATACAACCAGTATCGCAGCCCTCTCGTT +
Preference number: 6 (lower is better)
Translates to: TDTPSMKESSRI*SPYNQYRSPLV
Trigger: AACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGCGTGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS CAA 90 bp ATTACACATCTGTTACACTTTCTGCAATGGTGTGAACGTGGCGCCTaGTATGCTTGGCAGACTTTACAATACTGGAGATACATGCTATCC +
Preference number: 6 (lower is better)
Translates to: ITHLLHFLQWCERGA*YAWQTLQYWRYMLS
Trigger: GGATAGCATGTATCTCCAGTATTGTAAAGTCTGCCAAGCATACAAGGCGCCACGTTCACACCATTGCAGAAAGTGTAACAGATGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000076891.7
ENSMUST00000224291.2
ENSMUST00000224897.2
ENSMUST00000225495.2
ENSMUST00000225963.2
ENSMUST00000226103.2
CDS CAA 90 bp TTTTTCTCGACAGACACGCCTTCTATGAAGGAATCATCAAGAATTTaGTCTCCATACAACCAGTATCGCAGCCCTCTCGTTGCTAAGATG +
Preference number: 6 (lower is better)
Translates to: FFSTDTPSMKESSRI*SPYNQYRSPLVAKM
Trigger: CATCTTAGCAACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGCGTGTCTGTCGAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS CAA 90 bp CCTCTTACTCTTGAAGTACCTTCTATGAAGGAATCATCAAGAATTTaGTCTCCATACAACCAGTATCGCAGCCCTCTCGTTGCTAAGATG +
Preference number: 6 (lower is better)
Translates to: PLTLEVPSMKESSRI*SPYNQYRSPLVAKM
Trigger: CATCTTAGCAACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGTACTTCAAGAGTAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
ENSMUST00000226103.2
CDS CAA 72 bp CTTGAAGTACCTTCTATGAAGGAATCATCAAGAATTTaGTCTCCATACAACCAGTATCGCAGCCCTCTCGTT +
Preference number: 6 (lower is better)
Translates to: LEVPSMKESSRI*SPYNQYRSPLV
Trigger: AACGAGAGGGCTGCGATACTGGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGTACTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
ENSMUST00000226103.2
CDS TCA 72 bp AGGTTTGAGGCTGGGTTACACAATGAGAACCTTCTATaGAGGAATCATCAAGAATTTTGTCTCCATACAACC +
Preference number: 6 (lower is better)
Translates to: RFEAGLHNENLL*RNHQEFCLHTT
Trigger: GGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGTTCTCATTGTGTAACCCAGCCTCAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225495.2
CDS TCA 72 bp TTGTGGATTTCTTTTTCTCGACAGACACGCCTTCTATaGAGGAATCATCAAGAATTTTGTCTCCATACAACC +
Preference number: 6 (lower is better)
Translates to: LWISFSRQTRLL*RNHQEFCLHTT
Trigger: GGTTGTATGGAGACAAAATTCTTGATGATTCCTTCATAGAAGGCGTGTCTGTCGAGAAAAAGAAATCCACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224291.2
CDS TCA 72 bp TTCCACACAGTTTCTAGGAAACCACCCTCTTACTCTTaGAGTACCTTCTATGAAGGAATCATCAAGAATTTT +
Preference number: 6 (lower is better)
Translates to: FHTVSRKPPSYS*STFYEGIIKNF
Trigger: AAAATTCTTGATGATTCCTTCATAGAAGGTACTTCAAGAGTAAGAGGGTGGTTTCCTAGAAACTGTGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076891.7
ENSMUST00000224897.2
ENSMUST00000226103.2