Pregenerated sensors for ZDHHC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039470Ensembl transcript IDs: ENSMUST00000049389.11, ENSMUST00000128166.8, ENSMUST00000167766.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCATCCACAGAACCGCACCCGCCTGGATCCCACAATGAATTGTaGGGATGTCTGCTCTCCCTAAACACTCTCAAAAGTTCGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: PSSTEPHPPGSHNEL*GCLLSLNTLKSSRP Trigger: TGGCCTCGAACTTTTGAGAGTGTTTAGGGAGAGCAGACATCCGCACAATTCATTGTGGGATCCAGGCGGGTGCGGTTCTGTGGATGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 90 bp | TTGTCAGATCCAACGCTCAAGCGTGAGAGACGAGGAAGCAATCATTaGCCTCATCCACAGAACCGCACCCGCCTGGATCCCACAATGAAT | + |
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Preference number: 1 (lower is better) Translates to: LSDPTLKRERRGSNH*PHPQNRTRLDPTMN Trigger: ATTCATTGTGGGATCCAGGCGGGTGCGGTTCTGTGGATGAGGGCAATGATTGCTTCCTCGTCTCTCACGCTTGAGCGTTGGATCTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR TCA 90 bp | ATCATTGCCCTCATCCACAGAACCGCACCCGCCTGGATCCCACAATaGATTGTGCGGATGTCTGCTCTCCCTAAACACTCTCAAAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: IIALIHRTAPAWIPQ*IVRMSALPKHSQKF Trigger: GAACTTTTGAGAGTGTTTAGGGAGAGCAGACATCCGCACAATTCATTGTGGGATCCAGGCGGGTGCGGTTCTGTGGATGAGGGCAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 90 bp | ATTTGCATATCTAGTCAAAGGGATATAGGGACAATTGGCAAATGGTaGCTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTA | + |
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Preference number: 1 (lower is better) Translates to: ICISSQRDIGTIGKW*LPIGRLFHSSTALV Trigger: TACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCTTTGACTAGATATGCAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR CCA 90 bp | AAAATTTGCATATCTAGTCAAAGGGATATAGGGACAATTGGCAAATaGTGCCTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTG | + |
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Preference number: 1 (lower is better) Translates to: KICISSQRDIGTIGK*CLPIGRLFHSSTAL Trigger: CAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR GCA 90 bp | ATGCCTAATAGACTCCTGCCCTGGAAAACAGATAAGGGAGCAATGTaGTATCAGAAAATCTGCTGCATAGATCTTCAAATACACCACATG | + |
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Preference number: 1 (lower is better) Translates to: MPNRLLPWKTDKGAM*YQKICCIDLQIHHM Trigger: CATGTGGTGTATTTGAAGATCTATGCAGCAGATTTTCTGATAGCACATTGCTCCCTTATCTGTTTTCCAGGGCAGGAGTCTATTAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 90 bp | CTCTTCATACTGCTGTGTTTGATCCCCATCACTGAAGACAAAATTTaGATATCTAGTCAAAGGGATATAGGGACAATTGGCAAATGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LFILLCLIPITEDKI*ISSQRDIGTIGKWC Trigger: GCACCATTTGCCAATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGGGATCAAACACAGCAGTATGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR TCA 90 bp | AGTTTTTATCCAATTGCTTTGAACTCGAGCTTCAGTATTTGTATTTaGATCTTCCAATGGGAGACAAAGTCTAGAATGGGAATTGAAACC | + |
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Preference number: 1 (lower is better) Translates to: SFYPIALNSSFSICI*IFQWETKSRMGIET Trigger: GGTTTCAATTCCCATTCTAGACTTTGTCTCCCATTGGAAGATTCAAATACAAATACTGAAGCTCGAGTTCAAAGCAATTGGATAAAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR CCA 90 bp | AATTGTAGTTTTGATGAAAAGACAGAGATGATACACAGGTGCACATaGAGGAATAATCCATTGATCTATCAGAAATGCTTAGAAACTCAG | + |
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Preference number: 1 (lower is better) Translates to: NCSFDEKTEMIHRCT*RNNPLIYQKCLETQ Trigger: CTGAGTTTCTAAGCATTTCTGATAGATCAATGGATTATTCCTCCATGTGCACCTGTGTATCATCTCTGTCTTTTCATCAAAACTACAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR CAA 90 bp | TTGCCCTCATCCACAGAACCGCACCCGCCTGGATCCCACAATGAATaGTGCGGATGTCTGCTCTCCCTAAACACTCTCAAAAGTTCGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPSSTEPHPPGSHNE*CGCLLSLNTLKSSR Trigger: CCTCGAACTTTTGAGAGTGTTTAGGGAGAGCAGACATCCGCACAATTCATTGTGGGATCCAGGCGGGTGCGGTTCTGTGGATGAGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR CAA 90 bp | AGGGATATAGGGACAATTGGCAAATGGTGCCTTCCAATCGGAAGGTaGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RDIGTIGKWCLPIGR*FHSSTALVLYKSGF Trigger: AAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR-3UTR CCA 90 bp | AAACACTCTCAAAAGTTCGAGGCCAGCATGGTCTACAGAGTGAGTTCCAGGACAAGACAAAGTCTAGAATaGGAATTGAAACCTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: KHSQKFEASMVYRVSSRTRQSLE*ELKPGT Trigger: TGTGCCAGGTTTCAATTCCCATTCTAGACTTTGTCT...TGTCCTGGAACTCACTCTGTAGACCATGCTGGCCTCGAACTTTTGAGAGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCACAATTGGCAAATGGTaGCTTCCAATCGGAAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: KHQFGDYLKLFILLCLIPTIGKW*LPIGRL Trigger: CAACCTTCCGATTGGAAGGCACCATTTGCCAATTGT...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCGGATATAGGGACAATTaGCAAATGGTGCCTTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: KHQFGDYLKLFILLCLIPGYRDN*QMVPSN Trigger: ATTGGAAGGCACCATTTGCCAATTGTCCCTATATCC...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR CAA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTaGATCCCCATCACTGAAGACAAAATTTGCATATCTAGTCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KHQFGDYLKLFILLC*IPITEDKICISSQR Trigger: CCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR GCA 72 bp | CCAACGCTCAAGCGTGAGAGACGAGGAAGCAATCATTaGCCTCATCCACAGAACCGCACCCGCCTGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: PTLKRERRGSNH*PHPQNRTRLDP Trigger: GGGATCCAGGCGGGTGCGGTTCTGTGGATGAGGGCAATGATTGCTTCCTCGTCTCTCACGCTTGAGCGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 72 bp | ACAGAACCGCACCCGCCTGGATCCCACAATGAATTGTaGGGATGTCTGCTCTCCCTAAACACTCTCAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: TEPHPPGSHNEL*GCLLSLNTLKS Trigger: ACTTTTGAGAGTGTTTAGGGAGAGCAGACATCCGCACAATTCATTGTGGGATCCAGGCGGGTGCGGTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 72 bp | TCTAGTCAAAGGGATATAGGGACAATTGGCAAATGGTaGCTTCCAATCGGAAGGTTGTTCCATTCCTCCACA | + |
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Preference number: 3 (lower is better) Translates to: SSQRDIGTIGKW*LPIGRLFHSST Trigger: TGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCTTTGACTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR GCA 72 bp | ACAGATAAGGGAGCAATGTGCTATCAGAAAATCTGCTaGATAGATCTTCAAATACACCACATGCTGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: TDKGAMCYQKIC*IDLQIHHMLLP Trigger: GGGCAGCAGCATGTGGTGTATTTGAAGATCTATGCAGCAGATTTTCTGATAGCACATTGCTCCCTTATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR CCA 72 bp | ATATCTAGTCAAAGGGATATAGGGACAATTGGCAAATaGTGCCTTCCAATCGGAAGGTTGTTCCATTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: ISSQRDIGTIGK*CLPIGRLFHSS Trigger: GGAGGAATGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCTTTGACTAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR GCA 72 bp | TACCACTTTGATAAAAGGACATGCCTAATAGACTCCTaGCCTGGAAAACAGATAAGGGAGCAATGTGCTATC | + |
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Preference number: 3 (lower is better) Translates to: YHFDKRTCLIDS*PGKQIREQCAI Trigger: GATAGCACATTGCTCCCTTATCTGTTTTCCAGGGCAGGAGTCTATTAGGCATGTCCTTTTATCAAAGTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 72 bp | ACAGATTGGTTAACATCCAAACCAGCAAAAGAGTGTTaGCAGGCAATCTTCAAGAGAATTAGCATGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TDWLTSKPAKEC*QAIFKRISMCS Trigger: GGAACACATGCTAATTCTCTTGAAGATTGCCTGGCAACACTCTTTTGCTGGTTTGGATGTTAACCAATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 72 bp | AGACTCCTGCCCTGGAAAACAGATAAGGGAGCAATGTaGTATCAGAAAATCTGCTGCATAGATCTTCAAATA | + |
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Preference number: 3 (lower is better) Translates to: RLLPWKTDKGAM*YQKICCIDLQI Trigger: TATTTGAAGATCTATGCAGCAGATTTTCTGATAGCACATTGCTCCCTTATCTGTTTTCCAGGGCAGGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR TCA 72 bp | CCAATTGCTTTGAACTCGAGCTTCAGTATTTGTATTTaGATCTTCCAATGGGAGACAAAGTCTAGAATGGGA | + |
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Preference number: 3 (lower is better) Translates to: PIALNSSFSICI*IFQWETKSRMG Trigger: TCCCATTCTAGACTTTGTCTCCCATTGGAAGATTCAAATACAAATACTGAAGCTCGAGTTCAAAGCAATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR TCA 72 bp | GATTATGAGATAAGTTGTACAACCCAATTATTCGAATaGACATGGGCCCATAAACTTAATCTCGGGTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: DYEISCTTQLFE*TWAHKLNLGFW Trigger: CCAAAACCCGAGATTAAGTTTATGGGCCCATGTTCATTCGAATAATTGGGTTGTACAACTTATCTCATAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR TCA 72 bp | TTTGTAAATAGTGCATACAAGGCACAAGAACTTCTGTaGGTATACTTACTGAGGCCAAACATTTTGGCATCA | + |
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Preference number: 3 (lower is better) Translates to: FVNSAYKAQELL*VYLLRPNILAS Trigger: TGATGCCAAAATGTTTGGCCTCAGTAAGTATACTCACAGAAGTTCTTGTGCCTTGTATGCACTATTTACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 72 bp | TGCACATGGAGGAATAATCCATTGATCTATCAGAAATaGTTAGAAACTCAGTCTTTTCACAATAACACTGAG | + |
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Preference number: 3 (lower is better) Translates to: CTWRNNPLIYQK*LETQSFHNNTE Trigger: CTCAGTGTTATTGTGAAAAGACTGAGTTTCTAAGCATTTCTGATAGATCAATGGATTATTCCTCCATGTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR GCA 72 bp | TGTAGTTTTGATGAAAAGACAGAGATGATACACAGGTaGACATGGAGGAATAATCCATTGATCTATCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: CSFDEKTEMIHR*TWRNNPLIYQK Trigger: TTTCTGATAGATCAATGGATTATTCCTCCATGTGCACCTGTGTATCATCTCTGTCTTTTCATCAAAACTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| 3UTR CCA 72 bp | TTTGATGAAAAGACAGAGATGATACACAGGTGCACATaGAGGAATAATCCATTGATCTATCAGAAATGCTTA | + |
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Preference number: 3 (lower is better) Translates to: FDEKTEMIHRCT*RNNPLIYQKCL Trigger: TAAGCATTTCTGATAGATCAATGGATTATTCCTCCATGTGCACCTGTGTATCATCTCTGTCTTTTCATCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| CDS-3UTR GCA 90 bp | AAACACTCTCAAAAGTTCGAGGCCAGCATGGTCTACAGAGTGAGTTCCAGGACAGGGAAGGTCTTTGGCTaGTCGCCTCAGAACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KHSQKFEASMVYRVSSRTGKVFG*SPQNFL Trigger: CAGGAAGTTCTGAGGCGAGCAGCCAAAGACCTTCCC...TGTCCTGGAACTCACTCTGTAGACCATGCTGGCCTCGAACTTTTGAGAGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| CDS-3UTR CCA 90 bp | AAACACTCTCAAAAGTTCGAGGCCAGCATGGTCTACAGAGTGAGTTCCAGGACACGCCGGACATGGTCCTaGTGTAGATGGGAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KHSQKFEASMVYRVSSRTRRTWS*CRWEGL Trigger: AAGACCTTCCCATCTACACCAGGACCATGTCCGGCG...TGTCCTGGAACTCACTCTGTAGACCATGCTGGCCTCGAACTTTTGAGAGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
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| CDS-3UTR CCA 90 bp | TTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGCTATGCACAGCTGGATaGCGTAGGCGTAGTAGGACC | + |
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Preference number: 4 (lower is better) Translates to: FQSEGCSIPPQHWYFTRVLCTAG*RRRSRT Trigger: GGTCCTACTACGCCTACGCCATCCAGCTGTGCATAG...CACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | CTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTCGCCGGACATGGTCCTaGTGTAGATGGGAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPIGRLFHSSTALVLYKSRRTWS*CRWEGL Trigger: AAGACCTTCCCATCTACACCAGGACCATGTCCGGCG...ACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | CGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTTATCTATGCACAGCTGGATaGCGTAGGCGTAGTAGGACC | + |
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Preference number: 4 (lower is better) Translates to: RKVVPFLHSTGTLQEWFYLCTAG*RRRSRT Trigger: GGTCCTACTACGCCTACGCCATCCAGCTGTGCATAG...ATAAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCCTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACTTAAGGAGATGGCTCTaGGACTCTCTCAGAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: WCLPIGRLFHSSTALVLYLRRWL*DSLRGF Trigger: AAAGCCTCTGAGAGAGTCCCAGAGCCATCTCCTTAA...GTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| 3UTR CAA 72 bp | GGGACAATTGGCAAATGGTGCCTTCCAATCGGAAGGTaGTTCCATTCCTCCACAGCACTGGTACTTTACAAG | + |
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Preference number: 4 (lower is better) Translates to: GTIGKWCLPIGR*FHSSTALVLYK Trigger: CTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR TCA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCCGCCTCAGAACTTCCTaGTGGGCTTCTCCTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KHQFGDYLKLFILLCLIPRLRTS*WASPLG Trigger: GCCAAGAGGAGAAGCCCATCAGGAAGTTCTGAGGCG...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR TCA 90 bp | TTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGCTCTCTGTCCAGGTCTaGGAATCCTTAAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: FQSEGCSIPPQHWYFTRVLSVQV*ESLRRW Trigger: CCATCTCCTTAAGGATTCTCAGACCTGGACAGAGAG...CACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR GCA 90 bp | CTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTTTTCCATGGACACTATaGACAGCTGGATGGCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LPIGRLFHSSTALVLYKSFPWTL*TAGWRR Trigger: CCTACGCCATCCAGCTGTGCATAGTGTCCATGGAAA...ACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | TTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGAGATGGGAAGGTCTTTaGCTGCTCGCCTCAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: FQSEGCSIPPQHWYFTRVRWEGL*LLASEL Trigger: AAGTTCTGAGGCGAGCAGCCAAAGACCTTCCCATCT...CACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR TCA 90 bp | CCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTTATTTTGATTGTAGACGCCTCAGAACTTCCTaGTGGGCTTCTCCTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PFLHSTGTLQEWFYFDCRRLRTS*WASPLG Trigger: GCCAAGAGGAGAAGCCCATCAGGAAGTTCTGAGGCG...TCTACAATCAAAATAAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR GCA 90 bp | TTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGCTCTCTCAGAGGCTTTaGAGGAAACTGGTGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: FQSEGCSIPPQHWYFTRVLSQRL*RKLVVF Trigger: GAAAACCACCAGTTTCCTGCAAAGCCTCTGAGAGAG...CACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | AAGGGATATAGGGACAATTGGCAAATGGTGCCTTCCAATCGGAAGGTTGTTCCAGAATCCTTAAGGAGATaGCTCTGGGACTCTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KGYRDNWQMVPSNRKVVPESLRR*LWDSLR Trigger: TCTGAGAGAGTCCCAGAGCCATCTCCTTAAGGATTC...TGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | CTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTCACCAATGTTTTCCATaGACACTATGCACAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LPIGRLFHSSTALVLYKSHQCFP*TLCTAG Trigger: TCCAGCTGTGCATAGTGTCCATGGAAAACATTGGTG...ACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCTGGTCCTGGTGTAGATaGGAAGGTCTTTGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KHQFGDYLKLFILLCLIPWSWCR*EGLWLL Trigger: GAGCAGCCAAAGACCTTCCCATCTACACCAGGACCA...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCCTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACATGATGACAGCGGTCTaGTTTTATAAGTTGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: WCLPIGRLFHSSTALVLYMMTAV*FYKLAS Trigger: AGATGCCAACTTATAAAACCAGACCGCTGTCATCAT...GTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
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| CDS-3UTR GCA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCTTTCCATGGACACTATaGACAGCTGGATGGCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHQFGDYLKLFILLCLIPFPWTL*TAGWRR Trigger: CCTACGCCATCCAGCTGTGCATAGTGTCCATGGAAA...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACTCTGGTTTTATAAGTTaGCATCTGTCACAATATCGG | + |
|
Preference number: 4 (lower is better) Translates to: WCLPIGRLFHSSTALVLYSGFIS*HLSQYR Trigger: CCGATATTGTGACAGATGCCAACTTATAAAACCAGA...GTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTTATTTTGATTGTAGACTCTCTGTCCAGGTCTaGGAATCCTTAAGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLHSTGTLQEWFYFDCRLSVQV*ESLRRW Trigger: CCATCTCCTTAAGGATTCTCAGACCTGGACAGAGAG...TCTACAATCAAAATAAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCACTGAAGACAAAATTTGCATATCTAGTCAAAGGGATATAGGGACAATTTGGTCCTGGTGTAGATaGGAAGGTCTTTGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PITEDKICISSQRDIGTIWSWCR*EGLWLL Trigger: GAGCAGCCAAAGACCTTCCCATCTACACCAGGACCA...AATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTATGATGACAGCGGTCTaGTTTTATAAGTTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPIGRLFHSSTALVLYKSMMTAV*FYKLAS Trigger: AGATGCCAACTTATAAAACCAGACCGCTGTCATCAT...ACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTTATTTTGATTGTAGAGAATCCTTAAGGAGATaGCTCTGGGACTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PFLHSTGTLQEWFYFDCRESLRR*LWDSLR Trigger: TCTGAGAGAGTCCCAGAGCCATCTCCTTAAGGATTC...TCTACAATCAAAATAAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCACTGAAGACAAAATTTGCATATCTAGTCAAAGGGATATAGGGACAATTCTCTCTCAGAGGCTTTaGAGGAAACTGGTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PITEDKICISSQRDIGTILSQRL*RKLVVF Trigger: GAAAACCACCAGTTTCCTGCAAAGCCTCTGAGAGAG...AATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTTATTTTGATTGTAGACACCAATGTTTTCCATaGACACTATGCACAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFLHSTGTLQEWFYFDCRHQCFP*TLCTAG Trigger: TCCAGCTGTGCATAGTGTCCATGGAAAACATTGGTG...TCTACAATCAAAATAAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CCA 90 bp | AAAACAGATTGGTTAACATCCAAACCAGCAAAAGAGTGTTGCCAGGCAATCTTCGGCTTTGCAGGAAACTaGTGGTTTTCAGGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTDWLTSKPAKECCQAIFGFAGN*WFSGFF Trigger: GAAAAATCCTGAAAACCACCAGTTTCCTGCAAAGCC...GAAGATTGCCTGGCAACACTCTTTTGCTGGTTTGGATGTTAACCAATCTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
||
| CDS-3UTR CCA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCGGCTTTGCAGGAAACTaGTGGTTTTCAGGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHQFGDYLKLFILLCLIPGFAGN*WFSGFF Trigger: GAAAAATCCTGAAAACCACCAGTTTCCTGCAAAGCC...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCACTGAAGACAAAATTTGCATATCTAGTCAAAGGGATATAGGGACAATTTTAAGGAGATGGCTCTaGGACTCTCTCAGAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PITEDKICISSQRDIGTILRRWL*DSLRGF Trigger: AAAGCCTCTGAGAGAGTCCCAGAGCCATCTCCTTAA...AATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCACTTCCGGTAATGACAAATGATCAAAACATGCTTAAAGACAAAGGGGAGCAGCAATTCTTTCTCTaGATAAGAGAGATGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LALPVMTNDQNMLKDKGEQQFFL*IREMEF Trigger: GAATTCCATCTCTCTTATGCAGAGAAAGAATTGCTG...CTCCCCTTTGTCTTTAAGCATGTTTTGATCATTTGTCATTACCGGAAGTGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
||
| CDS-3UTR GCA 90 bp | CCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTTATTTTGATTGTAGACAGCAATTCTTTCTCTaGATAAGAGAGATGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLHSTGTLQEWFYFDCRQQFFL*IREMEF Trigger: GAATTCCATCTCTCTTATGCAGAGAAAGAATTGCTG...TCTACAATCAAAATAAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| 3UTR CAA 72 bp | GAGATGATACACAGGTGCACATGGAGGAATAATCCATaGATCTATCAGAAATGCTTAGAAACTCAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EMIHRCTWRNNP*IYQKCLETQSF Trigger: AAAAGACTGAGTTTCTAAGCATTTCTGATAGATCAATGGATTATTCCTCCATGTGCACCTGTGTATCATCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
||
| CDS-3UTR CCA 90 bp | CCCATCACTGAAGACAAAATTTGCATATCTAGTCAAAGGGATATAGGGACAATTTCTGGTTTTATAAGTTaGCATCTGTCACAATATCGG | + |
|
Preference number: 4 (lower is better) Translates to: PITEDKICISSQRDIGTISGFIS*HLSQYR Trigger: CCGATATTGTGACAGATGCCAACTTATAAAACCAGA...AATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS GCA 90 bp | GATTGCGCCGGACATGGTCCTGGTGTAGATGGGAAGGTCTTTGGCTaGTCGCCTCAGAACTTCCTGATGGGCTTCTCCTCTTGGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DCAGHGPGVDGKVFG*SPQNFLMGFSSWLS Trigger: AGAGAGCCAAGAGGAGAAGCCCATCAGGAAGTTCTGAGGCGAGCAGCCAAAGACCTTCCCATCTACACCAGGACCATGTCCGGCGCAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS CCA 90 bp | ATCGGATTGCGCCGGACATGGTCCTGGTGTAGATGGGAAGGTCTTTaGCTGCTCGCCTCAGAACTTCCTGATGGGCTTCTCCTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGLRRTWSWCRWEGL*LLASELPDGLLLLA Trigger: AGCCAAGAGGAGAAGCCCATCAGGAAGTTCTGAGGCGAGCAGCCAAAGACCTTCCCATCTACACCAGGACCATGTCCGGCGCAATCCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS CCA 90 bp | ATCTGTCACAATATCGGATTGCGCCGGACATGGTCCTGGTGTAGATaGGAAGGTCTTTGGCTGCTCGCCTCAGAACTTCCTGATGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ICHNIGLRRTWSWCR*EGLWLLASELPDGL Trigger: AAGCCCATCAGGAAGTTCTGAGGCGAGCAGCCAAAGACCTTCCCATCTACACCAGGACCATGTCCGGCGCAATCCGATATTGTGACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCCTTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACCGCAGGAGTAGAAGGTaGTTCAGGATCCTGGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: WCLPIGRLFHSSTALVLYRRSRR*FRILVN Trigger: GTTAACCAGGATCCTGAACAACCTTCTACTCCTGCG...GTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAAGGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGCGCAGGAGTAGAAGGTaGTTCAGGATCCTGGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FQSEGCSIPPQHWYFTRVRRSRR*FRILVN Trigger: GTTAACCAGGATCCTGAACAACCTTCTACTCCTGCG...CACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | AAACACTCTCAAAAGTTCGAGGCCAGCATGGTCTACAGAGTGAGTTCCAGGACACATGAGGCACACAACTaGTTCACCAATGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KHSQKFEASMVYRVSSRTHEAHN*FTNVFH Trigger: ATGGAAAACATTGGTGAACAAGTTGTGTGCCTCATG...TGTCCTGGAACTCACTCTGTAGACCATGCTGGCCTCGAACTTTTGAGAGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
||
| CDS-3UTR CAA 90 bp | TTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGAGCCATCACCTTGACTaGAAAATACTGGTAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQSEGCSIPPQHWYFTRVSHHLD*KILVTA Trigger: GGCTGTTACCAGTATTTTCAAGTCAAGGTGATGGCT...CACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGATATAGGGACAATTGGCAAATGGTGCCTTCCAATCGGAAGGTTGTTCCACAGGATTTTTCACTGTaGAATTTAGTCCCGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KGYRDNWQMVPSNRKVVPQDFSL*NLVPQE Trigger: CTCCTGCGGGACTAAATTCAACAGTGAAAAATCCTG...TGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGATATAGGGACAATTGGCAAATGGTGCCTTCCAATCGGAAGGTTGTTCCACATGAGGCACACAACTaGTTCACCAATGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KGYRDNWQMVPSNRKVVPHEAHN*FTNVFH Trigger: ATGGAAAACATTGGTGAACAAGTTGTGTGCCTCATG...TGGAACAACCTTCCGATTGGAAGGCACCATTTGCCAATTGTCCCTATATCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAATCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGAGAGATGGAATTCTTTaGAAGGATTCATGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FQSEGCSIPPQHWYFTRVRDGIL*KDSWAM Trigger: CATTGCCCATGAATCCTTCAAAAGAATTCCATCTCT...CACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGATTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | TCGGAAGGTTGTTCCATTCCTCCACAGCACTGGTACTTTACAAGAGTGGTTTTAAATATGGAACTTGGCTaGAGTATCAGGCAGACCATT | + |
|
Preference number: 5 (lower is better) Translates to: SEGCSIPPQHWYFTRVVLNMELG*SIRQTI Trigger: AATGGTCTGCCTGATACTCAAGCCAAGTTCCATATT...TAAAACCACTCTTGTAAAGTACCAGTGCTGTGGAGGAATGGAACAACCTTCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS CCA 90 bp | CTTCAAAATACATTTATCACAGACGGAACAATGATGACAGCGGTCTaGTTTTATAAGTTGGCATCTGTCACAATATCGGATTGCGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQNTFITDGTMMTAV*FYKLASVTISDCAG Trigger: TCCGGCGCAATCCGATATTGTGACAGATGCCAACTTATAAAACCAGACCGCTGTCATCATTGTTCCGTCTGTGATAAATGTATTTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCCAGGATTTTTCACTGTaGAATTTAGTCCCGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KHQFGDYLKLFILLCLIPQDFSL*NLVPQE Trigger: CTCCTGCGGGACTAAATTCAACAGTGAAAAATCCTG...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAGATTGGTTAACATCCAAACCAGCAAAAGAGTGTTGCCAGGCAATCTTCAATATGGAACTTGGCTaGAGTATCAGGCAGACCATT | + |
|
Preference number: 5 (lower is better) Translates to: KTDWLTSKPAKECCQAIFNMELG*SIRQTI Trigger: AATGGTCTGCCTGATACTCAAGCCAAGTTCCATATT...GAAGATTGCCTGGCAACACTCTTTTGCTGGTTTGGATGTTAACCAATCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049389.11 |
||
| CDS-3UTR CAA 90 bp | AAGCATCAGTTTGGTGATTACTTGAAACTCTTCATACTGCTGTGTTTGATCCCCAGAGATGGAATTCTTTaGAAGGATTCATGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KHQFGDYLKLFILLCLIPRDGIL*KDSWAM Trigger: CATTGCCCATGAATCCTTCAAAAGAATTCCATCTCT...GGGGATCAAACACAGCAGTATGAAGAGTTTCAAGTAATCACCAAACTGATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCACTGAAGACAAAATTTGCATATCTAGTCAAAGGGATATAGGGACAATTAGCCATCACCTTGACTaGAAAATACTGGTAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PITEDKICISSQRDIGTISHHLD*KILVTA Trigger: GGCTGTTACCAGTATTTTCAAGTCAAGGTGATGGCT...AATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCACTGAAGACAAAATTTGCATATCTAGTCAAAGGGATATAGGGACAATTGTCTGGTTTTATAAGTaGGCATCTGTCACAATATCG | + |
|
Preference number: 5 (lower is better) Translates to: PITEDKICISSQRDIGTIVWFYK*ASVTIS Trigger: CGATATTGTGACAGATGCCAACTTATAAAACCAGAC...AATTGTCCCTATATCCCTTTGACTAGATATGCAAATTTTGTCTTCAGTGATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049389.11 ENSMUST00000167766.2 |
||
| CDS CCA 72 bp | CGCCGGACATGGTCCTGGTGTAGATGGGAAGGTCTTTaGCTGCTCGCCTCAGAACTTCCTGATGGGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRTWSWCRWEGL*LLASELPDGLL Trigger: GAGAAGCCCATCAGGAAGTTCTGAGGCGAGCAGCCAAAGACCTTCCCATCTACACCAGGACCATGTCCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS GCA 72 bp | GGACATGGTCCTGGTGTAGATGGGAAGGTCTTTGGCTaGTCGCCTCAGAACTTCCTGATGGGCTTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GHGPGVDGKVFG*SPQNFLMGFSS Trigger: AGAGGAGAAGCCCATCAGGAAGTTCTGAGGCGAGCAGCCAAAGACCTTCCCATCTACACCAGGACCATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS GCA 72 bp | AGGGTTGCTCATACCGGCTTTGCCCTTCCCAGGGTTTaGGCTGCTCTCTGTCCAGGTCTGAGAATCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: RVAHTGFALPRV*AALCPGLRILK Trigger: CTTAAGGATTCTCAGACCTGGACAGAGAGCAGCGCAAACCCTGGGAAGGGCAAAGCCGGTATGAGCAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS CCA 72 bp | CACCAATGTTTTCCATGGACACTATGCACAGCTGGATaGCGTAGGCGTAGTAGGACCAGCCCAGCAGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HQCFPWTLCTAG*RRRSRTSPAAS Trigger: GCTTGCTGCTGGGCTGGTCCTACTACGCCTACGCCATCCAGCTGTGCATAGTGTCCATGGAAAACATTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS CCA 72 bp | AATATCGGATTGCGCCGGACATGGTCCTGGTGTAGATaGGAAGGTCTTTGGCTGCTCGCCTCAGAACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NIGLRRTWSWCR*EGLWLLASELP Trigger: AGGAAGTTCTGAGGCGAGCAGCCAAAGACCTTCCCATCTACACCAGGACCATGTCCGGCGCAATCCGATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS CAA 72 bp | TTCTCCATAGTTAATGCAGGGTTGCTCATACCGGCTTaGCCCTTCCCAGGGTTTGCGCTGCTCTCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSIVNAGLLIPA*PFPGFALLSVQ Trigger: CTGGACAGAGAGCAGCGCAAACCCTGGGAAGGGCAAAGCCGGTATGAGCAACCCTGCATTAACTATGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS CAA 72 bp | GACGGAACAATGATGACAGCGGTCTGGTTTTATAAGTaGGCATCTGTCACAATATCGGATTGCGCCGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: DGTMMTAVWFYK*ASVTISDCAGH Trigger: ATGTCCGGCGCAATCCGATATTGTGACAGATGCCAACTTATAAAACCAGACCGCTGTCATCATTGTTCCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||
| CDS CCA 72 bp | ACATTTATCACAGACGGAACAATGATGACAGCGGTCTaGTTTTATAAGTTGGCATCTGTCACAATATCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TFITDGTMMTAV*FYKLASVTISD Trigger: ATCCGATATTGTGACAGATGCCAACTTATAAAACCAGACCGCTGTCATCATTGTTCCGTCTGTGATAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049389.11 ENSMUST00000128166.8 ENSMUST00000167766.2 |
||