Pregenerated sensors for ZDHHC24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006463Ensembl transcript IDs: ENSMUST00000006632.8, ENSMUST00000160014.2, ENSMUST00000162720.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTCTCCTTGCCTGGATCCCACCACACCCTTCCAGGGCCAGAGGTaGCAGAGCCCTGGCCCATTGGGATCTCAGGCCTTCTGTAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: DSPCLDPTTPFQGQR*QSPGPLGSQAFCSL Trigger: GAGACTACAGAAGGCCTGAGATCCCAATGGGCCAGGGCTCTGCCACCTCTGGCCCTGGAAGGGTGTGGTGGGATCCAGGCAAGGAGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CCA 90 bp | CGAGCCCACTCCCAGGTGGTCTGTCCCCGAAGCAGCAGCATCCCATaGAAAAGCAGCCCAGCACCACACAACAGTGCACCTGCCACACAC | + |
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Preference number: 1 (lower is better) Translates to: RAHSQVVCPRSSSIP*KSSPAPHNSAPATH Trigger: GTGTGTGGCAGGTGCACTGTTGTGTGGTGCTGGGCTGCTTTTCCATGGGATGCTGCTGCTTCGGGGACAGACCACCTGGGAGTGGGCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| 3UTR TCA 90 bp | GCAAGGCCATCTACAGCCACAGCAGAGCCCCCAAGGGACACAGCCTaGGACTCCTGTGGTCTGGTCTCTCTGTCCAGGCCTAAGATTGGG | + |
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Preference number: 1 (lower is better) Translates to: ARPSTATAEPPRDTA*DSCGLVSLSRPKIG Trigger: CCCAATCTTAGGCCTGGACAGAGAGACCAGACCACAGGAGTCTCAGGCTGTGTCCCTTGGGGGCTCTGCTGTGGCTGTAGATGGCCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTGAGTGGGCCTGCAGCAAGGCTGACAGGGCGGGGCCTAGCAGCACTGAGGGTCACGACGTAGGATaGACACACGGCAGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: RAEWACSKADRAGPSSTEGHDVG*THGRQS Trigger: GCTCTGCCTGCCGTGTGTGCATCCTACGTCGTGACC...CTCAGTGCTGCTAGGCCCCGCCCTGTCAGCCTTGCTGCAGGCCCACTCAGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGCACCTGCCACACACGTGTCCACCACAAAGGCCAGGGCAAACTGGGCCACACTGTGTAGAGGGCTaGGTGGGCCTGCAGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TVHLPHTCPPQRPGQTGPHCVEG*VGLQQG Trigger: GCCTTGCTGCAGGCCCACTCAGCCCTCTACACAGTG...TGGCCCAGTTTGCCCTGGCCTTTGTGGTGGACACGTGTGTGGCAGGTGCACTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGAAAAGGCCAGAACCAGACTAGGGCCCAGCGAGGCCCCAGGGCTGCCTGCAAGCAGCACTGAGATGTaGAGCAGGACACCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LEKARTRLGPSEAPGLPASSTEM*SRTPAE Trigger: CTCTGCTGGTGTCCTGCTCCACATCTCAGTGCTGCT...TGCAGGCAGCCCTGGGGCCTCGCTGGGCCCTAGTCTGGTTCTGGCCTTTTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGTCGGTCAGGCCAAGTAGCCCCCTTGCTAGACCATCCTCTGCCAAAAGGGTGCCCACTACACACATaGAGGGGCAATCGGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GSRSGQVAPLLDHPLPKGCPLHT*RGNRAF Trigger: GAAGGCCCGATTGCCCCTTCATGTGTGTAGTGGGCA...CCCTTTTGGCAGAGGATGGTCTAGCAAGGGGGCTACTTGGCCTGACCGACTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGCACCTGCCACACACGTGTCCACCACAAAGGCCAGGGCAAACTGGGCCATGCCCACTACACACATaGAGGGGCAATCGGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TVHLPHTCPPQRPGQTGPCPLHT*RGNRAF Trigger: GAAGGCCCGATTGCCCCTTCATGTGTGTAGTGGGCA...TGGCCCAGTTTGCCCTGGCCTTTGTGGTGGACACGTGTGTGGCAGGTGCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGGTGGCAGAGCCCTGGCCCATTGGGATCTCAGGCCTTCTGTAGTCTCCGGAACCCAGCAAAGATaGAGGAGGCCAAGAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: ARGGRALAHWDLRPSVVSGTQQR*RRPRTR Trigger: CCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCC...GGAGACTACAGAAGGCCTGAGATCCCAATGGGCCAGGGCTCTGCCACCTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGGTGGCAGAGCCCTGGCCCATTGGGATCTCAGGCCTTCTGTAGTCTCCGAGACTCCTGTGGTCTaGTCTCTCTGTCCAGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: ARGGRALAHWDLRPSVVSETPVV*SLCPGL Trigger: TAGGCCTGGACAGAGAGACCAGACCACAGGAGTCTC...GGAGACTACAGAAGGCCTGAGATCCCAATGGGCCAGGGCTCTGCCACCTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | TCTAGAGCACGTCTGGACTCTCCTTGCCTGGATCCCACCACACCCTTCCAGGGCTGTAGTCTCCAGGCCTaGCATGGGACCTGGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: SRARLDSPCLDPTTPFQGCSLQA*HGTWET Trigger: TGTTTCCCAGGTCCCATGTCAGGCCTGGAGACTACA...GCCCTGGAAGGGTGTGGTGGGATCCAGGCAAGGAGAGTCCAGACGTGCTCTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGACCAAAGACCAGGCCTCTCTGTGAAGGGTGTGCAAGGCCATCTACAGCCGGCACTTTACTACCCTaGAGAGGGGCAGTCGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: QRPKTRPLCEGCARPSTAGTLLP*RGAVGQ Trigger: CTGACCGACTGCCCCTCTGCAGGGTAGTAAAGTGCC...GGCTGTAGATGGCCTTGCACACCCTTCACAGAGAGGCCTGGTCTTTGGTCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | CCAATGGTACCCACACATTACATGTCCATGCATACACCATGCTCTCTCTCTCGCGACCAGGCCTCTCTGTaGAGGGTGTGCAAGGCCATC | + |
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Preference number: 2 (lower is better) Translates to: PMVPTHYMSMHTPCSLSRDQASL*RVCKAI Trigger: GATGGCCTTGCACACCCTTCACAGAGAGGCCTGGTC...GCGAGAGAGAGAGCATGGTGTATGCATGGACATGTAATGTGTGGGTACCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGTCATGGTGGCAAATGTCTTTCATCCTAGCACTCAGAAAGGAGAAGCCAGTCACTGTGTAGAGGGCTaGGTGGGCCTGCAGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PVMVANVFHPSTQKGEASHCVEG*VGLQQG Trigger: GCCTTGCTGCAGGCCCACTCAGCCCTCTACACAGTG...ACTGGCTTCTCCTTTCTGAGTGCTAGGATGAAAGACATTTGCCACCATGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162720.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAGACCCACATCACCTGGAGTCTGGAAAGAGATCCCATCTCCAGGCAAAGGAGCAGGTTGTGGCAGGTaGCCAGGTCATAGCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: TRPTSPGVWKEIPSPGKGAGCGR*PGHSSG Trigger: ACCACTGCTATGACCTGGGCACCTGCCACAACCTGC...TCCTTTGCCTGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGACCAAAGACCAGGCCTCTCTGTGAAGGGTGTGCAAGGCCATCTACAGCCCCTTCCTCCTGCGGCTaGCATGAAGCTAAAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: QRPKTRPLCEGCARPSTAPSSCG*HEAKKF Trigger: GAACTTTTTAGCTTCATGCCAGCCGCAGGAGGAAGG...GGCTGTAGATGGCCTTGCACACCCTTCACAGAGAGGCCTGGTCTTTGGTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTGGCACTTTACTACCCTTCTCTAGAGCACGTCTaGACTCTCCTTGCCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: GTQQRWRRPRTRLALYYPSLEHV*TLLAWI Trigger: GATCCAGGCAAGGAGAGTCCAGACGTGCTCTAGAGA...AGGGTAGTAAAGTGCCAACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACAAGACCCACATCACCTGGAGTCTGGAAAGAGATCCCATCTCCAGGCAAAAGCAGCACTGAGATGTaGAGCAGGACACCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VTRPTSPGVWKEIPSPGKSSTEM*SRTPAE Trigger: CTCTGCTGGTGTCCTGCTCCACATCTCAGTGCTGCT...TTTGCCTGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCACAAGACCCACATCACCTGGAGTCTGGAAAGAGATCCCATCTCCAGGCAAAGGCCAGGGCAAACTaGGCCAGAGACACTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KSQDPHHLESGKRSHLQAKARAN*ARDTLP Trigger: AGGCAAAGTGTCTCTGGCCCAGTTTGCCCTGGCCTT...TGCCTGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTTGTGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACTTCCTTGAGTTTGAGGCCAGTAAGGTCTACATTTCTACCAGCAATCTTGTTCCAGGGCCAGAGGTaGCAGAGCCCTGGCCCATTG | + |
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Preference number: 2 (lower is better) Translates to: WTSLSLRPVRSTFLPAILFQGQR*QSPGPL Trigger: CAATGGGCCAGGGCTCTGCCACCTCTGGCCCTGGAA...CAAGATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAAACTCAAGGAAGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGTGAGGTATAGGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTTCTCCAGGCCTGACATaGGACCTGGGAAACAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: NKVRYRNPAKMEEAKNQVSPGLT*DLGNSN Trigger: GTTGCTGTTTCCCAGGTCCCATGTCAGGCCTGGAGA...AACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCCTATACCTCACTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGTGAGGTATAGGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTAGCAGCAGCATCCCATaGAAAAGCAGCCCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: NKVRYRNPAKMEEAKNQVSSSIP*KSSPAP Trigger: TGGTGCTGGGCTGCTTTTCCATGGGATGCTGCTGCT...AACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCCTATACCTCACTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTCCTTGAGTTTGAGGCCAGTAAGGTCTACATTTCTACCAGCAATCTTGTCTGGACTCTCCTTGCCTaGATCCCACCACACCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: DFLEFEASKVYISTSNLVWTLLA*IPPHPS Trigger: GGAAGGGTGTGGTGGGATCCAGGCAAGGAGAGTCCA...GACAAGATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAAACTCAAGGAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CAA 90 bp | CTAACACGGTCTACTGGATCCCGCTTATTTCAAGGTGGGCTTTCATaGGTGAGATCTGAGGAGCTGATTCTCAGACTGGTATGGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LTRSTGSRLFQGGLS*VRSEELILRLVWKS Trigger: GCTCTTCCATACCAGTCTGAGAATCAGCTCCTCAGATCTCACCAATGAAAGCCCACCTTGAAATAAGCGGGATCCAGTAGACCGTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR GCA 90 bp | AAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGCCCTGGGCACTTTACTACCCTaGAGAGGGGCAGTCGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: KITLHELWSAWKLVILALGTLLP*RGAVGQ Trigger: CTGACCGACTGCCCCTCTGCAGGGTAGTAAAGTGCC...CAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGTGAGGTATAGGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTCCTTCCTCCTGCGGCTaGCATGAAGCTAAAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: NKVRYRNPAKMEEAKNQVPSSCG*HEAKKF Trigger: GAACTTTTTAGCTTCATGCCAGCCGCAGGAGGAAGG...AACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCCTATACCTCACTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACTTCCTTGAGTTTGAGGCCAGTAAGGTCTACATTTCTACCAGCAATCTTGAGAGCCCTGGCCCATTaGGATCTCAGGCCTTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: WTSLSLRPVRSTFLPAILRALAH*DLRPSV Trigger: TACAGAAGGCCTGAGATCCCAATGGGCCAGGGCTCT...CAAGATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAAACTCAAGGAAGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | ACACACAAACAAATGTTAAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTTCCAGGGCCAGAGGTaGCAGAGCCCTGGCCCATTG | + |
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Preference number: 2 (lower is better) Translates to: THKQMLKLPFMNSGVLGSFQGQR*QSPGPL Trigger: CAATGGGCCAGGGCTCTGCCACCTCTGGCCCTGGAA...GCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATTTGTTTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGCCCTGTGGACTCTCCTTGCCTaGATCCCACCACACCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KITLHELWSAWKLVILALWTLLA*IPPHPS Trigger: GGAAGGGTGTGGTGGGATCCAGGCAAGGAGAGTCCA...CAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | GGTATAGGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTGGCACTTTACACCAAAACAACAAAGTaGGGTATAGGAACCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GIGTQQRWRRPRTRLALYTKTTK*GIGTQQ Trigger: TTGCTGGGTTCCTATACCTCACTTTGTTGTTTTGGT...GTAAAGTGCCAACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCCTATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGGTCTACATTTCTACCAGCAATCTTGTCACATGGCCTAGCAGGGCTTTTTCTCTAGAGCACGTCTaGACTCTCCTTGCCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: SKVYISTSNLVTWPSRAFSLEHV*TLLAWI Trigger: GATCCAGGCAAGGAGAGTCCAGACGTGCTCTAGAGA...AAAAGCCCTGCTAGGCCATGTGACAAGATTGCTGGTAGAAATGTAGACCTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGCCCTGAGCCTGAGACTCCTGTaGTCTGGTCTCTCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KITLHELWSAWKLVILALSLRLL*SGLSVQ Trigger: CTGGACAGAGAGACCAGACCACAGGAGTCTCAGGCT...CAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGTGGAAGAGAAAAAGAGGACCATATCACTACATGCAGTAATTTGGACACATGTAGTCTCCAGGCCTaGCATGGGACCTGGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: PCGREKEDHITTCSNLDTCSLQA*HGTWET Trigger: TGTTTCCCAGGTCCCATGTCAGGCCTGGAGACTACA...TGTGTCCAAATTACTGCATGTAGTGATATGGTCCTCTTTTTCTCTTCCACATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATGTGGAAGAGAAAAAGAGGACCATATCACTACATGCAGTAATTTGGACGGAACCCAGCAAAGATaGAGGAGGCCAAGAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPCGREKEDHITTCSNLDGTQQR*RRPRTR Trigger: CCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCC...GTCCAAATTACTGCATGTAGTGATATGGTCCTCTTTTTCTCTTCCACATGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AATGTTAAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGAGCCCACTCCCAGGTaGTCTGTCCCCGAAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NVKITLHELWSAWKLVILEPTPR*SVPEAA Trigger: TGCTGCTTCGGGGACAGACCACCTGGGAGTGGGCTC...CAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGCAAAAGTAAAGCAGATTCAAAGACCAAAGACCAAAGACCAGGCCTCTGAAAGGAGAAGCCAGTaGACTTCCTTGAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SCAKVKQIQRPKTKDQASERRSQ*TSLSLR Trigger: CCTCAAACTCAAGGAAGTCCACTGGCTTCTCCTTTC...AGAGGCCTGGTCTTTGGTCTTTGGTCTTTGAATCTGCTTTACTTTTGCACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | ACACACAAACAAATGTTAAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCAAGGCCAGGGCAAACTaGGCCAGAGACACTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: THKQMLKLPFMNSGVLGSKARAN*ARDTLP Trigger: AGGCAAAGTGTCTCTGGCCCAGTTTGCCCTGGCCTT...GCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATTTGTTTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGCCCTGGAAAGGAGAAGCCAGTaGACTTCCTTGAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: KITLHELWSAWKLVILALERRSQ*TSLSLR Trigger: CCTCAAACTCAAGGAAGTCCACTGGCTTCTCCTTTC...CAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTGCTGTAGACATGTTTCTAGTGCTAATCTCTAGAGCACGTCTGGACTCTTTTTCACTTCAGCTGTaGAAAAGTAAAGCAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: PPAVDMFLVLISRARLDSFSLQL*KSKADS Trigger: TGAATCTGCTTTACTTTTGCACAGCTGAAGTGAAAA...AGAGTCCAGACGTGCTCTAGAGATTAGCACTAGAAACATGTCTACAGCAGGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTGACTTCACAGACGCTTACTTTCTACAAGCTAACACGGTCTACTGGATCTTAGGCCAGTCATGGTaGCAAATGTCTTTCATCCTA | + |
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Preference number: 2 (lower is better) Translates to: KVDFTDAYFLQANTVYWILGQSW*QMSFIL Trigger: TAGGATGAAAGACATTTGCCACCATGACTGGCCTAA...GATCCAGTAGACCGTGTTAGCTTGTAGAAAGTAAGCGTCTGTGAAGTCAACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTATTGAAAATATTGAAGGCTGGCATGGTGGTGCACATATTTAATCTCATTAGCCTGAGACTCCTGTaGTCTGGTCTCTCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ALLKILKAGMVVHIFNLISLRLL*SGLSVQ Trigger: CTGGACAGAGAGACCAGACCACAGGAGTCTCAGGCT...AATGAGATTAAATATGTGCACCACCATGCCAGCCTTCAATATTTTCAATAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CAA 90 bp | TCCTTGAGTTTGAGGCCAGTAAGGTCTACATTTCTACCAGCAATCTaGTCACATGGCCTAGCAGGGCTTTTCTATTTCTTACAGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SLSLRPVRSTFLPAI*SHGLAGLFYFLQNK Trigger: TTTGTTCTGTAAGAAATAGAAAAGCCCTGCTAGGCCATGTGACAAGATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAAACTCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGCCCTGTTAGGCCAGTCATGGTaGCAAATGTCTTTCATCCTA | + |
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Preference number: 2 (lower is better) Translates to: KITLHELWSAWKLVILALLGQSW*QMSFIL Trigger: TAGGATGAAAGACATTTGCCACCATGACTGGCCTAA...CAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CAA 90 bp | CCATGTGGAAGAGAAAAAGAGGACCATATCACTACATGCAGTAATTaGGACACATCTCAGAAACAATATCTTGTTGCCAATGGTACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PCGREKEDHITTCSN*DTSQKQYLVANGTH Trigger: GTGGGTACCATTGGCAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATGTAGTGATATGGTCCTCTTTTTCTCTTCCACATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CAA 90 bp | ATATCACTACATGCAGTAATTTGGACACATCTCAGAAACAATATCTaGTTGCCAATGGTACCCACACATTACATGTCCATGCATACACCA | + |
|
Preference number: 2 (lower is better) Translates to: ISLHAVIWTHLRNNI*LPMVPTHYMSMHTP Trigger: TGGTGTATGCATGGACATGTAATGTGTGGGTACCATTGGCAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATGTAGTGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACACAAACAAATGTTAAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCGATAAACCATGTTCGTaGTCTGAAAGGTTGACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: THKQMLKLPFMNSGVLGSDKPCS*SERLTS Trigger: TGAAGTCAACCTTTCAGATCACGAACATGGTTTATC...GCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATTTGTTTGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTATTGAAAATATTGAAGGCTGGCATGGTGGTGCACATATTTAATCTCATTTTAGGAGGCAGAGTTTaGGGCCAATCTGGTCTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ALLKILKAGMVVHIFNLILGGRV*GQSGLN Trigger: ATTTAGACCAGATTGGCCTCAAACTCTGCCTCCTAA...AATGAGATTAAATATGTGCACCACCATGCCAGCCTTCAATATTTTCAATAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGTTAAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGAACTCTGGAGTGCTTaGAAGCTAGTTATTTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NVKITLHELWSAWKLVILELWSA*KLVILA Trigger: GGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTC...CAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTATTGAAAATATTGAAGGCTGGCATGGTGGTGCACATATTTAATCTCATTGAACTCTGGAGTGCTTaGAAGCTAGTTATTTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ALLKILKAGMVVHIFNLIELWSA*KLVILA Trigger: GGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTC...AATGAGATTAAATATGTGCACCACCATGCCAGCCTTCAATATTTTCAATAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGTTAAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGTTTTCACTTCAGCTGTaGAAAAGTAAAGCAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: NVKITLHELWSAWKLVILFSLQL*KSKADS Trigger: TGAATCTGCTTTACTTTTGCACAGCTGAAGTGAAAA...CAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR GCA 72 bp | AGCGAGGCCCCAGGGCTGCCTGCAGGTTGTGGCAGGTaGCCAGGTCATAGCAGTGGTGACCCCGAGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SEAPGLPAGCGR*PGHSSGDPEPT Trigger: AGTGGGCTCGGGGTCACCACTGCTATGACCTGGGCACCTGCCACAACCTGCAGGCAGCCCTGGGGCCTCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | TGCCTGGATCCCACCACACCCTTCCAGGGCCAGAGGTaGCAGAGCCCTGGCCCATTGGGATCTCAGGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CLDPTTPFQGQR*QSPGPLGSQAF Trigger: GAAGGCCTGAGATCCCAATGGGCCAGGGCTCTGCCACCTCTGGCCCTGGAAGGGTGTGGTGGGATCCAGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | TCCCAGGTGGTCTGTCCCCGAAGCAGCAGCATCCCATaGAAAAGCAGCCCAGCACCACACAACAGTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SQVVCPRSSSIP*KSSPAPHNSAP Trigger: AGGTGCACTGTTGTGTGGTGCTGGGCTGCTTTTCCATGGGATGCTGCTGCTTCGGGGACAGACCACCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | GAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTaGCACTTTACTACCCTGCAGAGGGGCAGTCGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: EPSKDGGGQEPG*HFTTLQRGSRS Trigger: TGACCGACTGCCCCTCTGCAGGGTAGTAAAGTGCCAACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | AGCCCCCAAGGGACACAGCCTGAGACTCCTGTGGTCTaGTCTCTCTGTCCAGGCCTAAGATTGGGTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPQGTQPETPVV*SLCPGLRLGPF Trigger: AAAAGGACCCAATCTTAGGCCTGGACAGAGAGACCAGACCACAGGAGTCTCAGGCTGTGTCCCTTGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAAGCAGCCCAGCACCACACAACAGTGCACCTGCCACACACGTGTCCACCATAGAAGAGCCCACATaGGGCAGGTTCAAAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WKSSPAPHNSAPATHVSTIEEPT*GRFKEG Trigger: TCCTTCTTTGAACCTGCCCAATGTGGGCTCTTCTAT...GGTGGACACGTGTGTGGCAGGTGCACTGTTGTGTGGTGCTGGGCTGCTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | GTTCGATCCTCTGCCCTGTTCAGTTCTGGCTCTACCTaGACTCAGGAAGTCACAAGACCCACATCACCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VRSSALFSSGST*TQEVTRPTSPG Trigger: TCCAGGTGATGTGGGTCTTGTGACTTCCTGAGTCCAGGTAGAGCCAGAACTGAACAGGGCAGAGGATCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTCATGGTGGCAAATGTCTTTCATCCTAGCACTCAGAAAGGAGAAGCCAGTACGTCTGGACTCTCCTaGCCTGGATCCCACCACACC | + |
|
Preference number: 3 (lower is better) Translates to: PVMVANVFHPSTQKGEASTSGLS*PGSHHT Trigger: GGTGTGGTGGGATCCAGGCAAGGAGAGTCCAGACGT...ACTGGCTTCTCCTTTCTGAGTGCTAGGATGAAAGACATTTGCCACCATGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | ACACATGAAGGGGCAATCGGGCCTTCCTCCTGCGGCTaGCATGAAGCTAAAAAGTTCTCAGTTCGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: THEGAIGPSSCG*HEAKKFSVRSS Trigger: AGAGGATCGAACTGAGAACTTTTTAGCTTCATGCCAGCCGCAGGAGGAAGGCCCGATTGCCCCTTCATGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | ACTCAGGAAGTCACAAGACCCACATCACCTGGAGTCTaGAAAGAGATCCCATCTCCAGGCAAAGGAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TQEVTRPTSPGV*KEIPSPGKGEA Trigger: AGCCTCTCCTTTGCCTGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTTGTGACTTCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | TACCTGGACTCAGGAAGTCACAAGACCCACATCACCTaGAGTCTGGAAAGAGATCCCATCTCCAGGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YLDSGSHKTHIT*SLERDPISRQR Trigger: CCTTTGCCTGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTTGTGACTTCCTGAGTCCAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTGACTTCACAGACGCTTACTTTCTACAAGCTAACACGGTCTACTGGATCACGTCTGGACTCTCCTaGCCTGGATCCCACCACACC | + |
|
Preference number: 3 (lower is better) Translates to: KVDFTDAYFLQANTVYWITSGLS*PGSHHT Trigger: GGTGTGGTGGGATCCAGGCAAGGAGAGTCCAGACGT...GATCCAGTAGACCGTGTTAGCTTGTAGAAAGTAAGCGTCTGTGAAGTCAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR TCA 72 bp | ATTCAAAGACCAAAGACCAAAGACCAGGCCTCTCTGTaGAGGGTGTGCAAGGCCATCTACAGCCACAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IQRPKTKDQASL*RVCKAIYSHSR Trigger: TCTGCTGTGGCTGTAGATGGCCTTGCACACCCTTCACAGAGAGGCCTGGTCTTTGGTCTTTGGTCTTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTATAGGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTGGCACTTTACTGGACTTCCTTGAGTTaGAGGCCAGTAAGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: GIGTQQRWRRPRTRLALYWTSLS*RPVRST Trigger: TGTAGACCTTACTGGCCTCAAACTCAAGGAAGTCCA...GTAAAGTGCCAACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCCTATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR TCA 72 bp | CATGGGACCTGGGAAACAGCAACCAAAACAACAAAGTaGGGTATAGGAACCCAGCAAAGATGGAGGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HGTWETATKTTK*GIGTQQRWRRP Trigger: TGGCCTCCTCCATCTTTGCTGGGTTCCTATACCTCACTTTGTTGTTTTGGTTGCTGTTTCCCAGGTCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTCATGGTGGCAAATGTCTTTCATCCTAGCACTCAGAAAGGAGAAGCCAGTATAGAAGAGCCCACATaGGGCAGGTTCAAAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PVMVANVFHPSTQKGEASIEEPT*GRFKEG Trigger: TCCTTCTTTGAACCTGCCCAATGTGGGCTCTTCTAT...ACTGGCTTCTCCTTTCTGAGTGCTAGGATGAAAGACATTTGCCACCATGACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAGGTCTACATTTCTACCAGCAATCTTGTCACATGGCCTAGCAGGGCTTTTAGCCAGTGGACTTCCTaGAGTTTGAGGCCAGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKVYISTSNLVTWPSRAFSQWTS*SLRPVR Trigger: CCTTACTGGCCTCAAACTCAAGGAAGTCCACTGGCT...AAAAGCCCTGCTAGGCCATGTGACAAGATTGCTGGTAGAAATGTAGACCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATGTGGAAGAGAAAAAGAGGACCATATCACTACATGCAGTAATTTGGACACAAGGCCAAGAACCAGGTaGGCACTTTACTACCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PCGREKEDHITTCSNLDTRPRTR*ALYYPA Trigger: TGCAGGGTAGTAAAGTGCCAACCTGGTTCTTGGCCT...TGTGTCCAAATTACTGCATGTAGTGATATGGTCCTCTTTTTCTCTTCCACATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | GAAGGGTTCAAATCTAATCTCTTAGGCCAGTCATGGTaGCAAATGTCTTTCATCCTAGCACTCAGAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EGFKSNLLGQSW*QMSFILALRKE Trigger: CTCCTTTCTGAGTGCTAGGATGAAAGACATTTGCCACCATGACTGGCCTAAGAGATTAGATTTGAACCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | CTGGAAGGGTTCAAATCTAATCTCTTAGGCCAGTCATaGTGGCAAATGTCTTTCATCCTAGCACTCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LEGFKSNLLGQS*WQMSFILALRK Trigger: CTTTCTGAGTGCTAGGATGAAAGACATTTGCCACCATGACTGGCCTAAGAGATTAGATTTGAACCCTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGGCCCTGTGGAAGCTAGTTATTTaGGCCCTGATGTTCCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KITLHELWSAWKLVILALWKLVI*ALMFLF Trigger: AAAAAGGAACATCAGGGCCAAAATAACTAGCTTCCA...CAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | AGTAAGGTCTACATTTCTACCAGCAATCTTGTCACATaGCCTAGCAGGGCTTTTCTATTTCTTACAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SKVYISTSNLVT*PSRAFLFLTEQ Trigger: TTGTTCTGTAAGAAATAGAAAAGCCCTGCTAGGCCATGTGACAAGATTGCTGGTAGAAATGTAGACCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | TTTGGACACATCTCAGAAACAATATCTTGTTGCCAATaGTACCCACACATTACATGTCCATGCATACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: FGHISETISCCQ*YPHITCPCIHH Trigger: ATGGTGTATGCATGGACATGTAATGTGTGGGTACCATTGGCAACAAGATATTGTTTCTGAGATGTGTCCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR CCA 72 bp | ACACAAACAAATGTTAAAATTACCCTTCATGAACTCTaGAGTGCTTGGAAGCTAGTTATTTTGGCCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TQTNVKITLHEL*SAWKLVILALM Trigger: CATCAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATTTGTTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| 3UTR GCA 72 bp | CCATGTGGAAGAGAAAAAGAGGACCATATCACTACATaGAGTAATTTGGACACATCTCAGAAACAATATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PCGREKEDHITT*SNLDTSQKQYL Trigger: AAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATGTAGTGATATGGTCCTCTTTTTCTCTTCCACATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGGAGAGCCACTGTGTAGAGGGCTGAGTGGGCCTGCAGCAAGGCTGACACGCGGGCGCTCCTTCTaGGCCCCGAGCTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAGEPLCRGLSGPAARLTRGRSF*APSCPG Trigger: TCCTGGGCAGCTCGGGGCGCAGAAGGAGCGCCCGCG...TGTCAGCCTTGCTGCAGGCCCACTCAGCCCTCTACACAGTGGCTCTCCTGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAAGGCCAGAACCAGACTAGGGCCCAGCGAGGCCCCAGGGCTGCCTGCAGTAACCCCCGAATGCTaGGATCCGAGCGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEKARTRLGPSEAPGLPAVTPEC*DPSGGR Trigger: TCTTCCTCCGCTCGGATCCCAGCATTCGGGGGTTAC...TGCAGGCAGCCCTGGGGCCTCGCTGGGCCCTAGTCTGGTTCTGGCCTTTTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160014.2 |
||
| CDS-3UTR CCA 90 bp | CGGTCAGGCCAAGTAGCCCCCTTGCTAGACCATCCTCTGCCAAAAGGGCCAACTGAGCCCACTCCCAGGTaGTCTGTCCCCGAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSGQVAPLLDHPLPKGPTEPTPR*SVPEAA Trigger: TGCTGCTTCGGGGACAGACCACCTGGGAGTGGGCTC...AGTTGGCCCTTTTGGCAGAGGATGGTCTAGCAAGGGGGCTACTTGGCCTGACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGAGACACAGGAAGGGCCGGTAATTATGGAAGCCCACACAGCAGCCCAAGCAGCTAGCGCCAGTTaGAAGGCCCGGGCCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQETQEGPVIMEAHTAAQAASAS*KARASG Trigger: ACCACTGGCCCGGGCCTTGCAACTGGCGCTAGCTGC...TTGGGCTGCTGTGTGGGCTTCCATAATTACCGGCCCTTCCTGTGTCTCCTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGACCAAAGACCAGGCCTCTCTGTGAAGGGTGTGCAAGGCCATCTACAGCCCACTGTGTAGAGGGCTaGGTGGGCCTGCAGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRPKTRPLCEGCARPSTAHCVEG*VGLQQG Trigger: GCCTTGCTGCAGGCCCACTCAGCCCTCTACACAGTG...GGCTGTAGATGGCCTTGCACACCCTTCACAGAGAGGCCTGGTCTTTGGTCTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACCAAAACAACAAAGTGAGGTATAGGAACCCAGCAAAGATGGAGGAGGCCCGCGGGCGCTCCTTCTaGGCCCCGAGCTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNQNNKVRYRNPAKMEEARGRSF*APSCPG Trigger: TCCTGGGCAGCTCGGGGCGCAGAAGGAGCGCCCGCG...GGCCTCCTCCATCTTTGCTGGGTTCCTATACCTCACTTTGTTGTTTTGGTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAGCACGTCTGGACTCTCCTTGCCTGGATCCCACCACACCCTTCCAGGGCAGCAGCAGCATCCCATaGAAAAGCAGCCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRARLDSPCLDPTTPFQGSSSIP*KSSPAP Trigger: TGGTGCTGGGCTGCTTTTCCATGGGATGCTGCTGCT...GCCCTGGAAGGGTGTGGTGGGATCCAGGCAAGGAGAGTCCAGACGTGCTCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGACCAAAGACCAGGCCTCTCTGTGAAGGGTGTGCAAGGCCATCTACAGCCGGTCACGACGTAGGATaGACACACGGCAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRPKTRPLCEGCARPSTAGHDVG*THGRQS Trigger: GCTCTGCCTGCCGTGTGTGCATCCTACGTCGTGACC...GGCTGTAGATGGCCTTGCACACCCTTCACAGAGAGGCCTGGTCTTTGGTCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
||
| 3UTR CAA 72 bp | GGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTaGGCACTTTACTACCCTGCAGAGGGGCAGTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQQRWRRPRTR*ALYYPAEGQSV Trigger: GACCGACTGCCCCTCTGCAGGGTAGTAAAGTGCCAACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| CDS-3UTR GCA 90 bp | TGGACTTCCTTGAGTTTGAGGCCAGTAAGGTCTACATTTCTACCAGCAATCTTGGGCCCCAGGGCTGCCTaGAGGTTGTGGCAGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WTSLSLRPVRSTFLPAILGPRAA*RLWQVP Trigger: GGGCACCTGCCACAACCTGCAGGCAGCCCTGGGGCC...CAAGATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAAACTCAAGGAAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTGAGGTATAGGAACCCAGCAAAGATGGAGGAGGCCAAGAACCAGGTTGGCGCAGGTTGTGGCAGGTaGCCAGGTCATAGCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVRYRNPAKMEEAKNQVGAGCGR*PGHSSG Trigger: ACCACTGCTATGACCTGGGCACCTGCCACAACCTGC...GCCAACCTGGTTCTTGGCCTCCTCCATCTTTGCTGGGTTCCTATACCTCACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGACATGGGACCTGGGAAACAGCAACCAAAACAACAAAGTGAGGTATAGGAAGGCCAGGGCAAACTaGGCCAGAGACACTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLTWDLGNSNQNNKVRYRKARAN*ARDTLP Trigger: AGGCAAAGTGTCTCTGGCCCAGTTTGCCCTGGCCTT...CCTATACCTCACTTTGTTGTTTTGGTTGCTGTTTCCCAGGTCCCATGTCAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
||
| CDS-3UTR GCA 90 bp | ACCATATCACTACATGCAGTAATTTGGACACATCTCAGAAACAATATCTTGTTGCGCGGGCGCTCCTTCTaGGCCCCGAGCTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TISLHAVIWTHLRNNILLRGRSF*APSCPG Trigger: TCCTGGGCAGCTCGGGGCGCAGAAGGAGCGCCCGCG...CAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATGTAGTGATATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCATGGTGGCAAATGTCTTTCATCCTAGCACTCAGAAAGGAGAAGCCAGTAGCAGCACTGAGATGTaGAGCAGGACACCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVMVANVFHPSTQKGEASSSTEM*SRTPAE Trigger: CTCTGCTGGTGTCCTGCTCCACATCTCAGTGCTGCT...ACTGGCTTCTCCTTTCTGAGTGCTAGGATGAAAGACATTTGCCACCATGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| 3UTR CAA 72 bp | CCAAAAGGGCCAACTACAGAGATAGAAGAGCCCACATaGGGCAGGTTCAAAGAAGGAGCTAAAGCTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PKGPTTEIEEPT*GRFKEGAKAAH Trigger: GTGGGCAGCTTTAGCTCCTTCTTTGAACCTGCCCAATGTGGGCTCTTCTATCTCTGTAGTTGGCCCTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| CDS-3UTR TCA 90 bp | CTACATGCAGTAATTTGGACACATCTCAGAAACAATATCTTGTTGCCAATGGTACGGCAGGCAGAGCAGTaGCCACTACGAGGTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LHAVIWTHLRNNILLPMVRQAEQ*PLRGGT Trigger: GGTGCCACCTCGTAGTGGTCACTGCTCTGCCTGCCG...TACCATTGGCAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| CDS-3UTR GCA 90 bp | ACCATATCACTACATGCAGTAATTTGGACACATCTCAGAAACAATATCTTGTTGGCAGCTAGCGCCAGTTaGAAGGCCCGGGCCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: TISLHAVIWTHLRNNILLAASAS*KARASG Trigger: ACCACTGGCCCGGGCCTTGCAACTGGCGCTAGCTGC...CAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATGTAGTGATATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| CDS-3UTR CCA 90 bp | AGTAAGGTCTACATTTCTACCAGCAATCTTGTCACATGGCCTAGCAGGGCTTTTAAGACCCACATCACCTaGAGTCTGGAAAGAGATCCC | + |
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Preference number: 4 (lower is better) Translates to: SKVYISTSNLVTWPSRAFKTHIT*SLERDP Trigger: GGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTT...AAAAGCCCTGCTAGGCCATGTGACAAGATTGCTGGTAGAAATGTAGACCTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| 3UTR CAA 72 bp | CACTCAGAAAGGAGAAGCCAGTGGACTTCCTTGAGTTaGAGGCCAGTAAGGTCTACATTTCTACCAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: HSERRSQWTSLS*RPVRSTFLPAI Trigger: GATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAAACTCAAGGAAGTCCACTGGCTTCTCCTTTCTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| CDS-3UTR CCA 90 bp | GTGGACTTCCTTGAGTTTGAGGCCAGTAAGGTCTACATTTCTACCAGCAATCTTACATCACCTGGAGTCTaGAAAGAGATCCCATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VDFLEFEASKVYISTSNLTSPGV*KEIPSP Trigger: TGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGT...AAGATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAAACTCAAGGAAGTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| 3UTR CAA 72 bp | CTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTaGGCCCTGATGTTCCTTTTTCACTTCAGCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LHELWSAWKLVI*ALMFLFHFSCA Trigger: TGCACAGCTGAAGTGAAAAAGGAACATCAGGGCCAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CAA 72 bp | TTGAGGCCAGTAAGGTCTACATTTCTACCAGCAATCTaGTCACATGGCCTAGCAGGGCTTTTCTATTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LRPVRSTFLPAI*SHGLAGLFYFL Trigger: TAAGAAATAGAAAAGCCCTGCTAGGCCATGTGACAAGATTGCTGGTAGAAATGTAGACCTTACTGGCCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CAA 72 bp | GCAGTAATTTGGACACATCTCAGAAACAATATCTTGTaGCCAATGGTACCCACACATTACATGTCCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: AVIWTHLRNNIL*PMVPTHYMSMH Trigger: ATGCATGGACATGTAATGTGTGGGTACCATTGGCAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CAA 72 bp | CATGCAGTAATTTGGACACATCTCAGAAACAATATCTaGTTGCCAATGGTACCCACACATTACATGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: HAVIWTHLRNNI*LPMVPTHYMSM Trigger: CATGGACATGTAATGTGTGGGTACCATTGGCAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| 3UTR CAA 72 bp | AGAGAAAAAGAGGACCATATCACTACATGCAGTAATTaGGACACATCTCAGAAACAATATCTTGTTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: REKEDHITTCSN*DTSQKQYLVAN Trigger: ATTGGCAACAAGATATTGTTTCTGAGATGTGTCCAAATTACTGCATGTAGTGATATGGTCCTCTTTTTCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| CDS CCA 90 bp | CAGCTCCAGGACCACGACGGCGGCCCACAGCGCGGTGAGTACCAGTaGCATCCGCGCGGGCGCTCCTTCTGCGCCCCGAGCTGCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QLQDHDGGPQRGEYQ*HPRGRSFCAPSCPG Trigger: TCCTGGGCAGCTCGGGGCGCAGAAGGAGCGCCCGCGCGGATGCCACTGGTACTCACCGCGCTGTGGGCCGCCGTCGTGGTCCTGGAGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006632.8 ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS TCA 90 bp | TCACGTAGGCCAGCTCCAGGACCACGACGGCGGCCCACAGCGCGGTaGGTACCAGTGGCATCCGCGCGGGCGCTCCTTCTGCGCCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: SRRPAPGPRRRPTAR*VPVASARALLLRPE Trigger: CTCGGGGCGCAGAAGGAGCGCCCGCGCGGATGCCACTGGTACTCACCGCGCTGTGGGCCGCCGTCGTGGTCCTGGAGCTGGCCTACGTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006632.8 ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS TCA 90 bp | TGCTGGGATCCGAGCGGAGGAAGAGCACCACGTTGCCCAGCAGATTaGGCAGCTGATAAGCAGCTAGCGCCAGTTGCAAGGCCCGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CWDPSGGRAPRCPAD*AADKQLAPVARPGP Trigger: TGGCCCGGGCCTTGCAACTGGCGCTAGCTGCTTATCAGCTGCTCAATCTGCTGGGCAACGTGGTGCTCTTCCTCCGCTCGGATCCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006632.8 ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS GCA 90 bp | CCACACAGCAGCCCAATAGGCGACAGTGATGGTCACGACGTAGGATaGACACACGGCAGGCAGAGCAGTGACCACTACGAGGTGGCACCT | + |
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Preference number: 5 (lower is better) Translates to: PHSSPIGDSDGHDVG*THGRQSSDHYEVAP Trigger: AGGTGCCACCTCGTAGTGGTCACTGCTCTGCCTGCCGTGTGTGCATCCTACGTCGTGACCATCACTGTCGCCTATTGGGCTGCTGTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| CDS-3UTR CAA 90 bp | GGCAGTCGGTCAGGCCAAGTAGCCCCCTTGCTAGACCATCCTCTGCCAAAAGGGAGGTGGCACCTGGCTTaGGCACTGGTAACAGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: GSRSGQVAPLLDHPLPKGRWHLA*ALVTVS Trigger: GCTTACTGTTACCAGTGCCAAAGCCAGGTGCCACCT...CCCTTTTGGCAGAGGATGGTCTAGCAAGGGGGCTACTTGGCCTGACCGACTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| CDS-3UTR CAA 90 bp | ACAAGACCCACATCACCTGGAGTCTGGAAAGAGATCCCATCTCCAGGCAAAGGAAGGAAGAGCACCACGTaGCCCAGCAGATTGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TRPTSPGVWKEIPSPGKGRKSTT*PSRLSS Trigger: GCTGCTCAATCTGCTGGGCAACGTGGTGCTCTTCCT...TCCTTTGCCTGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS-3UTR CAA 90 bp | AGTCACAAGACCCACATCACCTGGAGTCTGGAAAGAGATCCCATCTCCAGGCAAAGGTGGCACCTGGCTTaGGCACTGGTAACAGTAACC | + |
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Preference number: 5 (lower is better) Translates to: SHKTHITWSLERDPISRQRWHLA*ALVTVT Trigger: GGTTACTGTTACCAGTGCCAAAGCCAGGTGCCACCT...TTGCCTGGAGATGGGATCTCTTTCCAGACTCCAGGTGATGTGGGTCTTGTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS-3UTR CAA 90 bp | TCTCCATGTGGAAGAGAAAAAGAGGACCATATCACTACATGCAGTAATTTGGACAGGAAGAGCACCACGTaGCCCAGCAGATTGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SPCGREKEDHITTCSNLDRKSTT*PSRLSS Trigger: GCTGCTCAATCTGCTGGGCAACGTGGTGCTCTTCCT...GTCCAAATTACTGCATGTAGTGATATGGTCCTCTTTTTCTCTTCCACATGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| CDS-3UTR CAA 90 bp | AATGTTAAAATTACCCTTCATGAACTCTGGAGTGCTTGGAAGCTAGTTATTTTGAGGAAGAGCACCACGTaGCCCAGCAGATTGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: NVKITLHELWSAWKLVILRKSTT*PSRLSS Trigger: GCTGCTCAATCTGCTGGGCAACGTGGTGCTCTTCCT...CAAAATAACTAGCTTCCAAGCACTCCAGAGTTCATGAAGGGTAATTTTAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006632.8 ENSMUST00000162720.8 |
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| CDS CCA 72 bp | GACCACGACGGCGGCCCACAGCGCGGTGAGTACCAGTaGCATCCGCGCGGGCGCTCCTTCTGCGCCCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: DHDGGPQRGEYQ*HPRGRSFCAPS Trigger: GCTCGGGGCGCAGAAGGAGCGCCCGCGCGGATGCCACTGGTACTCACCGCGCTGTGGGCCGCCGTCGTGGTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006632.8 ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS TCA 72 bp | CCAGCTCCAGGACCACGACGGCGGCCCACAGCGCGGTaGGTACCAGTGGCATCCGCGCGGGCGCTCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PAPGPRRRPTAR*VPVASARALLL Trigger: CAGAAGGAGCGCCCGCGCGGATGCCACTGGTACTCACCGCGCTGTGGGCCGCCGTCGTGGTCCTGGAGCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006632.8 ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS CCA 72 bp | CAGTTGCAAGGCCCGGGCCAGTGGTCCCAGCGGGGGTaGCCCAGGCCCCAGCACCATCACGTAGGCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QLQGPGQWSQRG*PRPQHHHVGQL Trigger: GAGCTGGCCTACGTGATGGTGCTGGGGCCTGGGCCACCCCCGCTGGGACCACTGGCCCGGGCCTTGCAACTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006632.8 ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS TCA 72 bp | TCACGACGTAGGATGCACACACGGCAGGCAGAGCAGTaGCCACTACGAGGTGGCACCTGGCTTTGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SRRRMHTRQAEQ*PLRGGTWLWHW Trigger: CCAGTGCCAAAGCCAGGTGCCACCTCGTAGTGGTCACTGCTCTGCCTGCCGTGTGTGCATCCTACGTCGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| CDS CAA 72 bp | GGCAGAGCAGTGACCACTACGAGGTGGCACCTGGCTTaGGCACTGGTAACAGTAAGCCCAGCCCTGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRAVTTTRWHLA*ALVTVSPALSQ Trigger: CTGGGACAGGGCTGGGCTTACTGTTACCAGTGCCAAAGCCAGGTGCCACCTCGTAGTGGTCACTGCTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| CDS TCA 72 bp | CCGAGCGGAGGAAGAGCACCACGTTGCCCAGCAGATTaGGCAGCTGATAAGCAGCTAGCGCCAGTTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PSGGRAPRCPAD*AADKQLAPVAR Trigger: CCTTGCAACTGGCGCTAGCTGCTTATCAGCTGCTCAATCTGCTGGGCAACGTGGTGCTCTTCCTCCGCTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006632.8 ENSMUST00000160014.2 ENSMUST00000162720.8 |
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| CDS CCA 72 bp | GCACACACGGCAGGCAGAGCAGTGACCACTACGAGGTaGCACCTGGCTTTGGCACTGGTAACAGTAAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: AHTAGRAVTTTR*HLALALVTVSP Trigger: TGGGCTTACTGTTACCAGTGCCAAAGCCAGGTGCCACCTCGTAGTGGTCACTGCTCTGCCTGCCGTGTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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| CDS CCA 72 bp | CTGGCTTTGGCACTGGTAACAGTAACCCCCGAATGCTaGGATCCGAGCGGAGGAAGAGCACCACGTTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LALALVTVTPEC*DPSGGRAPRCP Trigger: TGGGCAACGTGGTGCTCTTCCTCCGCTCGGATCCCAGCATTCGGGGGTTACTGTTACCAGTGCCAAAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160014.2 |
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| CDS GCA 72 bp | AGCCCAATAGGCGACAGTGATGGTCACGACGTAGGATaGACACACGGCAGGCAGAGCAGTGACCACTACGAG | + |
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Preference number: 6 (lower is better) Translates to: SPIGDSDGHDVG*THGRQSSDHYE Trigger: CTCGTAGTGGTCACTGCTCTGCCTGCCGTGTGTGCATCCTACGTCGTGACCATCACTGTCGCCTATTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006632.8 |
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