Pregenerated sensors for ZDHHC21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028403Ensembl transcript IDs: ENSMUST00000030110.15, ENSMUST00000107239.8, ENSMUST00000139401.2, ENSMUST00000173741.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCCTCTAACCGACAGCCTACAAACAACCAGACCCTGTGCTGAGTaGAACAGGCAAGCAAAGCCCAGAGGAGGCATGCCTGTGGCCCCG | + |
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Preference number: 1 (lower is better) Translates to: FPLTDSLQTTRPCAE*NRQAKPRGGMPVAP Trigger: CGGGGCCACAGGCATGCCTCCTCTGGGCTTTGCTTGCCTGTTTCACTCAGCACAGGGTCTGGTTGTTTGTAGGCTGTCGGTTAGAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CCA 90 bp | GGCTGTGCAGGTACCTCTACAGTGACGTGGCGTCAGCGACAGTGCTaGCTATCACAGCTGTCTCTAGTCAGCTCTTTTCAGATGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GCAGTSTVTWRQRQC*LSQLSLVSSFQMLA Trigger: AGCCAGCATCTGAAAAGAGCTGACTAGAGACAGCTGTGATAGCCAGCACTGTCGCTGACGCCACGTCACTGTAGAGGTACCTGCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR GCA 90 bp | AATCCCGTGGCAACACAGGTACAAGAGCCGGGGCAGCCCTCCCTCTaGTTTCTATCATATTTGCTCATCTATGCACACGAGCGTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: NPVATQVQEPGQPSL*FLSYLLIYAHERVT Trigger: GGTGACACGCTCGTGTGCATAGATGAGCAAATATGATAGAAAGCAGAGGGAGGGCTGCCCCGGCTCTTGTACCTGTGTTGCCACGGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR GCA 90 bp | AATGGCTGTGCAGGTACCTCTACAGTGACGTGGCGTCAGCGACAGTaGTGGCTATCACAGCTGTCTCTAGTCAGCTCTTTTCAGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: NGCAGTSTVTWRQRQ*WLSQLSLVSSFQML Trigger: CAGCATCTGAAAAGAGCTGACTAGAGACAGCTGTGATAGCCAGCACTGTCGCTGACGCCACGTCACTGTAGAGGTACCTGCACAGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CCA 90 bp | CCAGAAGTGGTACATGTAAGCAGACCAAACCCACGAACTCCAGCATaGGGAAGGGATCACGCCCGTTACCTTGTGTCAGAGCTACTACTG | + |
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Preference number: 1 (lower is better) Translates to: PEVVHVSRPNPRTPA*GRDHARYLVSELLL Trigger: CAGTAGTAGCTCTGACACAAGGTAACGGGCGTGATCCCTTCCCCATGCTGGAGTTCGTGGGTTTGGTCTGCTTACATGTACCACTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR GCA 90 bp | AGGTACAAGAGCCGGGGCAGCCCTCCCTCTGCTTTCTATCATATTTaGTCATCTATGCACACGAGCGTGTCACCTTTCAAGAATCGATTC | + |
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Preference number: 1 (lower is better) Translates to: RYKSRGSPPSAFYHI*SSMHTSVSPFKNRF Trigger: GAATCGATTCTTGAAAGGTGACACGCTCGTGTGCATAGATGAGCAAATATGATAGAAAGCAGAGGGAGGGCTGCCCCGGCTCTTGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR TCA 90 bp | CCCGCCTGTATGTCCCTCCCTCTCCTCAAAGGACTCACAGTTCTCTaGCCTACTCTCTTCCTTATTACCACTAGCACTGGAAATGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: PACMSLPLLKGLTVL*PTLFLITTSTGNVS Trigger: ACTAACATTTCCAGTGCTAGTGGTAATAAGGAAGAGAGTAGGTCAGAGAACTGTGAGTCCTTTGAGGAGAGGGAGGGACATACAGGCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR GCA 90 bp | CACAGGATCTTCCAACGAGTGCCAAAAACTTCTGAGAAGGTCTGCTaGCATGGCTTTCGGGGCCGCGATATTTCTTCACAACAATTTGAC | + |
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Preference number: 1 (lower is better) Translates to: HRIFQRVPKTSEKVC*HGFRGRDISSQQFD Trigger: GTCAAATTGTTGTGAAGAAATATCGCGGCCCCGAAAGCCATGGCAGCAGACCTTCTCAGAAGTTTTTGGCACTCGTTGGAAGATCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
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| 3UTR TCA 90 bp | GCTGGGCTTTCGTTTGGCTCTGCTTTGGATGCTCCAGGTCTTGAGTaGACTGAATATATACAGCTGAAGGCATTCAACTTCTACCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: AGLSFGSALDAPGLE*TEYIQLKAFNFYLP Trigger: TGGGAGGTAGAAGTTGAATGCCTTCAGCTGTATATATTCAGTTCACTCAAGACCTGGAGCATCCAAAGCAGAGCCAAACGAAAGCCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR TCA 90 bp | CTGCTTTGGATGCTCCAGGTCTTGAGTGAACTGAATATATACAGCTaGAGGCATTCAACTTCTACCTCCCAACAGTCTATGTACACCACT | + |
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Preference number: 1 (lower is better) Translates to: LLWMLQVLSELNIYS*RHSTSTSQQSMYTT Trigger: AGTGGTGTACATAGACTGTTGGGAGGTAGAAGTTGAATGCCTTCAGCTGTATATATTCAGTTCACTCAAGACCTGGAGCATCCAAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR TCA 90 bp | ACAGTTGAGCAACTATGGGAAACACTACTTTTACACATGAGGAAATaGAGGGCTTCAGAAATGAAGACCTCTAGGGTCTCACGAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TVEQLWETLLLHMRK*RASEMKTSRVSRSP Trigger: TGGGCTTCGTGAGACCCTAGAGGTCTTCATTTCTGAAGCCCTTCATTTCCTCATGTGTAAAAGTAGTGTTTCCCATAGTTGCTCAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR TCA 90 bp | CACTGCAAAACCATATATTGCATCAACCCTCAAGGAGACACGGACTaGAGCGAATGGAAAGGACACAAGCATTTTCAGTGTGACTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: HCKTIYCINPQGDTD*SEWKGHKHFQCDCL Trigger: TAGACAGTCACACTGAAAATGCTTGTGTCCTTTCCATTCGCTTCAGTCCGTGTCTCCTTGAGGGTTGATGCAATATATGGTTTTGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CCA 90 bp | AATCTCTCAAGAGCATCTGGCCAGCTAAGGAGAAAGAACATTAAGTaGAGATCAAACAGCTCAAACCAAATGCTTCCCACAATGGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: NLSRASGQLRRKNIK*RSNSSNQMLPTMAV Trigger: CACAGCCATTGTGGGAAGCATTTGGTTTGAGCTGTTTGATCTCCACTTAATGTTCTTTCTCCTTAGCTGGCCAGATGCTCTTGAGAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CCA 90 bp | GATTCTGAACCCAGCCCTTTGTTACCTACATCAAGCTTATCCAATTaGATATCAGAAACGTTTGTGTGTGCTGTGTGTGAGGCGATGAAT | + |
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Preference number: 1 (lower is better) Translates to: DSEPSPLLPTSSLSN*ISETFVCAVCEAMN Trigger: ATTCATCGCCTCACACACAGCACACACAAACGTTTCTGATATCCAATTGGATAAGCTTGATGTAGGTAACAAAGGGCTGGGTTCAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CCA 90 bp | ACAGTTGCTTGTAGGAAAATAACCCAAAGTCTCATTAAGAATAGCTaGAATGAGCCACCGTCCTTCATGGAACCACTTCTGCACATTAAT | + |
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Preference number: 1 (lower is better) Translates to: TVACRKITQSLIKNS*NEPPSFMEPLLHIN Trigger: ATTAATGTGCAGAAGTGGTTCCATGAAGGACGGTGGCTCATTCCAGCTATTCTTAATGAGACTTTGGGTTATTTTCCTACAAGCAACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR TCA 90 bp | AGATCTTGTATTAGTCCCACAACAGGATCAAGATCACTATTAAAATaGAGCCTGGGGCACATTATGATGCCTAAGATTGGTAGGTGGATT | + |
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Preference number: 1 (lower is better) Translates to: RSCISPTTGSRSLLK*SLGHIMMPKIGRWI Trigger: AATCCACCTACCAATCTTAGGCATCATAATGTGCCCCAGGCTTCATTTTAATAGTGATCTTGATCCTGTTGTGGGACTAATACAAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR TCA 90 bp | GGTAACAAAGACTCCTTAGTAGACTGTTTAATGCTTAGGAGATTCTaGACCCAGCCCTTTGTTACCTACATCAAGCTTATCCAATTGGAT | + |
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Preference number: 1 (lower is better) Translates to: GNKDSLVDCLMLRRF*TQPFVTYIKLIQLD Trigger: ATCCAATTGGATAAGCTTGATGTAGGTAACAAAGGGCTGGGTTCAGAATCTCCTAAGCATTAAACAGTCTACTAAGGAGTCTTTGTTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR TCA 90 bp | GAAATTAAGCTGTCAATAGACTGTTCACTTCTTCAGACACAGATGTaGGAAGCTCTCAGTCAACCAAAAAGAAAACTAATTCTTTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: EIKLSIDCSLLQTQM*EALSQPKRKLILWF Trigger: GAACCAAAGAATTAGTTTTCTTTTTGGTTGACTGAGAGCTTCTCACATCTGTGTCTGAAGAAGTGAACAGTCTATTGACAGCTTAATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCACTGCTCTGAGAAGGTCTGCTaGCATGGCTTTCGGGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: VLRRRKKGIRELLLARHCSEKVC*HGFRGR Trigger: GCGGCCCCGAAAGCCATGGCAGCAGACCTTCTCAGA...GCAGTGCCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCACTGCCTCCTAGCCAGGCACTaGCCCTTGTTGCTCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLRRRKKGIRELLLARHCLLARH*PLLLTA Trigger: TGCAGTGAGCAACAAGGGGCAGTGCCTGGCTAGGAG...GCAGTGCCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCGCAGTGGTTGCCGCTaGCTGAAAGGAATGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: SVVLRRRKKGIRELLLARRSGCR*LKGMNH Trigger: GTGGTTCATTCCTTTCAGGCAGCGGCAACCACTGCG...CCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAACCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
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| 3UTR CAA 90 bp | CAGGTACAAGAGCCGGGGCAGCCCTCCCTCTGCTTTCTATCATATTaGCTCATCTATGCACACGAGCGTGTCACCTTTCAAGAATCGATT | + |
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Preference number: 2 (lower is better) Translates to: QVQEPGQPSLCFLSY*LIYAHERVTFQESI Trigger: AATCGATTCTTGAAAGGTGACACGCTCGTGTGCATAGATGAGCAAATATGATAGAAAGCAGAGGGAGGGCTGCCCCGGCTCTTGTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CAA 90 bp | ATCTGTTTAGACGTGATTGGCAAAGTGGTAGGGAACTCGCAGTGGTaGCCGCTGCCTGAAAGGAATGAACCACAGGATCTTCCAACGAGT | + |
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Preference number: 2 (lower is better) Translates to: ICLDVIGKVVGNSQW*PLPERNEPQDLPTS Trigger: ACTCGTTGGAAGATCCTGTGGTTCATTCCTTTCAGGCAGCGGCAACCACTGCGAGTTCCCTACCACTTTGCCAATCACGTCTAAACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAACAGAGAAGCCAATCGTAAGCAGCAGCAGACACCTGGACAAGTCCATAATTTTCACGGATGCTaGGCAGCAGCACCCAAACTG | + |
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Preference number: 2 (lower is better) Translates to: RKNREANRKQQQTPGQVHNFHGC*AAAPKL Trigger: CAGTTTGGGTGCTGCTGCTCAGCATCCGTGAAAATT...ATGGACTTGTCCAGGTGTCTGCTGCTGCTTACGATTGGCTTCTCTGTTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CAA 90 bp | ACTTGCCAGGCTAACTCCATGCTCCCTCTGTTTTCCTGTCTGTCCTaGGGCTTACAACCCATTCATCCTATACCTCTGACTGGGATGAAT | + |
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Preference number: 2 (lower is better) Translates to: TCQANSMLPLFSCLS*GLQPIHPIPLTGMN Trigger: ATTCATCCCAGTCAGAGGTATAGGATGAATGGGTTGTAAGCCCAAGGACAGACAGGAAAACAGAGGGAGCATGGAGTTAGCCTGGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCACTGCGAATATAAACCTGACTaGTCACACATTTCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VLRRRKKGIRELLLARHCEYKPD*SHISPG Trigger: CCCAGGAGAAATGTGTGACCAGTCAGGTTTATATTC...GCAGTGCCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGAATTCACTGCAAAACCATATATTGCATCAACCCTCAAGGAGACACGGACCACGAACTCCAGCATaGGGAAGGGATCACGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: IQNSLQNHILHQPSRRHGPRTPA*GRDHAR Trigger: ACGGGCGTGATCCCTTCCCCATGCTGGAGTTCGTGG...TCCGTGTCTCCTTGAGGGTTGATGCAATATATGGTTTTGCAGTGAATTCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGAATTCACTGCAAAACCATATATTGCATCAACCCTCAAGGAGACACGGACTCCTAGCCAGGCACTaGCCCTTGTTGCTCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: IQNSLQNHILHQPSRRHGLLARH*PLLLTA Trigger: TGCAGTGAGCAACAAGGGGCAGTGCCTGGCTAGGAG...TCCGTGTCTCCTTGAGGGTTGATGCAATATATGGTTTTGCAGTGAATTCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAACAGAGAAGCCAATCGTAAGCAGCAGCAGACACCTGGACAAGTCCATACCTTTGTGTGTGTGTaGAAGGGGACAATCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RKNREANRKQQQTPGQVHTFVCV*KGTIPK Trigger: TTTTGGGATTGTCCCCTTCCACACACACACAAAGGT...ATGGACTTGTCCAGGTGTCTGCTGCTGCTTACGATTGGCTTCTCTGTTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAACAGAGAAGCCAATCGTAAGCAGCAGCAGACACCTGGACAAGTCCATTCTAAAAGCAATCAGTaGTTGCAGCAGAAGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: RKNREANRKQQQTPGQVHSKSNQ*LQQKGN Trigger: GTTTCCCTTCTGCTGCAATCACTGATTGCTTTTAGA...ATGGACTTGTCCAGGTGTCTGCTGCTGCTTACGATTGGCTTCTCTGTTCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR TCA 90 bp | GAGCTACTACTGCTCCAGAAGTATAAAGCAGTTTACAAAGCTCCACGCTGGGCTGCTCCAGGTCTTGAGTaGACTGAATATATACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ELLLLQKYKAVYKAPRWAAPGLE*TEYIQL Trigger: CAGCTGTATATATTCAGTTCACTCAAGACCTGGAGC...AGCCCAGCGTGGAGCTTTGTAAACTGCTTTATACTTCTGGAGCAGTAGTAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAACAGAGAAGCCAATCGTAAGCAGCAGCAGACACCTGGACAAGTCCATTATTCCCATGGTTACTaGGAGGGACAAATAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RKNREANRKQQQTPGQVHYSHGY*EGQIKR Trigger: CCTCTTTATTTGTCCCTCTCAGTAACCATGGGAATA...ATGGACTTGTCCAGGTGTCTGCTGCTGCTTACGATTGGCTTCTCTGTTCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR CAA 90 bp | GGGTCTCACGAAGCCCAACAGATCCCTTCCTTCATAACTGAGTCGTaGATTTTCTCTGGTGACTCAGTATTTCTTTGCCAAAAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: GSHEAQQIPSFITES*IFSGDSVFLCQKTP Trigger: AGGAGTCTTTTGGCAAAGAAATACTGAGTCACCAGAGAAAATCAACGACTCAGTTATGAAGGAAGGGATCTGTTGGGCTTCGTGAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAACAGAGAAGCCAATCGTAAGCAGCAGCAGACACCTGGACAAGTCCATTTACACATGAGGAAATaGAGGGCTTCAGAAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: RKNREANRKQQQTPGQVHLHMRK*RASEMK Trigger: CTTCATTTCTGAAGCCCTTCATTTCCTCATGTGTAA...ATGGACTTGTCCAGGTGTCTGCTGCTGCTTACGATTGGCTTCTCTGTTCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGAAGTAACTGGAATTATTGCAAACTTCCTACCCTCTTCAGTCATTAGAGGAACTCGCAGTGGTTaGCGCTGCCTGAAAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: LEEVTGIIANFLPSSVIRGTRSG*RCLKGM Trigger: CATTCCTTTCAGGCAGCGGCAACCACTGCGAGTTCC...TCTAATGACTGAAGAGGGTAGGAAGTTTGCAATAATTCCAGTTACTTCTTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAACAGGTTTTTCTCTAGGAATCTTTAGAGTGATTACAAACCCCTCCGGGCCTATAAGTATACACTaGCATGTATACCTCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: WPTGFSLGIFRVITNPSGPISIH*HVYLWH Trigger: ATGCCAGAGGTATACATGCCAGTGTATACTTATAGG...CCCGGAGGGGTTTGTAATCACTCTAAAGATTCCTAGAGAAAAACCTGTTGGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTATGATGCCTAAGATTGGTAGGTGGATTTTAATTGACTTGAAGACTGTCGCCTGGGGCACATTATaGTGCCTAAGATTGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: HIMMPKIGRWILIDLKTVAWGTL*CLRLVG Trigger: ACCTACCAATCTTAGGCATCATAATGTGCCCCAGGC...GACAGTCTTCAAGTCAATTAAAATCCACCTACCAATCTTAGGCATCATAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR TCA 90 bp | ATTACATCAATTAGCCAAAAGAGGGCGCAGAAAGAACATAGGAGCTTAATCCCTGCTCCAGGTCTTGAGTaGACTGAATATATACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ITSISQKRAQKEHRSLIPAPGLE*TEYIQL Trigger: CAGCTGTATATATTCAGTTCACTCAAGACCTGGAGC...AGGGATTAAGCTCCTATGTTCTTTCTGCGCCCTCTTTTGGCTAATTGATGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGAATTCACTGCAAAACCATATATTGCATCAACCCTCAAGGAGACACGGAGTTTTAAGGAAACCCTaGTGGTGTTTGCAGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IQNSLQNHILHQPSRRHGVLRKP*WCLQSF Trigger: GAAGCTCTGCAAACACCATCAGGGTTTCCTTAAAAC...TCCGTGTCTCCTTGAGGGTTGATGCAATATATGGTTTTGCAGTGAATTCTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
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| 3UTR-3UTR CCA 90 bp | TTATACATATGTTCCTATAAGTATACACTGGCATGTATACCTCTGGCATGTTCAAACGCATTTCCAGCATaGAGGACCCATCTGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LYICSYKYTLACIPLACSNAFPA*RTHLCP Trigger: TGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTT...TGAACATGCCAGAGGTATACATGCCAGTGTATACTTATAGGAACATATGTATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTAACAGGATAGTAAAAACCTCAAGAGCCAGGATAATTACATCAATTAGCGAATATAAACCTGACTaGTCACACATTTCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PTNRIVKTSRARIITSISEYKPD*SHISPG Trigger: CCCAGGAGAAATGTGTGACCAGTCAGGTTTATATTC...GCTAATTGATGTAATTATCCTGGCTCTTGAGGTTTTTACTATCCTGTTAGTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACTAACAGGATAGTAAAAACCTCAAGAGCCAGGATAATTACATCAATTAGCAGATCACTATTAAAATaGAGCCTGGGGCACATTATG | + |
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Preference number: 2 (lower is better) Translates to: PTNRIVKTSRARIITSISRSLLK*SLGHIM Trigger: CATAATGTGCCCCAGGCTTCATTTTAATAGTGATCT...GCTAATTGATGTAATTATCCTGGCTCTTGAGGTTTTTACTATCCTGTTAGTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR GCA 90 bp | TTATACATATGTTCCTATAAGTATACACTGGCATGTATACCTCTGGCATGTTCAGGATCTTCCAACGAGTaGCAAAAACTTCTGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LYICSYKYTLACIPLACSGSSNE*QKLLRR Trigger: CCTTCTCAGAAGTTTTTGGCACTCGTTGGAAGATCC...TGAACATGCCAGAGGTATACATGCCAGTGTATACTTATAGGAACATATGTATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCAGGATAATTACATCAATTAGCCAAAAGAGGGCGCAGAAAGAACATAGGCCTAAGATTGGTAGGTaGATTTTAATTGACTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RARIITSISQKRAQKEHRPKIGR*ILIDLK Trigger: CTTCAAGTCAATTAAAATCCACCTACCAATCTTAGG...CCTATGTTCTTTCTGCGCCCTCTTTTGGCTAATTGATGTAATTATCCTGGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| 3UTR-3UTR CCA 90 bp | TTATACATATGTTCCTATAAGTATACACTGGCATGTATACCTCTGGCATGTTCACTGTTTAGACGTGATTaGCAAAGTGGTAGGGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: LYICSYKYTLACIPLACSLFRRD*QSGREL Trigger: GAGTTCCCTACCACTTTGCCAATCACGTCTAAACAG...TGAACATGCCAGAGGTATACATGCCAGTGTATACTTATAGGAACATATGTATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCACTAACAGGATAGTAAAAACCTCAAGAGCCAGGATAATTACATCAATTAGCCCTAAGATTGGTAGGTaGATTTTAATTGACTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PTNRIVKTSRARIITSISPKIGR*ILIDLK Trigger: CTTCAAGTCAATTAAAATCCACCTACCAATCTTAGG...GCTAATTGATGTAATTATCCTGGCTCTTGAGGTTTTTACTATCCTGTTAGTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR TCA 72 bp | ACCGACAGCCTACAAACAACCAGACCCTGTGCTGAGTaGAACAGGCAAGCAAAGCCCAGAGGAGGCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TDSLQTTRPCAE*NRQAKPRGGMP Trigger: AGGCATGCCTCCTCTGGGCTTTGCTTGCCTGTTTCACTCAGCACAGGGTCTGGTTGTTTGTAGGCTGTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CCA 72 bp | GTACATGTAAGCAGACCAAACCCACGAACTCCAGCATaGGGAAGGGATCACGCCCGTTACCTTGTGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VHVSRPNPRTPA*GRDHARYLVSE Trigger: CTCTGACACAAGGTAACGGGCGTGATCCCTTCCCCATGCTGGAGTTCGTGGGTTTGGTCTGCTTACATGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR CCA 72 bp | GGTACCTCTACAGTGACGTGGCGTCAGCGACAGTGCTaGCTATCACAGCTGTCTCTAGTCAGCTCTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GTSTVTWRQRQC*LSQLSLVSSFQ Trigger: CTGAAAAGAGCTGACTAGAGACAGCTGTGATAGCCAGCACTGTCGCTGACGCCACGTCACTGTAGAGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | TCTAACCGACAGCCTACAAACAACCAGACCCTGTGCTaGGTGAAACAGGCAAGCAAAGCCCAGAGGAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SNRQPTNNQTLC*VKQASKAQRRH Trigger: ATGCCTCCTCTGGGCTTTGCTTGCCTGTTTCACTCAGCACAGGGTCTGGTTGTTTGTAGGCTGTCGGTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | GCAGGCCAAGGCCCTCAGACTTACACACAGTCCAGCTaGATGAAAGCACACCCAGCAAGTTTTAAGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AGQGPQTYTQSS*MKAHPASFKTG Trigger: CCCTGTCTTAAAACTTGCTGGGTGTGCTTTCATTCAGCTGGACTGTGTGTAAGTCTGAGGGCCTTGGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR GCA 72 bp | CAAACAGCTCAAACCAAATGCTTCCCACAATGGCTGTaGAGGTACCTCTACAGTGACGTGGCGTCAGCGACA | + |
|
Preference number: 3 (lower is better) Translates to: QTAQTKCFPQWL*RYLYSDVASAT Trigger: TGTCGCTGACGCCACGTCACTGTAGAGGTACCTGCACAGCCATTGTGGGAAGCATTTGGTTTGAGCTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CCA 72 bp | GGAGATCAAACAGCTCAAACCAAATGCTTCCCACAATaGCTGTGCAGGTACCTCTACAGTGACGTGGCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GDQTAQTKCFPQ*LCRYLYSDVAS Trigger: TGACGCCACGTCACTGTAGAGGTACCTGCACAGCCATTGTGGGAAGCATTTGGTTTGAGCTGTTTGATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | CCATCCAGAGGACTGCAGTCTGCCAGTTACATAATCTaGCTAATTTTCACGGATGCTGAGCAGCAGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: PSRGLQSASYII*LIFTDAEQQHP Trigger: TGGGTGCTGCTGCTCAGCATCCGTGAAAATTAGTCAGATTATGTAACTGGCAGACTGCAGTCCTCTGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | GTGATCAGCCGGGCAGCGTCTGTTTTAAGGAAACCCTaGTGGTGTTTGCAGAGCTTCAAAGGAAGAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VISRAASVLRKP*WCLQSFKGRTE Trigger: CTCTGTTCTTCCTTTGAAGCTCTGCAAACACCATCAGGGTTTCCTTAAAACAGACGCTGCCCGGCTGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR GCA 72 bp | TTCCAACGAGTGCCAAAAACTTCTGAGAAGGTCTGCTaGCATGGCTTTCGGGGCCGCGATATTTCTTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: FQRVPKTSEKVC*HGFRGRDISSQ Trigger: TTGTGAAGAAATATCGCGGCCCCGAAAGCCATGGCAGCAGACCTTCTCAGAAGTTTTTGGCACTCGTTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
||
| 3UTR CCA 72 bp | CTCCAGAAGTATAAAGCAGTTTACAAAGCTCCACGCTaGGCTTTCGTTTGGCTCTGCTTTGGATGCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQKYKAVYKAPR*AFVWLCFGCSR Trigger: CCTGGAGCATCCAAAGCAGAGCCAAACGAAAGCCCAGCGTGGAGCTTTGTAAACTGCTTTATACTTCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR GCA 72 bp | GGGATCACGCCCGTTACCTTGTGTCAGAGCTACTACTaGTCCAGAAGTATAAAGCAGTTTACAAAGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GITPVTLCQSYY*SRSIKQFTKLH Trigger: GTGGAGCTTTGTAAACTGCTTTATACTTCTGGAGCAGTAGTAGCTCTGACACAAGGTAACGGGCGTGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR GCA 72 bp | AGCAGCACCCAAACTGCTTCTGATGTGAAGTTCAACTaGCAGGGTGTTTGCTCAAGTCAACGTACCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSTQTASDVKFN*QGVCSSQRTFG Trigger: TCCAAAGGTACGTTGACTTGAGCAAACACCCTGGCAGTTGAACTTCACATCAGAAGCAGTTTGGGTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR GCA 72 bp | GTGTGTCAAGTGATTAAACTTGCCAGGCTAACTCCATaGTCCCTCTGTTTTCCTGTCTGTCCTTGGGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: VCQVIKLARLTP*SLCFPVCPWAY Trigger: GTAAGCCCAAGGACAGACAGGAAAACAGAGGGAGCATGGAGTTAGCCTGGCAAGTTTAATCACTTGACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGAAAGAACATAGGAGCTTAATCCCTAGGAAATGGCCAACAGGTTTTTCTGAGTCGTCTGTGGTTTaGAGAAGGAGAAAGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AQKEHRSLIPRKWPTGFSESSVV*RRRKKG Trigger: GCCCTTCTTTCTCCTTCTCAAAACCACAGACGACTC...AGAAAAACCTGTTGGCCATTTCCTAGGGATTAAGCTCCTATGTTCTTTCTGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR GCA 72 bp | AGACACCTGGACAAGTCCATCCAGAGGACTGCAGTCTaGCAGTTACATAATCTGACTAATTTTCACGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: RHLDKSIQRTAV*QLHNLTNFHGC Trigger: GCATCCGTGAAAATTAGTCAGATTATGTAACTGGCAGACTGCAGTCCTCTGGATGGACTTGTCCAGGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCAGGATAATTACATCAATTAGCCAAAAGAGGGCGCAGAAAGAACATAGGGAGTCGTCTGTGGTTTaGAGAAGGAGAAAGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RARIITSISQKRAQKEHRESSVV*RRRKKG Trigger: GCCCTTCTTTCTCCTTCTCAAAACCACAGACGACTC...CCTATGTTCTTTCTGCGCCCTCTTTTGGCTAATTGATGTAATTATCCTGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR GCA 72 bp | TACAGCAAATGCCTTTCTGTATGGAGCCACCTTGCGTaGCCAATTCTAATTGTTTACCAAGTATCTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YSKCLSVWSHLA*PILIVYQVSAA Trigger: GGCTGCAGATACTTGGTAAACAATTAGAATTGGGCACGCAAGGTGGCTCCATACAGAAAGGCATTTGCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR GCA 72 bp | CGTGTACAGCAAATGCCTTTCTGTATGGAGCCACCTTaGGTGCCCAATTCTAATTGTTTACCAAGTATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVQQMPFCMEPP*VPNSNCLPSIC Trigger: GCAGATACTTGGTAAACAATTAGAATTGGGCACGCAAGGTGGCTCCATACAGAAAGGCATTTGCTGTACACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR GCA 72 bp | GCCCTCCCTCTGCTTTCTATCATATTTGCTCATCTATaGACACGAGCGTGTCACCTTTCAAGAATCGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALPLLSIIFAHL*TRACHLSRIDS Trigger: AGAATCGATTCTTGAAAGGTGACACGCTCGTGTGCATAGATGAGCAAATATGATAGAAAGCAGAGGGAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CCA 72 bp | ACGAGTAGGTTAAAATATCACCCATCCACACTGGTGTaGACACAGAGCTATCAGTATGCAGATGCATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TSRLKYHPSTLV*TQSYQYADASS Trigger: GGAAGATGCATCTGCATACTGATAGCTCTGTGTCCACACCAGTGTGGATGGGTGATATTTTAACCTACTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | TCGTTTGGCTCTGCTTTGGATGCTCCAGGTCTTGAGTaGACTGAATATATACAGCTGAAGGCATTCAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFGSALDAPGLE*TEYIQLKAFNF Trigger: GAAGTTGAATGCCTTCAGCTGTATATATTCAGTTCACTCAAGACCTGGAGCATCCAAAGCAGAGCCAAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR GCA 72 bp | AGAACATTAAGTGGAGATCAAACAGCTCAAACCAAATaGTTCCCACAATGGCTGTGCAGGTACCTCTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RTLSGDQTAQTK*FPQWLCRYLYS Trigger: ACTGTAGAGGTACCTGCACAGCCATTGTGGGAAGCATTTGGTTTGAGCTGTTTGATCTCCACTTAATGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CCA 72 bp | CCCAGCCCTTTGTTACCTACATCAAGCTTATCCAATTaGATATCAGAAACGTTTGTGTGTGCTGTGTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSPLLPTSSLSN*ISETFVCAVCE Trigger: CTCACACACAGCACACACAAACGTTTCTGATATCCAATTGGATAAGCTTGATGTAGGTAACAAAGGGCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | ATGCTCCAGGTCTTGAGTGAACTGAATATATACAGCTaGAGGCATTCAACTTCTACCTCCCAACAGTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: MLQVLSELNIYS*RHSTSTSQQSM Trigger: CATAGACTGTTGGGAGGTAGAAGTTGAATGCCTTCAGCTGTATATATTCAGTTCACTCAAGACCTGGAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR CCA 72 bp | CTTGGGCTTACAACCCATTCATCCTATACCTCTGACTaGGATGAATTTCTTCCTTCTGTGTCATTAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGLTTHSSYTSD*DEFLPSVSLVA Trigger: AGCAACTAATGACACAGAAGGAAGAAATTCATCCCAGTCAGAGGTATAGGATGAATGGGTTGTAAGCCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CCA 72 bp | TCAAGCAGTGCTTTTCAATTAGGGATATGGGAGAATTaGAGCAGACAGCAAATACTTGGAGCATCAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSAFQLGIWEN*SRQQILGASEW Trigger: CCATTCTGATGCTCCAAGTATTTGCTGTCTGCTCCAATTCTCCCATATCCCTAATTGAAAAGCACTGCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | CTGAGACCCCACATGGGTAGTTATTCCCATGGTTACTaGGAGGGACAAATAAAGAGGCTATTGAATAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LRPHMGSYSHGY*EGQIKRLLNNL Trigger: TAGATTATTCAATAGCCTCTTTATTTGTCCCTCTCAGTAACCATGGGAATAACTACCCATGTGGGGTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | ATTAGTCCCACAACAGGATCAAGATCACTATTAAAATaGAGCCTGGGGCACATTATGATGCCTAAGATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ISPTTGSRSLLK*SLGHIMMPKIG Trigger: ACCAATCTTAGGCATCATAATGTGCCCCAGGCTTCATTTTAATAGTGATCTTGATCCTGTTGTGGGACTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR CCA 72 bp | TATGTTCCTATAAGTATACACTGGCATGTATACCTCTaGCATGTTCACAGATTGGCTATACAACCCACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: YVPISIHWHVYL*HVHRLAIQPTN Trigger: GTTAGTGGGTTGTATAGCCAATCTGTGAACATGCCAGAGGTATACATGCCAGTGTATACTTATAGGAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR TCA 72 bp | GTAGCAGAAATGCTAACTATTGGTTCATTTAGTCGGTaGCAATACTGGTATAAAGGACTTCATGTAAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAEMLTIGSFSR*QYWYKGLHVNS Trigger: GCTGTTTACATGAAGTCCTTTATACCAGTATTGTCACCGACTAAATGAACCAATAGTTAGCATTTCTGCTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR TCA 72 bp | CTGTCAATAGACTGTTCACTTCTTCAGACACAGATGTaGGAAGCTCTCAGTCAACCAAAAAGAAAACTAATT | + |
|
Preference number: 3 (lower is better) Translates to: LSIDCSLLQTQM*EALSQPKRKLI Trigger: AATTAGTTTTCTTTTTGGTTGACTGAGAGCTTCTCACATCTGTGTCTGAAGAAGTGAACAGTCTATTGACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR CCA 90 bp | CATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCCCGCAGCGGCTGCAGTaGTGGGAGCGCTTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKTCNAFPAWRTHLCPPSPQRLQ*WERFGL Trigger: GAGGCCGAAGCGCTCCCACCACTGCAGCCGCTGCGG...GGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR GCA 90 bp | CATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCAGTGGCCGCAGCGGCTaGAGTGGTGGGAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HKTCNAFPAWRTHLCPPSSGRSG*SGGSAS Trigger: CGAAGCGCTCCCACCACTGCAGCCGCTGCGGCCACT...GGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAACAGAGAAGCCAATCGTAAGCAGCAGCAGACACCTGGACAAGTCCATCCGCAGCGGCTGCAGTaGTGGGAGCGCTTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKNREANRKQQQTPGQVHPQRLQ*WERFGL Trigger: GAGGCCGAAGCGCTCCCACCACTGCAGCCGCTGCGG...ATGGACTTGTCCAGGTGTCTGCTGCTGCTTACGATTGGCTTCTCTGTTCTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR GCA 90 bp | CCGCTGCCTGAAAGGAATGAACCACAGGATCTTCCAACGAGTGCCAAAAACTTCAGTGGCCGCAGCGGCTaGAGTGGTGGGAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLPERNEPQDLPTSAKNFSGRSG*SGGSAS Trigger: CGAAGCGCTCCCACCACTGCAGCCGCTGCGGCCACT...GAAGTTTTTGGCACTCGTTGGAAGATCCTGTGGTTCATTCCTTTCAGGCAGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
||
| CDS-3UTR TCA 90 bp | GCGCAGAAAGAACATAGGAGCTTAATCCCTAGGAAATGGCCAACAGGTTTTTCTGATGGTCCATCCTCCTaGCGCAGTGGCCGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQKEHRSLIPRKWPTGFSDGPSS*RSGRSG Trigger: GCCGCTGCGGCCACTGCGTCAGGAGGATGGACCATC...AGAAAAACCTGTTGGCCATTTCCTAGGGATTAAGCTCCTATGTTCTTTCTGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAACGAGTGCCAAAAACTTCTGAGAAGGTCTGCTGCCATGGCTTTCGGGGCGAGATCCAAGGACAGTaGTGGTCCATCCTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: FQRVPKTSEKVCCHGFRGEIQGQ*WSILLT Trigger: CGTCAGGAGGATGGACCATCACTGTCCTTGGATCTC...GCCCCGAAAGCCATGGCAGCAGACCTTCTCAGAAGTTTTTGGCACTCGTTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
||
| CDS-3UTR GCA 90 bp | GCGCAGAAAGAACATAGGAGCTTAATCCCTAGGAAATGGCCAACAGGTTTTTCTAGTGGCCGCAGCGGCTaGAGTGGTGGGAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AQKEHRSLIPRKWPTGFSSGRSG*SGGSAS Trigger: CGAAGCGCTCCCACCACTGCAGCCGCTGCGGCCACT...AGAAAAACCTGTTGGCCATTTCCTAGGGATTAAGCTCCTATGTTCTTTCTGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCATCTGAGAAGGTCTGCTaGCATGGCTTTCGGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IKPVTHFQHGGPICAHHPSEKVC*HGFRGR Trigger: GCGGCCCCGAAAGCCATGGCAGCAGACCTTCTCAGA...TGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCACTGCACTTCTGAGAAGGTCTaGTGCCATGGCTTTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRRRKKGIRELLLARHCTSEKV*CHGFRG Trigger: GCCCCGAAAGCCATGGCAGCAGACCTTCTCAGAAGT...GCAGTGCCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR CCA 90 bp | AAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCATCTGTAGGGAACTCGCAGTaGTTGCCGCTGCCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVTHFQHGGPICAHHPSVGNSQ*LPLPER Trigger: CCTTTCAGGCAGCGGCAACCACTGCGAGTTCCCTAC...AGATGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGATGGTCCATCCTCCTaGCGCAGTGGCCGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSILIKPVTHFQHGGPICDGPSS*RSGRSG Trigger: GCCGCTGCGGCCACTGCGTCAGGAGGATGGACCATC...ACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR GCA 90 bp | AAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCATCTGGAACTCGCAGTGGTTaGCGCTGCCTGAAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KPVTHFQHGGPICAHHPSGTRSG*RCLKGM Trigger: CATTCCTTTCAGGCAGCGGCAACCACTGCGAGTTCC...AGATGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| 3UTR CAA 72 bp | GAGCCGGGGCAGCCCTCCCTCTGCTTTCTATCATATTaGCTCATCTATGCACACGAGCGTGTCACCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EPGQPSLCFLSY*LIYAHERVTFQ Trigger: TTGAAAGGTGACACGCTCGTGTGCATAGATGAGCAAATATGATAGAAAGCAGAGGGAGGGCTGCCCCGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CAA 72 bp | GACGTGATTGGCAAAGTGGTAGGGAACTCGCAGTGGTaGCCGCTGCCTGAAAGGAATGAACCACAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVIGKVVGNSQW*PLPERNEPQDL Trigger: AAGATCCTGTGGTTCATTCCTTTCAGGCAGCGGCAACCACTGCGAGTTCCCTACCACTTTGCCAATCACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
||
| CDS-3UTR GCA 90 bp | CATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCAGACAATCAAGCCCATaGAGCACCAACCATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKTCNAFPAWRTHLCPPSRQSSP*STNHAG Trigger: ACCCGCATGGTTGGTGCTGCATGGGCTTGATTGTCT...GGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR GCA 90 bp | CTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATACTTCTGAGAAGGTCTaGTGCCATGGCTTTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKPVTHFQHGGPICAHHTSEKV*CHGFRG Trigger: GCCCCGAAAGCCATGGCAGCAGACCTTCTCAGAAGT...ATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCACGCAGTGGTTGCCGCTaGCTGAAAGGAATGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKPVTHFQHGGPICAHHPRSGCR*LKGMNH Trigger: GTGGTTCATTCCTTTCAGGCAGCGGCAACCACTGCG...TGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR GCA 90 bp | CTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATGGAACTCGCAGTGGTTaGCGCTGCCTGAAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LIKPVTHFQHGGPICAHHGTRSG*RCLKGM Trigger: CATTCCTTTCAGGCAGCGGCAACCACTGCGAGTTCC...ATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
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| CDS-3UTR TCA 90 bp | CATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCTTTATCCAAGGACAGTaGTGGTCCATCCTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: HKTCNAFPAWRTHLCPPSFIQGQ*WSILLT Trigger: CGTCAGGAGGATGGACCATCACTGTCCTTGGATAAA...GGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGAGTGCCAAAAACTTCTaGGAAGGTCTGCTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVLRRRKKGIRELLLARSAKNF*EGLLPW Trigger: CCATGGCAGCAGACCTTCTCAGAAGTTTTTGGCACT...CCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAACCACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR CCA 90 bp | TCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCGAAGGTCTGCTGCCATaGCTTTCGGGGCCGCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SILIKPVTHFQHGGPICAEGLLP*LSGPRY Trigger: ATATCGCGGCCCCGAAAGCCATGGCAGCAGACCTTC...GGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| 3UTR CAA 72 bp | GAACTCCAGCATGGGGAAGGGATCACGCCCGTTACCTaGTGTCAGAGCTACTACTGCTCCAGAAGTATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELQHGEGITPVT*CQSYYCSRSIK Trigger: CTTTATACTTCTGGAGCAGTAGTAGCTCTGACACAAGGTAACGGGCGTGATCCCTTCCCCATGCTGGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTTCTGAGAAGGTCTGCTaGCATGGCTTTCGGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSILIKPVTHFQHGGPICSEKVC*HGFRGR Trigger: GCGGCCCCGAAAGCCATGGCAGCAGACCTTCTCAGA...ACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR TCA 90 bp | AGTGATGCGAATTACAAGTGGAAATTCAATTTCAACTTGGGTGATTACTGGTATGATGGTCCATCCTCCTaGCGCAGTGGCCGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDANYKWKFNFNLGDYWYDGPSS*RSGRSG Trigger: GCCGCTGCGGCCACTGCGTCAGGAGGATGGACCATC...ATACCAGTAATCACCCAAGTTGAAATTGAATTTCCACTTGTAATTCGCATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| CDS-3UTR CCA 90 bp | CTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCTGCATGTGGGATCTTaGGATTTTCAGGGAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIKPVTHFQHGGPICAHHLHVGS*DFQGVF Trigger: GAAGACTCCCTGAAAATCCCAAGATCCCACATGCAG...ATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCAGTGCCAAAAACTTCTaGGAAGGTCTGCTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SILIKPVTHFQHGGPICASAKNF*EGLLPW Trigger: CCATGGCAGCAGACCTTCTCAGAAGTTTTTGGCACT...GGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR GCA 90 bp | AAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCATCTGAAAGAAAACATCAGTaGGTAGCAAGTAAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPVTHFQHGGPICAHHPSERKHQ*VASKQL Trigger: GAGCTGCTTACTTGCTACGCACTGATGTTTTCTTTC...AGATGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTAGACAATCAAGCCCATaGAGCACCAACCATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSILIKPVTHFQHGGPICRQSSP*STNHAG Trigger: ACCCGCATGGTTGGTGCTGCATGGGCTTGATTGTCT...ACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCTGCATGTGGGATCTTaGGATTTTCAGGGAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SILIKPVTHFQHGGPICALHVGS*DFQGVF Trigger: GAAGACTCCCTGAAAATCCCAAGATCCCACATGCAG...GGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGAAGTAACTGGAATTATTGCAAACTTCCTACCCTCTTCAGTCATTAGAGAAGGTCTGCTGCCATaGCTTTCGGGGCCGCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LEEVTGIIANFLPSSVIREGLLP*LSGPRY Trigger: ATATCGCGGCCCCGAAAGCCATGGCAGCAGACCTTC...TCTAATGACTGAAGAGGGTAGGAAGTTTGCAATAATTCCAGTTACTTCTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR GCA 90 bp | TGGCCAACAGGTTTTTCTCTAGGAATCTTTAGAGTGATTACAAACCCCTCCGGGGAAAGAAAACATCAGTaGGTAGCAAGTAAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPTGFSLGIFRVITNPSGERKHQ*VASKQL Trigger: GAGCTGCTTACTTGCTACGCACTGATGTTTTCTTTC...CCCGGAGGGGTTTGTAATCACTCTAAAGATTCCTAGAGAAAAACCTGTTGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR GCA 90 bp | GCGCAGAAAGAACATAGGAGCTTAATCCCTAGGAAATGGCCAACAGGTTTTTCTGGATCTTCCAACGAGTaGCAAAAACTTCTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQKEHRSLIPRKWPTGFSGSSNE*QKLLRR Trigger: CCTTCTCAGAAGTTTTTGGCACTCGTTGGAAGATCC...AGAAAAACCTGTTGGCCATTTCCTAGGGATTAAGCTCCTATGTTCTTTCTGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR GCA 90 bp | CACATTATGATGCCTAAGATTGGTAGGTGGATTTTAATTGACTTGAAGACTGTCCGCAGTGGTTGCCGCTaGCTGAAAGGAATGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HIMMPKIGRWILIDLKTVRSGCR*LKGMNH Trigger: GTGGTTCATTCCTTTCAGGCAGCGGCAACCACTGCG...GACAGTCTTCAAGTCAATTAAAATCCACCTACCAATCTTAGGCATCATAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CAA 72 bp | CAGGGTCTTCCTAGGCACCCACAGTACACACCATTATaGAAACTCAAGCAGTGCTTTTCAATTAGGGATATG | + |
|
Preference number: 4 (lower is better) Translates to: QGLPRHPQYTPL*KLKQCFSIRDM Trigger: CATATCCCTAATTGAAAAGCACTGCTTGAGTTTCAATAATGGTGTGTACTGTGGGTGCCTAGGAAGACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR GCA 90 bp | AGTTCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGGATCTTCCAACGAGTaGCAAAAACTTCTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSILIKPVTHFQHGGPICGSSNE*QKLLRR Trigger: CCTTCTCAGAAGTTTTTGGCACTCGTTGGAAGATCC...ACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTATTCTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTTGCAGAAAGAGCCAATaGTTGTCTTCACCCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSILIKPVTHFQHGGPICCRKSQ*LSSPTQ Trigger: TTGTGTGGGTGAAGACAACCATTGGCTCTTTCTGCA...ACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAGAATAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR TCA 90 bp | AGTGATGCGAATTACAAGTGGAAATTCAATTTCAACTTGGGTGATTACTGGTATTTTATCCAAGGACAGTaGTGGTCCATCCTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SDANYKWKFNFNLGDYWYFIQGQ*WSILLT Trigger: CGTCAGGAGGATGGACCATCACTGTCCTTGGATAAA...ATACCAGTAATCACCCAAGTTGAAATTGAATTTCCACTTGTAATTCGCATCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR CCA 90 bp | AGTGATGCGAATTACAAGTGGAAATTCAATTTCAACTTGGGTGATTACTGGTATCTGCATGTGGGATCTTaGGATTTTCAGGGAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDANYKWKFNFNLGDYWYLHVGS*DFQGVF Trigger: GAAGACTCCCTGAAAATCCCAAGATCCCACATGCAG...ATACCAGTAATCACCCAAGTTGAAATTGAATTTCCACTTGTAATTCGCATCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| 3UTR CAA 72 bp | GTTTATACCCTGCCCCCACACAGAGGTACTAAATTCTaGACTTGTAATGTAAAATGGACCTATTATTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VYTLPPHRGTKF*TCNVKWTYYLP Trigger: GGGCAAATAATAGGTCCATTTTACATTACAAGTCAAGAATTTAGTACCTCTGTGTGGGGGCAGGGTATAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR CCA 90 bp | AGTGATGCGAATTACAAGTGGAAATTCAATTTCAACTTGGGTGATTACTGGTATTGCAGAAAGAGCCAATaGTTGTCTTCACCCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SDANYKWKFNFNLGDYWYCRKSQ*LSSPTQ Trigger: TTGTGTGGGTGAAGACAACCATTGGCTCTTTCTGCA...ATACCAGTAATCACCCAAGTTGAAATTGAATTTCCACTTGTAATTCGCATCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| 3UTR CAA 72 bp | AGTGATGCGAATTACAAGTGGAAATTCAATTTCAACTaGGGTGATTACTGGTATATAAATTTAGTGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDANYKWKFNFN*GDYWYINLVTH Trigger: GTGGGTCACTAAATTTATATACCAGTAATCACCCAAGTTGAAATTGAATTTCCACTTGTAATTCGCATCACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
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| CDS GCA 90 bp | GGCCGCAGCGGCTGCAGTGGTGGGAGCGCTTCGGCCTCATCAGGTTaGACTTGTTGCAGAGCTCCCACAGCTCCCGCTCTGCATGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRSGCSGGSASASSG*TCCRAPTAPALHVG Trigger: TCCCACATGCAGAGCGGGAGCTGTGGGAGCTCTGCAACAAGTGCAACCTGATGAGGCCGAAGCGCTCCCACCACTGCAGCCGCTGCGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCACTGCGGGAACTCGCAGTGGTaGCCGCTGCCTGAAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLRRRKKGIRELLLARHCGNSQW*PLPERN Trigger: ATTCCTTTCAGGCAGCGGCAACCACTGCGAGTTCCC...GCAGTGCCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS CCA 90 bp | ACTTGTTGCAGAGCTCCCACAGCTCCCGCTCTGCATGTGGGATCTTaGGATTTTCAGGGAGTCTTCCAGGATCAGTTAAGGAGGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TCCRAPTAPALHVGS*DFQGVFQDQLRRPS Trigger: TGAGGGCCTCCTTAACTGATCCTGGAAGACTCCCTGAAAATCCCAAGATCCCACATGCAGAGCGGGAGCTGTGGGAGCTCTGCAACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000139401.2 ENSMUST00000173741.8 |
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| CDS-3UTR CAA 90 bp | GTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCACTGCCTCATCAGGTTGCACTaGTTGCAGAGCTCCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLRRRKKGIRELLLARHCLIRLH*LQSSHS Trigger: GCTGTGGGAGCTCTGCAACAAGTGCAACCTGATGAG...GCAGTGCCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | CATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCGGGAACTCGCAGTGGTaGCCGCTGCCTGAAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HKTCNAFPAWRTHLCPPSGNSQW*PLPERN Trigger: ATTCCTTTCAGGCAGCGGCAACCACTGCGAGTTCCC...GGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGCTCATCAGGTTGCACTaGTTGCAGAGCTCCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVVLRRRKKGIRELLLARLIRLH*LQSSHS Trigger: GCTGTGGGAGCTCTGCAACAAGTGCAACCTGATGAG...CCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAACCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCAATCAGGTTGCACTTGTaGCAGAGCTCCCACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKPVTHFQHGGPICAHHPIRLHL*QSSHSS Trigger: GGAGCTGTGGGAGCTCTGCAACAAGTGCAACCTGAT...TGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | CTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCTCATCAGGTTGCACTaGTTGCAGAGCTCCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIKPVTHFQHGGPICAHHLIRLH*LQSSHS Trigger: GCTGTGGGAGCTCTGCAACAAGTGCAACCTGATGAG...ATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAACGAGTGCCAAAAACTTCTGAGAAGGTCTGCTGCCATGGCTTTCGGGGCTCTGCATGTGGGATCTaGGGATTTTCAGGGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FQRVPKTSEKVCCHGFRGSACGI*GFSGSL Trigger: AAGACTCCCTGAAAATCCCAAGATCCCACATGCAGA...GCCCCGAAAGCCATGGCAGCAGACCTTCTCAGAAGTTTTTGGCACTCGTTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCATCTCTGCATGTGGGATCTaGGGATTTTCAGGGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTCNAFPAWRTHLCPPSISACGI*GFSGSL Trigger: AAGACTCCCTGAAAATCCCAAGATCCCACATGCAGA...GATGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCATCTGCATGTGGGATCTaGGGATTTTCAGGGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IKPVTHFQHGGPICAHHPSACGI*GFSGSL Trigger: AAGACTCCCTGAAAATCCCAAGATCCCACATGCAGA...TGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGTTTTGAGAAGGAGAAAGAAGGGCATCAGAGAGCTGCTCCTAGCCAGGAGAAAGAGCCAATGGTaGTCTTCACCCACACAATTG | + |
|
Preference number: 5 (lower is better) Translates to: SVVLRRRKKGIRELLLARRKSQW*SSPTQL Trigger: CAATTGTGTGGGTGAAGACAACCATTGGCTCTTTCT...CCTGGCTAGGAGCAGCTCTCTGATGCCCTTCTTTCTCCTTCTCAAAACCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR CAA 90 bp | CTCATAAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATAGAAAGAGCCAATGGTaGTCTTCACCCACACAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LIKPVTHFQHGGPICAHHRKSQW*SSPTQL Trigger: CAATTGTGTGGGTGAAGACAACCATTGGCTCTTTCT...ATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCTGTAACGCATTTCCAGCATGGAGGACCCATCTGTGCCCACCATCCATCGATGATGCCAATCAGTaGTGTATAGAAGAGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KTCNAFPAWRTHLCPPSIDDANQ*CIEESS Trigger: ACTGGACTCTTCTATACACAACTGATTGGCATCATC...GATGGATGGTGGGCACAGATGGGTCCTCCATGCTGGAAATGCGTTACAGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTACTACTGCTCCAGAAGTATAAAGCAGTTTACAAAGCTCCACGCTGGGCTGATGATGCCAATCAGTaGTGTATAGAAGAGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELLLLQKYKAVYKAPRWADDANQ*CIEESS Trigger: ACTGGACTCTTCTATACACAACTGATTGGCATCATC...AGCCCAGCGTGGAGCTTTGTAAACTGCTTTATACTTCTGGAGCAGTAGTAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030110.15 |
||
| CDS-3UTR CAA 90 bp | CACATTATGATGCCTAAGATTGGTAGGTGGATTTTAATTGACTTGAAGACTGTCATCAGGTTGCACTTGTaGCAGAGCTCCCACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HIMMPKIGRWILIDLKTVIRLHL*QSSHSS Trigger: GGAGCTGTGGGAGCTCTGCAACAAGTGCAACCTGAT...GACAGTCTTCAAGTCAATTAAAATCCACCTACCAATCTTAGGCATCATAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030110.15 ENSMUST00000173741.8 |
||
| CDS CAA 90 bp | TGGCCGCAGCGGCTGCAGTGGTGGGAGCGCTTCGGCCTCATCAGGTaGCACTTGTTGCAGAGCTCCCACAGCTCCCGCTCTGCATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WPQRLQWWERFGLIR*HLLQSSHSSRSACG Trigger: CCCACATGCAGAGCGGGAGCTGTGGGAGCTCTGCAACAAGTGCAACCTGATGAGGCCGAAGCGCTCCCACCACTGCAGCCGCTGCGGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
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| CDS CCA 72 bp | TCCATCCTCCTGACGCAGTGGCCGCAGCGGCTGCAGTaGTGGGAGCGCTTCGGCCTCATCAGGTTGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: SILLTQWPQRLQ*WERFGLIRLHL Trigger: CAAGTGCAACCTGATGAGGCCGAAGCGCTCCCACCACTGCAGCCGCTGCGGCCACTGCGTCAGGAGGATGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000173741.8 |
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| CDS CAA 72 bp | TGGTGGGAGCGCTTCGGCCTCATCAGGTTGCACTTGTaGCAGAGCTCCCACAGCTCCCGCTCTGCATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WWERFGLIRLHL*QSSHSSRSACG Trigger: CCCACATGCAGAGCGGGAGCTGTGGGAGCTCTGCAACAAGTGCAACCTGATGAGGCCGAAGCGCTCCCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000139401.2 ENSMUST00000173741.8 |
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| CDS GCA 72 bp | GTTGCACTTGTTGCAGAGCTCCCACAGCTCCCGCTCTaGATGTGGGATCTTGGGATTTTCAGGGAGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VALVAELPQLPL*MWDLGIFRESS Trigger: GGAAGACTCCCTGAAAATCCCAAGATCCCACATGCAGAGCGGGAGCTGTGGGAGCTCTGCAACAAGTGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000139401.2 ENSMUST00000173741.8 |
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| CDS CCA 72 bp | CTTGTTGCAGAGCTCCCACAGCTCCCGCTCTGCATGTaGGATCTTGGGATTTTCAGGGAGTCTTCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: LVAELPQLPLCM*DLGIFRESSRI Trigger: GATCCTGGAAGACTCCCTGAAAATCCCAAGATCCCACATGCAGAGCGGGAGCTGTGGGAGCTCTGCAACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000139401.2 ENSMUST00000173741.8 |
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| CDS GCA 72 bp | CAATATTGTATAACCAGACAAAGACAATCAAGCCCATaGAGCACCAACCATGCGGGTCAACAACAAAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QYCITRQRQSSP*STNHAGQQQSE Trigger: TTCACTTTGTTGTTGACCCGCATGGTTGGTGCTGCATGGGCTTGATTGTCTTTGTCTGGTTATACAATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030110.15 ENSMUST00000107239.8 ENSMUST00000139401.2 ENSMUST00000173741.8 |
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