Pregenerated sensors for ZDHHC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034075Ensembl transcript IDs: ENSMUST00000035840.6
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGATCAAGGAAGGGAAGGTCTTAAAAGATCAAAGGAGGGGGAGGTaGCACTCCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCA | + |
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Preference number: 1 (lower is better) Translates to: GIKEGKVLKDQRRGR*HSSLRVPTLLNLMA Trigger: TGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGGAGTGGCACCTCCCCCTCCTTTGATCTTTTAAGACCTTCCCTTCCTTGATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR CCA 90 bp | AATCTCTTAGCACCAGCAGAGAGTGCTACTTCCTTAGTTGGTAACTaGGACAAAAGAGAGGGAACCATTGAGAAAAGGAAGACTTTAATG | + |
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Preference number: 1 (lower is better) Translates to: NLLAPAESATSLVGN*DKREGTIEKRKTLM Trigger: CATTAAAGTCTTCCTTTTCTCAATGGTTCCCTCTCTTTTGTCCCAGTTACCAACTAAGGAAGTAGCACTCTCTGCTGGTGCTAAGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR-3UTR CCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGTAGGTGCAGAGGTGTaGGGGAAGGGAGGCGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ISHHRHVTDPFPGETRCEVGAEV*GKGGAK Trigger: CTTGGCGCCTCCCTTCCCCCACACCTCTGCACCTAC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGCCCTTTGGTGTAGGTaGAGAGGTGTGGGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: ISHHRHVTDPFPGETRCEALWCR*RGVGEG Trigger: CCCTTCCCCCACACCTCTGCACCTACACCAAAGGGC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCAGAAGGGGAGCCCCTTaGAGGAAGGAAGGTGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: FWFKNDLVPSRASNCTNVRRGAP*RKEGGH Trigger: GTGGCCACCTTCCTTCCTTCAAGGGGCTCCCCTTCT...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCTTGAAGGAAGGAAGGTaGCCACCTGAGGCCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: FWFKNDLVPSRASNCTNVLKEGR*PPEALW Trigger: CCAAAGGGCCTCAGGTGGCCACCTTCCTTCCTTCAA...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAATGTCTCTCTTTTCCTaGTGGTCTAAGGAAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ISHHRHVTDPFPGETRCEMSLFS*WSKERE Trigger: TTCCCTTTCCTTAGACCAGCAGGAAAAGAGAGACAT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR CCA 72 bp | CATGCAAAGAAGGGGAGCCCCTTGAAGGAAGGAAGGTaGCCACCTGAGGCCCTTTGGTGTAGGTGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: HAKKGSPLKEGR*PPEALWCRCRG Trigger: ACCTCTGCACCTACACCAAAGGGCCTCAGGTGGCCACCTTCCTTCCTTCAAGGGGCTCCCCTTCTTTGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| 3UTR CCA 72 bp | ACTCCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATaGCATTTTGTAAAACAAACCTCATCCTCATGGAGT | + |
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Preference number: 3 (lower is better) Translates to: TPVSGSQLSLTS*HFVKQTSSSWS Trigger: ACTCCATGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAACCCTTGTGGGGCTACTaGGAGGTGGCTGGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEPLWGY*EVAGLG Trigger: GCCCAGGCCAGCCACCTCTCAGTAGCCCCACAAGGG...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAACTCCAAGCTGGGTTCTaGGCGGTAGCTGGGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCELQAGF*AVAGMA Trigger: CGCCATCCCAGCTACCGCTCAGAACCCAGCTTGGAG...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCGGCTTCCCGTTGCTaGGCCAGCCGGGCTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTSASRC*ASRADR Trigger: CCTGTCAGCCCGGCTGGCCCAGCAACGGGAAGCCGA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCACTCTCGGCTTCCCGTTaGTGGGCCAGCCGGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSLSASR*WASRAD Trigger: GTCAGCCCGGCTGGCCCAGCAACGGGAAGCCGAGAG...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGGGTTCTCGGTGTGGTaGGCCAGTTGGCAGCAAACG | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEGFSVW*ASWQQT Trigger: CGTTTGCTGCCAACTGGCCCACCACACCGAGAACCC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAGCCCGTGCCCTGAGCTaGCTTGAGGCTGGAGGATCG | + |
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Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSARALS*LEAGGS Trigger: CGATCCTCCAGCCTCAAGTCAGCTCAGGGCACGGGC...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGTCATAACGGACTGGTaGGGGTTCTCGGTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEVITDW*GFSVWW Trigger: CCACCACACCGAGAACCCTCACCAGTCCGTTATGAC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAATCACAGACACTGCAGTaGGAGCATCTAGGAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCESQTLQ*EHLGGR Trigger: CCGCCCTCCTAGATGCTCCCACTGCAGTGTCTGTGA...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAATCTCTGGCTCCAAGCTaGGTTCTGAGCGGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCESLAPS*VLSGSW Trigger: CCAGCTACCGCTCAGAACCCAGCTTGGAGCCAGAGA...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCCTACTGAGAGGTGGCTaGCCTGGGCCAGGGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTLLRGG*PGPGEA Trigger: AGCTTCCCCTGGCCCAGGCCAGCCACCTCTCAGTAG...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTTGGCGCTGGAGGAATaGGGCATGGCGGCTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTLALEE*GMAADV Trigger: CACATCAGCCGCCATGCCTCATTCCTCCAGCGCCAA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAGGTGCCACCCACCCCTaGCACCTTCTTGACTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSGATHP*HLLDSS Trigger: GGAGGAGTCAAGAAGGTGTCAGGGGTGGGTGGCACC...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAAACACACCCATGATGTaGGCTGTCAGGGAAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCENTPMM*AVRERR Trigger: CCTCCTTTCCCTGACAGCTCACATCATGGGTGTGTT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCTGCCCTGAGCTGACTTaGGGCTGGAGGATCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVCPELT*GWRIVS Trigger: GCTCACGATCCTCCAGCCTCAAGTCAGCTCAGGGCA...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCTCAAAGCCCGTGCCCTaGGCTGACTTGAGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVSKPVP*ADLRLE Trigger: CTCCAGCCTCAAGTCAGCTCAGGGCACGGGCTTTGA...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCTGGGCCAGGGGAAGCTaGGCCTATACTCTTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVWARGS*AYTLGL Trigger: CAGCCCAAGAGTATAGGCTCAGCTTCCCCTGGCCCA...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCGGCAGCAAACGTGGATaGCTCTCGGCTTCCCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVGSKRG*LSASRC Trigger: GCAACGGGAAGCCGAGAGGCATCCACGTTTGCTGCC...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAGGTAGGGGGCAGTTGTaGCTGGTTCAGGGGACCCTA | + |
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Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSGRGQL*LVQGTL Trigger: TAGGGTCCCCTGAACCAGGCACAACTGCCCCCTACC...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGTCTCCCCAAATACCTaGGTGCTGGAGAACTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEVSPNT*VLENCR Trigger: TCTGCAGTTCTCCAGCACCCAGGTATTTGGGGAGAC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCGTTCTGAGCGGTAGCTaGGATGGCGGCTGCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTVLSGS*DGGCYL Trigger: CAGATAGCAGCCGCCATCCCAGCTACCGCTCAGAAC...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAAAATATGGCGGCTGCTaGGACCGGTACATACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEKYGGC*DRYILA Trigger: AGCAAGTATGTACCGGTCTCAGCAGCCGCCATATTT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTACAGCAGCCATTGGTaGAGGGATTCACACCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTYSSHW*RDSHLP Trigger: GGGGAGGTGTGAATCCCTTCACCAATGGCTGCTGTA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAATACTTCCTCTGTCTCTaGGACACCAGATGGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEYFLCL*DTRWGF Trigger: AAAGCCCCATCTGGTGTCTCAGAGACAGAGGAAGTA...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCAGCCACACACATCACTaGCATGGTGACAGCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTSHTHH*HGDSSA Trigger: CGCACTGCTGTCACCATGGCAGTGATGTGTGTGGCT...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCCCCCAAATACCTGGGTaGTGGAGAACTGCAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTPQIPG*WRTAED Trigger: GTCCTCTGCAGTTCTCCAGCACCCAGGTATTTGGGG...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAAGCTGGGATGGCGGCTaGTATCTGCAATTGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCESWDGG*YLQLKL Trigger: CAACTTCAATTGCAGATAGCAGCCGCCATCCCAGCT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCCGGCTTAGGAGGAGGTaGAGGTTCTGCATCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTRLRRR*RFCICR Trigger: TCTGCAGATGCAGAACCTCCACCTCCTCCTAAGCCG...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCACGAATGGACTGCAACTaGCCCAGCTCAAAGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSRMDCN*PSSKPV Trigger: CACGGGCTTTGAGCTGGGCCAGTTGCAGTCCATTCG...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCGGCTCTTATAGGAGGTaGAGGTGGTGCCCTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTGSYRR*RWCPLN Trigger: GTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCC...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCAGCTTCTCTCGTTCCTaGAGGGAGGCCACAATGTGG | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTSFSRS*REATMW Trigger: CCACATTGTGGCCTCCCTCCAGGAACGAGAGAAGCT...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCAAAACGGGGAACAGCTaGGCGTCCCAGTGGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTKTGNS*ASQWSL Trigger: AAGACTCCACTGGGACGCCCAGCTGTTCCCCGTTTT...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAAGTTATCTGCCCATCTaGCACTTCTGGTCGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCESYLPI*HFWSKE Trigger: TTCCTTCGACCAGAAGTGTCAGATGGGCAGATAACT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR TCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCAGGCCCTGCCTGTACTaGCTCAAAATCAGGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVRPCLY*LKIRAV Trigger: GACAGCCCTGATTTTGAGTCAGTACAGGCAGGGCCT...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCCGGCTGATGTGCTACTaGTGCTGTAACCTGGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTRLMCY*CCNLVD Trigger: ATCGACCAGGTTACAGCAGCAGTAGCACATCAGCCG...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAAGGAGGTGGAGGTGGTaGCCTCTGAACGAATGGACT | + |
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Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSRRWRW*PLNEWT Trigger: AGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCT...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR GCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGGTGTCAGTAATGGCTaGAATGCTACTTCCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEGVSNG*NATSSV Trigger: GACAGAGGAAGTAGCATTGCAGCCATTACTGACACC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCATGCCCTCTGAACGAATaGACTGCAACTGGCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSCPLNE*TATGPA Trigger: AGCTGGGCCAGTTGCAGTCCATTCGTTCAGAGGGCA...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTATAGGAGGTGGAGGTaGTGCCCTCTGAACGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTYRRWR*CPLNEW Trigger: CCATTCGTTCAGAGGGCACCACCTCCACCTCCTATA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGCACCTGGATACCCTTaGTCTCCACTGTTTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEAPGYP*SPLFCK Trigger: TTTACAAAACAGTGGAGATCAAGGGTATCCAGGTGC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAAGCAGTGCGGACCCCTaGGAGTTCCTCTATGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSSSADP*EFLYVI Trigger: TATCACATAGAGGAACTCTCAGGGGTCCGCACTGCT...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGGATGCCATTATCCATaGTCTTCACAGTTATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEGCHYP*SSQLSA Trigger: GGCAGATAACTGTGAAGATCATGGATAATGGCATCC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCTCTTGGAATCATCTaGGGAGGAACTAGTACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTSLGII*GGTSTG Trigger: CCCCGTACTAGTTCCTCCTCAGATGATTCCAAGAGA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCCTGGTGTTGACTGAATaGCTGAGTCTCCCAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVLVLTE*LSLPSL Trigger: CAGGCTTGGGAGACTCAGGCATTCAGTCAACACCAG...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTTAGCCCATCTGGTTTaGCAAAACGGGGAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTLAHLV*QNGEQL Trigger: CAGCTGTTCCCCGTTTTGGCAAACCAGATGGGCTAA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCGGTAAAAGCGGCAGGTaGCACACCATTTCATTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTGKSGR*HTISFA Trigger: TGCGAATGAAATGGTGTGCCACCTGCCGCTTTTACC...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCCATTGCGTGTCTGATTaGCCAGGCTCTTATAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTHCVSD*PGSYRR Trigger: CCTCCTATAAGAGCCTGGCCAATCAGACACGCAATG...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCTTGGGCTGCCCATTaGATTTGCTGTAGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTSWAAH*ICCRWS Trigger: AGACCACCTACAGCAAATCCAATGGGCAGCCCAAGA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAAGCCAAACACACCCATaGTGTGAGCTGTCAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSSQTHP*CELSGK Trigger: TTTCCCTGACAGCTCACATCATGGGTGTGTTTGGCT...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR GCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCATCTGAACGAATGGACTaGAACTGGCCCAGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSSERMD*NWPSSK Trigger: CTTTGAGCTGGGCCAGTTGCAGTCCATTCGTTCAGA...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCAAGATAGACTTCCATTaGGTGTCTGATTGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTKIDFH*VSDWPG Trigger: GCCTGGCCAATCAGACACGCAATGGAAGTCTATCTT...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR GCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAAAATCTCATAAGTGGTaGCACCCACCCCTGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSKSHKW*HPPLTP Trigger: AGGTGTCAGGGGTGGGTGGCACCACTTATGAGATTT...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCGGGGAAAAATTCCTaGGTCCATAAAGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTSGKNS*VHKGGH Trigger: ATGGCCACCTTTATGGACCCAGGAATTTTTCCCCGA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAAGGATCGTGAGCCACTaGACAATGGATCAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCERIVSH*TMDQNE Trigger: TTCATTTTGATCCATTGTCCAGTGGCTCACGATCCT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCACTGAGCCTATACTCTTaGGCTGCCCATTGGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSLSLYS*AAHWIC Trigger: GCAAATCCAATGGGCAGCCCAAGAGTATAGGCTCAG...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCCAGAAATCTCATAAGTaGTGCCACCCACCCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVQKSHK*CHPPLT Trigger: TGTCAGGGGTGGGTGGCACCACTTATGAGATTTCTG...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCCATACTTGCTGGGTTTaGACCTCTTTCCAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVHTCWV*TSFQTL Trigger: CAGAGTCTGGAAAGAGGTTCAAACCCAGCAAGTATG...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCATGCTGTAGGTGGTCTTaGGCTGTACTTCATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSCCRWS*AVLHLW Trigger: CCAAAGATGAAGTACAGCTCAAGACCACCTACAGCA...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCTGGAGGTTCTGCATCTaGAGACTGGCTCTCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVWRFCI*RLALCY Trigger: ATAACAGAGAGCCAGTCTGCAGATGCAGAACCTCCA...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCTCTGCATCTGCAGACTaGCTCTCTGTTATCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FWFKNDLVPSRASNCTNVSASAD*LSVISR Trigger: CCTAGAGATAACAGAGAGCCAGTCTGCAGATGCAGA...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCAAGGGTGATCTCTTaGAATCATCTGAGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTSRVIS*NHLRRN Trigger: GTTCCTCCTCAGATGATTCCAAGAGATCACCCTTGA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCACTCCTCAATTCTCCCTaGATGCCATTATCCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSLLNSP*MPLSMI Trigger: GATCATGGATAATGGCATCCAGGGAGAATTGAGGAG...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAACTGCTGCTGTAACCTaGTCGATACTTGTACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSTAAVT*SILVHG Trigger: ACCATGTACAAGTATCGACCAGGTTACAGCAGCAGT...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAGCTGTACTTCATCTTTaGGTGTCAGTAATGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSAVLHL*VSVMAA Trigger: TGCAGCCATTACTGACACCCAAAGATGAAGTACAGC...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAAAAGAGAAACATAATTaGATTGTAAATGGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISHHRHVTDPFPGETRCEKEKHN*IVNGHC Trigger: GCAGTGCCCATTTACAATGCAATTATGTTTCTCTTT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAGAAGGAAAGGAGGTCTaGTTACAATTGTCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSEGKEV*LQLSSL Trigger: AAGAGAAGACAATTGTAATCAGACCTCCTTTCCTTC...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS GCA 90 bp | GGTGAGGGTTCTCGGTGTGGTGGGCCAGTTGGCAGCAAACGTGGATaGCTCTCGGCTTCCCGTTGCTGGGCCAGCCGGGCTGACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GEGSRCGGPVGSKRG*LSASRCWASRADRK Trigger: CTTCCTGTCAGCCCGGCTGGCCCAGCAACGGGAAGCCGAGAGGCATCCACGTTTGCTGCCAACTGGCCCACCACACCGAGAACCCTCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS TCA 90 bp | TGTCTGATTGGCCAGGCTCTTATAGGAGGTGGAGGTGGTGCCCTCTaGACGAATGGACTGCAACTGGCCCAGCTCAAAGCCCGTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLIGQALIGGGGGAL*TNGLQLAQLKARAL Trigger: CAGGGCACGGGCTTTGAGCTGGGCCAGTTGCAGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAATCAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS TCA 90 bp | TCTGAACGAATGGACTGCAACTGGCCCAGCTCAAAGCCCGTGCCCTaGGCTGACTTGAGGCTGGAGGATCGTGAGCCACTGGACAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SERMDCNWPSSKPVP*ADLRLEDREPLDNG Trigger: TCCATTGTCCAGTGGCTCACGATCCTCCAGCCTCAAGTCAGCTCAGGGCACGGGCTTTGAGCTGGGCCAGTTGCAGTCCATTCGTTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS TCA 90 bp | GAGGGAGGCCACAATGTGGCGAGACAGATTGTCATAACGGACTGGTaGGGGTTCTCGGTGTGGTGGGCCAGTTGGCAGCAAACGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EGGHNVARQIVITDW*GFSVWWASWQQTWM Trigger: CATCCACGTTTGCTGCCAACTGGCCCACCACACCGAGAACCCTCACCAGTCCGTTATGACAATCTGTCTCGCCACATTGTGGCCTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS GCA 90 bp | CATTGCGTGTCTGATTGGCCAGGCTCTTATAGGAGGTGGAGGTGGTaGCCTCTGAACGAATGGACTGCAACTGGCCCAGCTCAAAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HCVSDWPGSYRRWRW*PLNEWTATGPAQSP Trigger: CGGGCTTTGAGCTGGGCCAGTTGCAGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAATCAGACACGCAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS TCA 90 bp | GCCAGCCACACACATCACTGCCATGGTGACAGCAGTGCGGACCCCTaGGAGTTCCTCTATGTGATAGAGGACATAAAGGAGGCCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASHTHHCHGDSSADP*EFLYVIEDIKEAKA Trigger: GGCTTTGGCCTCCTTTATGTCCTCTATCACATAGAGGAACTCTCAGGGGTCCGCACTGCTGTCACCATGGCAGTGATGTGTGTGGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS GCA 90 bp | TCTCTGGCTCCAAGCTGGGTTCTGAGCGGTAGCTGGGATGGCGGCTaGTATCTGCAATTGAAGTTGGCTCCTTTAAGCTGTCTCCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLAPSWVLSGSWDGG*YLQLKLAPLSCLHD Trigger: GTCGTGGAGACAGCTTAAAGGAGCCAACTTCAATTGCAGATAGCAGCCGCCATCCCAGCTACCGCTCAGAACCCAGCTTGGAGCCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS CCA 90 bp | TTCCATTGCGTGTCTGATTGGCCAGGCTCTTATAGGAGGTGGAGGTaGTGCCCTCTGAACGAATGGACTGCAACTGGCCCAGCTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FHCVSDWPGSYRRWR*CPLNEWTATGPAQS Trigger: GCTTTGAGCTGGGCCAGTTGCAGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAATCAGACACGCAATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS TCA 90 bp | GTCTCCACGACTCAACTTGGCGCTGGAGGAATGAGGCATGGCGGCTaGTGTGCTACTGCTGCTGTAACCTGGTCGATACTTGTACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSTTQLGAGGMRHGG*CATAAVTWSILVHG Trigger: ACCATGTACAAGTATCGACCAGGTTACAGCAGCAGTAGCACATCAGCCGCCATGCCTCATTCCTCCAGCGCCAAGTTGAGTCGTGGAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS CCA 90 bp | ATAGACTTCCATTGCGTGTCTGATTGGCCAGGCTCTTATAGGAGGTaGAGGTGGTGCCCTCTGAACGAATGGACTGCAACTGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IDFHCVSDWPGSYRR*RWCPLNEWTATGPA Trigger: AGCTGGGCCAGTTGCAGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAATCAGACACGCAATGGAAGTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS CCA 90 bp | CTGAGGTCCGGCTTAGGAGGAGGTGGAGGTTCTGCATCTGCAGACTaGCTCTCTGTTATCTCTAGGCTTCCTTTAGACTTAGTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSGLGGGGGSASAD*LSVISRLPLDLVLL Trigger: GAGGAGGACTAAGTCTAAAGGAAGCCTAGAGATAACAGAGAGCCAGTCTGCAGATGCAGAACCTCCACCTCCTCCTAAGCCGGACCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS CCA 90 bp | TTGAAGTTGGCTCCTTTAAGCTGTCTCCACGACTCAACTTGGCGCTaGAGGAATGAGGCATGGCGGCTGATGTGCTACTGCTGCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LKLAPLSCLHDSTWR*RNEAWRLMCYCCCN Trigger: GTTACAGCAGCAGTAGCACATCAGCCGCCATGCCTCATTCCTCCAGCGCCAAGTTGAGTCGTGGAGACAGCTTAAAGGAGCCAACTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CAA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAGGCCTGAGCCTGGTGTaGACTGAATGCCTGAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISHHRHVTDPFPGETRCEGLSLV*TECLSL Trigger: GAGACTCAGGCATTCAGTCAACACCAGGCTCAGGCC...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCACCAGGTAGGGGGCAGTaGTGCCTGGTTCAGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSPGRGQ*CLVQGT Trigger: GGTCCCCTGAACCAGGCACAACTGCCCCCTACCTGG...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CAA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAACTTAGCCCATCTGGTTaGCCAAAACGGGGAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISHHRHVTDPFPGETRCELSPSG*PKRGTA Trigger: AGCTGTTCCCCGTTTTGGCAAACCAGATGGGCTAAG...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS TCA 90 bp | CAGGCCCTGCCTGTACTGACTCAAAATCAGGGCTGTCTGAAGGAGTaGGTAGGCTGTCATAAGATAGACTTCCATTGCGTGTCTGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QALPVLTQNQGCLKE*VGCHKIDFHCVSDW Trigger: CCAATCAGACACGCAATGGAAGTCTATCTTATGACAGCCTACTCACTCCTTCAGACAGCCCTGATTTTGAGTCAGTACAGGCAGGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTTTAAAAATGATCTGGTTCCCTCCAGGGCGAGCAATTGCACAAATGTCGGCTGCTATAGGATATaGATCGGCCCAGGTAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FWFKNDLVPSRASNCTNVGCYRI*IGPGRG Trigger: CCCCCTACCTGGGCCGATCAATATCCTATAGCAGCC...GACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCACCTGTAACCTGTTCATaGGTTGTGCGTCCCCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSPVTCS*VVRPLA Trigger: GGCTAGGGGACGCACAACCAATGAACAGGTTACAGG...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
||
| CDS-3UTR CAA 90 bp | ATCTCCCACCACCGTCATGTAACTGACCCCTTTCCTGGGGAAACTAGATGTGAAAGCTGTACTTCATCTTaGGGTGTCAGTAATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISHHRHVTDPFPGETRCESCTSS*GVSNGC Trigger: GCAGCCATTACTGACACCCAAAGATGAAGTACAGCT...TTCACATCTAGTTTCCCCAGGAAAGGGGTCAGTTACATGACGGTGGTGGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAAGGACACGGCTAACGTaGTTACAGCAGCCATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSRTRLT*LQQPLV Trigger: CACCAATGGCTGCTGTAACAACGTTAGCCGTGTCCT...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAGCTGAGCCTATACTCTaGGGCTGCCCATTGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSAEPIL*GCPLDL Trigger: CAAATCCAATGGGCAGCCCAAGAGTATAGGCTCAGC...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCGAGACCGGTACATACTaGCTGGGTTTGAACCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTETGTY*LGLNLF Trigger: AAAGAGGTTCAAACCCAGCAAGTATGTACCGGTCTC...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCCTCAAGGGTGATCTCTaGGAATCATCTGAGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTLKGDL*ESSEEE Trigger: TTCCTCCTCAGATGATTCCAAGAGATCACCCTTGAG...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS GCA 90 bp | CTCAATTCTCCCTGGATGCCATTATCCATGATCTTCACAGTTATCTaGCCATCTGACACTTCTGGTCGAAGGAAAGGAGGTCTGATTACA | + |
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Preference number: 5 (lower is better) Translates to: LNSPWMPLSMIFTVI*PSDTSGRRKGGLIT Trigger: TGTAATCAGACCTCCTTTCCTTCGACCAGAAGTGTCAGATGGGCAGATAACTGTGAAGATCATGGATAATGGCATCCAGGGAGAATTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCACATACTTGCTGGGTTaGAACCTCTTTCCAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTTYLLG*NLFPDS Trigger: AGAGTCTGGAAAGAGGTTCAAACCCAGCAAGTATGT...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCACGGAAGTCATCTTCTTaGTCTTCATCTTCCTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSRKSSS*SSSSSA Trigger: AGCCGAGGAAGATGAAGACAAAGAAGATGACTTCCG...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCATTGTTACAGCAGCCATaGGTGAAGGGATTCACACCT | + |
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Preference number: 5 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSLLQQP*VKGFTP Trigger: AGGTGTGAATCCCTTCACCAATGGCTGCTGTAACAA...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTTGTCTTCTCTTTCTTaGGTCTCCCCAAATACCTGG | + |
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Preference number: 5 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTLSSLS*VSPNTW Trigger: CCAGGTATTTGGGGAGACCAAAGAAAGAGAAGACAA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTCATCCTCAGGCTGCTATCTGCAATaGAAGTTGGCTCCTTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: GSQLSLTSWHFVKQTSSSGCYLQ*KLAPLS Trigger: GCTTAAAGGAGCCAACTTCAATTGCAGATAGCAGCC...TGAGGATGAGGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CCA 90 bp | GTTATCTCTAGGCTTCCTTTAGACTTAGTCCTCCTCAATTCTCCCTaGATGCCATTATCCATGATCTTCACAGTTATCTGCCCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: VISRLPLDLVLLNSP*MPLSMIFTVICPSD Trigger: GTCAGATGGGCAGATAACTGTGAAGATCATGGATAATGGCATCCAGGGAGAATTGAGGAGGACTAAGTCTAAAGGAAGCCTAGAGATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCAGGGTCCCAACTCTCCTTAACCTCATGGCATTTTGTAAAACAAACCTATCTGCAATTGAAGTaGGCTCCTTTAAGCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: PVSGSQLSLTSWHFVKQTYLQLK*APLSCL Trigger: GAGACAGCTTAAAGGAGCCAACTTCAATTGCAGATA...GGTTTGTTTTACAAAATGCCATGAGGTTAAGGAGAGTTGGGACCCTGAGACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS GCA 72 bp | TCTCGGTGTGGTGGGCCAGTTGGCAGCAAACGTGGATaGCTCTCGGCTTCCCGTTGCTGGGCCAGCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SRCGGPVGSKRG*LSASRCWASRA Trigger: AGCCCGGCTGGCCCAGCAACGGGAAGCCGAGAGGCATCCACGTTTGCTGCCAACTGGCCCACCACACCGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CCA 72 bp | GGGTTCTCGGTGTGGTGGGCCAGTTGGCAGCAAACGTaGATGCCTCTCGGCTTCCCGTTGCTGGGCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: GFSVWWASWQQT*MPLGFPLLGQP Trigger: CGGCTGGCCCAGCAACGGGAAGCCGAGAGGCATCCACGTTTGCTGCCAACTGGCCCACCACACCGAGAACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS TCA 72 bp | ATGGACTGCAACTGGCCCAGCTCAAAGCCCGTGCCCTaGGCTGACTTGAGGCTGGAGGATCGTGAGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: MDCNWPSSKPVP*ADLRLEDREPL Trigger: CAGTGGCTCACGATCCTCCAGCCTCAAGTCAGCTCAGGGCACGGGCTTTGAGCTGGGCCAGTTGCAGTCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 72 bp | AACGGACTGGTGAGGGTTCTCGGTGTGGTGGGCCAGTaGGCAGCAAACGTGGATGCCTCTCGGCTTCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: NGLVRVLGVVGQ*AANVDASRLPV Trigger: AACGGGAAGCCGAGAGGCATCCACGTTTGCTGCCAACTGGCCCACCACACCGAGAACCCTCACCAGTCCGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 90 bp | GATTGTCATAACGGACTGGTGAGGGTTCTCGGTGTGGTGGGCCAGTaGGCAGCAAACGTGGATGCCTCTCGGCTTCCCGTTGCTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: DCHNGLVRVLGVVGQ*AANVDASRLPVAGP Trigger: TGGCCCAGCAACGGGAAGCCGAGAGGCATCCACGTTTGCTGCCAACTGGCCCACCACACCGAGAACCCTCACCAGTCCGTTATGACAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CCA 72 bp | CTCCACGACTCAACTTGGCGCTGGAGGAATGAGGCATaGCGGCTGATGTGCTACTGCTGCTGTAACCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LHDSTWRWRNEA*RLMCYCCCNLV Trigger: GACCAGGTTACAGCAGCAGTAGCACATCAGCCGCCATGCCTCATTCCTCCAGCGCCAAGTTGAGTCGTGGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS GCA 72 bp | TCTGATTGGCCAGGCTCTTATAGGAGGTGGAGGTGGTaGCCTCTGAACGAATGGACTGCAACTGGCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SDWPGSYRRWRW*PLNEWTATGPA Trigger: AGCTGGGCCAGTTGCAGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAATCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CCA 72 bp | GCTCCTTTAAGCTGTCTCCACGACTCAACTTGGCGCTaGAGGAATGAGGCATGGCGGCTGATGTGCTACTGC | + |
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Preference number: 6 (lower is better) Translates to: APLSCLHDSTWR*RNEAWRLMCYC Trigger: GCAGTAGCACATCAGCCGCCATGCCTCATTCCTCCAGCGCCAAGTTGAGTCGTGGAGACAGCTTAAAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CCA 72 bp | GTGTCTGATTGGCCAGGCTCTTATAGGAGGTGGAGGTaGTGCCCTCTGAACGAATGGACTGCAACTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VSDWPGSYRRWR*CPLNEWTATGP Trigger: TGGGCCAGTTGCAGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAATCAGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 90 bp | AGCTGGGTTCTGAGCGGTAGCTGGGATGGCGGCTGCTATCTGCAATaGAAGTTGGCTCCTTTAAGCTGTCTCCACGACTCAACTTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SWVLSGSWDGGCYLQ*KLAPLSCLHDSTWR Trigger: GCGCCAAGTTGAGTCGTGGAGACAGCTTAAAGGAGCCAACTTCAATTGCAGATAGCAGCCGCCATCCCAGCTACCGCTCAGAACCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS TCA 72 bp | CACAATGTGGCGAGACAGATTGTCATAACGGACTGGTaGGGGTTCTCGGTGTGGTGGGCCAGTTGGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: HNVARQIVITDW*GFSVWWASWQQ Trigger: TTGCTGCCAACTGGCCCACCACACCGAGAACCCTCACCAGTCCGTTATGACAATCTGTCTCGCCACATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 90 bp | CCCAAATACCTGGGTGCTGGAGAACTGCAGAGGACACGGCTAACGTaGTTACAGCAGCCATTGGTGAAGGGATTCACACCTCCCCGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PKYLGAGELQRTRLT*LQQPLVKGFTPPRN Trigger: ATTCCGGGGAGGTGTGAATCCCTTCACCAATGGCTGCTGTAACAACGTTAGCCGTGTCCTCTGCAGTTCTCCAGCACCCAGGTATTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS TCA 72 bp | ACTCAACTTGGCGCTGGAGGAATGAGGCATGGCGGCTaGTGTGCTACTGCTGCTGTAACCTGGTCGATACTT | + |
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Preference number: 6 (lower is better) Translates to: TQLGAGGMRHGG*CATAAVTWSIL Trigger: AAGTATCGACCAGGTTACAGCAGCAGTAGCACATCAGCCGCCATGCCTCATTCCTCCAGCGCCAAGTTGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS GCA 72 bp | ACTTGGCGCTGGAGGAATGAGGCATGGCGGCTGATGTaGTACTGCTGCTGTAACCTGGTCGATACTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: TWRWRNEAWRLM*YCCCNLVDTCT Trigger: TGTACAAGTATCGACCAGGTTACAGCAGCAGTAGCACATCAGCCGCCATGCCTCATTCCTCCAGCGCCAAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS GCA 72 bp | CCAAGCTGGGTTCTGAGCGGTAGCTGGGATGGCGGCTaGTATCTGCAATTGAAGTTGGCTCCTTTAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSWVLSGSWDGG*YLQLKLAPLSC Trigger: ACAGCTTAAAGGAGCCAACTTCAATTGCAGATAGCAGCCGCCATCCCAGCTACCGCTCAGAACCCAGCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CCA 72 bp | CATTGCGTGTCTGATTGGCCAGGCTCTTATAGGAGGTaGAGGTGGTGCCCTCTGAACGAATGGACTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: HCVSDWPGSYRR*RWCPLNEWTAT Trigger: AGTTGCAGTCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAATCAGACACGCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 72 bp | CTGGGTGCTGGAGAACTGCAGAGGACACGGCTAACGTaGTTACAGCAGCCATTGGTGAAGGGATTCACACCT | + |
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Preference number: 6 (lower is better) Translates to: LGAGELQRTRLT*LQQPLVKGFTP Trigger: AGGTGTGAATCCCTTCACCAATGGCTGCTGTAACAACGTTAGCCGTGTCCTCTGCAGTTCTCCAGCACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 72 bp | CTGAGCGGTAGCTGGGATGGCGGCTGCTATCTGCAATaGAAGTTGGCTCCTTTAAGCTGTCTCCACGACTCA | + |
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Preference number: 6 (lower is better) Translates to: LSGSWDGGCYLQ*KLAPLSCLHDS Trigger: TGAGTCGTGGAGACAGCTTAAAGGAGCCAACTTCAATTGCAGATAGCAGCCGCCATCCCAGCTACCGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 72 bp | ACTAGAAATATGGCGGCTGCTGAGACCGGTACATACTaGCTGGGTTTGAACCTCTTTCCAGACTCTGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TRNMAAAETGTY*LGLNLFPDSAG Trigger: GCCCGCAGAGTCTGGAAAGAGGTTCAAACCCAGCAAGTATGTACCGGTCTCAGCAGCCGCCATATTTCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 72 bp | CTGCAGAGGACACGGCTAACGTTGTTACAGCAGCCATaGGTGAAGGGATTCACACCTCCCCGGAATTTACCT | + |
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Preference number: 6 (lower is better) Translates to: LQRTRLTLLQQP*VKGFTPPRNLP Trigger: AGGTAAATTCCGGGGAGGTGTGAATCCCTTCACCAATGGCTGCTGTAACAACGTTAGCCGTGTCCTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 72 bp | GGTAGCTGGGATGGCGGCTGCTATCTGCAATTGAAGTaGGCTCCTTTAAGCTGTCTCCACGACTCAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: GSWDGGCYLQLK*APLSCLHDSTW Trigger: CCAAGTTGAGTCGTGGAGACAGCTTAAAGGAGCCAACTTCAATTGCAGATAGCAGCCGCCATCCCAGCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS CAA 90 bp | GCTGGAGAACTGCAGAGGACACGGCTAACGTTGTTACAGCAGCCATaGGTGAAGGGATTCACACCTCCCCGGAATTTACCTGTAACCTGT | + |
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Preference number: 6 (lower is better) Translates to: AGELQRTRLTLLQQP*VKGFTPPRNLPVTC Trigger: ACAGGTTACAGGTAAATTCCGGGGAGGTGTGAATCCCTTCACCAATGGCTGCTGTAACAACGTTAGCCGTGTCCTCTGCAGTTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS TCA 72 bp | ACACATCACTGCCATGGTGACAGCAGTGCGGACCCCTaGGAGTTCCTCTATGTGATAGAGGACATAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: THHCHGDSSADP*EFLYVIEDIKE Trigger: CTCCTTTATGTCCTCTATCACATAGAGGAACTCTCAGGGGTCCGCACTGCTGTCACCATGGCAGTGATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS TCA 72 bp | TCTTGGGCTGCCCATTGGATTTGCTGTAGGTGGTCTTaGGCTGTACTTCATCTTTGGGTGTCAGTAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SWAAHWICCRWS*AVLHLWVSVMA Trigger: AGCCATTACTGACACCCAAAGATGAAGTACAGCTCAAGACCACCTACAGCAAATCCAATGGGCAGCCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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| CDS TCA 72 bp | TTCCTGCGACCAATACAGTTGTTTACCCAAGGGCAGTaGTGGTCAAATTCCTCCACACAGTTGTCACAGACA | + |
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Preference number: 6 (lower is better) Translates to: FLRPIQLFTQGQ*WSNSSTQLSQT Trigger: TGTCTGTGACAACTGTGTGGAGGAATTTGACCATCACTGCCCTTGGGTAAACAACTGTATTGGTCGCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035840.6 |
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