RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC23 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036304

Ensembl transcript IDs: ENSMUST00000036321.14, ENSMUST00000165648.2, ENSMUST00000231700.2, ENSMUST00000232055.2

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCTGCTTCGGTCCCCGGGATTTCCTGATGCCGGATTCCTTTGAGTaGTTGACTGGGCTGGAGTGTTTCCACATCCCTCCTCAGGTGGCC +
Preference number: 1 (lower is better)
Translates to: VCFGPRDFLMPDSFE*LTGLECFHIPPQVA
Trigger: GGCCACCTGAGGAGGGATGTGGAAACACTCCAGCCCAGTCAAGCACTCAAAGGAATCCGGCATCAGGAAATCCCGGGGACCGAAGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp GAGTGTTTCCACATCCCTCCTCAGGTGGCCATCATGGCTGCTCCATaGGGTAGCCAGGCAGCAGAAGCCCCCATACAGATGAACCTGAGA +
Preference number: 1 (lower is better)
Translates to: ECFHIPPQVAIMAAP*GSQAAEAPIQMNLR
Trigger: TCTCAGGTTCATCTGTATGGGGGCTTCTGCTGCCTGGCTACCTCATGGAGCAGCCATGATGGCCACCTGAGGAGGGATGTGGAAACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp GAGAGCCATGTGCTCTGCTCACCATTCAGCCTGCTGTTCCTACAGTaGAATGCTCAGAGCCAGCTCACAGCAACAGGACTCAGTCTGGCC +
Preference number: 1 (lower is better)
Translates to: ESHVLCSPFSLLFLQ*NAQSQLTATGLSLA
Trigger: GGCCAGACTGAGTCCTGTTGCTGTGAGCTGGCTCTGAGCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 90 bp AAGCCCAATGTGGCGAGAGCCATGTGCTCTGCTCACCATTCAGCCTaGTGTTCCTACAGTGGAATGCTCAGAGCCAGCTCACAGCAACAG +
Preference number: 1 (lower is better)
Translates to: KPNVARAMCSAHHSA*CSYSGMLRASSQQQ
Trigger: CTGTTGCTGTGAGCTGGCTCTGAGCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCGCCACATTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp TCTCCAGTCCTCTCTCCAAACCTGAGTATAGCCCTCCAGTCCCTCTaGGAAGTGGGCGGTGGAAATGAATCCTGCATGGACACTGACGTG +
Preference number: 1 (lower is better)
Translates to: SPVLSPNLSIALQSL*EVGGGNESCMDTDV
Trigger: CACGTCAGTGTCCATGCAGGATTCATTTCCACCGCCCACTTCTCAGAGGGACTGGAGGGCTATACTCAGGTTTGGAGAGAGGACTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 90 bp TACATGAATGGTTTGAGTGAGCCACAGCCTCTGTGCAGCATCTGGTaGCTGAGTCAGCAAGGTGACAGGAAGGAATGGCTCTGTCTCGCG +
Preference number: 1 (lower is better)
Translates to: YMNGLSEPQPLCSIW*LSQQGDRKEWLCLA
Trigger: CGCGAGACAGAGCCATTCCTTCCTGTCACCTTGCTGACTCAGGCACCAGATGCTGCACAGAGGCTGTGGCTCACTCAAACCATTCATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp GCGACACCAGGACATCTCCACTACTTAGAAGTCTCAAGCCCAATGTaGCGAGAGCCATGTGCTCTGCTCACCATTCAGCCTGCTGTTCCT +
Preference number: 1 (lower is better)
Translates to: ATPGHLHYLEVSSPM*REPCALLTIQPAVP
Trigger: AGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCGCCACATTGGGCTTGAGACTTCTAAGTAGTGGAGATGTCCTGGTGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp TGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTaGCTCATGGCTGCTTATAACTCCAGCTCCAGGGGAGGTTTTCTG +
Preference number: 1 (lower is better)
Translates to: CSSRGPSSVLSAQDS*LMAAYNSSSRGGFL
Trigger: CAGAAAACCTCCCCTGGAGCTGGAGTTATAAGCAGCCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp ACTTACATGAATGGTTTGAGTGAGCCACAGCCTCTGTGCAGCATCTaGTGCCTGAGTCAGCAAGGTGACAGGAAGGAATGGCTCTGTCTC +
Preference number: 1 (lower is better)
Translates to: TYMNGLSEPQPLCSI*CLSQQGDRKEWLCL
Trigger: GAGACAGAGCCATTCCTTCCTGTCACCTTGCTGACTCAGGCACCAGATGCTGCACAGAGGCTGTGGCTCACTCAAACCATTCATGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp TACAGTGGAATGCTCAGAGCCAGCTCACAGCAACAGGACTCAGTCTaGCCGCTGCTTCTGGACAGTTCCATGAATCTCAGCAAACACTCA +
Preference number: 1 (lower is better)
Translates to: YSGMLRASSQQQDSV*PLLLDSSMNLSKHS
Trigger: TGAGTGTTTGCTGAGATTCATGGAACTGTCCAGAAGCAGCGGCCAGACTGAGTCCTGTTGCTGTGAGCTGGCTCTGAGCATTCCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 90 bp TTCCCACCACACGGCCTCTGCGTGTTTAACATGAAACAGTTCACCTaGAAAGTTACGCTGAGCAAACCAGGCTTCAAGCAGCACAACTCG +
Preference number: 1 (lower is better)
Translates to: FPPHGLCVFNMKQFT*KVTLSKPGFKQHNS
Trigger: CGAGTTGTGCTGCTTGAAGCCTGGTTTGCTCAGCGTAACTTTGCAGGTGAACTGTTTCATGTTAAACACGCAGAGGCCGTGTGGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 90 bp CAGTTGCCTTCCAGGCAGGCGGTACAGTGGACAACAAACAGTCAGTaGATTCATCAGAGGAAAATGCCACTGGGAGAGCAGAGATTTACA +
Preference number: 1 (lower is better)
Translates to: QLPSRQAVQWTTNSQ*IHQRKMPLGEQRFT
Trigger: TGTAAATCTCTGCTCTCCCAGTGGCATTTTCCTCTGATGAATGCACTGACTGTTTGTTGTCCACTGTACCGCCTGCCTGGAAGGCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp CTTAGATGTAGGACAAGAGGACCTGCTTATCTGGAGTCACTTTGGTaGGGAGTTCTTGCTCCCATGGTCAAGGGACTGCTAGCTTATCCA +
Preference number: 1 (lower is better)
Translates to: LRCRTRGPAYLESLW*GVLAPMVKGLLAYP
Trigger: TGGATAAGCTAGCAGTCCCTTGACCATGGGAGCAAGAACTCCCCACCAAAGTGACTCCAGATAAGCAGGTCCTCTTGTCCTACATCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp CACAGCAACAGGACTCAGTCTGGCCGCTGCTTCTGGACAGTTCCATaGATCTCAGCAAACACTCACAAGAACACACTGAGTTTCATTTGG +
Preference number: 1 (lower is better)
Translates to: HSNRTQSGRCFWTVP*ISANTHKNTLSFIW
Trigger: CCAAATGAAACTCAGTGTGTTCTTGTGAGTGTTTGCTGAGATTCATGGAACTGTCCAGAAGCAGCGGCCAGACTGAGTCCTGTTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp AAGCTTAGATGTAGGACAAGAGGACCTGCTTATCTGGAGTCACTTTaGTGGGGAGTTCTTGCTCCCATGGTCAAGGGACTGCTAGCTTAT +
Preference number: 1 (lower is better)
Translates to: KLRCRTRGPAYLESL*WGVLAPMVKGLLAY
Trigger: ATAAGCTAGCAGTCCCTTGACCATGGGAGCAAGAACTCCCCACCAAAGTGACTCCAGATAAGCAGGTCCTCTTGTCCTACATCTAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp TTAATTCCTGTGAGCCACAAAGCCAACAAGGAATCCCTGTCCATTTaGGGGAAACTGAGTGGCCTCATTCATGTGACCCTTGAGTGGCAA +
Preference number: 1 (lower is better)
Translates to: LIPVSHKANKESLSI*GKLSGLIHVTLEWQ
Trigger: TTGCCACTCAAGGGTCACATGAATGAGGCCACTCAGTTTCCCTCAAATGGACAGGGATTCCTTGTTGGCTTTGTGGCTCACAGGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 90 bp GATGGAGTTTTCCTCCTGTTTCTATGGCAGAATGAGGGCCCAATCTaGAGACTTCTCCAAGTTTCAGTTCTGAGACACAAAGGAATCATC +
Preference number: 1 (lower is better)
Translates to: DGVFLLFLWQNEGPI*RLLQVSVLRHKGII
Trigger: GATGATTCCTTTGTGTCTCAGAACTGAAACTTGGAGAAGTCTGCAGATTGGGCCCTCATTCTGCCATAGAAACAGGAGGAAAACTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp AGGAATTCCTCCTTCCTTCCAGTCTTCATCCCTAGTGTTTGCCCTTaGGTTTTTCAGAAGCAAGCTCTGTCTTCTTTCCTGGGAATATAC +
Preference number: 1 (lower is better)
Translates to: RNSSFLPVFIPSVCP*VFQKQALSSFLGIY
Trigger: GTATATTCCCAGGAAAGAAGACAGAGCTTGCTTCTGAAAAACTCAAGGGCAAACACTAGGGATGAAGACTGGAAGGAAGGAGGAATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp GCTTGTTTGAGAAGTGTCCTTTTCGAAAGGCAGGGTACCAAAATATaGCTAACGGGAAGTTCCGTCACAGAAATCTACTCGGCTAGTTTA +
Preference number: 1 (lower is better)
Translates to: ACLRSVLFERQGTKI*LTGSSVTEIYSASL
Trigger: TAAACTAGCCGAGTAGATTTCTGTGACGGAACTTCCCGTTAGCCATATTTTGGTACCCTGCCTTTCGAAAAGGACACTTCTCAAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp GAGTTTTTCAGAAGCAAGCTCTGTCTTCTTTCCTGGGAATATACATaGCAGTATGGCAGTAACATAAAGGATGGGAACAGGGAGGGATCT +
Preference number: 1 (lower is better)
Translates to: EFFRSKLCLLSWEYT*QYGSNIKDGNREGS
Trigger: AGATCCCTCCCTGTTCCCATCCTTTATGTTACTGCCATACTGTCATGTATATTCCCAGGAAAGAAGACAGAGCTTGCTTCTGAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp AGTGGACAACAAACAGTCAGTGCATTCATCAGAGGAAAATGCCACTaGGAGAGCAGAGATTTACAATATCCTAGCAACTATGTGGTTGAG +
Preference number: 1 (lower is better)
Translates to: SGQQTVSAFIRGKCH*ESRDLQYPSNYVVE
Trigger: CTCAACCACATAGTTGCTAGGATATTGTAAATCTCTGCTCTCCCAGTGGCATTTTCCTCTGATGAATGCACTGACTGTTTGTTGTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp ACAACGACAGAAAATAGTTGTATCCACGCCAACTCTCATTCTAAATaGATGTCTGAATCTAGACCAGGGACAGGCATTGCCGTAGAAACT +
Preference number: 1 (lower is better)
Translates to: TTTENSCIHANSHSK*MSESRPGTGIAVET
Trigger: AGTTTCTACGGCAATGCCTGTCCCTGGTCTAGATTCAGACATTCATTTAGAATGAGAGTTGGCGTGGATACAACTATTTTCTGTCGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp TCTGGACAGTTCCATGAATCTCAGCAAACACTCACAAGAACACACTaGGTTTCATTTGGTGTTCAGTTTAGTCAGCATGGCTTTCATTCC +
Preference number: 1 (lower is better)
Translates to: SGQFHESQQTLTRTH*VSFGVQFSQHGFHS
Trigger: GGAATGAAAGCCATGCTGACTAAACTGAACACCAAATGAAACTCAGTGTGTTCTTGTGAGTGTTTGCTGAGATTCATGGAACTGTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 90 bp GAACAGCAACCAACAAGAAACCCACAAAGTACTGTTTCTCCTCTATaGAGCAACAAGGCCAAGGCAAATTTAAGGTCTCACAGATTATCT +
Preference number: 1 (lower is better)
Translates to: EQQPTRNPQSTVSPL*SNKAKANLRSHRLS
Trigger: AGATAATCTGTGAGACCTTAAATTTGCCTTGGCCTTGTTGCTTCATAGAGGAGAAACAGTACTTTGTGGGTTTCTTGTTGGTTGCTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp GAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTaGAATTGTGTTTTCTGGCAGTGGGAAGTTCTTGAATACAAAGTT +
Preference number: 1 (lower is better)
Translates to: EGSQAGRYQYYIDSY*NCVFWQWEVLEYKV
Trigger: AACTTTGTATTCAAGAACTTCCCACTGCCAGAAAACACAATTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 90 bp CTATCCGATTTCTGTAAATTTTCTCAGCAGTTAGACATTCAAAGTTaGCTATGTACCTGGCATTCAAGAGACATGAAAACTACCAATTTC +
Preference number: 1 (lower is better)
Translates to: LSDFCKFSQQLDIQS*LCTWHSRDMKTTNF
Trigger: GAAATTGGTAGTTTTCATGTCTCTTGAATGCCAGGTACATAGCCAACTTTGAATGTCTAACTGCTGAGAAAATTTACAGAAATCGGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp CAGGCGGTCTGCTTCGGTCCCCGGGATTTCCTGATGCCGGATTCCTTTGAGTGCCTGTGCAGCATCTGGTaGCTGAGTCAGCAAGGTGAC +
Preference number: 2 (lower is better)
Translates to: QAVCFGPRDFLMPDSFECLCSIW*LSQQGD
Trigger: GTCACCTTGCTGACTCAGGCACCAGATGCTGCACAG...GCACTCAAAGGAATCCGGCATCAGGAAATCCCGGGGACCGAAGCAGACCGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp GCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACTCATGGGCCCTCCAGTCCCTCTaGGAAGTGGGCGGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: ALPEDQVQFSVPRIADSWALQSL*EVGGGN
Trigger: ATTTCCACCGCCCACTTCTCAGAGGGACTGGAGGGC...CCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp GCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACTCATGGCCTGAGTCAGCAAGGTaGCAGGAAGGAATGGCTCTG +
Preference number: 2 (lower is better)
Translates to: ALPEDQVQFSVPRIADSWPESAR*QEGMAL
Trigger: CAGAGCCATTCCTTCCTGTCACCTTGCTGACTCAGG...CCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp CGAGAGCCATGTGCTCTGCTCACCATTCAGCCTGCTGTTCCTACAGTGGAATGCGAATCCCTGTCCATTTaGGGGAAACTGAGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: REPCALLTIQPAVPTVECESLSI*GKLSGL
Trigger: GAGGCCACTCAGTTTCCCTCAAATGGACAGGGATTC...GCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACAGAGCTGGAAAGCAATaGTCTGTTCCATACTGGGGA +
Preference number: 2 (lower is better)
Translates to: RAALPEDQVQFSVPRIADRAGKQ*SVPYWG
Trigger: TCCCCAGTATGGAACAGAGCATTGCTTTCCAGCTCT...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACGTCATTGCTAACCTGTaGGAACAAAGTCTAACACGG +
Preference number: 2 (lower is better)
Translates to: RAALPEDQVQFSVPRIADVIANL*EQSLTR
Trigger: CCGTGTTAGACTTTGTTCTCACAGGTTAGCAATGAC...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACAATGAGGGCCCAATCTaGAGACTTCTCCAAGTTTCA +
Preference number: 2 (lower is better)
Translates to: RAALPEDQVQFSVPRIADNEGPI*RLLQVS
Trigger: TGAAACTTGGAGAAGTCTGCAGATTGGGCCCTCATT...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACAAAGGCAGAAGAAAATaGCCCTTTCTCCAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: RAALPEDQVQFSVPRIADKGRRK*PFLQSS
Trigger: AGAGGACTGGAGAAAGGGCCATTTTCTTCTGCCTTT...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 90 bp TTAGAGTACCAAGGAGTATTGCGTAAGAGAGCAAGCTTACAGCAGTaGCCTTCCAGGCAGGCGGTACAGTGGACAACAAACAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: LEYQGVLRKRASLQQ*PSRQAVQWTTNSQC
Trigger: GCACTGACTGTTTGTTGTCCACTGTACCGCCTGCCTGGAAGGCAACTGCTGTAAGCTTGCTCTCTTACGCAATACTCCTTGGTACTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 90 bp GAAATGCCCCGAGTTCTAACTAACATCCTTACTTACATGAATGGTTaGAGTGAGCCACAGCCTCTGTGCAGCATCTGGTGCCTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: EMPRVLTNILTYMNG*SEPQPLCSIWCLSQ
Trigger: CTGACTCAGGCACCAGATGCTGCACAGAGGCTGTGGCTCACTCAAACCATTCATGTAAGTAAGGATGTTAGTTAGAACTCGGGGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 90 bp GAGCAAACCAGGCTTCAAGCAGCACAACTCGAACCCGCTGCTTGTTaGAGAAGTGTCCTTTTCGAAAGGCAGGGTACCAAAATATGGCTA +
Preference number: 2 (lower is better)
Translates to: EQTRLQAAQLEPAAC*RSVLFERQGTKIWL
Trigger: TAGCCATATTTTGGTACCCTGCCTTTCGAAAAGGACACTTCTCAAACAAGCAGCGGGTTCGAGTTGTGCTGCTTGAAGCCTGGTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp GCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACTCATGGCACATACGCTGTCTTTaGCATTACTACCATCTCTCT +
Preference number: 2 (lower is better)
Translates to: ALPEDQVQFSVPRIADSWHIRCL*HYYHLS
Trigger: AGAGAGATGGTAGTAATGTCAAAGACAGCGTATGTG...CCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp TCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAGGCGTTAGGAGCACGTGCTaGTCTTCCAGAGGACCAAGT +
Preference number: 2 (lower is better)
Translates to: SQDSLTLPSDTEIGSRKGVRSTC*SSRGPS
Trigger: ACTTGGTCCTCTGGAAGAGCAGCACGTGCTCCTAAC...GCCTTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp CATTCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAGTGGCGAGAGCCATGTaGTCTGCTCACCATTCAGCC +
Preference number: 2 (lower is better)
Translates to: HSQDSLTLPSDTEIGSRKVARAM*SAHHSA
Trigger: GGCTGAATGGTGAGCAGAGCACATGGCTCTCGCCAC...TTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp CGAGAGCCATGTGCTCTGCTCACCATTCAGCCTGCTGTTCCTACAGTGGAATGCTACCGAGGGGTCATATaGCTATTAAGAATTGAAAGG +
Preference number: 2 (lower is better)
Translates to: REPCALLTIQPAVPTVECYRGVI*LLRIER
Trigger: CCTTTCAATTCTTAATAGCCATATGACCCCTCGGTA...GCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp TCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAGGCTCTTCAGGAGAGCCCTaGTTAATGGCAAGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: SQDSLTLPSDTEIGSRKGSSGEP*LMASLR
Trigger: CCTGAGACTTGCCATTAACCAGGGCTCTCCTGAAGA...GCCTTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp CTGGCCTCCCCTATACACACACACACACACACACACACACACACACACACACACAGTTGGCTATGTACCTaGCATTCAAGAGACATGAAA +
Preference number: 2 (lower is better)
Translates to: LASPIHTHTHTHTHTHTHSWLCT*HSRDMK
Trigger: TTTCATGTCTCTTGAATGCCAGGTACATAGCCAACT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGGGGAGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp CAGTTCACCTGCAAAGTTACGCTGAGCAAACCAGGCTTCAAGCAGCACAACTCGAAAACTACCAATTTCTaGCCACATACGCTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: QFTCKVTLSKPGFKQHNSKTTNF*PHTLSL
Trigger: CAAAGACAGCGTATGTGGGCAGAAATTGGTAGTTTT...CGAGTTGTGCTGCTTGAAGCCTGGTTTGCTCAGCGTAACTTTGCAGGTGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp CATTCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAACCACCACACGGCCTCTaGGTGTTTAACATGAAACAG +
Preference number: 2 (lower is better)
Translates to: HSQDSLTLPSDTEIGSRKPPHGL*VFNMKQ
Trigger: CTGTTTCATGTTAAACACGCAGAGGCCGTGTGGTGG...TTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 90 bp TCCATGAATCTCAGCAAACACTCACAAGAACACACTGAGTTTCATTaGGTGTTCAGTTTAGTCAGCATGGCTTTCATTCCCACCACACGG +
Preference number: 2 (lower is better)
Translates to: SMNLSKHSQEHTEFH*VFSLVSMAFIPTTR
Trigger: CCGTGTGGTGGGAATGAAAGCCATGCTGACTAAACTGAACACCAAATGAAACTCAGTGTGTTCTTGTGAGTGTTTGCTGAGATTCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp TCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAGGCCTCACAAGAACACACTaGGTTTCATTTGGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: SQDSLTLPSDTEIGSRKGLTRTH*VSFGVQ
Trigger: CTGAACACCAAATGAAACTCAGTGTGTTCTTGTGAG...GCCTTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCGTCCTGGGGAAGAGCTaGAAAGCAATGCTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFVLGKS*KAMLCS
Trigger: GGAACAGAGCATTGCTTTCCAGCTCTTCCCCAGGAC...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp CATTCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAATTCCTCCTGTTTCTATaGCAGAATGAGGGCCCAATC +
Preference number: 2 (lower is better)
Translates to: HSQDSLTLPSDTEIGSRKFLLFL*QNEGPI
Trigger: GATTGGGCCCTCATTCTGCCATAGAAACAGGAGGAA...TTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp ACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCACTTCTGTCAATTGAGCTTTCCCCAAGCTCGCTCTaGCTTACCCAGTGGAATATG +
Preference number: 2 (lower is better)
Translates to: TSWLKLCFYKFSLLSIELSPSSL*LTQWNM
Trigger: CATATTCCACTGGGTAAGCCAGAGCGAGCTTGGGGA...AAGCTCAATTGACAGAAGTGAAAACTTGTAGAAGCACAGCTTTAACCATGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCGAGGACCTGCTTATCTaGAGTCACTTTGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFEDLLI*SHFGGE
Trigger: CTCCCCACCAAAGTGACTCCAGATAAGCAGGTCCTC...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCATTCCTTTGAGTGCTTaGCTGGGCTGGAGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFIPLSA*LGWSVS
Trigger: GGAAACACTCCAGCCCAGTCAAGCACTCAAAGGAAT...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR GCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCTTCCATACTGGGGAGTaGATGTGCCATGCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFFHTGE*MCHALL
Trigger: GAGAAGAGCATGGCACATGCACTCCCCAGTATGGAA...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCCAGAAACGTCAGCTTTaGAGGCTAGAGAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFQKRQL*RLERWL
Trigger: GAGCCATCTCTCTAGCCTCCAAAGCTGACGTTTCTG...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp AAAAGAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTGGAACTTCTCAAGACAAGATaGCCTCTTGACCTCTCGTCA +
Preference number: 2 (lower is better)
Translates to: KRRKSGRQISVLHRLLLELLKTR*PLDLSS
Trigger: TGACGAGAGGTCAAGAGGTCATCTTGTCTTGAGAAG...TTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp TCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAGGCTACATAGACTCTTACTaGAATTGTGTTTTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: SQDSLTLPSDTEIGSRKGYIDSY*NCVFWQ
Trigger: CTGCCAGAAAACACAATTCCAGTAAGAGTCTATGTA...GCCTTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 90 bp TCAAGAGACATGAAAACTACCAATTTCTGCCCACATACGCTGTCTTaGACATTACTACCATCTCTCTTACCTAAAACCCACAACGACAGA +
Preference number: 2 (lower is better)
Translates to: SRDMKTTNFCPHTLS*TLLPSLLPKTHNDR
Trigger: TCTGTCGTTGTGGGTTTTAGGTAAGAGAGATGGTAGTAATGTCAAAGACAGCGTATGTGGGCAGAAATTGGTAGTTTTCATGTCTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCATGGACACTGACGTGTaGAATGGAAAGGACAGGAAT +
Preference number: 2 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFMDTDV*NGKDRN
Trigger: ATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCAT...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp CATTCAAGAGACATGAAAACTACCAATTTCTGCCCACATACGCTGTCTTTGACATCCAAGTTTCAGTTCTaGGACACAAAGGAATCATCT +
Preference number: 2 (lower is better)
Translates to: HSRDMKTTNFCPHTLSLTSKFQF*DTKESS
Trigger: AGATGATTCCTTTGTGTCTCAGAACTGAAACTTGGA...TGTCAAAGACAGCGTATGTGGGCAGAAATTGGTAGTTTTCATGTCTCTTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp CATTCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAGCAGTGGGAAGTTCTTaGATACAAAGTTTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: HSQDSLTLPSDTEIGSRKAVGSS*IQSFLL
Trigger: CAAAAGAAAACTTTGTATTCAAGAACTTCCCACTGC...TTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp ACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCACTTCTGTCAATTGAGCTTAATGACAAGCCTGAATaGAAATGTGGTACCTGTCTT +
Preference number: 2 (lower is better)
Translates to: TSWLKLCFYKFSLLSIELNDKPE*KCGTCL
Trigger: AAGACAGGTACCACATTTTCATTCAGGCTTGTCATT...AAGCTCAATTGACAGAAGTGAAAACTTGTAGAAGCACAGCTTTAACCATGACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp ACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCACTTCTGTCAATTGAGCTTTGGAATTGTGTTTTCTaGCAGTGGGAAGTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: TSWLKLCFYKFSLLSIELWNCVF*QWEVLE
Trigger: TTCAAGAACTTCCCACTGCCAGAAAACACAATTCCA...AAGCTCAATTGACAGAAGTGAAAACTTGTAGAAGCACAGCTTTAACCATGACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR TCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCCTCACAAATTATCTCTaGTCTTTGGAATCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFLTNYL*SLESQK
Trigger: TTTCTGGGATTCCAAAGATCAGAGATAATTTGTGAG...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CCA 90 bp AAAAGAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTGGAACAAATGCTTTCAAGATaGAGTTTTCCTCCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: KRRKSGRQISVLHRLLLEQMLSR*SFPPVS
Trigger: AGAAACAGGAGGAAAACTCCATCTTGAAAGCATTTG...TTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp CACATCCCTCCTCAGGTGGCCATCATGGCTGCTCCATaGGGTAGCCAGGCAGCAGAAGCCCCCATACAGATG +
Preference number: 3 (lower is better)
Translates to: HIPPQVAIMAAP*GSQAAEAPIQM
Trigger: CATCTGTATGGGGGCTTCTGCTGCCTGGCTACCTCATGGAGCAGCCATGATGGCCACCTGAGGAGGGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp TGGAGTGTTTCCACATCCCTCCTCAGGTGGCCATCATaGCTGCTCCATGAGGTAGCCAGGCAGCAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: WSVSTSLLRWPS*LLHEVARQQKP
Trigger: GGGCTTCTGCTGCCTGGCTACCTCATGGAGCAGCCATGATGGCCACCTGAGGAGGGATGTGGAAACACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp GGTCCCCGGGATTTCCTGATGCCGGATTCCTTTGAGTaGTTGACTGGGCTGGAGTGTTTCCACATCCCTCCT +
Preference number: 3 (lower is better)
Translates to: GPRDFLMPDSFE*LTGLECFHIPP
Trigger: AGGAGGGATGTGGAAACACTCCAGCCCAGTCAAGCACTCAAAGGAATCCGGCATCAGGAAATCCCGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp GTGGCGAGAGCCATGTGCTCTGCTCACCATTCAGCCTaGTGTTCCTACAGTGGAATGCTCAGAGCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: VARAMCSAHHSA*CSYSGMLRASS
Trigger: TGAGCTGGCTCTGAGCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCGCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CAA 90 bp AGCCACAGAAGAGGGGCAGTGTTCTCAGGACAGTCTCCTCACCTTCCAGCCACCGATTCCTTTGAGTGCTaGACTGGGCTGGAGTGTTTC +
Preference number: 3 (lower is better)
Translates to: SHRRGAVFSGQSPHLPATDSFEC*TGLECF
Trigger: GAAACACTCCAGCCCAGTCAAGCACTCAAAGGAATC...GGTGGCTGGAAGGTGAGGAGACTGTCCTGAGAACACTGCCCCTCTTCTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp CACCCAGACTCTGGCACAAGCTTGAGTTGGCTGCTCTaGCATGGCATCTTGTCAGTGGCTCTGCCTGAAAGG +
Preference number: 3 (lower is better)
Translates to: HPDSGTSLSWLL*HGILSVALPER
Trigger: CCTTTCAGGCAGAGCCACTGACAAGATGCCATGTCAGAGCAGCCAACTCAAGCTTGTGCCAGAGTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp ATCTGGTGCCTGAGTCAGCAAGGTGACAGGAAGGAATaGCTCTGTCTCGCGGCTTCAGGACTAAACTCCCGT +
Preference number: 3 (lower is better)
Translates to: IWCLSQQGDRKE*LCLAASGLNSR
Trigger: ACGGGAGTTTAGTCCTGAAGCCGCGAGACAGAGCCATTCCTTCCTGTCACCTTGCTGACTCAGGCACCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp GGGAAACTGAGTGGCCTCATTCATGTGACCCTTGAGTaGCAAGCTCAAGAGGCAGCAGGCACATGGACTGAC +
Preference number: 3 (lower is better)
Translates to: GKLSGLIHVTLE*QAQEAAGTWTD
Trigger: GTCAGTCCATGTGCCTGCTGCCTCTTGAGCTTGCCACTCAAGGGTCACATGAATGAGGCCACTCAGTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp GGCGGTGGAAATGAATCCTGCATGGACACTGACGTGTaGAATGGAAAGGACAGGAATGTCCCGCAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GGGNESCMDTDV*NGKDRNVPQSC
Trigger: GCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGGATTCATTTCCACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp CTCTCTCCAAACCTGAGTATAGCCCTCCAGTCCCTCTaGGAAGTGGGCGGTGGAAATGAATCCTGCATGGAC +
Preference number: 3 (lower is better)
Translates to: LSPNLSIALQSL*EVGGGNESCMD
Trigger: GTCCATGCAGGATTCATTTCCACCGCCCACTTCTCAGAGGGACTGGAGGGCTATACTCAGGTTTGGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp TTGAGGGAAACTGAGTGGCCTCATTCATGTGACCCTTaGGTGGCAAGCTCAAGAGGCAGCAGGCACATGGAC +
Preference number: 3 (lower is better)
Translates to: LRETEWPHSCDP*VASSRGSRHMD
Trigger: GTCCATGTGCCTGCTGCCTCTTGAGCTTGCCACTCAAGGGTCACATGAATGAGGCCACTCAGTTTCCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp CTGCTCACCATTCAGCCTGCTGTTCCTACAGTGGAATaGTCAGAGCCAGCTCACAGCAACAGGACTCAGTCT +
Preference number: 3 (lower is better)
Translates to: LLTIQPAVPTVE*SEPAHSNRTQS
Trigger: AGACTGAGTCCTGTTGCTGTGAGCTGGCTCTGAGCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp AGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTaGCTCATGGCTGCTTATAACTCCAGCTCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: RGPSSVLSAQDS*LMAAYNSSSRG
Trigger: TCCCCTGGAGCTGGAGTTATAAGCAGCCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp CAATGCTCTGTTCCATACTGGGGAGTGCATGTGCCATaGTCTTCTCTCCTAGTGAGATGCGTGTTCCTAGGG +
Preference number: 3 (lower is better)
Translates to: QCSVPYWGVHVP*SSLLVRCVFLG
Trigger: CCCTAGGAACACGCATCTCACTAGGAGAGAAGAGCATGGCACATGCACTCCCCAGTATGGAACAGAGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp ACCTGCTTATCTGGAGTCACTTTGGTGGGGAGTTCTTaGTCCCATGGTCAAGGGACTGCTAGCTTATCCACG +
Preference number: 3 (lower is better)
Translates to: TCLSGVTLVGSS*SHGQGTASLST
Trigger: CGTGGATAAGCTAGCAGTCCCTTGACCATGGGAGCAAGAACTCCCCACCAAAGTGACTCCAGATAAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp TCCAGGCAGGCGGTACAGTGGACAACAAACAGTCAGTaGATTCATCAGAGGAAAATGCCACTGGGAGAGCAG +
Preference number: 3 (lower is better)
Translates to: SRQAVQWTTNSQ*IHQRKMPLGEQ
Trigger: CTGCTCTCCCAGTGGCATTTTCCTCTGATGAATGCACTGACTGTTTGTTGTCCACTGTACCGCCTGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp GCAAACCAGGCTTCAAGCAGCACAACTCGAACCCGCTaGTTGTTTGAGAAGTGTCCTTTTCGAAAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: ANQASSSTTRTR*LFEKCPFRKAG
Trigger: CCCTGCCTTTCGAAAAGGACACTTCTCAAACAAGCAGCGGGTTCGAGTTGTGCTGCTTGAAGCCTGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp AAGTCTCAAGCCCAATGTGGCGAGAGCCATGTGCTCTaGTCACCATTCAGCCTGCTGTTCCTACAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: KSQAQCGESHVL*SPFSLLFLQWN
Trigger: ATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCGCCACATTGGGCTTGAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp CTTAGAAGTCTCAAGCCCAATGTGGCGAGAGCCATGTaGTCTGCTCACCATTCAGCCTGCTGTTCCTACAGT +
Preference number: 3 (lower is better)
Translates to: LRSLKPNVARAM*SAHHSACCSYS
Trigger: ACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCGCCACATTGGGCTTGAGACTTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp TGGGGAAGAGCTGGAAAGCAATGCTCTGTTCCATACTaGGGAGTGCATGTGCCATGCTCTTCTCTCCTAGTG +
Preference number: 3 (lower is better)
Translates to: WGRAGKQCSVPY*GVHVPCSSLLV
Trigger: CACTAGGAGAGAAGAGCATGGCACATGCACTCCCCAGTATGGAACAGAGCATTGCTTTCCAGCTCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp AGGACAAGAGGACCTGCTTATCTGGAGTCACTTTGGTaGGGAGTTCTTGCTCCCATGGTCAAGGGACTGCTA +
Preference number: 3 (lower is better)
Translates to: RTRGPAYLESLW*GVLAPMVKGLL
Trigger: TAGCAGTCCCTTGACCATGGGAGCAAGAACTCCCCACCAAAGTGACTCCAGATAAGCAGGTCCTCTTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp TGTAGGACAAGAGGACCTGCTTATCTGGAGTCACTTTaGTGGGGAGTTCTTGCTCCCATGGTCAAGGGACTG +
Preference number: 3 (lower is better)
Translates to: CRTRGPAYLESL*WGVLAPMVKGL
Trigger: CAGTCCCTTGACCATGGGAGCAAGAACTCCCCACCAAAGTGACTCCAGATAAGCAGGTCCTCTTGTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp GGACATCTCCACTACTTAGAAGTCTCAAGCCCAATGTaGCGAGAGCCATGTGCTCTGCTCACCATTCAGCCT +
Preference number: 3 (lower is better)
Translates to: GHLHYLEVSSPM*REPCALLTIQP
Trigger: AGGCTGAATGGTGAGCAGAGCACATGGCTCTCGCCACATTGGGCTTGAGACTTCTAAGTAGTGGAGATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp CAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACTCATaGCTGCTTATAACTCCAGCTCCAGGGGAGGTTTTC +
Preference number: 3 (lower is better)
Translates to: QVQFSVPRIADS*LLITPAPGEVF
Trigger: GAAAACCTCCCCTGGAGCTGGAGTTATAAGCAGCCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp GGCTTCAAGCAGCACAACTCGAACCCGCTGCTTGTTTaGGAAGTGTCCTTTTCGAAAGGCAGGGTACCAAAA +
Preference number: 3 (lower is better)
Translates to: GFKQHNSNPLLV*EVSFSKGRVPK
Trigger: TTTTGGTACCCTGCCTTTCGAAAAGGACACTTCTCAAACAAGCAGCGGGTTCGAGTTGTGCTGCTTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp AGGACTCAGTCTGGCCGCTGCTTCTGGACAGTTCCATaGATCTCAGCAAACACTCACAAGAACACACTGAGT +
Preference number: 3 (lower is better)
Translates to: RTQSGRCFWTVP*ISANTHKNTLS
Trigger: ACTCAGTGTGTTCTTGTGAGTGTTTGCTGAGATTCATGGAACTGTCCAGAAGCAGCGGCCAGACTGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp AGACACAAAGGAATCATCTTAGTCCTGGGGAAGAGCTaGAAAGCAATGCTCTGTTCCATACTGGGGAGTGCA +
Preference number: 3 (lower is better)
Translates to: RHKGIILVLGKS*KAMLCSILGSA
Trigger: TGCACTCCCCAGTATGGAACAGAGCATTGCTTTCCAGCTCTTCCCCAGGACTAAGATGATTCCTTTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CAA 90 bp ACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCACTTCTGTCAATTGAGCTTGCAAGCTTACAGCAGTaGCCTTCCAGGCAGGCGGTA +
Preference number: 3 (lower is better)
Translates to: TSWLKLCFYKFSLLSIELASLQQ*PSRQAV
Trigger: TACCGCCTGCCTGGAAGGCAACTGCTGTAAGCTTGC...AAGCTCAATTGACAGAAGTGAAAACTTGTAGAAGCACAGCTTTAACCATGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp TCAAGATGGAGTTTTCCTCCTGTTTCTATGGCAGAATaGGGGCCCAATCTGCAGACTTCTCCAAGTTTCAGT +
Preference number: 3 (lower is better)
Translates to: SRWSFPPVSMAE*GPNLQTSPSFS
Trigger: ACTGAAACTTGGAGAAGTCTGCAGATTGGGCCCTCATTCTGCCATAGAAACAGGAGGAAAACTCCATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR GCA 72 bp AAAGGTCTGATTGTAGACTGTCTCTTAGAAACCAACTaGAAAAAGCTGCGTGCACAGTTCCCATTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: KGLIVDCLLETN*KKLRAQFPFPL
Trigger: GAGGGGAAATGGGAACTGTGCACGCAGCTTTTTGCAGTTGGTTTCTAAGAGACAGTCTACAATCAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CAA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCCCAGAAACGTCAGCTTaGGAGGCTAGAGAGATGGCT +
Preference number: 3 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFPETSA*EAREMA
Trigger: AGCCATCTCTCTAGCCTCCAAAGCTGACGTTTCTGG...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp AAATGCTTTCAAGATGGAGTTTTCCTCCTGTTTCTATaGCAGAATGAGGGCCCAATCTGCAGACTTCTCCAA +
Preference number: 3 (lower is better)
Translates to: KCFQDGVFLLFL*QNEGPICRLLQ
Trigger: TTGGAGAAGTCTGCAGATTGGGCCCTCATTCTGCCATAGAAACAGGAGGAAAACTCCATCTTGAAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp CCAACAAGAAACCCACAAAGTACTGTTTCTCCTCTATaGAGCAACAAGGCCAAGGCAAATTTAAGGTCTCAC +
Preference number: 3 (lower is better)
Translates to: PTRNPQSTVSPL*SNKAKANLRSH
Trigger: GTGAGACCTTAAATTTGCCTTGGCCTTGTTGCTTCATAGAGGAGAAACAGTACTTTGTGGGTTTCTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp GAAAATAGTTGTATCCACGCCAACTCTCATTCTAAATaGATGTCTGAATCTAGACCAGGGACAGGCATTGCC +
Preference number: 3 (lower is better)
Translates to: ENSCIHANSHSK*MSESRPGTGIA
Trigger: GGCAATGCCTGTCCCTGGTCTAGATTCAGACATTCATTTAGAATGAGAGTTGGCGTGGATACAACTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp AGAAGCAAGCTCTGTCTTCTTTCCTGGGAATATACATaGCAGTATGGCAGTAACATAAAGGATGGGAACAGG +
Preference number: 3 (lower is better)
Translates to: RSKLCLLSWEYT*QYGSNIKDGNR
Trigger: CCTGTTCCCATCCTTTATGTTACTGCCATACTGTCATGTATATTCCCAGGAAAGAAGACAGAGCTTGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CAA 90 bp CATTCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAGTTAGACATTCAAAGTaGGCTATGTACCTGGCATTC +
Preference number: 3 (lower is better)
Translates to: HSQDSLTLPSDTEIGSRKVRHSK*AMYLAF
Trigger: GAATGCCAGGTACATAGCCAACTTTGAATGTCTAAC...TTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR-3UTR CAA 90 bp CATTCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAAGACTAGCTCTGGGTTaGAAGCTTTGCCTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: HSQDSLTLPSDTEIGSRKRLALG*KLCLLS
Trigger: ACTTAAAAGGCAAAGCTTCAAACCCAGAGCTAGTCT...TTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR TCA 72 bp TTCCATGAATCTCAGCAAACACTCACAAGAACACACTaGGTTTCATTTGGTGTTCAGTTTAGTCAGCATGGC +
Preference number: 3 (lower is better)
Translates to: FHESQQTLTRTH*VSFGVQFSQHG
Trigger: GCCATGCTGACTAAACTGAACACCAAATGAAACTCAGTGTGTTCTTGTGAGTGTTTGCTGAGATTCATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp CAGGCAGGCAGATATCAGTATTACATAGACTCTTACTaGAATTGTGTTTTCTGGCAGTGGGAAGTTCTTGAA +
Preference number: 3 (lower is better)
Translates to: QAGRYQYYIDSY*NCVFWQWEVLE
Trigger: TTCAAGAACTTCCCACTGCCAGAAAACACAATTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp TTCTGTAAATTTTCTCAGCAGTTAGACATTCAAAGTTaGCTATGTACCTGGCATTCAAGAGACATGAAAACT +
Preference number: 3 (lower is better)
Translates to: FCKFSQQLDIQS*LCTWHSRDMKT
Trigger: AGTTTTCATGTCTCTTGAATGCCAGGTACATAGCCAACTTTGAATGTCTAACTGCTGAGAAAATTTACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CCA 72 bp CAGTATTACATAGACTCTTACTGGAATTGTGTTTTCTaGCAGTGGGAAGTTCTTGAATACAAAGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: QYYIDSYWNCVF*QWEVLEYKVFF
Trigger: AAAGAAAACTTTGTATTCAAGAACTTCCCACTGCCAGAAAACACAATTCCAGTAAGAGTCTATGTAATACTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp CAGGCGGTCTGCTTCGGTCCCCGGGATTTCCTGATGCCGGATTCCTTTGAGTGCGGCCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QAVCFGPRDFLMPDSFECGLCPR*ARRGAG
Trigger: GCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCC...GCACTCAAAGGAATCCGGCATCAGGAAATCCCGGGGACCGAAGCAGACCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGGCCCCACGCGCCCTTaGGGGACCACTTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAGPTRP*GTTSRR
Trigger: CCTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGTTAGGAGGGCCAGCTaGGTGGGCCCCACGCGCCCT +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAVRRAS*VGPTRP
Trigger: AGGGCGCGTGGGGCCCACTCAGCTGGCCCTCCTAAC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGGCCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAGLCPR*ARRGAG
Trigger: GCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGGCCCCACGCGCCCTTaGGGGACCACTTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAGPTRP*GTTSRR
Trigger: CCTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGGAGGGCCAGCTGAGTaGGCCCCACGCGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAGGPAE*APRALG
Trigger: CCCAAGGGCGCGTGGGGCCCACTCAGCTGGCCCTCC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CTGGCCTCCCCTATACACACACACACACACACACACACACACACACACACACACGGAGGGCCAGCTGAGTaGGCCCCACGCGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LASPIHTHTHTHTHTHTHGGPAE*APRALG
Trigger: CCCAAGGGCGCGTGGGGCCCACTCAGCTGGCCCTCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGGGGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGTTAGGAGGGCCAGCTaGGTGGGCCCCACGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAVRRAS*VGPTRP
Trigger: AGGGCGCGTGGGGCCCACTCAGCTGGCCCTCCTAAC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR GCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGCCGCATATCCGGCAATaGCATGCCCGGGCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAPHIRQ*HARAGR
Trigger: ACGACCCGCCCGGGCATGGCATTGCCGGATATGCGG...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGCGGCGCCCTGTCTTCTaGCGAAGGGCCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAARRPVF*RRACCT
Trigger: AGTGCAGCAGGCCCTTCGCCAGAAGACAGGGCGCCG...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACCGGCGCCCTGTCTTCTaGCGAAGGGCCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RAALPEDQVQFSVPRIADRRPVF*RRACCT
Trigger: AGTGCAGCAGGCCCTTCGCCAGAAGACAGGGCGCCG...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp ACAGTCTCCTCACCTTCCAGCCACCACTACCAGTGTGCTAGCGCCTCATCCAGGGCGGGTCGTACTAGCTaGCACTTGGCACACCAGTCT +
Preference number: 4 (lower is better)
Translates to: TVSSPSSHHYQCASASSRAGRTS*HLAHQS
Trigger: AGACTGGTGTGCCAAGTGCCAGCTAGTACGACCCGC...CCTGGATGAGGCGCTAGCACACTGGTAGTGGTGGCTGGAAGGTGAGGAGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGTCTTCGGCGGGGGTGTaGACTGTGTGTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAASSAGV*TVCVPR
Trigger: CCTGGGCACACACACAGTCCACACCCCCGCCGAAGA...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR GCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGTTCTGGCGAAGGGCCTaGTGCACTTCCCTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAFWRRA*CTSLSV
Trigger: AACGGAGAGGGAAGTGCAGCAGGCCCTTCGCCAGAA...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCCCAGGGTGGAGAACTaGAGCCAGTTGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAPRVEN*SQLRRK
Trigger: CTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTGGG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CGAGAGCCATGTGCTCTGCTCACCATTCAGCCTGCTGTTCCTACAGTGGAATGCTGTGTGTGCCCAGGGTaGAGAACTGGAGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: REPCALLTIQPAVPTVECCVCPG*RTGASC
Trigger: GCAACTGGCTCCAGTTCTCCACCCTGGGCACACACA...GCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 72 bp CCCCGGGATTTCCTGATGCCGGATTCCTTTGAGTGCTaGACTGGGCTGGAGTGTTTCCACATCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PRDFLMPDSFEC*TGLECFHIPPQ
Trigger: CTGAGGAGGGATGTGGAAACACTCCAGCCCAGTCAAGCACTCAAAGGAATCCGGCATCAGGAAATCCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGCCTTTTTGGCTCCTCTaGGCCAAGGAATTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAPFWLL*AKEFGG
Trigger: GCCTCCGAATTCCTTGGCTCAGAGGAGCCAAAAAGG...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGTGCCAGGAAGCCACGTaGAGGAAAACCGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAACQEAT*RKTGKS
Trigger: GCTTTTGCCGGTTTTCCTTCACGTGGCTTCCTGGCA...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGTACATGTAGCCCAGTaGGAACAGCCCGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAVHVAQ*EQPEAQ
Trigger: CTGAGCCTCGGGCTGTTCTCACTGGGCTACATGTAC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR GCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGTGTGGACTGTGTGTGTaGCCAGGGTGGAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAACGLCV*PGWRTG
Trigger: TCCAGTTCTCCACCCTGGGCACACACACAGTCCACA...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGGTCGTACTAGCTaGCACTTGGCACACCAGTCT +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAAGRTS*HLAHQS
Trigger: AGACTGGTGTGCCAAGTGCCAGCTAGTACGACCCGC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTTGTGTGTGCCCAGGGTaGAGAACTGGAGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRACVCPG*RTGASC
Trigger: GCAACTGGCTCCAGTTCTCCACCCTGGGCACACACA...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGTCCGGCCGAAGTGATTaGCAGGTAAGCCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAASGRSD*QVSHLS
Trigger: TGACAGATGGCTTACCTGTCAATCACTTCGGCCGGA...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCCTTTTTGGCTCCTCTaGGCCAAGGAATTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAPFWLL*AKEFGG
Trigger: GCCTCCGAATTCCTTGGCTCAGAGGAGCCAAAAAGG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTTGCCAGGAAGCCACGTaGAGGAAAACCGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRACQEAT*RKTGKS
Trigger: GCTTTTGCCGGTTTTCCTTCACGTGGCTTCCTGGCA...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR GCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTAGAACTGGAGCCAGTTaGGCAGGAAGCCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRARTGAS*AGSPCC
Trigger: ACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCT...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR GCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTTGTGGACTGTGTGTGTaGCCAGGGTGGAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRACGLCV*PGWRTG
Trigger: TCCAGTTCTCCACCCTGGGCACACACACAGTCCACA...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp AGCCACAGAAGAGGGGCAGTGTTCTCAGGACAGTCTCCTCACCTTCCAGCCACCAGCCTGGATTCTTCTTaGCTCGGTACAAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: SHRRGAVFSGQSPHLPATSLDSS*LGTRLR
Trigger: TCTTAGCCTTGTACCGAGCCAAGAAGAATCCAGGCT...GGTGGCTGGAAGGTGAGGAGACTGTCCTGAGAACACTGCCCCTCTTCTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGTGCCGGGGAACCCTTTaGTCTTCTCCTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAACRGTL*SSPALF
Trigger: AAAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCA...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTAAGCCCCTGTTGTACTaGCCTGTGTCCACGATGAGC +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAKPLLY*PVSTMS
Trigger: GCTCATCGTGGACACAGGCCAGTACAACAGGGGCTT...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp GCCATGTGCTCTGCTCACCATTCAGCCTGCTGTTCCTACAGTGGAATGCTCAGATCCGGCCGAAGTGATTaGCAGGTAAGCCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: AMCSAHHSACCSYSGMLRSGRSD*QVSHLS
Trigger: TGACAGATGGCTTACCTGTCAATCACTTCGGCCGGA...TCTGAGCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGGTGAAGGACAGGGCTaGGCTGTAATTAGCGTAAAC +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAGEGQG*AVISVN
Trigger: GTTTACGCTAATTACAGCTCAGCCCTGTCCTTCACC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR GCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGTAGTAATACCAGAGTaGCAGCATGGGAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAVVIPE*QHGKGG
Trigger: ACCTCCCTTCCCATGCTGGCACTCTGGTATTACTAC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp ACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCACTTCTGTCAATTGAGCTTGGCCCCACGCGCCCTTaGGGGACCACTTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TSWLKLCFYKFSLLSIELGPTRP*GTTSRR
Trigger: CCTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCC...AAGCTCAATTGACAGAAGTGAAAACTTGTAGAAGCACAGCTTTAACCATGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTTGCCGGGGAACCCTTTaGTCTTCTCCTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRACRGTL*SSPALF
Trigger: AAAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCA...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGTACTAGCTGGCACTTaGCACACCAGTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAVLAGT*HTSLPS
Trigger: TGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTAC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CAGTTCACCTGCAAAGTTACGCTGAGCAAACCAGGCTTCAAGCAGCACAACTCGAAGCCCCTGTTGTACTaGCCTGTGTCCACGATGAGC +
Preference number: 4 (lower is better)
Translates to: QFTCKVTLSKPGFKQHNSKPLLY*PVSTMS
Trigger: GCTCATCGTGGACACAGGCCAGTACAACAGGGGCTT...CGAGTTGTGCTGCTTGAAGCCTGGTTTGCTCAGCGTAACTTTGCAGGTGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCGTTAGGAGGGCCAGCTaGGTGGGCCCCACGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFVRRAS*VGPTRP
Trigger: AGGGCGCGTGGGGCCCACTCAGCTGGCCCTCCTAAC...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGGGATTTGTCATTGCTaGGGTAGCCTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAGICHC*GSLDSS
Trigger: AGAAGAATCCAGGCTACCTCAGCAATGACAAATCCC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACGGGATTTGTCATTGCTaGGGTAGCCTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: RAALPEDQVQFSVPRIADGICHC*GSLDSS
Trigger: AGAAGAATCCAGGCTACCTCAGCAATGACAAATCCC...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGAAATGCTTGATGGTTTaGTTCTCCGACGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAKCLMV*FSDAAD
Trigger: GTCTGCTGCGTCGGAGAATCAAACCATCAAGCATTT...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036321.14
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGGTGAAGGACAGGGCTaGGCTGTAATTAGCGTAAAC +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAGEGQG*AVISVN
Trigger: GTTTACGCTAATTACAGCTCAGCCCTGTCCTTCACC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp ACAGTCTCCTCACCTTCCAGCCACCACTACCAGTGTGCTAGCGCCTCATCCAGGAAATGCTTGATGGTTTaGTTCTCCGACGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: TVSSPSSHHYQCASASSRKCLMV*FSDAAI
Trigger: AATAGCTGCGTCGGAGAATCAAACCATCAAGCATTT...CCTGGATGAGGCGCTAGCACACTGGTAGTGGTGGCTGGAAGGTGAGGAGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGATTGCTGAGGTAGCCTaGATTCTTCTTGGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAIAEVA*ILLGSV
Trigger: TACCGAGCCAAGAAGAATCCAGGCTACCTCAGCAAT...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CGAGAGCCATGTGCTCTGCTCACCATTCAGCCTGCTGTTCCTACAGTGGAATGCATTGCTGAGGTAGCCTaGATTCTTCTTGGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: REPCALLTIQPAVPTVECIAEVA*ILLGSV
Trigger: TACCGAGCCAAGAAGAATCCAGGCTACCTCAGCAAT...GCATTCCACTGTAGGAACAGCAGGCTGAATGGTGAGCAGAGCACATGGCTCTCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGACCGGGCATTCAATTTaGCTGTTGCTTGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAATGHSI*LLLGDL
Trigger: CAAATCCCCAAGCAACAGCCAAATTGAATGCCCGGT...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGTACTAGCTGGCACTTaGCACACCAGTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAVLAGT*HTSLPS
Trigger: TGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTAC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCCTTCATCGAGGTCTTaGCAATCACACAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAPSSRS*QSHKQA
Trigger: TGCCTGTTTGTGTGATTGTCAAGACCTCGATGAAGG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp TGGGAACAGGGAGGGATCTTTATGAAGCTTAGATGTAGGACAAGAGGACCTGCTCCTTTTTGGCTCCTCTaGGCCAAGGAATTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WEQGGIFMKLRCRTRGPAPFWLL*AKEFGG
Trigger: GCCTCCGAATTCCTTGGCTCAGAGGAGCCAAAAAGG...AGCAGGTCCTCTTGTCCTACATCTAAGCTTCATAAAGATCCCTCCCTGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGCTTTCCTTCTGTGAGTaGGGTAGTAATACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: AWTLTCEMERTGMSRRAALSFCE*GSNTRV
Trigger: CACTCTGGTATTACTACCTCACTCACAGAAGGAAAG...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTTTCCGTAAACCGAAGTaGGCAAGAAGATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAFRKPK*ARRWKG
Trigger: CCCTTTCCATCTTCTTGCTCACTTCGGTTTACGGAA...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTTGTTTATCAGCTGGATaGGGAAGATGTAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRACLSAG*GRCRPC
Trigger: GCATGGCCTACATCTTCCTCATCCAGCTGATAAACA...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCTATCCCAGACACAATaGTGGTCCATTCTCCGTACA +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRALSQTQ*WSILRT
Trigger: TGTACGGAGAATGGACCATCATTGTGTCTGGGATAG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232055.2
CDS-3UTR GCA 90 bp TGGGAACAGGGAGGGATCTTTATGAAGCTTAGATGTAGGACAAGAGGACCTGCTAGAACTGGAGCCAGTTaGGCAGGAAGCCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: WEQGGIFMKLRCRTRGPARTGAS*AGSPCC
Trigger: ACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCT...AGCAGGTCCTCTTGTCCTACATCTAAGCTTCATAAAGATCCCTCCCTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTAGCCTGGATTCTTCTTaGCTCGGTACAAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRASLDSS*LGTRLR
Trigger: TCTTAGCCTTGTACCGAGCCAAGAAGAATCCAGGCT...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTATTGCTGAGGTAGCCTaGATTCTTCTTGGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAIAEVA*ILLGSV
Trigger: TACCGAGCCAAGAAGAATCCAGGCTACCTCAGCAAT...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTACCGGGCATTCAATTTaGCTGTTGCTTGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRATGHSI*LLLGDL
Trigger: CAAATCCCCAAGCAACAGCCAAATTGAATGCCCGGT...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
3UTR CAA 72 bp AACCAGGCTTCAAGCAGCACAACTCGAACCCGCTGCTaGTTTGAGAAGTGTCCTTTTCGAAAGGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: NQASSSTTRTRC*FEKCPFRKAGY
Trigger: GTACCCTGCCTTTCGAAAAGGACACTTCTCAAACAAGCAGCGGGTTCGAGTTGTGCTGCTTGAAGCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCAGAAATTGTATCCGTaGTTCTTTCGCAAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAQKLYP*FFRKSP
Trigger: CGGAGACTTGCGAAAGAATCACGGATACAATTTCTG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCTTTCCTTCTGTGAGTaGGGTAGTAATACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PAWTLTCEMERTGMSRRALSFCE*GSNTRV
Trigger: CACTCTGGTATTACTACCTCACTCACAGAAGGAAAG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR TCA 90 bp GCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACTCATGGCTTTCCTTCTGTGAGTaGGGTAGTAATACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALPEDQVQFSVPRIADSWLSFCE*GSNTRV
Trigger: CACTCTGGTATTACTACCTCACTCACAGAAGGAAAG...CCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR GCA 90 bp AAAAGAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTGGAACCGCATATCCGGCAATaGCATGCCCGGGCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: KRRKSGRQISVLHRLLLEPHIRQ*HARAGR
Trigger: ACGACCCGCCCGGGCATGGCATTGCCGGATATGCGG...TTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 72 bp TGTGAGCCACAAAGCCAACAAGGAATCCCTGTCCATTaGAGGGAAACTGAGTGGCCTCATTCATGTGACCCT +
Preference number: 4 (lower is better)
Translates to: CEPQSQQGIPVH*RETEWPHSCDP
Trigger: AGGGTCACATGAATGAGGCCACTCAGTTTCCCTCAAATGGACAGGGATTCCTTGTTGGCTTTGTGGCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 72 bp TCTGCAAACCGTCAAAGTTCTCCAGAAACGTCAGCTTaGGAGGCTAGAGAGATGGCTCAGCAGTTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SANRQSSPETSA*EAREMAQQLGA
Trigger: TGCTCCTAACTGCTGAGCCATCTCTCTAGCCTCCAAAGCTGACGTTTCTGGAGAACTTTGACGGTTTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp AAAAGAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTGGAATCTTCGGCGGGGGTGTaGACTGTGTGTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KRRKSGRQISVLHRLLLESSAGV*TVCVPR
Trigger: CCTGGGCACACACACAGTCCACACCCCCGCCGAAGA...TTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp TGGGAACAGGGAGGGATCTTTATGAAGCTTAGATGTAGGACAAGAGGACCTGCTTTCCGTAAACCGAAGTaGGCAAGAAGATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: WEQGGIFMKLRCRTRGPAFRKPK*ARRWKG
Trigger: CCCTTTCCATCTTCTTGCTCACTTCGGTTTACGGAA...AGCAGGTCCTCTTGTCCTACATCTAAGCTTCATAAAGATCCCTCCCTGTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp ACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCACTTCTGTCAATTGAGCTTCCCAGGGTGGAGAACTaGAGCCAGTTGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSWLKLCFYKFSLLSIELPRVEN*SQLRRK
Trigger: CTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTGGG...AAGCTCAATTGACAGAAGTGAAAACTTGTAGAAGCACAGCTTTAACCATGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCTGCCAGGAAGCCACGTaGAGGAAAACCGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFCQEAT*RKTGKS
Trigger: GCTTTTGCCGGTTTTCCTTCACGTGGCTTCCTGGCA...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR GCA 90 bp GGAGCATTGCTTTTATTAGACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCTGTGGACTGTGTGTGTaGCCAGGGTGGAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: GALLLLDVMVKAVLLQVFCGLCV*PGWRTG
Trigger: TCCAGTTCTCCACCCTGGGCACACACACAGTCCACA...GAAAACTTGTAGAAGCACAGCTTTAACCATGACGTCTAATAAAAGCAATGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp CATTCCCAGGATTCACTTACTCTACCATCAGACACAGAAATCGGATCACGAAAAACCGGGCATTCAATTTaGCTGTTGCTTGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: HSQDSLTLPSDTEIGSRKTGHSI*LLLGDL
Trigger: CAAATCCCCAAGCAACAGCCAAATTGAATGCCCGGT...TTTTCGTGATCCGATTTCTGTGTCTGATGGTAGAGTAAGTGAATCCTGGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp AAAAGAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTGGAATGCCGGGGAACCCTTTaGTCTTCTCCTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KRRKSGRQISVLHRLLLECRGTL*SSPALF
Trigger: AAAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCA...TTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CCA 90 bp CATTCAAGAGACATGAAAACTACCAATTTCTGCCCACATACGCTGTCTTTGACAGTACTAGCTGGCACTTaGCACACCAGTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HSRDMKTTNFCPHTLSLTVLAGT*HTSLPS
Trigger: TGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTAC...TGTCAAAGACAGCGTATGTGGGCAGAAATTGGTAGTTTTCATGTCTCTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp CATTCAAGAGACATGAAAACTACCAATTTCTGCCCACATACGCTGTCTTTGACACCTTCATCGAGGTCTTaGCAATCACACAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: HSRDMKTTNFCPHTLSLTPSSRS*QSHKQA
Trigger: TGCCTGTTTGTGTGATTGTCAAGACCTCGATGAAGG...TGTCAAAGACAGCGTATGTGGGCAGAAATTGGTAGTTTTCATGTCTCTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp AAAAGAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTGGAAGGTGAAGGACAGGGCTaGGCTGTAATTAGCGTAAAC +
Preference number: 4 (lower is better)
Translates to: KRRKSGRQISVLHRLLLEGEGQG*AVISVN
Trigger: GTTTACGCTAATTACAGCTCAGCCCTGTCCTTCACC...TTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR TCA 90 bp CATTCAAGAGACATGAAAACTACCAATTTCTGCCCACATACGCTGTCTTTGACATGTTTATCAGCTGGATaGGGAAGATGTAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: HSRDMKTTNFCPHTLSLTCLSAG*GRCRPC
Trigger: GCATGGCCTACATCTTCCTCATCCAGCTGATAAACA...TGTCAAAGACAGCGTATGTGGGCAGAAATTGGTAGTTTTCATGTCTCTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR GCA 90 bp ACGTCATGGTTAAAGCTGTGCTTCTACAAGTTTTCACTTCTGTCAATTGAGCTTGTAGTAATACCAGAGTaGCAGCATGGGAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TSWLKLCFYKFSLLSIELVVIPE*QHGKGG
Trigger: ACCTCCCTTCCCATGCTGGCACTCTGGTATTACTAC...AAGCTCAATTGACAGAAGTGAAAACTTGTAGAAGCACAGCTTTAACCATGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
3UTR CAA 72 bp CTCAGCAAACACTCACAAGAACACACTGAGTTTCATTaGGTGTTCAGTTTAGTCAGCATGGCTTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: LSKHSQEHTEFH*VFSLVSMAFIP
Trigger: GGGAATGAAAGCCATGCTGACTAAACTGAACACCAAATGAAACTCAGTGTGTTCTTGTGAGTGTTTGCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS TCA 90 bp GCCAGTTGCGCAGGAAGCCCCTGTTGTACTGGCCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGCGCCCTGTCTTCTGGCGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: ASCAGSPCCTGLCPR*ARRGAGALSSGEGP
Trigger: AGGCCCTTCGCCAGAAGACAGGGCGCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 90 bp AGGGTGGAGAACTGGAGCCAGTTGCGCAGGAAGCCCCTGTTGTACTaGCCTGTGTCCACGATGAGCCCGCAGAGGAGCCGGCGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: RVENWSQLRRKPLLY*PVSTMSPQRSRRPV
Trigger: GACAGGGCGCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGGGCCCCACGCGCCCTaGGGGGACCACTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAGPHAP*GDHFPQ
Trigger: CTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCCC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 90 bp TCTTCGGCGGGGGTGTGGACTGTGTGTGTGCCCAGGGTGGAGAACTaGAGCCAGTTGCGCAGGAAGCCCCTGTTGTACTGGCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SSAGVWTVCVPRVEN*SQLRRKPLLYWPVS
Trigger: GGACACAGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTGGGCACACACACAGTCCACACCCCCGCCGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGGGCCCCACGCGCCCTaGGGGGACCACTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAGPHAP*GDHFPQ
Trigger: CTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCCC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 90 bp AAGGCTAAGAGTATCAGAAGTAACCCGCAGGTTAGGAGGGCCAGCTaGGTGGGCCCCACGCGCCCTTGGGGGACCACTTCCCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: KAKSIRSNPQVRRAS*VGPTRPWGTTSRRN
Trigger: GTTCCTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCCCACTCAGCTGGCCCTCCTAACCTGCGGGTTACTTCTGATACTCTTAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 90 bp AGACGATGTCTTCGGCGGGGGTGTGGACTGTGTGTGTGCCCAGGGTaGAGAACTGGAGCCAGTTGCGCAGGAAGCCCCTGTTGTACTGGC +
Preference number: 5 (lower is better)
Translates to: RRCLRRGCGLCVCPG*RTGASCAGSPCCTG
Trigger: GCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTGGGCACACACACAGTCCACACCCCCGCCGAAGACATCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 90 bp CTAAGAGTATCAGAAGTAACCCGCAGGTTAGGAGGGCCAGCTGAGTaGGCCCCACGCGCCCTTGGGGGACCACTTCCCGCAGGAACACAT +
Preference number: 5 (lower is better)
Translates to: LRVSEVTRRLGGPAE*APRALGGPLPAGTH
Trigger: ATGTGTTCCTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCCCACTCAGCTGGCCCTCCTAACCTGCGGGTTACTTCTGATACTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 90 bp ATATCCGGCAATGCCATGCCCGGGCGGGTCGTACTAGCTGGCACTTaGCACACCAGTCTTCCTTCACTTTGGCAGGGCTGTCAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: ISGNAMPGRVVLAGT*HTSLPSLWQGCQAP
Trigger: TGGGGCTTGACAGCCCTGCCAAAGTGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTACGACCCGCCCGGGCATGGCATTGCCGGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp AGCCACAGAAGAGGGGCAGTGTTCTCAGGACAGTCTCCTCACCTTCCAGCCACCGAGAACTGGAGCCAGTaGCGCAGGAAGCCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SHRRGAVFSGQSPHLPATENWSQ*RRKPLL
Trigger: CAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTC...GGTGGCTGGAAGGTGAGGAGACTGTCCTGAGAACACTGCCCCTCTTCTGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CAA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGCGCAGGAAGCCCCTGTaGTACTGGCCTGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: AWTLTCEMERTGMSRRAARRKPL*YWPVST
Trigger: CGTGGACACAGGCCAGTACAACAGGGGCTTCCTGCG...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp ACAGTCTCCTCACCTTCCAGCCACCACTACCAGTGTGCTAGCGCCTCATCCAGGCGTACTAGCTGGCACTaGGCACACCAGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TVSSPSSHHYQCASASSRRTSWH*AHQSSF
Trigger: GAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTACG...CCTGGATGAGGCGCTAGCACACTGGTAGTGGTGGCTGGAAGGTGAGGAGACTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCGCAGGAAGCCCCTGTaGTACTGGCCTGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRARRKPL*YWPVST
Trigger: CGTGGACACAGGCCAGTACAACAGGGGCTTCCTGCG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGAGAACTGGAGCCAGTaGCGCAGGAAGCCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAENWSQ*RRKPLL
Trigger: CAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACGTGCCGGGGAACCCTTaGGTCTTCTCCTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: RAALPEDQVQFSVPRIADVPGNP*VFSCPF
Trigger: AAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCAC...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGAGAACTGGAGCCAGTaGCGCAGGAAGCCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAENWSQ*RRKPLL
Trigger: CAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp AGCCACAGAAGAGGGGCAGTGTTCTCAGGACAGTCTCCTCACCTTCCAGCCACCGACCGGGCATTCAATTaGGCTGTTGCTTGGGGATTT +
Preference number: 5 (lower is better)
Translates to: SHRRGAVFSGQSPHLPATDRAFN*AVAWGF
Trigger: AAATCCCCAAGCAACAGCCAAATTGAATGCCCGGTC...GGTGGCTGGAAGGTGAGGAGACTGTCCTGAGAACACTGCCCCTCTTCTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGTGCCGGGGAACCCTTaGGTCTTCTCCTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAVPGNP*VFSCPF
Trigger: AAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCAC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS GCA 90 bp CAGCGTCTGTTCTTTCCTTCTGTGAGTGAGGTAGTAATACCAGAGTaGCAGCATGGGAAGGGAGGTCAGAACCACCACCCCCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: QRLFFPSVSEVVIPE*QHGKGGQNHHPQQE
Trigger: TTCCTGCTGGGGGTGGTGGTTCTGACCTCCCTTCCCATGCTGGCACTCTGGTATTACTACCTCACTCACAGAAGGAAAGAACAGACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp AAAAGAAGGAAGTCAGGCAGGCAGATATCAGTATTACATAGACTCTTACTGGAAGGGCCCCACGCGCCCTaGGGGGACCACTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: KRRKSGRQISVLHRLLLEGPHAP*GDHFPQ
Trigger: CTGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCCC...TTCCAGTAAGAGTCTATGTAATACTGATATCTGCCTGCCTGACTTCCTTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCGTACTAGCTGGCACTaGGCACACCAGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRARTSWH*AHQSSF
Trigger: GAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTACG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 90 bp TTGGGGGACCACTTCCCGCAGGAACACATAGTACATGTAGCCCAGTaGGAACAGCCCGAGGCTCAGGAAAAACAGCGTCTGTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LGDHFPQEHIVHVAQ*EQPEAQEKQRLFFP
Trigger: AGGAAAGAACAGACGCTGTTTTTCCTGAGCCTCGGGCTGTTCTCACTGGGCTACATGTACTATGTGTTCCTGCGGGAAGTGGTCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGCCTTCATCGAGGTCTaGACAATCACACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: AWTLTCEMERTGMSRRAAAFIEV*TITQTG
Trigger: GCCTGTTTGTGTGATTGTCAAGACCTCGATGAAGGC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp GCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCGGACCGGGCATTCAATTaGGCTGTTGCTTGGGGATTT +
Preference number: 5 (lower is better)
Translates to: AWTLTCEMERTGMSRRAADRAFN*AVAWGF
Trigger: AAATCCCCAAGCAACAGCCAAATTGAATGCCCGGTC...CGCAGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 90 bp GCCCGAGGCTCAGGAAAAACAGCGTCTGTTCTTTCCTTCTGTGAGTaGGGTAGTAATACCAGAGTGCCAGCATGGGAAGGGAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: ARGSGKTASVLSFCE*GSNTRVPAWEGRSE
Trigger: TTCTGACCTCCCTTCCCATGCTGGCACTCTGGTATTACTACCTCACTCACAGAAGGAAAGAACAGACGCTGTTTTTCCTGAGCCTCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTGCCTTCATCGAGGTCTaGACAATCACACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAAFIEV*TITQTG
Trigger: GCCTGTTTGTGTGATTGTCAAGACCTCGATGAAGGC...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp CGTGCTGCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACCTAATATTAACCTTTTaGGCTCCTCTGAGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: RAALPEDQVQFSVPRIADLILTF*APLSQG
Trigger: TCCTTGGCTCAGAGGAGCCAAAAAGGTTAATATTAG...GTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGCAGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS TCA 90 bp GTCAGAAATTGTATCCGTGATTCTTTCGCAAGTCTCCGGCCGAAGTaGTTGACAGGTAAGCCATCTGTCACAGCCTTCATCGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VRNCIRDSFASLRPK*LTGKPSVTAFIEVL
Trigger: CAAGACCTCGATGAAGGCTGTGACAGATGGCTTACCTGTCAATCACTTCGGCCGGAGACTTGCGAAAGAATCACGGATACAATTTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCTAATATTAACCTTTTaGGCTCCTCTGAGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRALILTF*APLSQG
Trigger: TCCTTGGCTCAGAGGAGCCAAAAAGGTTAATATTAG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp CCTGCATGGACACTGACGTGTGAAATGGAAAGGACAGGAATGTCCCGCAGAGCTCATTCAATTTGGCTGTaGCTTGGGGATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: PAWTLTCEMERTGMSRRAHSIWL*LGDLSL
Trigger: CAATGACAAATCCCCAAGCAACAGCCAAATTGAATG...AGCTCTGCGGGACATTCCTGTCCTTTCCATTTCACACGTCAGTGTCCATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036321.14
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS-3UTR CAA 90 bp GCTCTTCCAGAGGACCAAGTTCAGTTCTCAGTGCCCAGGATAGCTGACTCATGGCATTCAATTTGGCTGTaGCTTGGGGATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: ALPEDQVQFSVPRIADSWHSIWL*LGDLSL
Trigger: CAATGACAAATCCCCAAGCAACAGCCAAATTGAATG...CCATGAGTCAGCTATCCTGGGCACTGAGAACTGAACTTGGTCCTCTGGAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS TCA 90 bp AGTGAGCAAGAAGATGGAAAGGGCAAGTATAAATGCTTGATGGTTTaGTTCTCCGACGCAGCAGACACAATGATGGTCCATTCTCCGTAC +
Preference number: 5 (lower is better)
Translates to: SEQEDGKGKYKCLMV*FSDAADTMMVHSPY
Trigger: GTACGGAGAATGGACCATCATTGTGTCTGCTGCGTCGGAGAATCAAACCATCAAGCATTTATACTTGCCCTTTCCATCTTCTTGCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036321.14
CDS-3UTR CAA 90 bp CATTCAAGAGACATGAAAACTACCAATTTCTGCCCACATACGCTGTCTTTGACAGCCTTCATCGAGGTCTaGACAATCACACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: HSRDMKTTNFCPHTLSLTAFIEV*TITQTG
Trigger: GCCTGTTTGTGTGATTGTCAAGACCTCGATGAAGGC...TGTCAAAGACAGCGTATGTGGGCAGAAATTGGTAGTTTTCATGTCTCTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231700.2
CDS TCA 90 bp AGTGAGCAAGAAGATGGAAAGGGCAAGTATAAATGCTTGATGGTTTaGTTCTCCGACGCAGCTATTTATCCAGACACAATGATGGTCCAT +
Preference number: 5 (lower is better)
Translates to: SEQEDGKGKYKCLMV*FSDAAIYPDTMMVH
Trigger: ATGGACCATCATTGTGTCTGGATAAATAGCTGCGTCGGAGAATCAAACCATCAAGCATTTATACTTGCCCTTTCCATCTTCTTGCTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165648.2
ENSMUST00000231700.2
CDS CAA 90 bp GTGCCCAGGGTGGAGAACTGGAGCCAGTTGCGCAGGAAGCCCCTGTaGTACTGGCCTGTGTCCACGATGAGCCCGCAGAGGAGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: VPRVENWSQLRRKPL*YWPVSTMSPQRSRR
Trigger: GCGCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 72 bp TCAGAAGTAACCCGCAGGTTAGGAGGGCCAGCTGAGTaGGCCCCACGCGCCCTTGGGGGACCACTTCCCGCA +
Preference number: 6 (lower is better)
Translates to: SEVTRRLGGPAE*APRALGGPLPA
Trigger: TGCGGGAAGTGGTCCCCCAAGGGCGCGTGGGGCCCACTCAGCTGGCCCTCCTAACCTGCGGGTTACTTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 72 bp ACGATGAGCCCGCAGAGGAGCCGGCGCCCTGTCTTCTaGCGAAGGGCCTGCTGCACTTCCCTCTCCGTTACA +
Preference number: 6 (lower is better)
Translates to: TMSPQRSRRPVF*RRACCTSLSVT
Trigger: TGTAACGGAGAGGGAAGTGCAGCAGGCCCTTCGCCAGAAGACAGGGCGCCGGCTCCTCTGCGGGCTCATCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 72 bp AGTATCAGAAGTAACCCGCAGGTTAGGAGGGCCAGCTaGGTGGGCCCCACGCGCCCTTGGGGGACCACTTCC +
Preference number: 6 (lower is better)
Translates to: SIRSNPQVRRAS*VGPTRPWGTTS
Trigger: GGAAGTGGTCCCCCAAGGGCGCGTGGGGCCCACTCAGCTGGCCCTCCTAACCTGCGGGTTACTTCTGATACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CAA 90 bp GGGGTGTGGACTGTGTGTGTGCCCAGGGTGGAGAACTGGAGCCAGTaGCGCAGGAAGCCCCTGTTGTACTGGCCTGTGTCCACGATGAGC +
Preference number: 6 (lower is better)
Translates to: GVWTVCVPRVENWSQ*RRKPLLYWPVSTMS
Trigger: GCTCATCGTGGACACAGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTGGGCACACACACAGTCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CAA 90 bp CATATCCGGCAATGCCATGCCCGGGCGGGTCGTACTAGCTGGCACTaGGCACACCAGTCTTCCTTCACTTTGGCAGGGCTGTCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: HIRQCHARAGRTSWH*AHQSSFTLAGLSSP
Trigger: GGGGCTTGACAGCCCTGCCAAAGTGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTACGACCCGCCCGGGCATGGCATTGCCGGATATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS GCA 72 bp CTGTGTGTGTGCCCAGGGTGGAGAACTGGAGCCAGTTaGGCAGGAAGCCCCTGTTGTACTGGCCTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: LCVCPGWRTGAS*AGSPCCTGLCP
Trigger: TGGACACAGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTGGGCACACACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CAA 72 bp CAATGCCATGCCCGGGCGGGTCGTACTAGCTGGCACTaGGCACACCAGTCTTCCTTCACTTTGGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: QCHARAGRTSWH*AHQSSFTLAGL
Trigger: CAGCCCTGCCAAAGTGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTACGACCCGCCCGGGCATGGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CAA 90 bp GCGGGTCGTACTAGCTGGCACTTGGCACACCAGTCTTCCTTCACTTaGGCAGGGCTGTCAAGCCCCACCCTGGAGGAACCCCTAACATCG +
Preference number: 6 (lower is better)
Translates to: AGRTSWHLAHQSSFT*AGLSSPTLEEPLTS
Trigger: CGATGTTAGGGGTTCCTCCAGGGTGGGGCTTGACAGCCCTGCCAAAGTGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTACGACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CCA 72 bp AATGCCATGCCCGGGCGGGTCGTACTAGCTGGCACTTaGCACACCAGTCTTCCTTCACTTTGGCAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: NAMPGRVVLAGT*HTSLPSLWQGC
Trigger: ACAGCCCTGCCAAAGTGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTACGACCCGCCCGGGCATGGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS GCA 72 bp TCCATTCTCCGTACACAGATACCGCATATCCGGCAATaGCATGCCCGGGCGGGTCGTACTAGCTGGCACTTG +
Preference number: 6 (lower is better)
Translates to: SILRTQIPHIRQ*HARAGRTSWHL
Trigger: CAAGTGCCAGCTAGTACGACCCGCCCGGGCATGGCATTGCCGGATATGCGGTATCTGTGTACGGAGAATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 72 bp CACTTCCCGCAGGAACACATAGTACATGTAGCCCAGTaGGAACAGCCCGAGGCTCAGGAAAAACAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: HFPQEHIVHVAQ*EQPEAQEKQRL
Trigger: CAGACGCTGTTTTTCCTGAGCCTCGGGCTGTTCTCACTGGGCTACATGTACTATGTGTTCCTGCGGGAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 72 bp GCCAAGGAATTCGGAGGCGGTCAGAAATTGTATCCGTaGTTCTTTCGCAAGTCTCCGGCCGAAGTGATTGAC +
Preference number: 6 (lower is better)
Translates to: AKEFGGGQKLYP*FFRKSPAEVID
Trigger: GTCAATCACTTCGGCCGGAGACTTGCGAAAGAATCACGGATACAATTTCTGACCGCCTCCGAATTCCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 72 bp CAGGTAAGCCATCTGTCACAGCCTTCATCGAGGTCTTaGCAATCACACAAACAGGCAGCCACGTGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: QVSHLSQPSSRS*QSHKQAATWFF
Trigger: AAAGAACCACGTGGCTGCCTGTTTGTGTGATTGTCAAGACCTCGATGAAGGCTGTGACAGATGGCTTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CAA 72 bp ACAGGTAAGCCATCTGTCACAGCCTTCATCGAGGTCTaGACAATCACACAAACAGGCAGCCACGTGGTTCTT +
Preference number: 6 (lower is better)
Translates to: TGKPSVTAFIEV*TITQTGSHVVL
Trigger: AAGAACCACGTGGCTGCCTGTTTGTGTGATTGTCAAGACCTCGATGAAGGCTGTGACAGATGGCTTACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS CAA 72 bp AGCACAAGTGGAGGGACGATGCTAATATTAACCTTTTaGGCTCCTCTGAGCCAAGGAATTCGGAGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: STSGGTMLILTF*APLSQGIRRRS
Trigger: TGACCGCCTCCGAATTCCTTGGCTCAGAGGAGCCAAAAAGGTTAATATTAGCATCGTCCCTCCACTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 72 bp AAGAGGGCTGTGAAGAGGCTTCTATCCCAGACACAATaGTGGTCCATTCTCCGTACACAGATACCGCATATC +
Preference number: 6 (lower is better)
Translates to: KRAVKRLLSQTQ*WSILRTQIPHI
Trigger: GATATGCGGTATCTGTGTACGGAGAATGGACCATCATTGTGTCTGGGATAGAAGCCTCTTCACAGCCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232055.2
CDS CAA 90 bp ACCGGCAAAAGCACAAGTGGAGGGACGATGCTAATATTAACCTTTTaGGCTCCTCTGAGCCAAGGAATTCGGAGGCGGTCAGAAATTGTA +
Preference number: 6 (lower is better)
Translates to: TGKSTSGGTMLILTF*APLSQGIRRRSEIV
Trigger: TACAATTTCTGACCGCCTCCGAATTCCTTGGCTCAGAGGAGCCAAAAAGGTTAATATTAGCATCGTCCCTCCACTTGTGCTTTTGCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 72 bp ATTCAATTTGGCTGTTGCTTGGGGATTTGTCATTGCTaGGGTAGCCTGGATTCTTCTTGGCTCGGTACAAGG +
Preference number: 6 (lower is better)
Translates to: IQFGCCLGICHC*GSLDSSWLGTR
Trigger: CCTTGTACCGAGCCAAGAAGAATCCAGGCTACCTCAGCAATGACAAATCCCCAAGCAACAGCCAAATTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036321.14
ENSMUST00000165648.2
ENSMUST00000231700.2
ENSMUST00000232055.2
CDS TCA 72 bp GAAGATGGAAAGGGCAAGTATAAATGCTTGATGGTTTaGTTCTCCGACGCAGCAGACACAATGATGGTCCAT +
Preference number: 6 (lower is better)
Translates to: EDGKGKYKCLMV*FSDAADTMMVH
Trigger: ATGGACCATCATTGTGTCTGCTGCGTCGGAGAATCAAACCATCAAGCATTTATACTTGCCCTTTCCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036321.14
CDS TCA 72 bp GTGAGCAAGAAGATGGAAAGGGCAAGTATAAATGCTTaGTGGTTTGATTCTCCGACGCAGCTATTTATCCAG +
Preference number: 6 (lower is better)
Translates to: VSKKMERASINA*WFDSPTQLFIQ
Trigger: CTGGATAAATAGCTGCGTCGGAGAATCAAACCATCAAGCATTTATACTTGCCCTTTCCATCTTCTTGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165648.2
ENSMUST00000231700.2
CDS TCA 72 bp GAAGATGGAAAGGGCAAGTATAAATGCTTGATGGTTTaGTTCTCCGACGCAGCTATTTATCCAGACACAATG +
Preference number: 6 (lower is better)
Translates to: EDGKGKYKCLMV*FSDAAIYPDTM
Trigger: CATTGTGTCTGGATAAATAGCTGCGTCGGAGAATCAAACCATCAAGCATTTATACTTGCCCTTTCCATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165648.2
ENSMUST00000231700.2